Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCTCTACCTAGTGGAAGTTCTTAACTTCGTCCGCTTCTTGGAAACACGTATTCAAATTTTTTTTGAGAAAGTCGACGTTATTGATGTGGTAACTGGACGCCTCAACGAATTATCCATAAAAGAACTGTTGACGAGAGTCGACACTTTAAAGGCAAAAGCTGCAAGAACTGAAAACTACGAGTGTGGGGACAGTTCAACGGACTCTGTTGCCCATATAGAAGAGTGTGTTGGCGAGCTAGATAGCTCCCAAAAGACGATTGTGGAGATGAAAAACGACATGTCAGAAGTTTTTCATGTTGCATTCAGTGTCGTTAGGAATGAGATTGCAGACGTGAGCATGAGGGTGAACCTCACGATGCACACCATGACAAATCAAGCTTCAGTTGGAGGAGCGATCCAAGTTAACAGAATAAAGATCCTCGAACCCAAGCCCTTCTGTGGGGGCAAGGGATCCAAAAGCCTTGGAAAATTACATCTTTGA
mRNA sequence
ATGCTCTACCTAGTGGAAGTTCTTAACTTCGTCCGCTTCTTGGAAACACGTATTCAAATTTTTTTTGAGAAAGTCGACGTTATTGATGTGGTAACTGGACGCCTCAACGAATTATCCATAAAAGAACTGTTGACGAGAGTCGACACTTTAAAGGCAAAAGCTGCAAGAACTGAAAACTACGAGTGTGGGGACAGTTCAACGGACTCTGTTGCCCATATAGAAGAGTGTGTTGGCGAGCTAGATAGCTCCCAAAAGACGATTGTGGAGATGAAAAACGACATGTCAGAAGTTTTTCATGTTGCATTCAGTGTCGTTAGGAATGAGATTGCAGACGTGAGCATGAGGGTGAACCTCACGATGCACACCATGACAAATCAAGCTTCAGTTGGAGGAGCGATCCAAGTTAACAGAATAAAGATCCTCGAACCCAAGCCCTTCTGTGGGGGCAAGGGATCCAAAAGCCTTGGAAAATTACATCTTTGA
Coding sequence (CDS)
ATGCTCTACCTAGTGGAAGTTCTTAACTTCGTCCGCTTCTTGGAAACACGTATTCAAATTTTTTTTGAGAAAGTCGACGTTATTGATGTGGTAACTGGACGCCTCAACGAATTATCCATAAAAGAACTGTTGACGAGAGTCGACACTTTAAAGGCAAAAGCTGCAAGAACTGAAAACTACGAGTGTGGGGACAGTTCAACGGACTCTGTTGCCCATATAGAAGAGTGTGTTGGCGAGCTAGATAGCTCCCAAAAGACGATTGTGGAGATGAAAAACGACATGTCAGAAGTTTTTCATGTTGCATTCAGTGTCGTTAGGAATGAGATTGCAGACGTGAGCATGAGGGTGAACCTCACGATGCACACCATGACAAATCAAGCTTCAGTTGGAGGAGCGATCCAAGTTAACAGAATAAAGATCCTCGAACCCAAGCCCTTCTGTGGGGGCAAGGGATCCAAAAGCCTTGGAAAATTACATCTTTGA
Protein sequence
MLYLVEVLNFVRFLETRIQIFFEKVDVIDVVTGRLNELSIKELLTRVDTLKAKAARTENYECGDSSTDSVAHIEECVGELDSSQKTIVEMKNDMSEVFHVAFSVVRNEIADVSMRVNLTMHTMTNQASVGGAIQVNRIKILEPKPFCGGKGSKSLGKLHL
Homology
BLAST of PI0004009 vs. ExPASy TrEMBL
Match:
A0A5A7UCI7 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1510G00050 PE=4 SV=1)
HSP 1 Score: 174.5 bits (441), Expect = 3.6e-40
Identity = 96/160 (60.00%), Postives = 118/160 (73.75%), Query Frame = 0
Query: 1 MLYLVEVLNFVRFLETRIQIFFEKVDVIDVVTGRLNELSIKELLTRVDTLKAKAARTENY 60
MLYLVEV +RFLE+R++ EK+D+ID V GR+ L I+ELL RVDTL+ RT ++
Sbjct: 22 MLYLVEVPISIRFLESRLEEIAEKIDMIDAVAGRVKGLLIQELLARVDTLEGTVGRTGSH 81
Query: 61 ECGDSSTDSVAHIEECVGELDSSQKTIVEMKNDMSEVFHVAFSVVRNEIADVSMRVNLTM 120
