PI0004000 (gene) Melon (PI 482460) v1

Overview


Name	PI0004000
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	Signal recognition particle subunit SRP72
Location	chr12: 10438765 .. 10442681 (-)
RNA-Seq Expression	PI0004000
Synteny	PI0004000

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTGTGCTCGTAAAATGAATTGTCTGCCGCTAGTTTCTTTTAGAAATCGACGGAATAGCCCGCCGCATTTGATATGATCGTATAGTGTACGTGCTTCATAGGTTATCCGTCTGTTTGGCGAGATAAAAAAAAATCAGAGCTTTCGCTTTGGCGGAGAAGAAAAATGGCTCCGAAATCCAAAGACAAGCCAAAGGCATCACCATCTTCTCAGCCGCCACCACCCATCGAAGATCAATTCACTTCCCTTAACAGACACATCCAGCGATCTGAATTCTCACAAGCCGTCAAAGTTGCAGATCAAAGTCTGTAGTCTTCTTTTCTCCAACATTTTCATTCCATTTCTCTTTACTTCCTAAATTCACACCTGTTGAATTATTTCACAGTTCTTTCAATTGCTCCTGGTGACGAAGACGCCCTTCGATGCAAAATCGTAGCGTTGATCAAAGATGATAGAATTGATAATGCTCTTTCAGCTATTCAATCTTCTAAGACCACTGATTTCAGCTTCTTCAAGGTAGATGGGATTTTAGCAATTGCGTTGGCTGTTCTGAAATAGATGAATTGAGTATTTCACGGGGGGAATTATTTGTTAGGTTATATTTTTCAGGCACTTGGATCTCTTAGCCCATTTTTAGTGACTTCATGAAATTATTTGATGCAGCTGAATACAATTTTCAAAAGAAATGAAACTAATAAGTAATTAAATAATATGCAACAGTGTATTAATGAATTAAAAATGGTAGAAGGATACGTAAATTTTGCTTTCATCTTGTTCTGTTTTTCATTTTGTGGTGCCTAACATTCTACAAATCTTAATGTTGTTGGGATTGTTGAGCCTTCAGACTTAATTAACTTGAATGAAATTTCGGTTAAGGTTAGCTAGTGAAGATATAGCTTGAGTACCTAAGATTAACATCTTCGTTCAACGTTGTCTTCGTGTTCACTTTAGATAGGCTTTTCAATCTGGATTGATTGACTTGCAGCTCTGCTCAGTAAATAATAATACTATGTAAGAATAAACTGATTAGATTTTTCAGGATCCTTATAGTAGACTACGGTTGTTGGCTTGATGAAATTTTTGAACGAGTAGATGGAGATGCGAAGCGAATGTCTTTTGTTCAATCTGTTTCTGTTCTTATTTATGTCTTTTCCTTGCCAAAATTAAGGAGTTCCACTATTAAATTCTAAAAAACCCCTCAATTACTCTTTAAACCAAACGAAAGTTGAGTGACTCTTTTTATCTTCTGTCTCTAGATTCGTGCAGTCATGTTAGTGTGCTCCCACACAACCAACTAACTCATTTTGTGTTGTTTACATTTCTTTATTAAAAAATAGGCATACTGCCTATACAGGCAAAATAAGTTAGATGAAGCTTTGGGTTCCTTGAGAGACCAAGAAAGAAACTCAATGACGATGGTATTGGAATCTCAGATCTTATATCGTTTAGGAAAAATGGATGCTTGCGTGGACACTTATCAGAAGCTCGCAAAATCAAAGATTGATTCATTAGAAATAAATTATGTTGCAGCTTTAACTGCAGCTGGGCGGCCTCTGAAGTACAAGGAGCCATGGAGGCTCTTAGGGTGAAAGCTACCAGTAGCTTTGAGTTGGCATACAATACTGCATGTTCCTTGGTTGACGTGAACAAGTATACAGATGCAGAACAATTGTTACTGTCAGCTCGAAGGTAATATGTTTATACATATATAATTCATAAGAATAGTTAGTTTCCAGTTTTTGGTGCTCAATGGTGAAACGTCAGGCAAGTGACAAGTATTTAAGTGCCATTTACGTATGTATTTACTGTTACTCGTTATTAGAAATGTTTTAAGTGGTTCTACTGTATCTTTGTTTTACTCGAAGTTCCCCATTTATCCTTAAAATTATTTCTCTTAAACTAACAATTTTTGTTATACTTTGGGTGATTTTGTCAGAATTGGTCAAGAAACGCTCATGGAAGAGAATTTGCCTGATGAAGATATTGAGATTGAGCTAGCCCCAATAGCTGTCCAACTGGCATACTTGCAGCAGGTAACTTCACTGACAAAATGAATGCTTTTACTTTTCCTTGAGCACTTGAGGTATTTAATCATGTAATCCCAATTTATCTTTATCAGCTTCTTGGTCACACATCAGAAGCCTCTGAAGCTTACAAAGACATCATTAATCGAGATTTGGCTGATGAATCTTCACTTGCAGTGGCAGTGAACAATCTAATTGCATTAAAAGGTCCAAAAGATATTTCCGATGGCCTTAGAAAACTCGATAAGCTAAAAGAGAAAGATGCACCAAACTTCCGACTTGCTCGTGGACTTGAACCAAAGATTTCTCAAAAACAAAGGGAAACAATATATGCAAATCGTCTCCTTCTCCTTCTCCATGCTAATAAGATGGATCAGGTCTGGTTATATCCTGCATTTTCTTTTGAACGTTAATACCTTTCTGTAATTCTCCGGATGCATAAAAGTTTAGAATGAAATTTTGTGGATTCCATATGCTTGAAAGTCCCCTTTTACATGTTACAGGCTCGAGAAATCGTTGCAACTATGGCAGATATGTTTCCGAACAGCGTGACCCCTGTACTGCTTCAAGCGGCTGTATTAGTAAGAGAGAATAAAGCTGGGAAAGCTGAAGAAATTTTGGGTCAGTTTGCTCAAAATTTCCCAGATAAGTCAAAGTTGGTTCTCCTAGCAAGGGCGCAGGTGGCTGCTGCTGCAGGCCATCCTCATGTTGCATTCGAGTCCCTTTCTAAAATACATGATATTCAACACATGCCTGCCACCATTGCTACACTTGTGGCTCTCAAAGAACGCGCTGGAGATGTTGATGGAGCTATTGCCGTGCTCGACTCTGCAGTCAAATGGTGGTCAAACGCCATGACTGAAGACAACAAGCTTGATGTTGTTTTGCAGGAAGCAGCTTCCTTCAAGCTGAAGCATGGCCACGAAGAAGAGGCAGCCAAATTATACGAAGAGCTCGTTAAGACTCATGGAAGTATAGAAGCATTAGCTGGATTGGTCAAGACAGTTGCTCGTGTGGATATTAAGAAGGCAGAAACTTATGAGAAGCAGTTGAAGCCGTTACTGGGCTTGAAGGAGGTTGATGTGGAGAATCTGGAGAGGACTTCCGGAGCAAAACATGTTGAGAATGCTGCTGATCTTGGAGCATCTGATGCATACATGGTGGATAAAAACAAGACCAAATCAAAGAAAAAGAGAAAGAGAAAGCCAAGATATCCTAAAGGATTTGATCCTGCAAATCCAGGTCCTCCCCCTGATCCAGAAAGGTGGCTTCCCAGGAGAGAGAGATCAAGCTATAGACCAAAACGAAAAGATAAGCGAGCTGCCCAGGTGAGAGGTTCCCAAGGTGCAGTGGTTAGAGAAAAACATGAAACTAGTGTCTCTGGAGGCAGTTCCAACAATGCAAATTCAAAATCTAACCAAGCAACAAGTTCGAAAGGGACCAACCAAAACACGGGTTCTGAGCAATCAAAGCCTTCGTCGAAGTCTTCGAAAAAGAAGTCTAGGAATTAAACTAAGAAATCCTGATTCAAATTTTGGGAATCTTTTTCCTTGGAGAATCTGGTATTTGAACAATTTATGCTATAAATTTTAGTGAGCATTCCAAATACTTTAGCACATCAGCATCAGTTTTCTTTGAATTATGGTGCAGTTTTCTCTTTGTTTGACAATTAGTATCCATTTGGCTGTTGCTGAAGTTGGAAGTTGTAATTTACCTGCATTCTGTTAATTTCTTTTTTCTTTAGGTTGGGGATCTGAACCTTTTGTCTTTCATAGCGGTGATTATCGTCTTTACTAATTGAGCTATGCTTTGCCATTGGAGGGTTGTAAGAAAATTTGACTTAGGCTGTGGAATCTGATTAGAAGAATAATGATTATACTGTGTCAATTTTTGTTA

