PI0003747 (gene) Melon (PI 482460) v1

Overview


Name	PI0003747
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	transcription factor AS1
Location	chr08: 22259439 .. 22261323 (-)
RNA-Seq Expression	PI0003747
Synteny	PI0003747

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CCTCTGTGCAGCAGTTTCTGATTCTCAGCTGTTTCGCTCTGTCTCAATCGTCCCTTCTGGCTTTATACATATATATGTAACAGTGACTAAACGAAAGCCTAATGCTGCCTGCTGTGGCCTCTGCCCCTTGCCCCCAGTGGAACACCCACTCTTTCCTCTTTCTATCTCTCTTTCTCTCTCTCTCTCTCTCTCTCTCTTCATTATATTTACCTCTTTAGCCTTTTCAAATTCCATCCTTCCCTTCCTCCTTCCATTCTCTCTCCTTTTCTAGCTTCTTAAACGAATTGGGTTTCCTTTTCTCTCCTTGTTTCTACTCATTTTGATTCTCTTTTGGCTGTGGATGCTCGTACTTAACACTCCCAGTGTATTTCCTCTTCTCTCTTTTCCCTTTTTTCTACTTTTTATTGTGTTCTCAAGGACTGAAATTGTTCTGATGGTTTGGTTGTAGTCCTTTTTCAAGAATGGAAGTTCTGGGTTGCTGTTTTTGTTTAATTCTGTTGAATTTTGCTGATTTTTCTTGGATGGGGGACAGTTTTTGGGTAGAATTCAAATGGGTTTCGTTTGAATTTTGGTATTTGTATACATACTGTTTGGTTATGTCTGGTTTGGTTTGTTGTTTAGTTGAGGTTGAATTTATCTTTCTGTTCTCTTCATGGCACAGTGAGGGAACTTCTTTTGTGAAATGCGTGAACTGTGAAGTAAATTTTGGCCAAGTTTTTGTTATGGATTGCTGTGTTTAGTCAGTCTTTTCCCTGAATTTTATTTACATTTTGTTCACTTCTTATGATCAGTCCTTTTATCTTACATATTGAAATCATTTTTTAGATACTATAAAGAAGAAGGCTCTGGGAAGCTAATAAATGAAGCACGTATGAATTATTGGTTTGTCCTTGAAGGCTTGAATTTAGCAGTGAGTGGATGGAACAATGCTTAGAAATTGTGGAAGAATATAGTAGTAGAGAAAAGAAATTTTACTTTGAACTTACTTGTAAGGCTATACAATAAATAATAATAACAATAAAAAACTTAAACTTACTTCATGGCCACTTCCAATGGGGGATTTCTTCAAACTGATTCATCCACTCCACCACCATCTCTTCCTCCTTGGCTTTCCAACTCCAACGGTGGCTCATCGCTCCGACCGCCTTCCCCATCGGTCACCTTAACATTATCTTCCCCCACAGTTCCAGCCTACACTCCCATCCCCTGGTTGCAACAGCCAGACAGAATGCCAGAAAACATGCCTCTTGTATTAGGCAATTTAGCACCTCAAATGTCAATGCCATCATGTGGTGGTAGCCTCTTTGCTTCTGAGCTCGTCGAGTGCTGCCGAGAGCTTGATGAAGGCCACCGTGCTTGGGCAGCACACAAGAAGGAAACAGCATGGAGGTTAAGAAGACAAGAGTTGCAATTGGAGTCGGAGAAGGCGTCTCGGATTCGACAGAAGATGGAAGAGGTTGAAGGGAAAGTAAAAGCTCTTAGAGAAGAAGAGAAGATTGCTTTGGAAAGGATTGAAGCTGAGTATAAGGAGCAATTGGCAGGGTTTAGGAAAGATGCTGAGGCTAAAGAACAAAAGCTGGCTGAGCAATGGGCTGCTAAACATATGAGCCTTACTAAGTTTCTTGAGCATATGGGATGCAGGACTAGAATTGCTGAGTCAAGTGGGAGGTGAGAAAACCAATTGCCACAGTTTCAAGTTTTGTGATTGCCTCTATGAATTTCTTCATGGGAATTTCTTTCCTTTTCAATCTCTCTTTTTTAATATTTTTACTTCCATTTTGTATCTATTGACATCTGAAATTATGCATCAATGTCATCCTATATTTGCTTTGTAATTGATACTCTTACAAGCAAAATGTCAAGTATTTATTTTGATTCTGCTAAA