E GDSST SVAHIEE V ELDSSQKT++EM N MSE F VVRNEIADV+ R++LTM
Sbjct: 82 ERGDSSTGSVAHIEERVQELDSSQKTLLEMINGMSENFRATLDVVRNEIADVNARLSLTM 141
Query: 121 HTMTNQASVGGAIQVNRIKILEPKPFCGGKGSKSLGKLHL 161
M NQA GGAI V+R+KI EPKPFCG + +K+L +L
Sbjct: 142 RAMANQAPAGGAISVSRVKIPEPKPFCGARDAKALENYYL 181
BLAST of PI0004009 vs. ExPASy TrEMBL
Match:
A0A5A7SM70 (Senescence-specific cysteine protease sag39 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold3326G00020 PE=4 SV=1)
HSP 1 Score: 174.1 bits (440), Expect = 4.7e-40
Identity = 96/160 (60.00%), Postives = 118/160 (73.75%), Query Frame = 0
Query: 1 MLYLVEVLNFVRFLETRIQIFFEKVDVIDVVTGRLNELSIKELLTRVDTLKAKAARTENY 60
MLYLVEV +RFLE+R++ EK+D+ID V GR+ LSI+ELL RVDTL+ R ++
Sbjct: 1 MLYLVEVPVSIRFLESRLEEIAEKIDMIDAVAGRVEGLSIQELLARVDTLEGTVGRIGSH 60
Query: 61 ECGDSSTDSVAHIEECVGELDSSQKTIVEMKNDMSEVFHVAFSVVRNEIADVSMRVNLTM 120
E GDSST SVAHIEE V ELDSSQKT++EM N MSE F VVRNEIADV+ R++LTM
Sbjct: 61 ERGDSSTGSVAHIEERVQELDSSQKTLLEMINGMSEDFRATIDVVRNEIADVNARLSLTM 120
Query: 121 HTMTNQASVGGAIQVNRIKILEPKPFCGGKGSKSLGKLHL 161
M NQA GGAI V+R+KI EPKPFCG + +K+L +L
Sbjct: 121 RAMANQAPAGGAIPVSRVKIPEPKPFCGARDAKALENYYL 160
BLAST of PI0004009 vs. ExPASy TrEMBL
Match:
A0A5D3BLG1 (Senescence-specific cysteine protease sag39 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold596G00700 PE=4 SV=1)
HSP 1 Score: 173.3 bits (438), Expect = 8.0e-40
Identity = 91/155 (58.71%), Postives = 113/155 (72.90%), Query Frame = 0
Query: 1 MLYLVEVLNFVRFLETRIQIFFEKVDVIDVVTGRLNELSIKELLTRVDTLKAKAARTENY 60
MLYL EV +F+ FLE+R++ EK D ID V GR+ L I+ELL RVDTL+ R NY
Sbjct: 23 MLYLAEVPDFIHFLESRLEEITEKTDTIDAVVGRVEGLPIQELLARVDTLEGNVVRIVNY 82
Query: 61 ECGDSSTDSVAHIEECVGELDSSQKTIVEMKNDMSEVFHVAFSVVRNEIADVSMRVNLTM 120
E GDSS VAH+EECV ELDSSQKT++EM NDMS+ F VVRNEIADV+ R+NLT+
Sbjct: 83 EYGDSSLGFVAHMEECVNELDSSQKTLLEMINDMSKDFRATLDVVRNEIADVNARLNLTV 142
Query: 121 HTMTNQASVGGAIQVNRIKILEPKPFCGGKGSKSL 156
+ NQA GGAI V+R+KI EPKPFCG + +++L
Sbjct: 143 RAIANQALAGGAISVSRVKIPEPKPFCGARDARAL 177
BLAST of PI0004009 vs. ExPASy TrEMBL
Match:
A0A5A7SKW3 (Retrotrans_gag domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold139G005100 PE=4 SV=1)
HSP 1 Score: 172.2 bits (435), Expect = 1.8e-39
Identity = 95/157 (60.51%), Postives = 116/157 (73.89%), Query Frame = 0