mRNA sequence

CTGTGCTCGTAAAATGAATTGTCTGCCGCTAGTTTCTTTTAGAAATCGACGGAATAGCCCGCCGCATTTGATATGATCGTATAGTGTACGTGCTTCATAGGTTATCCGTCTGTTTGGCGAGATAAAAAAAAATCAGAGCTTTCGCTTTGGCGGAGAAGAAAAATGGCTCCGAAATCCAAAGACAAGCCAAAGGCATCACCATCTTCTCAGCCGCCACCACCCATCGAAGATCAATTCACTTCCCTTAACAGACACATCCAGCGATCTGAATTCTCACAAGCCGTCAAAGTTGCAGATCAAATTCTTTCAATTGCTCCTGGTGACGAAGACGCCCTTCGATGCAAAATCGTAGCGTTGATCAAAGATGATAGAATTGATAATGCTCTTTCAGCTATTCAATCTTCTAAGACCACTGATTTCAGCTTCTTCAAGGTAGATGGGATTTTAGCAATTGCGTTGGCTGTTCTGAAATAGATGAATTGAGTATTTCACGGGGGGAATTATTTGTTAGGTTATATTTTTCAGGCACTTGGATCTCTTAGCCCATTTTTAGTGACTTCATGAAATTATTTGATGCAGCTGAATACAATTTTCAAAAGAAATGAAACTAATAAGTAATTAAATAATATGCAACAGTGTATTAATGAATTAAAAATGGTAGAAGGATACGTAAATTTTGCTTTCATCTTGTTCTGTTTTTCATTTTGTGGTGCCTAACATTCTACAAATCTTAATGTTGTTGGGATTGTTGAGCCTTCAGACTTAATTAACTTGAATGAAATTTCGGTTAAGGTTAGCTAGTGAAGATATAGCTTGAGTACCTAAGATTAACATCTTCGTTCAACGTTGTCTTCGTGTTCACTTTAGATAGGCTTTTCAATCTGGATTGATTGACTTGCAGCTCTGCTCAGTAAATAATAATACTATGTAAGAATAAACTGATTAGATTTTTCAGGATCCTTATAGTAGACTACGGTTGTTGGCTTGATGAAATTTTTGAACGAGTAGATGGAGATGCGAAGCGAATGTCTTTTGTTCAATCTGTTTCTGTTCTTATTTATGTCTTTTCCTTGCCAAAATTAAGGAGTTCCACTATTAAATTCTAAAAAACCCCTCAATTACTCTTTAAACCAAACGAAAGTTGAGTGACTCTTTTTATCTTCTGTCTCTAGATTCGTGCAGTCATGTTAGTGTGCTCCCACACAACCAACTAACTCATTTTGTGTTGTTTACATTTCTTTATTAAAAAATAGGCATACTGCCTATACAGGCAAAATAAGTTAGATGAAGCTTTGGGTTCCTTGAGAGACCAAGAAAGAAACTCAATGACGATGGTATTGGAATCTCAGATCTTATATCGTTTAGGAAAAATGGATGCTTGCGTGGACACTTATCAGAAGCTCGCAAAATCAAAGATTGATTCATTAGAAATAAATTATGTTGCAGCTTTAACTGCAGCTGGGCGGCCTCTGAAGTACAAGGAGCCATGGAGGCTCTTAGGGTGAAAGCTACCAGTAGCTTTGAGTTGGCATACAATACTGCATGTTCCTTGGTTGACGTGAACAAGTATACAGATGCAGAACAATTGTTACTGTCAGCTCGAAGAATTGGTCAAGAAACGCTCATGGAAGAGAATTTGCCTGATGAAGATATTGAGATTGAGCTAGCCCCAATAGCTGTCCAACTGGCATACTTGCAGCAGCTTCTTGGTCACACATCAGAAGCCTCTGAAGCTTACAAAGACATCATTAATCGAGATTTGGCTGATGAATCTTCACTTGCAGTGGCAGTGAACAATCTAATTGCATTAAAAGGTCCAAAAGATATTTCCGATGGCCTTAGAAAACTCGATAAGCTAAAAGAGAAAGATGCACCAAACTTCCGACTTGCTCGTGGACTTGAACCAAAGATTTCTCAAAAACAAAGGGAAACAATATATGCAAATCGTCTCCTTCTCCTTCTCCATGCTAATAAGATGGATCAGGCTCGAGAAATCGTTGCAACTATGGCAGATATGTTTCCGAACAGCGTGACCCCTGTACTGCTTCAAGCGGCTGTATTAGTAAGAGAGAATAAAGCTGGGAAAGCTGAAGAAATTTTGGGTCAGTTTGCTCAAAATTTCCCAGATAAGTCAAAGTTGGTTCTCCTAGCAAGGGCGCAGGTGGCTGCTGCTGCAGGCCATCCTCATGTTGCATTCGAGTCCCTTTCTAAAATACATGATATTCAACACATGCCTGCCACCATTGCTACACTTGTGGCTCTCAAAGAACGCGCTGGAGATGTTGATGGAGCTATTGCCGTGCTCGACTCTGCAGTCAAATGGTGGTCAAACGCCATGACTGAAGACAACAAGCTTGATGTTGTTTTGCAGGAAGCAGCTTCCTTCAAGCTGAAGCATGGCCACGAAGAAGAGGCAGCCAAATTATACGAAGAGCTCGTTAAGACTCATGGAAGTATAGAAGCATTAGCTGGATTGGTCAAGACAGTTGCTCGTGTGGATATTAAGAAGGCAGAAACTTATGAGAAGCAGTTGAAGCCGTTACTGGGCTTGAAGGAGGTTGATGTGGAGAATCTGGAGAGGACTTCCGGAGCAAAACATGTTGAGAATGCTGCTGATCTTGGAGCATCTGATGCATACATGGTGGATAAAAACAAGACCAAATCAAAGAAAAAGAGAAAGAGAAAGCCAAGATATCCTAAAGGATTTGATCCTGCAAATCCAGGTCCTCCCCCTGATCCAGAAAGGTGGCTTCCCAGGAGAGAGAGATCAAGCTATAGACCAAAACGAAAAGATAAGCGAGCTGCCCAGGTGAGAGGTTCCCAAGGTGCAGTGGTTAGAGAAAAACATGAAACTAGTGTCTCTGGAGGCAGTTCCAACAATGCAAATTCAAAATCTAACCAAGCAACAAGTTCGAAAGGGACCAACCAAAACACGGGTTCTGAGCAATCAAAGCCTTCGTCGAAGTCTTCGAAAAAGAAGTCTAGGAATTAAACTAAGAAATCCTGATTCAAATTTTGGGAATCTTTTTCCTTGGAGAATCTGGTATTTGAACAATTTATGCTATAAATTTTAGTGAGCATTCCAAATACTTTAGCACATCAGCATCAGTTTTCTTTGAATTATGGTGCAGTTTTCTCTTTGTTTGACAATTAGTATCCATTTGGCTGTTGCTGAAGTTGGAAGTTGTAATTTACCTGCATTCTGTTAATTTCTTTTTTCTTTAGGTTGGGGATCTGAACCTTTTGTCTTTCATAGCGGTGATTATCGTCTTTACTAATTGAGCTATGCTTTGCCATTGGAGGGTTGTAAGAAAATTTGACTTAGGCTGTGGAATCTGATTAGAAGAATAATGATTATACTGTGTCAATTTTTGTTA

Coding sequence (CDS)

ATGGAGGCTCTTAGGGTGAAAGCTACCAGTAGCTTTGAGTTGGCATACAATACTGCATGTTCCTTGGTTGACGTGAACAAGTATACAGATGCAGAACAATTGTTACTGTCAGCTCGAAGAATTGGTCAAGAAACGCTCATGGAAGAGAATTTGCCTGATGAAGATATTGAGATTGAGCTAGCCCCAATAGCTGTCCAACTGGCATACTTGCAGCAGCTTCTTGGTCACACATCAGAAGCCTCTGAAGCTTACAAAGACATCATTAATCGAGATTTGGCTGATGAATCTTCACTTGCAGTGGCAGTGAACAATCTAATTGCATTAAAAGGTCCAAAAGATATTTCCGATGGCCTTAGAAAACTCGATAAGCTAAAAGAGAAAGATGCACCAAACTTCCGACTTGCTCGTGGACTTGAACCAAAGATTTCTCAAAAACAAAGGGAAACAATATATGCAAATCGTCTCCTTCTCCTTCTCCATGCTAATAAGATGGATCAGGCTCGAGAAATCGTTGCAACTATGGCAGATATGTTTCCGAACAGCGTGACCCCTGTACTGCTTCAAGCGGCTGTATTAGTAAGAGAGAATAAAGCTGGGAAAGCTGAAGAAATTTTGGGTCAGTTTGCTCAAAATTTCCCAGATAAGTCAAAGTTGGTTCTCCTAGCAAGGGCGCAGGTGGCTGCTGCTGCAGGCCATCCTCATGTTGCATTCGAGTCCCTTTCTAAAATACATGATATTCAACACATGCCTGCCACCATTGCTACACTTGTGGCTCTCAAAGAACGCGCTGGAGATGTTGATGGAGCTATTGCCGTGCTCGACTCTGCAGTCAAATGGTGGTCAAACGCCATGACTGAAGACAACAAGCTTGATGTTGTTTTGCAGGAAGCAGCTTCCTTCAAGCTGAAGCATGGCCACGAAGAAGAGGCAGCCAAATTATACGAAGAGCTCGTTAAGACTCATGGAAGTATAGAAGCATTAGCTGGATTGGTCAAGACAGTTGCTCGTGTGGATATTAAGAAGGCAGAAACTTATGAGAAGCAGTTGAAGCCGTTACTGGGCTTGAAGGAGGTTGATGTGGAGAATCTGGAGAGGACTTCCGGAGCAAAACATGTTGAGAATGCTGCTGATCTTGGAGCATCTGATGCATACATGGTGGATAAAAACAAGACCAAATCAAAGAAAAAGAGAAAGAGAAAGCCAAGATATCCTAAAGGATTTGATCCTGCAAATCCAGGTCCTCCCCCTGATCCAGAAAGGTGGCTTCCCAGGAGAGAGAGATCAAGCTATAGACCAAAACGAAAAGATAAGCGAGCTGCCCAGGTGAGAGGTTCCCAAGGTGCAGTGGTTAGAGAAAAACATGAAACTAGTGTCTCTGGAGGCAGTTCCAACAATGCAAATTCAAAATCTAACCAAGCAACAAGTTCGAAAGGGACCAACCAAAACACGGGTTCTGAGCAATCAAAGCCTTCGTCGAAGTCTTCGAAAAAGAAGTCTAGGAATTAA

Protein sequence

MEALRVKATSSFELAYNTACSLVDVNKYTDAEQLLLSARRIGQETLMEENLPDEDIEIELAPIAVQLAYLQQLLGHTSEASEAYKDIINRDLADESSLAVAVNNLIALKGPKDISDGLRKLDKLKEKDAPNFRLARGLEPKISQKQRETIYANRLLLLLHANKMDQAREIVATMADMFPNSVTPVLLQAAVLVRENKAGKAEEILGQFAQNFPDKSKLVLLARAQVAAAAGHPHVAFESLSKIHDIQHMPATIATLVALKERAGDVDGAIAVLDSAVKWWSNAMTEDNKLDVVLQEAASFKLKHGHEEEAAKLYEELVKTHGSIEALAGLVKTVARVDIKKAETYEKQLKPLLGLKEVDVENLERTSGAKHVENAADLGASDAYMVDKNKTKSKKKRKRKPRYPKGFDPANPGPPPDPERWLPRRERSSYRPKRKDKRAAQVRGSQGAVVREKHETSVSGGSSNNANSKSNQATSSKGTNQNTGSEQSKPSSKSSKKKSRN

Homology

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BLAST of PI0004000 vs. ExPASy Swiss-Prot
Match: P33731 (Signal recognition particle subunit SRP72 OS=Canis lupus familiaris OX=9615 GN=SRP72 PE=1 SV=3)

HSP 1 Score: 211.8 bits (538), Expect = 1.7e-53
Identity = 167/495 (33.74%), Postives = 265/495 (53.54%), Query Frame = 0


Query: 13  ELAYNTACSLVDVNKYTDAEQLLLSARRIGQETLMEE-NLPDEDIEIELAPIAVQLAYLQ 72
           EL YN AC+L+   + + A ++L  A  + + +L E+ +  +ED + ELA I  Q+AY+ 
Sbjct: 177 ELCYNAACALIGQGQLSQAMKILQKAEDLCRRSLSEDSDGTEEDPQAELAIIHGQMAYIL 236

Query: 73  QLLGHTSEASEAYKDIINRDLADESSLAVAVNNLIALKGPKDISDGLRKLDKLKEKDAPN 132
           QL G T EA + Y  II     D   LAV  NN+I +   +++ D  +K+ KL       
Sbjct: 237 QLQGRTEEALQLYNQIIKLKPTDVGLLAVIANNIITINKDQNVFDSKKKV-KLTN----- 296

Query: 133 FRLARGLEPKISQKQRETIYANRLLLLLHANKMDQAREIVATMADMFPNSVTPVLLQAAV 192
              A G+E K+S+KQ + I  N+ LL ++ N+ +Q R+I A++    P  + PVL+QAA 
Sbjct: 297 ---AEGVEFKLSKKQLQAIEFNKALLAMYTNQAEQCRKISASLQSQSPEHLLPVLIQAAQ 356

Query: 193 LVRENKAGKAEEILGQFAQNFPDKSKLVLLARAQVAAAAGHPHVAFESLSKIHDIQHMPA 252
           L RE +  KA E+L +F+   P+ +  + L  AQ+  + G+   A   L  I +++H P 
Sbjct: 357 LCREKQHTKAIELLQEFSDQHPENAAEIKLTMAQLKISQGNISKACLILRSIEELKHKPG 416

Query: 253 TIATLVALKERAGDVDGAIAVLDSAVKWWSNAMTEDNKLDVVLQEAASFKLKHGHEEEAA 312
            ++ LV +     D+D AI V   A++W+ N   + +    +++EAA+FKLK+G ++EA 
Sbjct: 417 MVSALVTMYSHEEDIDSAIEVFTQAIQWYQNHQPKSSAHLSLIREAANFKLKYGRKKEAI 476

Query: 313 KLYEELVKTH-GSIEALAGLVKTVARVDIKKAETYEKQLKPLLGLK-EVDVENLERTSGA 372
              E+L K +   I  LA L+   + VD +KA+   K L     +  +VDVE LE + GA
Sbjct: 477 SDLEQLWKQNPKDIHTLAQLISAYSLVDPEKAKALSKHLPSSDSMSLKVDVEALENSPGA 536

