PI0003967 (gene) Melon (PI 482460) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ACCTACACTTAAGCCTAGAAGAACATATGTTAAGATTTATCATATATTTAAAAAATATTTTTGTTCGTATCTTTAATCTTTTATAAACATCTCAAAAATACTTTAAAACATCTCAAAAATACTTTGAAGTAGAAATTTAGTAGAGTGGAAAATGAAAATTAGGACCTAAATTGTGATAGAATCCTAGTATGAAAATTAATGGTCGCATCTCAATTTTCATCCAACATTTTATCACTTTTTTTAATTTTCAACTTTGTTAGAAACAAAATGATATTTTCAATATTGCAATAAAAAACAGCTATGGTTTTATTGTCACTCTTAAACCCTTAAATCCTTCATCTCCATTTTCATTTGTTCCTCACCCCATGAATTCCCTTAATCGCATTCAAATTCTCTCTTCAATGAACAACAATCGAATTCTTCAAATGTTTCGCCAAATCAAACAACCCCACTTCGGTTCTTCCTTCCATGGCAGATCCTTCTCCACCAGATCTTCTTCTTCTTCTTCCTCTTCCTCTTCCTCCGGAGCTGGCAAGTTTAGCAATGGTGACGATGAATGGAACGATACTTGGGAATCCGCTTGGCTTCCTGAAGACCTTTCACCAAAGAACAAAGCGCCATGGGAGAGTGATGTGAACTTTCCGTCTGGAAACCCTACGGTTGTATTTCCGTCGGACGTTGATGCAGATACCAAAGCGTTTGTTGAAGATATGAATGAGAATTGGGATGAGAGGCGAAAGGCATCTAAAACGCAGAAACAAGGAGTGAATCGGGAAGAGAAGGGAGGTGATGGCGGCGGTGGGTCGCTTTATAGCTTGGAGAACATAAAGAAGGATTATAGATTGCAGAAACAGAGGATTCATGCTAATTTGTGGATGAAGGAGATTGAGAAGCAAGAGGAGGCTAGGTTGGGGGATTCCATTGCTGGCAGTGGGGATGACATTGAAAGATTGATGGATAGCTGCTCTGAGTGAGTTATTCTTTCTCTCTTGTTAAGTGCAAATGGTCTAAGCCTGATTTTGTGGTTTTTCTCTGCTGATCATATTATCTAGTGTAGATGTTTTGTTAATTGGATTGAGGAAGTAGTGTTTGGAATGTTGCAAGATGCCTGAATTTCTAGCATTGTTTTAATGGAAAACCAAAGTTTTGTTTGCAAATGTGAATGTATATTCTAGGGTTTACAAAATAGAACTAGCCCCATGAAAAGAGTCCCAAGTCTAACTAAAAAAAGGACTCCAATCTAAAAGAATAAGACCCAACTGACAATTACAAAAACGTGGCCGATGCCCATGGCCAGGTAAATGTGGTATTAAAGCTAACGACAGTGTTATGAAAACAACAAACAAAGAAAACTGAAAAATGTATAGAGTAGAGAAATCAACACAAAGATTTAAGGTGTTTATTAACCGTGTATTAGCTAAGTCCACGACAAAAGAAGAGAGCAACTTATTATTAGGAAGAAAATATCATATTACAGAGTCAAAAGCACTTTCATCAAAACTCTAGACCAAAATTGTAATGTAGATATGAATACAAATTAGTTGTTTGGCGTGCTATATAACATATTCATAGCACTTCAACAGAACTCATGCCTAAAAGATACTTAACAAGAACCCTTGTCATCAAGAATTGGCTTGGGTACCCTAAGCCAGCTAGAGATTAATGGTCTGGTCAAGAACATAATTCAAGGAGTGGCCACTCAAAATCTGTTCATATGAAAAAGAAACACAATAAGGAAAATACGTATGCAAGTCACTGCCTTGAAAATTTTTCTTTCTTTTCTTTTTGGTTCTTCTCTCCAAGCTCAACAAATCTAAACTGCTATGCTATGGTTGTAGGATTTTTGAATCGGTCAATGATGATTTAAACCATTCAAAAGTTCCAAGTTCTTCGGAGTTCAGGAATAAACCTGATGGATGGGAAACATTATCCAAAGGTCATGATGATAATGTATGGGAGATGACACAAAGAGAAGAAGACATTCTCCTGCAGGAGTTTGATCGTCGTATCGCGTACAACAAATTTCAGGTGCATACGATTTCCTTGTTTTGCTATTGTTACCACTTTAAACATATTTCTTCTGATGAGAGACAGAACATGTCATTAGAAAGATGAAATATACAGGGGAAGAGTACATCTAAAACACCAAAGGAATTTAAAAGAAAACTTGAGTAATCACATGAACGAAGCAAAGAATTCTAAGTGGAAGAGGAACAATACGAACATTTAAGTCAACTTACTGTTGCTCAATTGGTTCGGACGTATATGATTGATCAAGAGATCAGATGCCCCACCCTCACATATTGTTGAGCTCTATCTATTATACGAAACATTCAATAACTCTGTTGAAGATCATTCTCTGAGCTAGATTACTAAACTTGGAATGCATATAATCACAAGACTCTATGGCTTCTTCTCCTCGTATAATAACTAAATTATAGCACAGTTATTTACTGATACAATAATTAATCGCTCATGTTATCATGCCAACTAAATCCAGAGGTCTAGTATGCATATAACATATTAACATGGAATTCAGAACTCAAAATTTTCTGACTTTCTGGTTGTTTGCGGCTGTCAAATTCAGACCAATTCACATAGAACGCGATGAAAAATTACTACTCTAGAGAAATCATGGAAGAAAACTGTAACCGGTTCTTCGATAACAGGACTAGTGTTATTGCATTGTTTACAGTAGAAAATGATTAATGAAGGGTTGAAAATTTGATGTTACAATCATAAAATATTCTTTAATCAAGGATACCATCACATTCGTTTGAAGTTCAAAACACCCCCTCCATGTTTTCCCTCTGCACTGTTGCTTCTTCAAAGGAACAATCTAGAATGAGATTCCACTGATTTTTGAATTCATTGCTTCGGATTTTCTTTTCATTTTATGAAACTCCCTCTCTTTAGTGTACCCGTTACCAAGTTCCTTGGTTTTATATGCAGATTGCTAGTTTCATCAAGACCCATATATTTAGTCGTCGGAGACCAATCGATGGATGGAAATACATGATAGAGGAATTTGGGCCAAATGCTAGGAAAGGAAAAGGTAGTGTTTCAAGGTTGCCTAATCTTTCTGATTCTTCAACCCAACCCTTCAAGGAGGAAAAAGTTGTAGCCTCCCCTTCTCTCAAACCCTTGAGGAGGATTTAACTCTCTACAAACTACTTATTGGATAATATGTGATTCTGAAAAAGTTTGCAACCACTAGAAAAGCCCCCAAGTACCCCAAGTACAATATTATGTTGCCAACAAAAGCTCTGCCCAACTGACAGACCTGTATGTACTTGAAGATAAGAAGTTCGGGGTTCAAATCTCTAATCCCCAATTTGTATTAGAAAAAAGTATAATGTTATGTTGGTCATATTGATGTTTGTAAGTAACGATTTTAATACAAGTTTGTCTGCCTAGAAATTAGAATGTTATAAAGAAAAAATGAAAGTTTTACACTTGGTTCATAGAAGGAAAATGAGTTTTAATCTA ACCTACACTTAAGCCTAGAAGAACATATGTTAAGATTTATCATATATTTAAAAAATATTTTTGTTCGTATCTTTAATCTTTTATAAACATCTCAAAAATACTTTAAAACATCTCAAAAATACTTTGAAGTAGAAATTTAGTAGAGTGGAAAATGAAAATTAGGACCTAAATTGTGATAGAATCCTAGTATGAAAATTAATGGTCGCATCTCAATTTTCATCCAACATTTTATCACTTTTTTTAATTTTCAACTTTGTTAGAAACAAAATGATATTTTCAATATTGCAATAAAAAACAGCTATGGTTTTATTGTCACTCTTAAACCCTTAAATCCTTCATCTCCATTTTCATTTGTTCCTCACCCCATGAATTCCCTTAATCGCATTCAAATTCTCTCTTCAATGAACAACAATCGAATTCTTCAAATGTTTCGCCAAATCAAACAACCCCACTTCGGTTCTTCCTTCCATGGCAGATCCTTCTCCACCAGATCTTCTTCTTCTTCTTCCTCTTCCTCTTCCTCCGGAGCTGGCAAGTTTAGCAATGGTGACGATGAATGGAACGATACTTGGGAATCCGCTTGGCTTCCTGAAGACCTTTCACCAAAGAACAAAGCGCCATGGGAGAGTGATGTGAACTTTCCGTCTGGAAACCCTACGGTTGTATTTCCGTCGGACGTTGATGCAGATACCAAAGCGTTTGTTGAAGATATGAATGAGAATTGGGATGAGAGGCGAAAGGCATCTAAAACGCAGAAACAAGGAGTGAATCGGGAAGAGAAGGGAGGTGATGGCGGCGGTGGGTCGCTTTATAGCTTGGAGAACATAAAGAAGGATTATAGATTGCAGAAACAGAGGATTCATGCTAATTTGTGGATGAAGGAGATTGAGAAGCAAGAGGAGGCTAGGTTGGGGGATTCCATTGCTGGCAGTGGGGATGACATTGAAAGATTGATGGATAGCTGCTCTGAGATTTTTGAATCGGTCAATGATGATTTAAACCATTCAAAAGTTCCAAGTTCTTCGGAGTTCAGGAATAAACCTGATGGATGGGAAACATTATCCAAAGGTCATGATGATAATGTATGGGAGATGACACAAAGAGAAGAAGACATTCTCCTGCAGGAGTTTGATCGTCGTATCGCGTACAACAAATTTCAGATTGCTAGTTTCATCAAGACCCATATATTTAGTCGTCGGAGACCAATCGATGGATGGAAATACATGATAGAGGAATTTGGGCCAAATGCTAGGAAAGGAAAAGGTAGTGTTTCAAGGTTGCCTAATCTTTCTGATTCTTCAACCCAACCCTTCAAGGAGGAAAAAGTTGTAGCCTCCCCTTCTCTCAAACCCTTGAGGAGGATTTAACTCTCTACAAACTACTTATTGGATAATATGTGATTCTGAAAAAGTTTGCAACCACTAGAAAAGCCCCCAAGTACCCCAAGTACAATATTATGTTGCCAACAAAAGCTCTGCCCAACTGACAGACCTGTATGTACTTGAAGATAAGAAGTTCGGGGTTCAAATCTCTAATCCCCAATTTGTATTAGAAAAAAGTATAATGTTATGTTGGTCATATTGATGTTTGTAAGTAACGATTTTAATACAAGTTTGTCTGCCTAGAAATTAGAATGTTATAAAGAAAAAATGAAAGTTTTACACTTGGTTCATAGAAGGAAAATGAGTTTTAATCTA ATGAATTCCCTTAATCGCATTCAAATTCTCTCTTCAATGAACAACAATCGAATTCTTCAAATGTTTCGCCAAATCAAACAACCCCACTTCGGTTCTTCCTTCCATGGCAGATCCTTCTCCACCAGATCTTCTTCTTCTTCTTCCTCTTCCTCTTCCTCCGGAGCTGGCAAGTTTAGCAATGGTGACGATGAATGGAACGATACTTGGGAATCCGCTTGGCTTCCTGAAGACCTTTCACCAAAGAACAAAGCGCCATGGGAGAGTGATGTGAACTTTCCGTCTGGAAACCCTACGGTTGTATTTCCGTCGGACGTTGATGCAGATACCAAAGCGTTTGTTGAAGATATGAATGAGAATTGGGATGAGAGGCGAAAGGCATCTAAAACGCAGAAACAAGGAGTGAATCGGGAAGAGAAGGGAGGTGATGGCGGCGGTGGGTCGCTTTATAGCTTGGAGAACATAAAGAAGGATTATAGATTGCAGAAACAGAGGATTCATGCTAATTTGTGGATGAAGGAGATTGAGAAGCAAGAGGAGGCTAGGTTGGGGGATTCCATTGCTGGCAGTGGGGATGACATTGAAAGATTGATGGATAGCTGCTCTGAGATTTTTGAATCGGTCAATGATGATTTAAACCATTCAAAAGTTCCAAGTTCTTCGGAGTTCAGGAATAAACCTGATGGATGGGAAACATTATCCAAAGGTCATGATGATAATGTATGGGAGATGACACAAAGAGAAGAAGACATTCTCCTGCAGGAGTTTGATCGTCGTATCGCGTACAACAAATTTCAGATTGCTAGTTTCATCAAGACCCATATATTTAGTCGTCGGAGACCAATCGATGGATGGAAATACATGATAGAGGAATTTGGGCCAAATGCTAGGAAAGGAAAAGGTAGTGTTTCAAGGTTGCCTAATCTTTCTGATTCTTCAACCCAACCCTTCAAGGAGGAAAAAGTTGTAGCCTCCCCTTCTCTCAAACCCTTGAGGAGGATTTAA MNSLNRIQILSSMNNNRILQMFRQIKQPHFGSSFHGRSFSTRSSSSSSSSSSSGAGKFSNGDDEWNDTWESAWLPEDLSPKNKAPWESDVNFPSGNPTVVFPSDVDADTKAFVEDMNENWDERRKASKTQKQGVNREEKGGDGGGGSLYSLENIKKDYRLQKQRIHANLWMKEIEKQEEARLGDSIAGSGDDIERLMDSCSEIFESVNDDLNHSKVPSSSEFRNKPDGWETLSKGHDDNVWEMTQREEDILLQEFDRRIAYNKFQIASFIKTHIFSRRRPIDGWKYMIEEFGPNARKGKGSVSRLPNLSDSSTQPFKEEKVVASPSLKPLRRI Homology