Query: 1 MLYLVEVLNFVRFLETRIQIFFEKVDVIDVVTGRLNELSIKELLTRVDTLK--AKAARTE 60
MLYLVEV + +R+LE+R++ F+K + ID VTGR+ I+EL+TRVD L+ RT
Sbjct: 22 MLYLVEVPDSIRYLESRLEEIFQKTNTIDAVTGRVEGFPIQELMTRVDALETTVNIGRTV 81
Query: 61 NYECGDSSTDSVAHIEECVGELDSSQKTIVEMKNDMSEVFHVAFSVVRNEIADVSMRVNL 120
NYE GDSST SVAHIEE V ELDSSQKT++EM N MSE F VVRNEIADV+ R+NL
Sbjct: 82 NYERGDSSTGSVAHIEERVQELDSSQKTLLEMINGMSEDFRATLDVVRNEIADVNARLNL 141
Query: 121 TMHTMTNQASVGGAIQVNRIKILEPKPFCGGKGSKSL 156
TM M NQA GGAI V+R+KI EPKPFCG + +K+L
Sbjct: 142 TMRAMANQAPAGGAIPVSRVKIPEPKPFCGARDAKAL 178
BLAST of PI0004009 vs. ExPASy TrEMBL
Match:
A0A5D3DK41 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold419G00550 PE=4 SV=1)
HSP 1 Score: 172.2 bits (435), Expect = 1.8e-39
Identity = 102/157 (64.97%), Postives = 118/157 (75.16%), Query Frame = 0
Query: 1 MLYLVEVLNFVRFLETRIQIFFEKVDVIDVVTGRLNELSIKELLTRVDTLKAKAARTENY 60
MLYLVEV +FV FLET Q EK+D ID VT RL+ L I+ELLTR+DTL+ K RT NY
Sbjct: 100 MLYLVEVPDFVHFLETHTQENSEKIDAIDAVTDRLDGLPIQELLTRIDTLETKFVRTGNY 159
Query: 61 ECGDSSTDSVAHIEECVGELDSSQKTIVEMKNDMSEVFHVAFSVVRNEIADVSMRVNLTM 120
E G+SST S+A IEE VGELDSSQKTI+E+ NDM E F A +VVRNEIA+VS RVNLTM
Sbjct: 160 ERGNSSTGSIADIEEHVGELDSSQKTIMEIINDMLEDFLAALNVVRNEIANVSTRVNLTM 219
Query: 121 H--TMTNQASVGGAIQVNRIKILEPKPFCGGKGSKSL 156
TM NQA GAI V+RIKI EP PFCG + +K+L
Sbjct: 220 ANLTMANQAPARGAITVSRIKIPEPMPFCGTRDAKAL 256
BLAST of PI0004009 vs. NCBI nr
Match:
KAA0051251.1 (uncharacterized protein E6C27_scaffold2143G00070 [Cucumis melo var. makuwa] >TYK28094.1 uncharacterized protein E5676_scaffold1510G00050 [Cucumis melo var. makuwa])
HSP 1 Score: 174.5 bits (441), Expect = 7.4e-40
Identity = 96/160 (60.00%), Postives = 118/160 (73.75%), Query Frame = 0
Query: 1 MLYLVEVLNFVRFLETRIQIFFEKVDVIDVVTGRLNELSIKELLTRVDTLKAKAARTENY 60
MLYLVEV +RFLE+R++ EK+D+ID V GR+ L I+ELL RVDTL+ RT ++
Sbjct: 22 MLYLVEVPISIRFLESRLEEIAEKIDMIDAVAGRVKGLLIQELLARVDTLEGTVGRTGSH 81
Query: 61 ECGDSSTDSVAHIEECVGELDSSQKTIVEMKNDMSEVFHVAFSVVRNEIADVSMRVNLTM 120
E GDSST SVAHIEE V ELDSSQKT++EM N MSE F VVRNEIADV+ R++LTM
Sbjct: 82 ERGDSSTGSVAHIEERVQELDSSQKTLLEMINGMSENFRATLDVVRNEIADVNARLSLTM 141
Query: 121 HTMTNQASVGGAIQVNRIKILEPKPFCGGKGSKSLGKLHL 161
M NQA GGAI V+R+KI EPKPFCG + +K+L +L
Sbjct: 142 RAMANQAPAGGAISVSRVKIPEPKPFCGARDAKALENYYL 181