Query: 373 KHVENAADLGASDAYMVDKNK-TKSKKKRKRKPRYPKGFDPANPGPPPDPERWLPRRERS 432
            ++       A D+   ++ +    KKK+K+K + PK +DP      PDPERWLP RERS
Sbjct: 537 TYIRKKGGKVAGDSQPKEQGQGDLKKKKKKKKGKLPKNYDPK---VTPDPERWLPMRERS 596

Query: 433 SYRPKRKDKRAAQV-RGSQGAVVREKHETSVSGGSSNNANS--KSNQATSSKGTNQNTGS 492
            YR ++K K+  Q+ +G+QGA      E   S   S+   S    + AT+S  T+     
Sbjct: 597 YYRGRKKGKKKDQIGKGTQGATAGASSELDASKTVSSPPTSPRPGSAATASASTSNIIPP 656

Query: 493 EQSKPSSKSSKKKSR 501
              KP+   + KK +
Sbjct: 657 RHQKPAGAPATKKKQ 659

[Close]

BLAST of PI0004000 vs. ExPASy Swiss-Prot
Match: O76094 (Signal recognition particle subunit SRP72 OS=Homo sapiens OX=9606 GN=SRP72 PE=1 SV=3)

HSP 1 Score: 209.1 bits (531), Expect = 1.1e-52
Identity = 166/495 (33.54%), Postives = 263/495 (53.13%), Query Frame = 0


Query: 13  ELAYNTACSLVDVNKYTDAEQLLLSARRIGQETLMEE-NLPDEDIEIELAPIAVQLAYLQ 72
           EL YNTAC+L+   +   A ++L  A  + + +L E+ +  +ED + ELA I  Q+AY+ 
Sbjct: 177 ELCYNTACALIGQGQLNQAMKILQKAEDLCRRSLSEDTDGTEEDPQAELAIIHGQMAYIL 236

Query: 73  QLLGHTSEASEAYKDIINRDLADESSLAVAVNNLIALKGPKDISDGLRKLDKLKEKDAPN 132
           QL G T EA + Y  II     D   LAV  NN+I +   +++ D  +K+ KL       
Sbjct: 237 QLQGRTEEALQLYNQIIKLKPTDVGLLAVIANNIITINKDQNVFDSKKKV-KLTN----- 296

Query: 133 FRLARGLEPKISQKQRETIYANRLLLLLHANKMDQAREIVATMADMFPNSVTPVLLQAAV 192
              A G+E K+S+KQ + I  N+ LL ++ N+ +Q R+I A++    P  + PVL+QAA 
Sbjct: 297 ---AEGVEFKLSKKQLQAIEFNKALLAMYTNQAEQCRKISASLQSQSPEHLLPVLIQAAQ 356

Query: 193 LVRENKAGKAEEILGQFAQNFPDKSKLVLLARAQVAAAAGHPHVAFESLSKIHDIQHMPA 252
           L RE +  KA E+L +F+   P+ +  + L  AQ+  + G+   A   L  I +++H P 
Sbjct: 357 LCREKQHTKAIELLQEFSDQHPENAAEIKLTMAQLKISQGNISKACLILRSIEELKHKPG 416

Query: 253 TIATLVALKERAGDVDGAIAVLDSAVKWWSNAMTEDNKLDVVLQEAASFKLKHGHEEEAA 312
            ++ LV +     D+D AI V   A++W+ N   +      +++EAA+FKLK+G ++EA 
Sbjct: 417 MVSALVTMYSHEEDIDSAIEVFTQAIQWYQNHQPKSPAHLSLIREAANFKLKYGRKKEAI 476

Query: 313 KLYEELVKTH-GSIEALAGLVKTVARVDIKKAETYEKQLKPLLGLK-EVDVENLERTSGA 372
              ++L K +   I  LA L+   + VD +KA+   K L     +  +VDVE LE ++GA
Sbjct: 477 SDLQQLWKQNPKDIHTLAQLISAYSLVDPEKAKALSKHLPSSDSMSLKVDVEALENSAGA 536

Query: 373 KHVENAADLGASDAYMVDKNK-TKSKKKRKRKPRYPKGFDPANPGPPPDPERWLPRRERS 432
            ++         D+   ++ +    KKK+K+K + PK +DP      PDPERWLP RERS
Sbjct: 537 TYIRKKGGKVTGDSQPKEQGQGDLKKKKKKKKGKLPKNYDPK---VTPDPERWLPMRERS 596

Query: 433 SYRPKRKDKRAAQV-RGSQGAVVREKHETSVSGGSSNNANS--KSNQATSSKGTNQNTGS 492
            YR ++K K+  Q+ +G+QGA      E   S   S+   S    + AT S  T+     
Sbjct: 597 YYRGRKKGKKKDQIGKGTQGATAGASSELDASKTVSSPPTSPRPGSAATVSASTSNIIPP 656

Query: 493 EQSKPSSKSSKKKSR 501
              KP+   + KK +
Sbjct: 657 RHQKPAGAPATKKKQ 659

[Close]

BLAST of PI0004000 vs. ExPASy Swiss-Prot
Match: Q54EP7 (Signal recognition particle subunit SRP72 OS=Dictyostelium discoideum OX=44689 GN=srp72 PE=3 SV=1)

HSP 1 Score: 120.9 bits (302), Expect = 4.0e-26
Identity = 131/524 (25.00%), Postives = 242/524 (46.18%), Query Frame = 0


Query: 9   TSSFELAYNTACSLVDVNKYTDAEQLLLSARRIGQETLMEENLPDEDIEIELAPIAVQLA 68
           T + ELA+N+AC  +  N    AE  L  A++I  ++L ++   +E+I+ E   I VQL 
Sbjct: 171 TKTHELAFNSACLAISKNDTKTAETQLKLAKKICTDSLKKDGFSEEEIKEEQTSIDVQLG 230

Query: 69  YLQQLLGHTSEASEAYKDIINRDLADESSLAVAVNNLIALKG----------PKDISDGL 128
           Y+QQ+ G+  ++ E Y++++ + + D ++L VA NN I+++           PK+ +  +
Sbjct: 231 YVQQICGNLEKSLEQYQNVLEQQVGDSATL-VATNNSISVRSILQSDQWSTQPKEYTHAM 290

Query: 129 RKLDKLKEKDAPNFRLARGLEPKISQKQRETIYANRLLLLLHANKMDQAREIVATMADMF 188
             L  L         L      +++ KQ++ I  N  LLL+   K+ Q  E++ T+   +
Sbjct: 291 DSLKSL---------LTEAESTRLNSKQKKVINYNLCLLLVQLKKVSQCEELIKTLKSKY 350

Query: 189 PNSVTPV---------LLQAAVLVRENKAGKAEEILGQFAQNFPDKSKLVLLARAQVAAA 248
                 V         ++Q ++L++E K   AE++L +           +LLA+  +   
Sbjct: 351 GQQQQQVDTSFVEDLDIIQVSLLIKEKKFKDAEKLLLKNNTTTGSIKSQLLLAQIYL-LD 410

Query: 249 AGHPHVAFESLSKI-HDIQHMPATIATLVALKERAGDVDGAIAVLDSAVKWWSNAMTEDN 308
             +   A   L K+   +   P  +AT VAL E++GD++ A+  LD  +  +      + 
Sbjct: 411 NNNVAKALNVLEKLDSSVSLRPGIVATKVALYEKSGDLEKAVNSLDDLISIFDKQKKSEK 470

Query: 309 KLDV---VLQEAASFKLKHGHEEEAAKLYEELVKTH-GSIEALAGLVKTVARVDIKKAET 368
             ++   +L+ + +FKLKH    EA+ +++ ++K +   + AL   +   +  D   ++ 
Sbjct: 471 DEEIYVNLLKASGNFKLKHHKYREASDMFDRVLKINPNDLIALPSYIVATSHFDPSLSQK 530

Query: 369 YEKQLKPLLGLKEVDVENLER--TSGAKHVENAADLGASDAYMVDKNKTKSKKK------ 428
           YE +L  +    ++D++ +E+   +  K +    D  +S         TKS K       
Sbjct: 531 YEGKLPNIKFESKIDIDLIEKYGLTFEKKLNLNEDSNSSSPTTTTTTTTKSTKPTATEVV 590

Query: 429 --RKRKPRYPKGFDPANPGPPPDPERWLPRRERSSYRPKRKDKRAAQVRGSQGAVVREKH 488
             +K K + PK      P   PDP RWLP+ +R++ +  R  K    ++G QG +     
Sbjct: 591 KIKKSKKKLPK---VMKPNYVPDPGRWLPKWQRANAKAARSKKNKDIIKGPQG-IASASQ 650

Query: 489 ETSVSGGSSNNANSKSNQATSSKGTNQNTGSEQSKPSSKSSKKK 499
             S+    S N N+ +N   SSK       SE+ +   K   KK
Sbjct: 651 TASLFVQESKNTNTNNNNTQSSK-------SEKPRNIHKKKSKK 672

[Close]

BLAST of PI0004000 vs. ExPASy Swiss-Prot
Match: P49965 (Signal recognition particle subunit SRP72 OS=Schistosoma mansoni OX=6183 GN=SRP72 PE=3 SV=1)

HSP 1 Score: 115.5 bits (288), Expect = 1.7e-24
Identity = 152/553 (27.49%), Postives = 240/553 (43.40%), Query Frame = 0


Query: 12  FELAYNTACSLVDVNKYTDAEQLLLSARRIGQETLMEE-NLPDEDIEIELAPIAVQLAYL 71
           +E  +N AC  +       A + L  A       L E+  L +E+   ELAPI VQ AY+
Sbjct: 171 YEGKFNLACYHLGRGDCYLASRSLDDAENTCNLCLSEDPELTEEERNEELAPIRVQRAYI 230

Query: 72  QQLLGHTSEASEAYKDIINRDLADESSLAVAVNNLIALKGPKDISDGLRKLDKLKEKDAP 131
            QL     EA++ Y+ +I +  +D + LAVA NN++ +   ++I D  RK  K+   D  
Sbjct: 231 LQLNKEEEEANQVYQSVIRQRASDPALLAVAANNIVCINQDQNIFDS-RKRIKMASTD-- 290

Query: 132 NFRLARGLEPKISQKQRETIYANRLLLLLHANKMDQAREIVATMA--DMFPNSVTPVLLQ 191
                 GL+ K+  +QR  +  N+ L   + N+M+     + T++  ++ P +   +LL 
Sbjct: 291 ------GLQFKLFSRQRTDMLINQALFYWYTNQMEACTAKLRTVSQEELSPRA---LLLS 350

Query: 192 AAVLVRENKAGKAEEILGQFAQNFPDK--SKLVLLARAQ----------VAAAAGHPHVA 251
           A  L++E    KA  +L  +  NF        + LA AQ          +   +  P  A
Sbjct: 351 ATQLIKEKNVDKAVLLLQSYLSNFAGSQIDAEIPLALAQLNLRRTSANNLGTGSPQPKNA 410

Query: 252 FESLSKIHDIQ-----HMPATIATLVALKERAGDVDGAIAV-----------LDSAVKWW 311
                 + +I      H P  ++T +AL   A   + A+             ++S + ++
Sbjct: 411 LNVAQMLENILPQHLIHSPGVLSTRIALYLLASSGENAVQTRPDSMKQIVNCIESTLHYY 470

Query: 312 SNAMTEDNKLDVVLQEAASFKLKHGHEEEAAKLYE-ELVKTHGSI-----------EALA 371
                ++     +L   A+F L+ G  + AA+L E +L +   +I             +A
Sbjct: 471 EELGEQNEIYSHLLDNCAAFLLQQGEAKLAAELLEKQLARLESNICQEKQNSLIKQVLVA 530

Query: 372 GLVKTVARVDIKKAETYEKQLKPLLGLKEVDVENLERT--SGAKHVE---------NAAD 431
            LV+  A+ D  KAE   K L+    L E DV+ LE T   GAK ++         + +D
Sbjct: 531 RLVRAYAQFDRPKAEQTCKSLQAKESLSEADVDTLETTFLYGAKSLKRLGKPSEPTDTSD 590