mRNA sequence

CCTCTGTGCAGCAGTTTCTGATTCTCAGCTGTTTCGCTCTGTCTCAATCGTCCCTTCTGGCTTTATACATATATATGTAACAGTGACTAAACGAAAGCCTAATGCTGCCTGCTGTGGCCTCTGCCCCTTGCCCCCAGTGGAACACCCACTCTTTCCTCTTTCTATCTCTCTTTCTCTCTCTCTCTCTCTCTCTCTCTTCATTATATTTACCTCTTTAGCCTTTTCAAATTCCATCCTTCCCTTCCTCCTTCCATTCTCTCTCCTTTTCTAGCTTCTTAAACGAATTGGGTTTCCTTTTCTCTCCTTGTTTCTACTCATTTTGATTCTCTTTTGGCTGTGGATGCTCGTACTTAACACTCCCAGTATACTATAAAGAAGAAGGCTCTGGGAAGCTAATAAATGAAGCACGTATGAATTATTGGTTTGTCCTTGAAGGCTTGAATTTAGCAGTGAGTGGATGGAACAATGCTTAGAAATTGTGGAAGAATATAGTAGTAGAGAAAAGAAATTTTACTTTGAACTTACTTGTAAGGCTATACAATAAATAATAATAACAATAAAAAACTTAAACTTACTTCATGGCCACTTCCAATGGGGGATTTCTTCAAACTGATTCATCCACTCCACCACCATCTCTTCCTCCTTGGCTTTCCAACTCCAACGGTGGCTCATCGCTCCGACCGCCTTCCCCATCGGTCACCTTAACATTATCTTCCCCCACAGTTCCAGCCTACACTCCCATCCCCTGGTTGCAACAGCCAGACAGAATGCCAGAAAACATGCCTCTTGTATTAGGCAATTTAGCACCTCAAATGTCAATGCCATCATGTGGTGGTAGCCTCTTTGCTTCTGAGCTCGTCGAGTGCTGCCGAGAGCTTGATGAAGGCCACCGTGCTTGGGCAGCACACAAGAAGGAAACAGCATGGAGGTTAAGAAGACAAGAGTTGCAATTGGAGTCGGAGAAGGCGTCTCGGATTCGACAGAAGATGGAAGAGGTTGAAGGGAAAGTAAAAGCTCTTAGAGAAGAAGAGAAGATTGCTTTGGAAAGGATTGAAGCTGAGTATAAGGAGCAATTGGCAGGGTTTAGGAAAGATGCTGAGGCTAAAGAACAAAAGCTGGCTGAGCAATGGGCTGCTAAACATATGAGCCTTACTAAGTTTCTTGAGCATATGGGATGCAGGACTAGAATTGCTGAGTCAAGTGGGAGGTGAGAAAACCAATTGCCACAGTTTCAAGTTTTGTGATTGCCTCTATGAATTTCTTCATGGGAATTTCTTTCCTTTTCAATCTCTCTTTTTTAATATTTTTACTTCCATTTTGTATCTATTGACATCTGAAATTATGCATCAATGTCATCCTATATTTGCTTTGTAATTGATACTCTTACAAGCAAAATGTCAAGTATTTATTTTGATTCTGCTAAA

Coding sequence (CDS)

ATGGCCACTTCCAATGGGGGATTTCTTCAAACTGATTCATCCACTCCACCACCATCTCTTCCTCCTTGGCTTTCCAACTCCAACGGTGGCTCATCGCTCCGACCGCCTTCCCCATCGGTCACCTTAACATTATCTTCCCCCACAGTTCCAGCCTACACTCCCATCCCCTGGTTGCAACAGCCAGACAGAATGCCAGAAAACATGCCTCTTGTATTAGGCAATTTAGCACCTCAAATGTCAATGCCATCATGTGGTGGTAGCCTCTTTGCTTCTGAGCTCGTCGAGTGCTGCCGAGAGCTTGATGAAGGCCACCGTGCTTGGGCAGCACACAAGAAGGAAACAGCATGGAGGTTAAGAAGACAAGAGTTGCAATTGGAGTCGGAGAAGGCGTCTCGGATTCGACAGAAGATGGAAGAGGTTGAAGGGAAAGTAAAAGCTCTTAGAGAAGAAGAGAAGATTGCTTTGGAAAGGATTGAAGCTGAGTATAAGGAGCAATTGGCAGGGTTTAGGAAAGATGCTGAGGCTAAAGAACAAAAGCTGGCTGAGCAATGGGCTGCTAAACATATGAGCCTTACTAAGTTTCTTGAGCATATGGGATGCAGGACTAGAATTGCTGAGTCAAGTGGGAGGTGA