BLAST of PI0004009 vs. NCBI nr
Match:
KAA0031850.1 (senescence-specific cysteine protease sag39 [Cucumis melo var. makuwa])
HSP 1 Score: 174.1 bits (440), Expect = 9.7e-40
Identity = 96/160 (60.00%), Postives = 118/160 (73.75%), Query Frame = 0
Query: 1 MLYLVEVLNFVRFLETRIQIFFEKVDVIDVVTGRLNELSIKELLTRVDTLKAKAARTENY 60
MLYLVEV +RFLE+R++ EK+D+ID V GR+ LSI+ELL RVDTL+ R ++
Sbjct: 1 MLYLVEVPVSIRFLESRLEEIAEKIDMIDAVAGRVEGLSIQELLARVDTLEGTVGRIGSH 60
Query: 61 ECGDSSTDSVAHIEECVGELDSSQKTIVEMKNDMSEVFHVAFSVVRNEIADVSMRVNLTM 120
E GDSST SVAHIEE V ELDSSQKT++EM N MSE F VVRNEIADV+ R++LTM
Sbjct: 61 ERGDSSTGSVAHIEERVQELDSSQKTLLEMINGMSEDFRATIDVVRNEIADVNARLSLTM 120
Query: 121 HTMTNQASVGGAIQVNRIKILEPKPFCGGKGSKSLGKLHL 161
M NQA GGAI V+R+KI EPKPFCG + +K+L +L
Sbjct: 121 RAMANQAPAGGAIPVSRVKIPEPKPFCGARDAKALENYYL 160
BLAST of PI0004009 vs. NCBI nr
Match:
TYK00114.1 (senescence-specific cysteine protease sag39 [Cucumis melo var. makuwa])
HSP 1 Score: 173.3 bits (438), Expect = 1.7e-39
Identity = 91/155 (58.71%), Postives = 113/155 (72.90%), Query Frame = 0
Query: 1 MLYLVEVLNFVRFLETRIQIFFEKVDVIDVVTGRLNELSIKELLTRVDTLKAKAARTENY 60
MLYL EV +F+ FLE+R++ EK D ID V GR+ L I+ELL RVDTL+ R NY
Sbjct: 23 MLYLAEVPDFIHFLESRLEEITEKTDTIDAVVGRVEGLPIQELLARVDTLEGNVVRIVNY 82
Query: 61 ECGDSSTDSVAHIEECVGELDSSQKTIVEMKNDMSEVFHVAFSVVRNEIADVSMRVNLTM 120
E GDSS VAH+EECV ELDSSQKT++EM NDMS+ F VVRNEIADV+ R+NLT+
Sbjct: 83 EYGDSSLGFVAHMEECVNELDSSQKTLLEMINDMSKDFRATLDVVRNEIADVNARLNLTV 142
Query: 121 HTMTNQASVGGAIQVNRIKILEPKPFCGGKGSKSL 156
+ NQA GGAI V+R+KI EPKPFCG + +++L
Sbjct: 143 RAIANQALAGGAISVSRVKIPEPKPFCGARDARAL 177
BLAST of PI0004009 vs. NCBI nr
Match:
KAA0031722.1 (uncharacterized protein E6C27_scaffold139G005100 [Cucumis melo var. makuwa])
HSP 1 Score: 172.2 bits (435), Expect = 3.7e-39
Identity = 95/157 (60.51%), Postives = 116/157 (73.89%), Query Frame = 0
Query: 1 MLYLVEVLNFVRFLETRIQIFFEKVDVIDVVTGRLNELSIKELLTRVDTLK--AKAARTE 60
MLYLVEV + +R+LE+R++ F+K + ID VTGR+ I+EL+TRVD L+ RT
Sbjct: 22 MLYLVEVPDSIRYLESRLEEIFQKTNTIDAVTGRVEGFPIQELMTRVDALETTVNIGRTV 81
Query: 61 NYECGDSSTDSVAHIEECVGELDSSQKTIVEMKNDMSEVFHVAFSVVRNEIADVSMRVNL 120
NYE GDSST SVAHIEE V ELDSSQKT++EM N MSE F VVRNEIADV+ R+NL
Sbjct: 82 NYERGDSSTGSVAHIEERVQELDSSQKTLLEMINGMSEDFRATLDVVRNEIADVNARLNL 141