Query: 432 LGASDAYMVDKNKT--------------KSKKKRKRKPRYPKGFDPANPGPPPDPERWLP 491
            G S    + K+ +                 K++KRK R PK +    PG  PDP RWLP
Sbjct: 591 KGKSKRSQIKKSISDIPSSEDPGAQPVISRPKRKKRKVRLPKNY---QPGVMPDPNRWLP 650

Query: 492 RRERSSYRPKRKDKRAAQVRGSQGAVVREKHETSVSGGSSNNANSKSNQATSSKGTNQNT 497
           RRER+ YR KR+DKR A  RG QG +  E  E   +  S      +   A S+     NT
Sbjct: 651 RRERTHYRGKRRDKRFAPTRGPQGQITGES-EWDAAIRSPKVKIPEDGSAGSTPKQMSNT 707

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BLAST of PI0004000 vs. ExPASy Swiss-Prot
Match: P91240 (Signal recognition particle subunit SRP72 OS=Caenorhabditis elegans OX=6239 GN=srpa-72 PE=3 SV=2)

HSP 1 Score: 107.1 bits (266), Expect = 6.0e-22
Identity = 138/506 (27.27%), Postives = 226/506 (44.66%), Query Frame = 0


Query: 11  SFELAYNTACSLVDVNKYTDAEQLLLSARRIGQETLMEENLPDEDIEIELAPIAVQLAYL 70
           S+   YN AC  ++  K   A + L  A +  +++  +E+  +++IE EL  I VQ AY+
Sbjct: 170 SYSQLYNRACVEIEAEKLPQALESLEKALKTCRKSFEDEDREEDEIEEELDSIRVQKAYV 229

Query: 71  QQLLGHTSEASEAYKDIINRDLADESSLAVAVNNLIALKGPKDISDGLRKLDKLKEKDAP 130
            Q +G  +EA   Y+ +   +  D S  A   NN+ A      + +  ++     + D  
Sbjct: 230 LQRMGQKAEALAIYEKVQAANHPDSSVKATITNNIPAASSDFALPESRKRFKAALQID-- 289

Query: 131 NFRLARGLEPKISQKQRETIYANRLLLLLHANKMDQAREIVATMADMFPNSVTPVLLQAA 190
                   + K++++QR T+  N  L+LL +N+ +  +  +  +   F +S    L++A 
Sbjct: 290 --------QTKLTRRQRLTLMLNNALVLLLSNQREPCKRALEELVAKFGSSKDVALIEAT 349

Query: 191 VLVRENKAGKAEEILGQFAQNFPDKSKLVLLARAQVAAAAGHPHVAFESLSKIHDIQHMP 250
           +     K G AE  L   A +  ++S    LAR  V   AG    A  ++  +     + 
Sbjct: 350 L---HFKMGDAEAALKVLAGSDLEQS----LARLHVLLNAGRLPEAVGAIRDLPISGKLG 409

Query: 251 AT---IATLVALKERAGDVDGAIAVLDSAVKWWSNAMTEDNK----LDVVLQEAASFKLK 310
           A+    +TL+A   R           D AVK    A T  N+    L  +L++    + +
Sbjct: 410 ASSLLTSTLIAADSR-----------DEAVKELVAASTAKNQTPEALKSILEDLVEVEQQ 469

Query: 311 HGHEEEAAKLYEELV-KTHGSIEALAGLVKTVARVDIKKAETYEKQLKPLLGLKEVDVEN 370
            G+E  A K  E+LV K    ++    LV   ++ D KKAE+   +L P     +V+V+ 
Sbjct: 470 RGNETAATKHLEKLVEKFPEDLQLQCRLVGAYSKTDPKKAESLSAKLFPETMEVDVNVDE 529

Query: 371 LERTS----GAKHVENAADLGASDAYMVDKNKTKSKKKRKRKPRYPKGFDPANPGPPPDP 430
           LE +     G K+ +         A +    K K   KRKRK R PK +   N    PDP
Sbjct: 530 LEDSDWILYGEKYRQKKEAKSPQTAEIAATRKLKIATKRKRKIRLPKNY---NSAVTPDP 589

Query: 431 ERWLPRRERSSYRPKRKDKRAAQVRGSQGAVVREKHETSVSGGSSNNANSKSNQATSSKG 490
           ERWLPR+ERS+Y+ KRK++     RG+QG               S++AN      T+S  
Sbjct: 590 ERWLPRQERSTYKRKRKNREREIGRGTQG---------------SSSANPNVEYVTASPN 629

Query: 491 TNQ------NTGSEQSKPSSKSSKKK 499
           + +        G  Q +P+ +  KKK
Sbjct: 650 SPRPLPGPVAEGPRQQRPNFQKQKKK 629

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BLAST of PI0004000 vs. ExPASy TrEMBL
Match: A0A5A7SSZ3 (Signal recognition particle subunit SRP72 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold35G001970 PE=3 SV=1)

HSP 1 Score: 897.1 bits (2317), Expect = 3.3e-257
Identity = 486/501 (97.01%), Postives = 494/501 (98.60%), Query Frame = 0


Query: 1   MEALRVKATSSFELAYNTACSLVDVNKYTDAEQLLLSARRIGQETLMEENLPDEDIEIEL 60
           MEALRVKATSSFELAYNTACSLVDVNKYTDAEQLLLSARRIGQETLMEENLPDEDIEIEL
Sbjct: 169 MEALRVKATSSFELAYNTACSLVDVNKYTDAEQLLLSARRIGQETLMEENLPDEDIEIEL 228

Query: 61  APIAVQLAYLQQLLGHTSEASEAYKDIINRDLADESSLAVAVNNLIALKGPKDISDGLRK 120
           APIAVQLAYLQQLLGHTSEASEAYKDIINRDLADESSLAVAVNNLIALKGPKDISDGLRK
Sbjct: 229 APIAVQLAYLQQLLGHTSEASEAYKDIINRDLADESSLAVAVNNLIALKGPKDISDGLRK 288

Query: 121 LDKLKEKDAPNFRLARGLEPKISQKQRETIYANRLLLLLHANKMDQAREIVATMADMFPN 180
           LDKLKEKDAPNFRLARGLEPKISQKQRE IYANRLLLLLHANKMDQARE+VA MADMFPN
Sbjct: 289 LDKLKEKDAPNFRLARGLEPKISQKQREAIYANRLLLLLHANKMDQAREMVANMADMFPN 348

Query: 181 SVTPVLLQAAVLVRENKAGKAEEILGQFAQNFPDKSKLVLLARAQVAAAAGHPHVAFESL 240
           SVTPVLLQAAVLVRENKAGKAEEILGQFA+NFPDKSKLVLLARAQVAAAAGHPH+AFESL
Sbjct: 349 SVTPVLLQAAVLVRENKAGKAEEILGQFAENFPDKSKLVLLARAQVAAAAGHPHIAFESL 408

Query: 241 SKIHDIQHMPATIATLVALKERAGDVDGAIAVLDSAVKWWSNAMTEDNKLDVVLQEAASF 300
           SKI DIQHMPAT+ATLV+LKERAGDV+GAIAVLDSAVKWWSNAMTEDNKLDVVLQEAASF
Sbjct: 409 SKIQDIQHMPATVATLVSLKERAGDVEGAIAVLDSAVKWWSNAMTEDNKLDVVLQEAASF 468

Query: 301 KLKHGHEEEAAKLYEELVKTHGSIEALAGLVKTVARVDIKKAETYEKQLKPLLGLKEVDV 360
           KLKHG EE+AAKLYEELVKTHGSIEALAGLVKTVARVDIKKAETYEKQLKPL GLKEVDV
Sbjct: 469 KLKHGREEDAAKLYEELVKTHGSIEALAGLVKTVARVDIKKAETYEKQLKPLPGLKEVDV 528

Query: 361 ENLERTSGAKHVENAADLGASDAYMVDKNKTKSKKKRKRKPRYPKGFDPANPGPPPDPER 420
           ENLERTSGAKHVENAADLGASDAYMVDKNKTKSKKKRKRKPRYPKGFDPANPGPPPDPER
Sbjct: 529 ENLERTSGAKHVENAADLGASDAYMVDKNKTKSKKKRKRKPRYPKGFDPANPGPPPDPER 588

Query: 421 WLPRRERSSYRPKRKDKRAAQVRGSQGAVVREKHETSVSGGSSNNANSKSNQATSSKGTN 480
           WLPRRERSSYRPKRKDKRAAQVRGSQGAVVREKHET+VSGGSSNNANSKSNQATSSKGTN
Sbjct: 589 WLPRRERSSYRPKRKDKRAAQVRGSQGAVVREKHETNVSGGSSNNANSKSNQATSSKGTN 648

Query: 481 QNTGSEQSKPSSKSSKKKSRN 502
           QNT  EQSKPSSKSSKKKSRN
Sbjct: 649 QNT--EQSKPSSKSSKKKSRN 667

[Close]

BLAST of PI0004000 vs. ExPASy TrEMBL
Match: A0A1S3BEX5 (Signal recognition particle subunit SRP72 OS=Cucumis melo OX=3656 GN=LOC103488920 PE=3 SV=1)

HSP 1 Score: 897.1 bits (2317), Expect = 3.3e-257
Identity = 486/501 (97.01%), Postives = 494/501 (98.60%), Query Frame = 0


Query: 1   MEALRVKATSSFELAYNTACSLVDVNKYTDAEQLLLSARRIGQETLMEENLPDEDIEIEL 60
           MEALRVKATSSFELAYNTACSLVDVNKYTDAEQLLLSARRIGQETLMEENLPDEDIEIEL
Sbjct: 169 MEALRVKATSSFELAYNTACSLVDVNKYTDAEQLLLSARRIGQETLMEENLPDEDIEIEL 228

Query: 61  APIAVQLAYLQQLLGHTSEASEAYKDIINRDLADESSLAVAVNNLIALKGPKDISDGLRK 120
           APIAVQLAYLQQLLGHTSEASEAYKDIINRDLADESSLAVAVNNLIALKGPKDISDGLRK
Sbjct: 229 APIAVQLAYLQQLLGHTSEASEAYKDIINRDLADESSLAVAVNNLIALKGPKDISDGLRK 288

Query: 121 LDKLKEKDAPNFRLARGLEPKISQKQRETIYANRLLLLLHANKMDQAREIVATMADMFPN 180
           LDKLKEKDAPNFRLARGLEPKISQKQRE IYANRLLLLLHANKMDQARE+VA MADMFPN
Sbjct: 289 LDKLKEKDAPNFRLARGLEPKISQKQREAIYANRLLLLLHANKMDQAREMVANMADMFPN 348

Query: 181 SVTPVLLQAAVLVRENKAGKAEEILGQFAQNFPDKSKLVLLARAQVAAAAGHPHVAFESL 240
           SVTPVLLQAAVLVRENKAGKAEEILGQFA+NFPDKSKLVLLARAQVAAAAGHPH+AFESL
Sbjct: 349 SVTPVLLQAAVLVRENKAGKAEEILGQFAENFPDKSKLVLLARAQVAAAAGHPHIAFESL 408

Query: 241 SKIHDIQHMPATIATLVALKERAGDVDGAIAVLDSAVKWWSNAMTEDNKLDVVLQEAASF 300
           SKI DIQHMPAT+ATLV+LKERAGDV+GAIAVLDSAVKWWSNAMTEDNKLDVVLQEAASF
Sbjct: 409 SKIQDIQHMPATVATLVSLKERAGDVEGAIAVLDSAVKWWSNAMTEDNKLDVVLQEAASF 468

Query: 301 KLKHGHEEEAAKLYEELVKTHGSIEALAGLVKTVARVDIKKAETYEKQLKPLLGLKEVDV 360
           KLKHG EE+AAKLYEELVKTHGSIEALAGLVKTVARVDIKKAETYEKQLKPL GLKEVDV
Sbjct: 469 KLKHGREEDAAKLYEELVKTHGSIEALAGLVKTVARVDIKKAETYEKQLKPLPGLKEVDV 528

Query: 361 ENLERTSGAKHVENAADLGASDAYMVDKNKTKSKKKRKRKPRYPKGFDPANPGPPPDPER 420
           ENLERTSGAKHVENAADLGASDAYMVDKNKTKSKKKRKRKPRYPKGFDPANPGPPPDPER
Sbjct: 529 ENLERTSGAKHVENAADLGASDAYMVDKNKTKSKKKRKRKPRYPKGFDPANPGPPPDPER 588

Query: 421 WLPRRERSSYRPKRKDKRAAQVRGSQGAVVREKHETSVSGGSSNNANSKSNQATSSKGTN 480
           WLPRRERSSYRPKRKDKRAAQVRGSQGAVVREKHET+VSGGSSNNANSKSNQATSSKGTN
Sbjct: 589 WLPRRERSSYRPKRKDKRAAQVRGSQGAVVREKHETNVSGGSSNNANSKSNQATSSKGTN 648

Query: 481 QNTGSEQSKPSSKSSKKKSRN 502
           QNT  EQSKPSSKSSKKKSRN
Sbjct: 649 QNT--EQSKPSSKSSKKKSRN 667

[Close]

BLAST of PI0004000 vs. ExPASy TrEMBL
Match: A0A0A0KS25 (Signal recognition particle subunit SRP72 OS=Cucumis sativus OX=3659 GN=Csa_5G590210 PE=3 SV=1)

HSP 1 Score: 887.5 bits (2292), Expect = 2.6e-254
Identity = 481/501 (96.01%), Postives = 490/501 (97.80%), Query Frame = 0


Query: 1   MEALRVKATSSFELAYNTACSLVDVNKYTDAEQLLLSARRIGQETLMEENLPDEDIEIEL 60
           MEALRVKATSSFELAYNTACSLVDVNKYTDAEQLLLSARRIGQETLMEENLPDEDIEIEL
Sbjct: 169 MEALRVKATSSFELAYNTACSLVDVNKYTDAEQLLLSARRIGQETLMEENLPDEDIEIEL 228

Query: 61  APIAVQLAYLQQLLGHTSEASEAYKDIINRDLADESSLAVAVNNLIALKGPKDISDGLRK 120
           APIAVQLAYLQQLLGHTS+ASEAYKDIINRDLADESSLAVAVNNLIALKGPKDISDGLRK
Sbjct: 229 APIAVQLAYLQQLLGHTSDASEAYKDIINRDLADESSLAVAVNNLIALKGPKDISDGLRK 288

Query: 121 LDKLKEKDAPNFRLARGLEPKISQKQRETIYANRLLLLLHANKMDQAREIVATMADMFPN 180
           LDKLKEKDAPNFRLA GLEPKISQKQRETIYANRLLLLLHANKMDQARE+VA MADMFPN
Sbjct: 289 LDKLKEKDAPNFRLAHGLEPKISQKQRETIYANRLLLLLHANKMDQAREMVANMADMFPN 348

Query: 181 SVTPVLLQAAVLVRENKAGKAEEILGQFAQNFPDKSKLVLLARAQVAAAAGHPHVAFESL 240
           SVTPVLLQAAVLVRENKAGKAEEILGQFA+NFPDKSKLVLLARAQVAAAAGHPH+AFESL
Sbjct: 349 SVTPVLLQAAVLVRENKAGKAEEILGQFAENFPDKSKLVLLARAQVAAAAGHPHIAFESL 408

Query: 241 SKIHDIQHMPATIATLVALKERAGDVDGAIAVLDSAVKWWSNAMTEDNKLDVVLQEAASF 300
           SKI DIQHMPATIATLV+LKERAGDVDGAIAVLDSAVKWWSNAM+EDNKLD+VLQEAASF
Sbjct: 409 SKIQDIQHMPATIATLVSLKERAGDVDGAIAVLDSAVKWWSNAMSEDNKLDIVLQEAASF 468

Query: 301 KLKHGHEEEAAKLYEELVKTHGSIEALAGLVKTVARVDIKKAETYEKQLKPLLGLKEVDV 360
           KLKHG EE+AAKLYEELVKTHGSIEALAGLVKTVARVDIKKAETYEKQLKPL GLKEVDV
Sbjct: 469 KLKHGREEDAAKLYEELVKTHGSIEALAGLVKTVARVDIKKAETYEKQLKPLPGLKEVDV 528

Query: 361 ENLERTSGAKHVENAADLGASDAYMVDKNKTKSKKKRKRKPRYPKGFDPANPGPPPDPER 420
           ENLERTSGAKHVEN AD GASDAYMVDKNKTKSKKKRKRKPRYPKGFDPANPGPPPDPER
Sbjct: 529 ENLERTSGAKHVENGADHGASDAYMVDKNKTKSKKKRKRKPRYPKGFDPANPGPPPDPER 588

Query: 421 WLPRRERSSYRPKRKDKRAAQVRGSQGAVVREKHETSVSGGSSNNANSKSNQATSSKGTN 480
           WLPRRERSSYRPKRKDKRAAQVRGSQGA+VREKHETSVSGGSSNNANSKSNQA SSKGTN
Sbjct: 589 WLPRRERSSYRPKRKDKRAAQVRGSQGAMVREKHETSVSGGSSNNANSKSNQAMSSKGTN 648

Query: 481 QNTGSEQSKPSSKSSKKKSRN 502
           QNT  EQSKP SKSSKKKSRN
Sbjct: 649 QNT--EQSKPPSKSSKKKSRN 667

[Close]

BLAST of PI0004000 vs. ExPASy TrEMBL
Match: A0A6J1K7X5 (Signal recognition particle subunit SRP72 OS=Cucurbita maxima OX=3661 GN=LOC111492482 PE=3 SV=1)

HSP 1 Score: 882.1 bits (2278), Expect = 1.1e-252
Identity = 473/501 (94.41%), Postives = 492/501 (98.20%), Query Frame = 0


Query: 1   MEALRVKATSSFELAYNTACSLVDVNKYTDAEQLLLSARRIGQETLMEENLPDEDIEIEL 60
           MEALRVKATSSFELAYNTACSLVDVNKYTDAEQLLLSARRIGQETLMEENLPDEDIEIEL
Sbjct: 169 MEALRVKATSSFELAYNTACSLVDVNKYTDAEQLLLSARRIGQETLMEENLPDEDIEIEL 228

Query: 61  APIAVQLAYLQQLLGHTSEASEAYKDIINRDLADESSLAVAVNNLIALKGPKDISDGLRK 120
           APIAVQLAYLQQLLGHTSEASEAY+DI+NRDLADESSLAVAVNNLIALKGPKDISDGLRK
Sbjct: 229 APIAVQLAYLQQLLGHTSEASEAYRDIMNRDLADESSLAVAVNNLIALKGPKDISDGLRK 288

Query: 121 LDKLKEKDAPNFRLARGLEPKISQKQRETIYANRLLLLLHANKMDQAREIVATMADMFPN 180
           LDKLK+KDAPNFRLARGLEPKISQKQRETIYANRLLLLLHANKMDQARE+VAT+ADMFPN
Sbjct: 289 LDKLKDKDAPNFRLARGLEPKISQKQRETIYANRLLLLLHANKMDQAREMVATLADMFPN 348

Query: 181 SVTPVLLQAAVLVRENKAGKAEEILGQFAQNFPDKSKLVLLARAQVAAAAGHPHVAFESL 240
           SVTP+LLQAAVLVRENKAGKAEEILGQFA+NFPDKSKLVLLARAQ+AAAAGHPHVAFESL
Sbjct: 349 SVTPLLLQAAVLVRENKAGKAEEILGQFAENFPDKSKLVLLARAQIAAAAGHPHVAFESL 408

Query: 241 SKIHDIQHMPATIATLVALKERAGDVDGAIAVLDSAVKWWSNAMTEDNKLDVVLQEAASF 300
           SKI DIQHMPAT+ATLV+LKERAGDVDGAIAVLDSAVKWWSNAMTEDNKLDVVLQEAASF
Sbjct: 409 SKIQDIQHMPATVATLVSLKERAGDVDGAIAVLDSAVKWWSNAMTEDNKLDVVLQEAASF 468

Query: 301 KLKHGHEEEAAKLYEELVKTHGSIEALAGLVKTVARVDIKKAETYEKQLKPLLGLKEVDV 360
           KL+HG EE+AAKLYEELVKTHGSIEALAGLVKTVARVDIKKAETYEKQLKPL GLK VDV
Sbjct: 469 KLRHGREEDAAKLYEELVKTHGSIEALAGLVKTVARVDIKKAETYEKQLKPLPGLKTVDV 528

Query: 361 ENLERTSGAKHVENAADLGASDAYMVDKNKTKSKKKRKRKPRYPKGFDPANPGPPPDPER 420
           ENLE+TSGAKHVE+AADLGASDAYMVDK+K KSKKKRKRKPRYPKGFDPANPGPPPDPER
Sbjct: 529 ENLEKTSGAKHVESAADLGASDAYMVDKSKAKSKKKRKRKPRYPKGFDPANPGPPPDPER 588

Query: 421 WLPRRERSSYRPKRKDKRAAQVRGSQGAVVREKHETSVSGGSSNNANSKSNQATSSKGTN 480
           WLPRRERSSYRPKRKDKRAAQVRGSQGAV REKH++ VSGGSSNNA+SKSNQATSSK TN
Sbjct: 589 WLPRRERSSYRPKRKDKRAAQVRGSQGAVAREKHDSGVSGGSSNNADSKSNQATSSKATN 648

Query: 481 QNTGSEQSKPSSKSSKKKSRN 502
           QNTGS QS+PSSKSSKKKSRN
Sbjct: 649 QNTGSNQSRPSSKSSKKKSRN 669

[Close]

BLAST of PI0004000 vs. ExPASy TrEMBL
Match: A0A6J1GY38 (Signal recognition particle subunit SRP72 OS=Cucurbita moschata OX=3662 GN=LOC111458544 PE=3 SV=1)

HSP 1 Score: 878.6 bits (2269), Expect = 1.2e-251
Identity = 471/501 (94.01%), Postives = 491/501 (98.00%), Query Frame = 0


Query: 1   MEALRVKATSSFELAYNTACSLVDVNKYTDAEQLLLSARRIGQETLMEENLPDEDIEIEL 60
           MEALRVKATSSFELAYNTACSLVDVNKYTDAEQLLLSARRIGQETLMEENLPDEDIEIEL
Sbjct: 169 MEALRVKATSSFELAYNTACSLVDVNKYTDAEQLLLSARRIGQETLMEENLPDEDIEIEL 228

Query: 61  APIAVQLAYLQQLLGHTSEASEAYKDIINRDLADESSLAVAVNNLIALKGPKDISDGLRK 120
           APIAVQLAYLQQLLGHTSEAS+AY+DIINRDLADESSLAVAVNNLIALKGPKDISDGLRK
Sbjct: 229 APIAVQLAYLQQLLGHTSEASDAYRDIINRDLADESSLAVAVNNLIALKGPKDISDGLRK 288

Query: 121 LDKLKEKDAPNFRLARGLEPKISQKQRETIYANRLLLLLHANKMDQAREIVATMADMFPN 180
           LDKLK+KDAPNFRLARGLEPKISQKQRETIYANRLLLLLHANKMDQARE+VAT+ADMFPN
Sbjct: 289 LDKLKDKDAPNFRLARGLEPKISQKQRETIYANRLLLLLHANKMDQAREMVATLADMFPN 348