Protein sequence

MATSNGGFLQTDSSTPPPSLPPWLSNSNGGSSLRPPSPSVTLTLSSPTVPAYTPIPWLQQPDRMPENMPLVLGNLAPQMSMPSCGGSLFASELVECCRELDEGHRAWAAHKKETAWRLRRQELQLESEKASRIRQKMEEVEGKVKALREEEKIALERIEAEYKEQLAGFRKDAEAKEQKLAEQWAAKHMSLTKFLEHMGCRTRIAESSGR

Homology

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BLAST of PI0003747 vs. ExPASy Swiss-Prot
Match: O80931 (Transcription factor AS1 OS=Arabidopsis thaliana OX=3702 GN=AS1 PE=1 SV=1)

HSP 1 Score: 224.9 bits (572), Expect = 8.3e-58
Identity = 134/214 (62.62%), Postives = 160/214 (74.77%), Query Frame = 0


Query: 1   MATSNGGFLQTDSSTPPPS--LPPWLSNSNGGSSLRPPSPSVTLTLSSPTVPA---YTPI 60
           MA SNGGFL ++    PP+  +PPWL+ SN G+++    PSVTLTLS  TV A     PI
Sbjct: 156 MANSNGGFLHSEQQVQPPNPVIPPWLATSNNGNNVVARPPSVTLTLSPSTVAAAAPQPPI 215

Query: 61  PWL--QQPDRMPENMP--LVLGNLAPQMSMPSCGG---SLFASELVECCRELDEGHRAWA 120
           PWL  QQP+R  EN P  LVLG++     MPSC G   S+F SELVECCREL+EGHRAWA
Sbjct: 216 PWLQQQQPER-AENGPGGLVLGSM-----MPSCSGSSESVFLSELVECCRELEEGHRAWA 275

Query: 121 AHKKETAWRLRRQELQLESEKASRIRQKMEEVEGKVKALREEEKIALERIEAEYKEQLAG 180
            HKKE AWRLRR ELQLESEK  R R+KMEE+E K+KALREE+K A+E+IE EY+EQL G
Sbjct: 276 DHKKEAAWRLRRLELQLESEKTCRQREKMEEIEAKMKALREEQKNAMEKIEGEYREQLVG 335

Query: 181 FRKDAEAKEQKLAEQWAAKHMSLTKFLE-HMGCR 202
            R+DAEAK+QKLA+QW ++H+ LTKFLE  MGCR
Sbjct: 336 LRRDAEAKDQKLADQWTSRHIRLTKFLEQQMGCR 363

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BLAST of PI0003747 vs. ExPASy Swiss-Prot
Match: Q94IB1 (Protein rough sheath 2 homolog OS=Oryza sativa subsp. japonica OX=39947 GN=RS2 PE=2 SV=1)

HSP 1 Score: 159.1 bits (401), Expect = 5.6e-38
Identity = 95/188 (50.53%), Postives = 123/188 (65.43%), Query Frame = 0


Query: 18  PSLPPWLSNSNGGSSLRPPSPSVTLTLSSPTV---PAYTPIPWLQQPDRMPENMPLVLGN 77
           P LPPW+S+S   SS    SPSVTL+L+S  V   PA  P  W                 
Sbjct: 163 PILPPWMSSSPSSSS----SPSVTLSLASAAVAPAPAAPPPTW----------------- 222

Query: 78  LAPQMSMPSCGGSLFASELVECCRELDEGHRAWAAHKKETAWRLRRQELQLESEKASRIR 137
                     GG +  +EL+ECCRE++EG RAWAAH+KE AWR++R E+QLE+E+A R R
Sbjct: 223 ------GGGGGGEVVVAELMECCREMEEGQRAWAAHRKEAAWRMKRVEMQLETERACRRR 282

Query: 138 QKMEEVEGKVKALREEEKIALERIEAEYKEQLAGFRKDAEAKEQKLAEQWAAKHMSLTKF 197
           +  EE E K++ALREE+  A+ER+EAEY+E++AG R+DAEAKEQK+AEQWAAKH  L KF
Sbjct: 283 EATEEFEAKMRALREEQAAAVERVEAEYREKMAGLRRDAEAKEQKMAEQWAAKHARLAKF 323