Query: 121 TMHTMTNQASVGGAIQVNRIKILEPKPFCGGKGSKSL 156
TM M NQA GGAI V+R+KI EPKPFCG + +K+L
Sbjct: 142 TMRAMANQAPAGGAIPVSRVKIPEPKPFCGARDAKAL 178
BLAST of PI0004009 vs. NCBI nr
Match:
TYK23878.1 (uncharacterized protein E5676_scaffold419G00550 [Cucumis melo var. makuwa])
HSP 1 Score: 172.2 bits (435), Expect = 3.7e-39
Identity = 102/157 (64.97%), Postives = 118/157 (75.16%), Query Frame = 0
Query: 1 MLYLVEVLNFVRFLETRIQIFFEKVDVIDVVTGRLNELSIKELLTRVDTLKAKAARTENY 60
MLYLVEV +FV FLET Q EK+D ID VT RL+ L I+ELLTR+DTL+ K RT NY
Sbjct: 100 MLYLVEVPDFVHFLETHTQENSEKIDAIDAVTDRLDGLPIQELLTRIDTLETKFVRTGNY 159
Query: 61 ECGDSSTDSVAHIEECVGELDSSQKTIVEMKNDMSEVFHVAFSVVRNEIADVSMRVNLTM 120
E G+SST S+A IEE VGELDSSQKTI+E+ NDM E F A +VVRNEIA+VS RVNLTM
Sbjct: 160 ERGNSSTGSIADIEEHVGELDSSQKTIMEIINDMLEDFLAALNVVRNEIANVSTRVNLTM 219
Query: 121 H--TMTNQASVGGAIQVNRIKILEPKPFCGGKGSKSL 156
TM NQA GAI V+RIKI EP PFCG + +K+L
Sbjct: 220 ANLTMANQAPARGAITVSRIKIPEPMPFCGTRDAKAL 256
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A5A7UCI7 | 3.6e-40 | 60.00 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
A0A5A7SM70 | 4.7e-40 | 60.00 | Senescence-specific cysteine protease sag39 OS=Cucumis melo var. makuwa OX=11946... | [more] |
A0A5D3BLG1 | 8.0e-40 | 58.71 | Senescence-specific cysteine protease sag39 OS=Cucumis melo var. makuwa OX=11946... | [more] |
A0A5A7SKW3 | 1.8e-39 | 60.51 | Retrotrans_gag domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 ... | [more] |
A0A5D3DK41 | 1.8e-39 | 64.97 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
Match Name | E-value | Identity | Description | |
KAA0051251.1 | 7.4e-40 | 60.00 | uncharacterized protein E6C27_scaffold2143G00070 [Cucumis melo var. makuwa] >TYK... | [more] |
KAA0031850.1 | 9.7e-40 | 60.00 | senescence-specific cysteine protease sag39 [Cucumis melo var. makuwa] | [more] |
TYK00114.1 | 1.7e-39 | 58.71 | senescence-specific cysteine protease sag39 [Cucumis melo var. makuwa] | [more] |
KAA0031722.1 | 3.7e-39 | 60.51 | uncharacterized protein E6C27_scaffold139G005100 [Cucumis melo var. makuwa] | [more] |
TYK23878.1 | 3.7e-39 | 64.97 | uncharacterized protein E5676_scaffold419G00550 [Cucumis melo var. makuwa] | [more] |
Match Name | E-value | Identity | Description | |