Query: 181 SVTPVLLQAAVLVRENKAGKAEEILGQFAQNFPDKSKLVLLARAQVAAAAGHPHVAFESL 240
           SVTP+LLQAAVLVRENKAGKAEEILGQFA+NFPDKSKLVLLARAQ+AAAAGHPH+AFESL
Sbjct: 349 SVTPLLLQAAVLVRENKAGKAEEILGQFAENFPDKSKLVLLARAQIAAAAGHPHIAFESL 408

Query: 241 SKIHDIQHMPATIATLVALKERAGDVDGAIAVLDSAVKWWSNAMTEDNKLDVVLQEAASF 300
           SKI DIQHMPAT+ATLV+LKERAGDVDGAIAVLDSAVKWWSNAMTEDNKLDVVLQEAASF
Sbjct: 409 SKIQDIQHMPATVATLVSLKERAGDVDGAIAVLDSAVKWWSNAMTEDNKLDVVLQEAASF 468

Query: 301 KLKHGHEEEAAKLYEELVKTHGSIEALAGLVKTVARVDIKKAETYEKQLKPLLGLKEVDV 360
           KL+HG EE+AAKLYEELVKTHGSIEALAGLVKTVARVDIKKAETYEKQLKPL GLK VDV
Sbjct: 469 KLRHGREEDAAKLYEELVKTHGSIEALAGLVKTVARVDIKKAETYEKQLKPLPGLKTVDV 528

Query: 361 ENLERTSGAKHVENAADLGASDAYMVDKNKTKSKKKRKRKPRYPKGFDPANPGPPPDPER 420
           ENLE+TSGAKHVE+AADLGASDAYMVDK+K KSKKKRKRKPRYPKGFDPANPGPPPDPER
Sbjct: 529 ENLEKTSGAKHVESAADLGASDAYMVDKSKAKSKKKRKRKPRYPKGFDPANPGPPPDPER 588

Query: 421 WLPRRERSSYRPKRKDKRAAQVRGSQGAVVREKHETSVSGGSSNNANSKSNQATSSKGTN 480
           WLPRRERSSYRPKRKDKRAAQVRGSQGAV REKH++ VSGGSSNNA+SKSNQATSSK TN
Sbjct: 589 WLPRRERSSYRPKRKDKRAAQVRGSQGAVAREKHDSGVSGGSSNNADSKSNQATSSKATN 648

Query: 481 QNTGSEQSKPSSKSSKKKSRN 502
           QNTGS QS+ SSKSSKKKSRN
Sbjct: 649 QNTGSNQSRSSSKSSKKKSRN 669

[Close]

BLAST of PI0004000 vs. NCBI nr
Match: XP_008446092.1 (PREDICTED: signal recognition particle subunit SRP72 [Cucumis melo] >KAA0034222.1 signal recognition particle subunit SRP72 [Cucumis melo var. makuwa] >TYK15698.1 signal recognition particle subunit SRP72 [Cucumis melo var. makuwa])

HSP 1 Score: 897.1 bits (2317), Expect = 6.8e-257
Identity = 486/501 (97.01%), Postives = 494/501 (98.60%), Query Frame = 0


Query: 1   MEALRVKATSSFELAYNTACSLVDVNKYTDAEQLLLSARRIGQETLMEENLPDEDIEIEL 60
           MEALRVKATSSFELAYNTACSLVDVNKYTDAEQLLLSARRIGQETLMEENLPDEDIEIEL
Sbjct: 169 MEALRVKATSSFELAYNTACSLVDVNKYTDAEQLLLSARRIGQETLMEENLPDEDIEIEL 228

Query: 61  APIAVQLAYLQQLLGHTSEASEAYKDIINRDLADESSLAVAVNNLIALKGPKDISDGLRK 120
           APIAVQLAYLQQLLGHTSEASEAYKDIINRDLADESSLAVAVNNLIALKGPKDISDGLRK
Sbjct: 229 APIAVQLAYLQQLLGHTSEASEAYKDIINRDLADESSLAVAVNNLIALKGPKDISDGLRK 288

Query: 121 LDKLKEKDAPNFRLARGLEPKISQKQRETIYANRLLLLLHANKMDQAREIVATMADMFPN 180
           LDKLKEKDAPNFRLARGLEPKISQKQRE IYANRLLLLLHANKMDQARE+VA MADMFPN
Sbjct: 289 LDKLKEKDAPNFRLARGLEPKISQKQREAIYANRLLLLLHANKMDQAREMVANMADMFPN 348

Query: 181 SVTPVLLQAAVLVRENKAGKAEEILGQFAQNFPDKSKLVLLARAQVAAAAGHPHVAFESL 240
           SVTPVLLQAAVLVRENKAGKAEEILGQFA+NFPDKSKLVLLARAQVAAAAGHPH+AFESL
Sbjct: 349 SVTPVLLQAAVLVRENKAGKAEEILGQFAENFPDKSKLVLLARAQVAAAAGHPHIAFESL 408

Query: 241 SKIHDIQHMPATIATLVALKERAGDVDGAIAVLDSAVKWWSNAMTEDNKLDVVLQEAASF 300
           SKI DIQHMPAT+ATLV+LKERAGDV+GAIAVLDSAVKWWSNAMTEDNKLDVVLQEAASF
Sbjct: 409 SKIQDIQHMPATVATLVSLKERAGDVEGAIAVLDSAVKWWSNAMTEDNKLDVVLQEAASF 468

Query: 301 KLKHGHEEEAAKLYEELVKTHGSIEALAGLVKTVARVDIKKAETYEKQLKPLLGLKEVDV 360
           KLKHG EE+AAKLYEELVKTHGSIEALAGLVKTVARVDIKKAETYEKQLKPL GLKEVDV
Sbjct: 469 KLKHGREEDAAKLYEELVKTHGSIEALAGLVKTVARVDIKKAETYEKQLKPLPGLKEVDV 528

Query: 361 ENLERTSGAKHVENAADLGASDAYMVDKNKTKSKKKRKRKPRYPKGFDPANPGPPPDPER 420
           ENLERTSGAKHVENAADLGASDAYMVDKNKTKSKKKRKRKPRYPKGFDPANPGPPPDPER
Sbjct: 529 ENLERTSGAKHVENAADLGASDAYMVDKNKTKSKKKRKRKPRYPKGFDPANPGPPPDPER 588

Query: 421 WLPRRERSSYRPKRKDKRAAQVRGSQGAVVREKHETSVSGGSSNNANSKSNQATSSKGTN 480
           WLPRRERSSYRPKRKDKRAAQVRGSQGAVVREKHET+VSGGSSNNANSKSNQATSSKGTN
Sbjct: 589 WLPRRERSSYRPKRKDKRAAQVRGSQGAVVREKHETNVSGGSSNNANSKSNQATSSKGTN 648

Query: 481 QNTGSEQSKPSSKSSKKKSRN 502
           QNT  EQSKPSSKSSKKKSRN
Sbjct: 649 QNT--EQSKPSSKSSKKKSRN 667

[Close]

BLAST of PI0004000 vs. NCBI nr
Match: XP_004135297.1 (signal recognition particle subunit SRP72 [Cucumis sativus] >KGN51704.1 hypothetical protein Csa_008049 [Cucumis sativus])

HSP 1 Score: 887.5 bits (2292), Expect = 5.4e-254
Identity = 481/501 (96.01%), Postives = 490/501 (97.80%), Query Frame = 0


Query: 1   MEALRVKATSSFELAYNTACSLVDVNKYTDAEQLLLSARRIGQETLMEENLPDEDIEIEL 60
           MEALRVKATSSFELAYNTACSLVDVNKYTDAEQLLLSARRIGQETLMEENLPDEDIEIEL
Sbjct: 169 MEALRVKATSSFELAYNTACSLVDVNKYTDAEQLLLSARRIGQETLMEENLPDEDIEIEL 228

Query: 61  APIAVQLAYLQQLLGHTSEASEAYKDIINRDLADESSLAVAVNNLIALKGPKDISDGLRK 120
           APIAVQLAYLQQLLGHTS+ASEAYKDIINRDLADESSLAVAVNNLIALKGPKDISDGLRK
Sbjct: 229 APIAVQLAYLQQLLGHTSDASEAYKDIINRDLADESSLAVAVNNLIALKGPKDISDGLRK 288

Query: 121 LDKLKEKDAPNFRLARGLEPKISQKQRETIYANRLLLLLHANKMDQAREIVATMADMFPN 180
           LDKLKEKDAPNFRLA GLEPKISQKQRETIYANRLLLLLHANKMDQARE+VA MADMFPN
Sbjct: 289 LDKLKEKDAPNFRLAHGLEPKISQKQRETIYANRLLLLLHANKMDQAREMVANMADMFPN 348

Query: 181 SVTPVLLQAAVLVRENKAGKAEEILGQFAQNFPDKSKLVLLARAQVAAAAGHPHVAFESL 240
           SVTPVLLQAAVLVRENKAGKAEEILGQFA+NFPDKSKLVLLARAQVAAAAGHPH+AFESL
Sbjct: 349 SVTPVLLQAAVLVRENKAGKAEEILGQFAENFPDKSKLVLLARAQVAAAAGHPHIAFESL 408

Query: 241 SKIHDIQHMPATIATLVALKERAGDVDGAIAVLDSAVKWWSNAMTEDNKLDVVLQEAASF 300
           SKI DIQHMPATIATLV+LKERAGDVDGAIAVLDSAVKWWSNAM+EDNKLD+VLQEAASF
Sbjct: 409 SKIQDIQHMPATIATLVSLKERAGDVDGAIAVLDSAVKWWSNAMSEDNKLDIVLQEAASF 468

Query: 301 KLKHGHEEEAAKLYEELVKTHGSIEALAGLVKTVARVDIKKAETYEKQLKPLLGLKEVDV 360
           KLKHG EE+AAKLYEELVKTHGSIEALAGLVKTVARVDIKKAETYEKQLKPL GLKEVDV
Sbjct: 469 KLKHGREEDAAKLYEELVKTHGSIEALAGLVKTVARVDIKKAETYEKQLKPLPGLKEVDV 528

Query: 361 ENLERTSGAKHVENAADLGASDAYMVDKNKTKSKKKRKRKPRYPKGFDPANPGPPPDPER 420
           ENLERTSGAKHVEN AD GASDAYMVDKNKTKSKKKRKRKPRYPKGFDPANPGPPPDPER
Sbjct: 529 ENLERTSGAKHVENGADHGASDAYMVDKNKTKSKKKRKRKPRYPKGFDPANPGPPPDPER 588

Query: 421 WLPRRERSSYRPKRKDKRAAQVRGSQGAVVREKHETSVSGGSSNNANSKSNQATSSKGTN 480
           WLPRRERSSYRPKRKDKRAAQVRGSQGA+VREKHETSVSGGSSNNANSKSNQA SSKGTN
Sbjct: 589 WLPRRERSSYRPKRKDKRAAQVRGSQGAMVREKHETSVSGGSSNNANSKSNQAMSSKGTN 648

Query: 481 QNTGSEQSKPSSKSSKKKSRN 502
           QNT  EQSKP SKSSKKKSRN
Sbjct: 649 QNT--EQSKPPSKSSKKKSRN 667

[Close]

BLAST of PI0004000 vs. NCBI nr
Match: XP_038892751.1 (signal recognition particle subunit SRP72-like [Benincasa hispida])

HSP 1 Score: 885.9 bits (2288), Expect = 1.6e-253
Identity = 480/501 (95.81%), Postives = 491/501 (98.00%), Query Frame = 0


Query: 1   MEALRVKATSSFELAYNTACSLVDVNKYTDAEQLLLSARRIGQETLMEENLPDEDIEIEL 60
           MEALRVKATSSFELAYNTACSLVD+NKYTDAEQLLLSARRIGQETLMEENLPDEDIEIEL
Sbjct: 169 MEALRVKATSSFELAYNTACSLVDMNKYTDAEQLLLSARRIGQETLMEENLPDEDIEIEL 228