Query: 198 LEHM-GCR 202
           L+ +  CR
Sbjct: 343 LDQVAACR 323

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BLAST of PI0003747 vs. ExPASy Swiss-Prot
Match: Q9S7B2 (Protein rough sheath 2 OS=Zea mays OX=4577 GN=RS2 PE=1 SV=1)

HSP 1 Score: 146.0 bits (367), Expect = 4.9e-34
Identity = 91/199 (45.73%), Postives = 122/199 (61.31%), Query Frame = 0


Query: 18  PSLPPWLSNSNGGSSL----------RPPSPSVTLTLSSPTVPAYTPIPWLQQPDRMPEN 77
           P LPPWLS++ G ++           RPPSPSVTL+L+S  V    P P    PDR   +
Sbjct: 160 PVLPPWLSSNAGPAAAAAAAVAHPPPRPPSPSVTLSLASAAVAPGPPAPAPWMPDRAAAD 219

Query: 78  -------MPLVLGNLAPQMSMPSCGGSLFASELVECCRELDEGHRAWAAHKKETAWRLRR 137
                   P   G  AP       G +L  +EL ECCREL+EG RAWAAH++E AWRL+R
Sbjct: 220 AAPYGFPSPSQHGGAAPPGMAVVDGQAL--AELAECCRELEEGRRAWAAHRREAAWRLKR 279

Query: 138 QELQLESEKASRIRQKMEEVEGKVKALREEEKIALERIEAEYKEQLAGFRKDAEAKEQKL 197
            E QLE E+  R R+  EE E K++ +R E+  A ER+E +++E++A  R+DA+ KE+K+
Sbjct: 280 VEQQLEMEREMRRREVWEEFEAKMRTMRLEQAAAAERVERDHREKVAELRRDAQVKEEKM 339

Query: 198 AEQWAAKHMSLTKFLEHMG 200
           AEQWAAKH  + KF+E MG
Sbjct: 340 AEQWAAKHARVAKFVEQMG 356

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BLAST of PI0003747 vs. ExPASy TrEMBL
Match: A0A5D3DN74 (Transcription factor AS1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G001650 PE=4 SV=1)

HSP 1 Score: 405.2 bits (1040), Expect = 1.6e-109
Identity = 209/210 (99.52%), Postives = 210/210 (100.00%), Query Frame = 0


Query: 1   MATSNGGFLQTDSSTPPPSLPPWLSNSNGGSSLRPPSPSVTLTLSSPTVPAYTPIPWLQQ 60
           MATSNGGFLQTDSSTPPPSLPPWLSNSNGGSSLRPPSPSVTLTLSSPTVPAYTPIPWLQQ
Sbjct: 1   MATSNGGFLQTDSSTPPPSLPPWLSNSNGGSSLRPPSPSVTLTLSSPTVPAYTPIPWLQQ 60

Query: 61  PDRMPENMPLVLGNLAPQMSMPSCGGSLFASELVECCRELDEGHRAWAAHKKETAWRLRR 120
           PDRMPEN+PLVLGNLAPQMSMPSCGGSLFASELVECCRELDEGHRAWAAHKKETAWRLRR
Sbjct: 61  PDRMPENIPLVLGNLAPQMSMPSCGGSLFASELVECCRELDEGHRAWAAHKKETAWRLRR 120

Query: 121 QELQLESEKASRIRQKMEEVEGKVKALREEEKIALERIEAEYKEQLAGFRKDAEAKEQKL 180
           QELQLESEKASRIRQKMEEVEGKVKALREEEKIALERIEAEYKEQLAGFRKDAEAKEQKL
Sbjct: 121 QELQLESEKASRIRQKMEEVEGKVKALREEEKIALERIEAEYKEQLAGFRKDAEAKEQKL 180

Query: 181 AEQWAAKHMSLTKFLEHMGCRTRIAESSGR 211
           AEQWAAKHMSLTKFLEHMGCRTRIAESSGR
Sbjct: 181 AEQWAAKHMSLTKFLEHMGCRTRIAESSGR 210

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BLAST of PI0003747 vs. ExPASy TrEMBL
Match: A0A1S3B5G1 (transcription factor AS1 OS=Cucumis melo OX=3656 GN=LOC103486384 PE=4 SV=1)

HSP 1 Score: 405.2 bits (1040), Expect = 1.6e-109
Identity = 209/210 (99.52%), Postives = 210/210 (100.00%), Query Frame = 0