BLAST of PI0003967 vs. ExPASy Swiss-Prot
Match: Q8S2G4 (Protein GAMETE CELL DEFECTIVE 1, mitochondrial OS=Oryza sativa subsp. japonica OX=39947 GN=GCD1 PE=2 SV=1) HSP 1 Score: 134.0 bits (336), Expect = 3.0e-30 Identity = 90/307 (29.32%), Postives = 156/307 (50.81%), Query Frame = 0
BLAST of PI0003967 vs. ExPASy Swiss-Prot
Match: A2WW22 (Protein GAMETE CELL DEFECTIVE 1, mitochondrial OS=Oryza sativa subsp. indica OX=39946 GN=GCD1 PE=3 SV=1) HSP 1 Score: 133.7 bits (335), Expect = 4.0e-30 Identity = 90/307 (29.32%), Postives = 156/307 (50.81%), Query Frame = 0
BLAST of PI0003967 vs. ExPASy Swiss-Prot
Match: Q9LVA9 (Protein GAMETE CELL DEFECTIVE 1, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=GCD1 PE=1 SV=1) HSP 1 Score: 108.2 bits (269), Expect = 1.8e-22 Identity = 97/346 (28.03%), Postives = 163/346 (47.11%), Query Frame = 0
BLAST of PI0003967 vs. ExPASy TrEMBL
Match: A0A0A0LZT4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G600820 PE=4 SV=1) HSP 1 Score: 609.0 bits (1569), Expect = 1.2e-170 Identity = 316/335 (94.33%), Postives = 323/335 (96.42%), Query Frame = 0
BLAST of PI0003967 vs. ExPASy TrEMBL
Match: A0A5D3CEI1 (Mucin-related protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold16G00620 PE=4 SV=1) HSP 1 Score: 596.3 bits (1536), Expect = 8.0e-167 Identity = 306/336 (91.07%), Postives = 321/336 (95.54%), Query Frame = 0
BLAST of PI0003967 vs. ExPASy TrEMBL
Match: A0A1S3BQ21 (uncharacterized protein LOC103492453 OS=Cucumis melo OX=3656 GN=LOC103492453 PE=4 SV=1) HSP 1 Score: 596.3 bits (1536), Expect = 8.0e-167 Identity = 306/336 (91.07%), Postives = 321/336 (95.54%), Query Frame = 0
BLAST of PI0003967 vs. ExPASy TrEMBL
Match: A0A6J1HBR0 (uncharacterized protein LOC111461829 OS=Cucurbita moschata OX=3662 GN=LOC111461829 PE=4 SV=1) HSP 1 Score: 562.0 bits (1447), Expect = 1.7e-156 Identity = 285/333 (85.59%), Postives = 305/333 (91.59%), Query Frame = 0
BLAST of PI0003967 vs. ExPASy TrEMBL
Match: A0A6J1JCB8 (uncharacterized protein LOC111485489 OS=Cucurbita maxima OX=3661 GN=LOC111485489 PE=4 SV=1) HSP 1 Score: 560.8 bits (1444), Expect = 3.7e-156 Identity = 287/337 (85.16%), Postives = 304/337 (90.21%), Query Frame = 0
BLAST of PI0003967 vs. NCBI nr