Query: 61  APIAVQLAYLQQLLGHTSEASEAYKDIINRDLADESSLAVAVNNLIALKGPKDISDGLRK 120
           APIAVQLAYLQQLLGHTSEASEAYKDIINRDLADESSLAVAVNNLIALKGPKDISDGLRK
Sbjct: 229 APIAVQLAYLQQLLGHTSEASEAYKDIINRDLADESSLAVAVNNLIALKGPKDISDGLRK 288

Query: 121 LDKLKEKDAPNFRLARGLEPKISQKQRETIYANRLLLLLHANKMDQAREIVATMADMFPN 180
           LDKLKEKDAPNFRLARGLEPKISQKQRETIYANRLLLLLHANKMDQARE+VA +A+MFPN
Sbjct: 289 LDKLKEKDAPNFRLARGLEPKISQKQRETIYANRLLLLLHANKMDQAREMVAMLAEMFPN 348

Query: 181 SVTPVLLQAAVLVRENKAGKAEEILGQFAQNFPDKSKLVLLARAQVAAAAGHPHVAFESL 240
           SVTPVLLQAAVLVRENKAGKAEEILGQFA+NFPDKSKLVLLARAQVAAAAGHPH+AFESL
Sbjct: 349 SVTPVLLQAAVLVRENKAGKAEEILGQFAENFPDKSKLVLLARAQVAAAAGHPHIAFESL 408

Query: 241 SKIHDIQHMPATIATLVALKERAGDVDGAIAVLDSAVKWWSNAMTEDNKLDVVLQEAASF 300
           SKI DIQHMPATIATLV+LKERAGD+DGAIAVLDSAVKWWSNAM EDNKLDVVLQEAASF
Sbjct: 409 SKIQDIQHMPATIATLVSLKERAGDIDGAIAVLDSAVKWWSNAMIEDNKLDVVLQEAASF 468

Query: 301 KLKHGHEEEAAKLYEELVKTHGSIEALAGLVKTVARVDIKKAETYEKQLKPLLGLKEVDV 360
           KLKHG EE+AAKLYEELVK+HGSIEALAGLVKTVARVDIKKAETYEKQLK L GLKEVDV
Sbjct: 469 KLKHGREEDAAKLYEELVKSHGSIEALAGLVKTVARVDIKKAETYEKQLKSLPGLKEVDV 528

Query: 361 ENLERTSGAKHVENAADLGASDAYMVDKNKTKSKKKRKRKPRYPKGFDPANPGPPPDPER 420
           ENLERTS AKHVE+AADLGASDAYMVDKNKTKSKKKRKRKPRYPKGFDPANPGPPPDPER
Sbjct: 529 ENLERTSRAKHVESAADLGASDAYMVDKNKTKSKKKRKRKPRYPKGFDPANPGPPPDPER 588

Query: 421 WLPRRERSSYRPKRKDKRAAQVRGSQGAVVREKHETSVSGGSSNNANSKSNQATSSKGTN 480
           WLPRRERSSYRPKRKDKRAAQVRGSQGAVVREKHET VSG SSNNANSKSNQATSSKGTN
Sbjct: 589 WLPRRERSSYRPKRKDKRAAQVRGSQGAVVREKHETGVSGASSNNANSKSNQATSSKGTN 648

Query: 481 QNTGSEQSKPSSKSSKKKSRN 502
           QNTGSEQSK SSKSSKKKSRN
Sbjct: 649 QNTGSEQSKHSSKSSKKKSRN 669

[Close]

BLAST of PI0004000 vs. NCBI nr
Match: XP_022997601.1 (signal recognition particle subunit SRP72-like [Cucurbita maxima])

HSP 1 Score: 882.1 bits (2278), Expect = 2.3e-252
Identity = 473/501 (94.41%), Postives = 492/501 (98.20%), Query Frame = 0


Query: 1   MEALRVKATSSFELAYNTACSLVDVNKYTDAEQLLLSARRIGQETLMEENLPDEDIEIEL 60
           MEALRVKATSSFELAYNTACSLVDVNKYTDAEQLLLSARRIGQETLMEENLPDEDIEIEL
Sbjct: 169 MEALRVKATSSFELAYNTACSLVDVNKYTDAEQLLLSARRIGQETLMEENLPDEDIEIEL 228

Query: 61  APIAVQLAYLQQLLGHTSEASEAYKDIINRDLADESSLAVAVNNLIALKGPKDISDGLRK 120
           APIAVQLAYLQQLLGHTSEASEAY+DI+NRDLADESSLAVAVNNLIALKGPKDISDGLRK
Sbjct: 229 APIAVQLAYLQQLLGHTSEASEAYRDIMNRDLADESSLAVAVNNLIALKGPKDISDGLRK 288

Query: 121 LDKLKEKDAPNFRLARGLEPKISQKQRETIYANRLLLLLHANKMDQAREIVATMADMFPN 180
           LDKLK+KDAPNFRLARGLEPKISQKQRETIYANRLLLLLHANKMDQARE+VAT+ADMFPN
Sbjct: 289 LDKLKDKDAPNFRLARGLEPKISQKQRETIYANRLLLLLHANKMDQAREMVATLADMFPN 348

Query: 181 SVTPVLLQAAVLVRENKAGKAEEILGQFAQNFPDKSKLVLLARAQVAAAAGHPHVAFESL 240
           SVTP+LLQAAVLVRENKAGKAEEILGQFA+NFPDKSKLVLLARAQ+AAAAGHPHVAFESL
Sbjct: 349 SVTPLLLQAAVLVRENKAGKAEEILGQFAENFPDKSKLVLLARAQIAAAAGHPHVAFESL 408

Query: 241 SKIHDIQHMPATIATLVALKERAGDVDGAIAVLDSAVKWWSNAMTEDNKLDVVLQEAASF 300
           SKI DIQHMPAT+ATLV+LKERAGDVDGAIAVLDSAVKWWSNAMTEDNKLDVVLQEAASF
Sbjct: 409 SKIQDIQHMPATVATLVSLKERAGDVDGAIAVLDSAVKWWSNAMTEDNKLDVVLQEAASF 468

Query: 301 KLKHGHEEEAAKLYEELVKTHGSIEALAGLVKTVARVDIKKAETYEKQLKPLLGLKEVDV 360
           KL+HG EE+AAKLYEELVKTHGSIEALAGLVKTVARVDIKKAETYEKQLKPL GLK VDV
Sbjct: 469 KLRHGREEDAAKLYEELVKTHGSIEALAGLVKTVARVDIKKAETYEKQLKPLPGLKTVDV 528

Query: 361 ENLERTSGAKHVENAADLGASDAYMVDKNKTKSKKKRKRKPRYPKGFDPANPGPPPDPER 420
           ENLE+TSGAKHVE+AADLGASDAYMVDK+K KSKKKRKRKPRYPKGFDPANPGPPPDPER
Sbjct: 529 ENLEKTSGAKHVESAADLGASDAYMVDKSKAKSKKKRKRKPRYPKGFDPANPGPPPDPER 588

Query: 421 WLPRRERSSYRPKRKDKRAAQVRGSQGAVVREKHETSVSGGSSNNANSKSNQATSSKGTN 480
           WLPRRERSSYRPKRKDKRAAQVRGSQGAV REKH++ VSGGSSNNA+SKSNQATSSK TN
Sbjct: 589 WLPRRERSSYRPKRKDKRAAQVRGSQGAVAREKHDSGVSGGSSNNADSKSNQATSSKATN 648

Query: 481 QNTGSEQSKPSSKSSKKKSRN 502
           QNTGS QS+PSSKSSKKKSRN
Sbjct: 649 QNTGSNQSRPSSKSSKKKSRN 669

[Close]

BLAST of PI0004000 vs. NCBI nr
Match: KAG6601574.1 (Signal recognition particle subunit SRP72, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 879.8 bits (2272), Expect = 1.1e-251
Identity = 472/501 (94.21%), Postives = 491/501 (98.00%), Query Frame = 0


Query: 1   MEALRVKATSSFELAYNTACSLVDVNKYTDAEQLLLSARRIGQETLMEENLPDEDIEIEL 60
           MEALRVKATSSFELAYNTACSLVDVNKYTDAEQLLLSARRIGQETLMEENLPDEDIEIEL
Sbjct: 169 MEALRVKATSSFELAYNTACSLVDVNKYTDAEQLLLSARRIGQETLMEENLPDEDIEIEL 228

Query: 61  APIAVQLAYLQQLLGHTSEASEAYKDIINRDLADESSLAVAVNNLIALKGPKDISDGLRK 120
           APIAVQLAYLQQLLGHTSEASEAY+DIINRDLADESSLAVAVNNLIALKGPKDISDGLRK
Sbjct: 229 APIAVQLAYLQQLLGHTSEASEAYRDIINRDLADESSLAVAVNNLIALKGPKDISDGLRK 288

Query: 121 LDKLKEKDAPNFRLARGLEPKISQKQRETIYANRLLLLLHANKMDQAREIVATMADMFPN 180
           LDKLK+KDAPNFRLARGLEPKISQKQRETIYANRLLLLLHANKMDQARE+VAT+ADMFPN
Sbjct: 289 LDKLKDKDAPNFRLARGLEPKISQKQRETIYANRLLLLLHANKMDQAREMVATLADMFPN 348

Query: 181 SVTPVLLQAAVLVRENKAGKAEEILGQFAQNFPDKSKLVLLARAQVAAAAGHPHVAFESL 240
           SVTP+LLQAAVLVRENKAGKAEEILGQFA+NFPDKSKLVLLARAQ+AAAAGHPH+AFESL
Sbjct: 349 SVTPLLLQAAVLVRENKAGKAEEILGQFAENFPDKSKLVLLARAQIAAAAGHPHIAFESL 408

Query: 241 SKIHDIQHMPATIATLVALKERAGDVDGAIAVLDSAVKWWSNAMTEDNKLDVVLQEAASF 300
           SKI DIQHMPAT+ATLV+LKERAGDVDGAIAVLDSAVKWWSNAMTEDNKLDVVLQEAASF
Sbjct: 409 SKIQDIQHMPATVATLVSLKERAGDVDGAIAVLDSAVKWWSNAMTEDNKLDVVLQEAASF 468

Query: 301 KLKHGHEEEAAKLYEELVKTHGSIEALAGLVKTVARVDIKKAETYEKQLKPLLGLKEVDV 360
           KL+HG EE+AAKLYEELVKTHGSIEALAGLVKTVARVDIKKAETYEKQLKPL GLK VDV
Sbjct: 469 KLRHGREEDAAKLYEELVKTHGSIEALAGLVKTVARVDIKKAETYEKQLKPLPGLKTVDV 528

Query: 361 ENLERTSGAKHVENAADLGASDAYMVDKNKTKSKKKRKRKPRYPKGFDPANPGPPPDPER 420
           ENLE+TSGAKHVE+AADLGASDAYMVDK+K KSKKKRKRKPRYPKGFDPANPGPPPDPER
Sbjct: 529 ENLEKTSGAKHVESAADLGASDAYMVDKSKAKSKKKRKRKPRYPKGFDPANPGPPPDPER 588

Query: 421 WLPRRERSSYRPKRKDKRAAQVRGSQGAVVREKHETSVSGGSSNNANSKSNQATSSKGTN 480
           WLPRRERSSYRPKRKDKRAAQVRGSQGAV REKH++ VSGGSSNNA+SKSNQATSSK TN
Sbjct: 589 WLPRRERSSYRPKRKDKRAAQVRGSQGAVAREKHDSGVSGGSSNNADSKSNQATSSKATN 648

Query: 481 QNTGSEQSKPSSKSSKKKSRN 502
           QNTGS QS+ SSKSSKKKSRN
Sbjct: 649 QNTGSNQSRSSSKSSKKKSRN 669

[Close]

BLAST of PI0004000 vs. TAIR 10
Match: AT1G67680.1 (SRP72 RNA-binding domain )

HSP 1 Score: 628.2 bits (1619), Expect = 5.5e-180
Identity = 343/502 (68.33%), Postives = 412/502 (82.07%), Query Frame = 0


Query: 1   MEALRVKATSSFELAYNTACSLVDVNKYTDAEQLLLSARRIGQETLMEEN--LPDEDIEI 60
           +E+L++K TSSFELAYNTACSL++ N Y DAEQLLL+ARRIGQETL +++  L DE+IEI
Sbjct: 180 LESLKIKPTSSFELAYNTACSLIENNNYADAEQLLLTARRIGQETLNDDDIALTDEEIEI 239

Query: 61  ELAPIAVQLAYLQQLLGHTSEASEAYKDIINRDLADESSLAVAVNNLIALKGPKDISDGL 120
           ELAPIAVQLAY+QQ+LG T E++ +Y D I R+LADE SLAVAVNNL+ALKG KDISDGL
Sbjct: 240 ELAPIAVQLAYVQQILGQTQESTSSYVDFIKRNLADEPSLAVAVNNLVALKGFKDISDGL 299

Query: 121 RKLDKLKEKDAPNFRLARGLEPKISQKQRETIYANRLLLLLHANKMDQAREIVATMADMF 180
           RK D LK+KD+  F+L++ L+ K+SQK +E IYANR+LLLLHANKMDQARE+ A +  MF
Sbjct: 300 RKFDLLKDKDSQTFQLSQALDAKLSQKHKEAIYANRVLLLLHANKMDQARELCAALPGMF 359

Query: 181 PNSVTPVLLQAAVLVRENKAGKAEEILGQFAQNFPDKSKLVLLARAQVAAAAGHPHVAFE 240
           P S+ P LLQAAVLVRENKA KAEE+LGQ A+ FP+KSKLVLLARAQ+AA+A HPHVA E
Sbjct: 360 PESIIPTLLQAAVLVRENKAAKAEELLGQCAEKFPEKSKLVLLARAQIAASASHPHVAAE 419

Query: 241 SLSKIHDIQHMPATIATLVALKERAGDVDGAIAVLDSAVKWWSNAMTEDNKLDVVLQEAA 300
           SLSKI DIQH+PAT+AT+VALKERAGD DGA AVLDSA+KWWSN+MTE +KL V++ EAA
Sbjct: 420 SLSKIPDIQHLPATVATIVALKERAGDNDGAAAVLDSAIKWWSNSMTESSKLRVLMPEAA 479

Query: 301 SFKLKHGHEEEAAKLYEELVKTHGSIEALAGLVKTVARVDIKKAETYEKQLKPLLGLKEV 360
           +FKL+HG EEEA++LYEE+VK H S +AL GLV T+ARV+++KAE+YEKQLKPL GLK V
Sbjct: 480 AFKLRHGQEEEASRLYEEIVKNHNSTDALVGLVTTLARVNVEKAESYEKQLKPLPGLKAV 539

Query: 361 DVENLERTSGAKHVENAADLGASDAYMVDKNKTKSKKKRKRKPRYPKGFDPANPGPPPDP 420
           DV+ LE+T GAK +E AA   + +    +  K K+K+KRKRKP+YPKGFDPANPGPPPDP
Sbjct: 540 DVDKLEKTYGAKPIEGAAASSSQE----EVKKEKAKRKRKRKPKYPKGFDPANPGPPPDP 599

Query: 421 ERWLPRRERSSYRPKRKDKRAAQVRGSQGAVVREKHETSVSGGSSNNANSKSNQATSSKG 480
           ERWLPRRERSSY+PKRKDKRAAQ+RGSQGAV ++K E + S        SKSNQ  SSKG
Sbjct: 600 ERWLPRRERSSYKPKRKDKRAAQIRGSQGAVTKDKQEAAPS-------TSKSNQVASSKG 659

Query: 481 TNQNTGSEQSKPSSKSSKKKSR 501
                      PSSK+SKKKSR
Sbjct: 660 -------NAPAPSSKASKKKSR 663

[Close]

BLAST of PI0004000 vs. TAIR 10
Match: AT1G67650.1 (SRP72 RNA-binding domain )

HSP 1 Score: 585.1 bits (1507), Expect = 5.3e-167
Identity = 324/500 (64.80%), Postives = 398/500 (79.60%), Query Frame = 0


Query: 1   MEALRVKATSSFELAYNTACSLVDVNKYTDAEQLLLSARRIGQETLMEENLPDEDIEIEL 60
           +E+L+++ T++++LAYNTACSL++ + Y DAEQLLL+A RIGQETL E +  D+ IE +L
Sbjct: 170 LESLKIRPTTTYQLAYNTACSLIENSNYVDAEQLLLTAMRIGQETLTEGDYSDDYIETQL 229

Query: 61  APIAVQLAYLQQLLGHTSEASEAYKDIINRDLADESSLAVAVNNLIALKGPKDISDGLRK 120
           API+VQLAY+QQ+LG T E+  +Y DII R+LADE SLA+AVNNL+ALKG KDISDGLRK
Sbjct: 230 APISVQLAYVQQVLGQTQESKSSYVDIIKRNLADE-SLALAVNNLVALKGSKDISDGLRK 289

Query: 121 LDKLKEKDAPNFRLARGLEPKISQKQRETIYANRLLLLLHANKMDQAREIVATMADMFPN 180
            D LK+KD+ NF+L++ L+ K+S K +E IYANR+LLLLHANKMDQARE+ AT+  MFP 
Sbjct: 290 FDLLKDKDSQNFQLSQELDAKLSHKHKEAIYANRVLLLLHANKMDQARELCATLPGMFPE 349

Query: 181 SVTPVLLQAAVLVRENKAGKAEEILGQFAQNFPDKSKLVLLARAQVAAAAGHPHVAFESL 240
           SV P LLQAAVLVRENKA KAEE+LGQ A+NFP+KSKLVLLARAQ+AA+A HPHVA ESL
Sbjct: 350 SVIPTLLQAAVLVRENKAAKAEELLGQCAENFPEKSKLVLLARAQIAASASHPHVAAESL 409

Query: 241 SKIHDIQHMPATIATLVALKERAGDVDGAIAVLDSAVKWWSNAMTEDNKLDVVLQEAASF 300
           SKI DIQH+PAT+AT+VAL+ERAGD DGA AVLDSA++WWS++MT+ N L +++  AA+F
Sbjct: 410 SKIPDIQHLPATVATIVALRERAGDNDGATAVLDSAIRWWSDSMTDSNMLRILMPVAAAF 469

Query: 301 KLKHGHEEEAAKLYEELVKTHGSIEALAGLVKTVARVDIKKAETYEKQLKPLLGLKEVDV 360
           KL+HG EEEA++LYEE+VK H S +AL GLV T+ARV+++KAE YEKQLKPL GLK VDV
Sbjct: 470 KLRHGQEEEASRLYEEIVKNHNSTDALVGLVTTLARVNVEKAEAYEKQLKPLPGLKAVDV 529

Query: 361 ENLERTSGAKHVENAADLGASDAYMVDKNKTKSKKKRKRKPRYPKGFDPANPGPPPDPER 420
           +NLE+TSGAK +E     G S A +  +   K K KRKRKP+YPKGFD  N GP PDPER
Sbjct: 530 DNLEKTSGAKPIE-----GISAASLSQEEVKKEKVKRKRKPKYPKGFDLENSGPTPDPER 589

Query: 421 WLPRRERSSYRPKRKDKRAAQVRGSQGAVVREKHETSVSGGSSNNANSKSNQATSSKGTN 480
           WLPRRERSSYRPKRKDKRAAQ+RGSQGA+ + K E + S        SKS QA  SK   
Sbjct: 590 WLPRRERSSYRPKRKDKRAAQIRGSQGALTKVKQEEAPS-------TSKSKQAAISK--- 649

Query: 481 QNTGSEQSKPSSKSSKKKSR 501
               +     SSK+SKKKSR
Sbjct: 650 ---ANAAGPSSSKASKKKSR 650

The following BLAST results are available for this feature:

BLAST of PI0004000 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P33731	1.7e-53	33.74	Signal recognition particle subunit SRP72 OS=Canis lupus familiaris OX=9615 GN=S...	[more]
O76094	1.1e-52	33.54	Signal recognition particle subunit SRP72 OS=Homo sapiens OX=9606 GN=SRP72 PE=1 ...	[more]
Q54EP7	4.0e-26	25.00	Signal recognition particle subunit SRP72 OS=Dictyostelium discoideum OX=44689 G...	[more]
P49965	1.7e-24	27.49	Signal recognition particle subunit SRP72 OS=Schistosoma mansoni OX=6183 GN=SRP7...	[more]
P91240	6.0e-22	27.27	Signal recognition particle subunit SRP72 OS=Caenorhabditis elegans OX=6239 GN=s...	[more]

BLAST of PI0004000 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7SSZ3	3.3e-257	97.01	Signal recognition particle subunit SRP72 OS=Cucumis melo var. makuwa OX=1194695...	[more]
A0A1S3BEX5	3.3e-257	97.01	Signal recognition particle subunit SRP72 OS=Cucumis melo OX=3656 GN=LOC10348892...	[more]
A0A0A0KS25	2.6e-254	96.01	Signal recognition particle subunit SRP72 OS=Cucumis sativus OX=3659 GN=Csa_5G59...	[more]
A0A6J1K7X5	1.1e-252	94.41	Signal recognition particle subunit SRP72 OS=Cucurbita maxima OX=3661 GN=LOC1114...	[more]
A0A6J1GY38	1.2e-251	94.01	Signal recognition particle subunit SRP72 OS=Cucurbita moschata OX=3662 GN=LOC11...	[more]

BLAST of PI0004000 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008446092.1	6.8e-257	97.01	PREDICTED: signal recognition particle subunit SRP72 [Cucumis melo] >KAA0034222....	[more]
XP_004135297.1	5.4e-254	96.01	signal recognition particle subunit SRP72 [Cucumis sativus] >KGN51704.1 hypothet...	[more]
XP_038892751.1	1.6e-253	95.81	signal recognition particle subunit SRP72-like [Benincasa hispida]	[more]
XP_022997601.1	2.3e-252	94.41	signal recognition particle subunit SRP72-like [Cucurbita maxima]	[more]
KAG6601574.1	1.1e-251	94.21	Signal recognition particle subunit SRP72, partial [Cucurbita argyrosperma subsp...	[more]

BLAST of PI0004000 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G67680.1	5.5e-180	68.33	SRP72 RNA-binding domain	[more]
AT1G67650.1	5.3e-167	64.80	SRP72 RNA-binding domain	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 2..351 e-value: 8.3E-15 score: 56.6
IPR011990	Tetratricopeptide-like helical domain superfamily	SUPERFAMILY	48452	TPR-like	coord: 64..320
IPR013699	Signal recognition particle, SRP72 subunit, RNA-binding	PFAM	PF08492	SRP72	coord: 388..432 e-value: 3.2E-17 score: 62.7
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 456..490
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 383..501
IPR026270	Signal recognition particle, SRP72 subunit	PANTHER	PTHR14094	SIGNAL RECOGNITION PARTICLE 72	coord: 3..500

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0004000.2	PI0004000.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006614	SRP-dependent cotranslational protein targeting to membrane
cellular_component	GO:0005786	signal recognition particle, endoplasmic reticulum targeting
cellular_component	GO:0048500	signal recognition particle
molecular_function	GO:0008312	7S RNA binding
molecular_function	GO:0005515	protein binding
molecular_function	GO:0043022	ribosome binding