Match: XP_004144093.1 (uncharacterized protein LOC101222958 [Cucumis sativus] >KGN66392.1 hypothetical protein Csa_006903 [Cucumis sativus]) HSP 1 Score: 609.0 bits (1569), Expect = 2.5e-170 Identity = 316/335 (94.33%), Postives = 323/335 (96.42%), Query Frame = 0
BLAST of PI0003967 vs. NCBI nr
Match: XP_008451050.1 (PREDICTED: uncharacterized protein LOC103492453 [Cucumis melo] >KAA0055686.1 Mucin-related protein [Cucumis melo var. makuwa] >TYK09935.1 Mucin-related protein [Cucumis melo var. makuwa]) HSP 1 Score: 596.3 bits (1536), Expect = 1.7e-166 Identity = 306/336 (91.07%), Postives = 321/336 (95.54%), Query Frame = 0
BLAST of PI0003967 vs. NCBI nr
Match: XP_038878422.1 (protein GAMETE CELL DEFECTIVE 1, mitochondrial [Benincasa hispida]) HSP 1 Score: 582.0 bits (1499), Expect = 3.2e-162 Identity = 297/336 (88.39%), Postives = 315/336 (93.75%), Query Frame = 0
BLAST of PI0003967 vs. NCBI nr
Match: XP_022961285.1 (uncharacterized protein LOC111461829 [Cucurbita moschata]) HSP 1 Score: 562.0 bits (1447), Expect = 3.4e-156 Identity = 285/333 (85.59%), Postives = 305/333 (91.59%), Query Frame = 0
BLAST of PI0003967 vs. NCBI nr
Match: XP_022988172.1 (uncharacterized protein LOC111485489 [Cucurbita maxima]) HSP 1 Score: 560.8 bits (1444), Expect = 7.7e-156 Identity = 287/337 (85.16%), Postives = 304/337 (90.21%), Query Frame = 0
BLAST of PI0003967 vs. TAIR 10
Match: AT2G02880.1 (mucin-related ) HSP 1 Score: 349.0 bits (894), Expect = 4.3e-96 Identity = 182/280 (65.00%), Postives = 217/280 (77.50%), Query Frame = 0
BLAST of PI0003967 vs. TAIR 10
Match: AT5G62270.1 (BEST Arabidopsis thaliana protein match is: mucin-related (TAIR:AT2G02880.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). ) HSP 1 Score: 108.2 bits (269), Expect = 1.3e-23 Identity = 97/346 (28.03%), Postives = 163/346 (47.11%), Query Frame = 0
BLAST of PI0003967 vs. TAIR 10
Match: AT5G62270.2 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: mucin-related (TAIR:AT2G02880.1). ) HSP 1 Score: 108.2 bits (269), Expect = 1.3e-23 Identity = 97/346 (28.03%), Postives = 163/346 (47.11%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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