Query: 1   MATSNGGFLQTDSSTPPPSLPPWLSNSNGGSSLRPPSPSVTLTLSSPTVPAYTPIPWLQQ 60
           MATSNGGFLQTDSSTPPPSLPPWLSNSNGGSSLRPPSPSVTLTLSSPTVPAYTPIPWLQQ
Sbjct: 1   MATSNGGFLQTDSSTPPPSLPPWLSNSNGGSSLRPPSPSVTLTLSSPTVPAYTPIPWLQQ 60

Query: 61  PDRMPENMPLVLGNLAPQMSMPSCGGSLFASELVECCRELDEGHRAWAAHKKETAWRLRR 120
           PDRMPEN+PLVLGNLAPQMSMPSCGGSLFASELVECCRELDEGHRAWAAHKKETAWRLRR
Sbjct: 61  PDRMPENIPLVLGNLAPQMSMPSCGGSLFASELVECCRELDEGHRAWAAHKKETAWRLRR 120

Query: 121 QELQLESEKASRIRQKMEEVEGKVKALREEEKIALERIEAEYKEQLAGFRKDAEAKEQKL 180
           QELQLESEKASRIRQKMEEVEGKVKALREEEKIALERIEAEYKEQLAGFRKDAEAKEQKL
Sbjct: 121 QELQLESEKASRIRQKMEEVEGKVKALREEEKIALERIEAEYKEQLAGFRKDAEAKEQKL 180

Query: 181 AEQWAAKHMSLTKFLEHMGCRTRIAESSGR 211
           AEQWAAKHMSLTKFLEHMGCRTRIAESSGR
Sbjct: 181 AEQWAAKHMSLTKFLEHMGCRTRIAESSGR 210

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BLAST of PI0003747 vs. ExPASy TrEMBL
Match: A0A0A0LAJ9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G734210 PE=4 SV=1)

HSP 1 Score: 401.0 bits (1029), Expect = 3.1e-108
Identity = 208/210 (99.05%), Postives = 208/210 (99.05%), Query Frame = 0


Query: 1   MATSNGGFLQTDSSTPPPSLPPWLSNSNGGSSLRPPSPSVTLTLSSPTVPAYTPIPWLQQ 60
           MATSNGGFLQTDSST PPSLPPWLSNSNGGSSLRPPSPSVTLTLSSPTVPAYTPIPWLQQ
Sbjct: 1   MATSNGGFLQTDSSTSPPSLPPWLSNSNGGSSLRPPSPSVTLTLSSPTVPAYTPIPWLQQ 60

Query: 61  PDRMPENMPLVLGNLAPQMSMPSCGGSLFASELVECCRELDEGHRAWAAHKKETAWRLRR 120
           PDRMPENMPLVLGNLAPQMSMPSCGGSLFASELVECCRELDEGHRAWAAHKKETAWRLRR
Sbjct: 61  PDRMPENMPLVLGNLAPQMSMPSCGGSLFASELVECCRELDEGHRAWAAHKKETAWRLRR 120

Query: 121 QELQLESEKASRIRQKMEEVEGKVKALREEEKIALERIEAEYKEQLAGFRKDAEAKEQKL 180
           QELQLESEKASRIR KMEEVEGKVKALREEEKIALERIEAEYKEQLAGFRKDAEAKEQKL
Sbjct: 121 QELQLESEKASRIRLKMEEVEGKVKALREEEKIALERIEAEYKEQLAGFRKDAEAKEQKL 180

Query: 181 AEQWAAKHMSLTKFLEHMGCRTRIAESSGR 211
           AEQWAAKHMSLTKFLEHMGCRTRIAESSGR
Sbjct: 181 AEQWAAKHMSLTKFLEHMGCRTRIAESSGR 210

[Close]

BLAST of PI0003747 vs. ExPASy TrEMBL
Match: A0A6J1J530 (transcription factor AS1-like OS=Cucurbita maxima OX=3661 GN=LOC111481437 PE=4 SV=1)

HSP 1 Score: 385.2 bits (988), Expect = 1.8e-103
Identity = 198/210 (94.29%), Postives = 204/210 (97.14%), Query Frame = 0


Query: 1   MATSNGGFLQTDSSTPPPSLPPWLSNSNGGSSLRPPSPSVTLTLSSPTVPAYTPIPWLQQ 60
           MATSNGGFLQTDSSTPPPSLPPWLSNSNGGS LRPPSPSVTLTLSSPTVPAY+PIPWLQQ
Sbjct: 1   MATSNGGFLQTDSSTPPPSLPPWLSNSNGGSLLRPPSPSVTLTLSSPTVPAYSPIPWLQQ 60

Query: 61  PDRMPENMPLVLGNLAPQMSMPSCGGSLFASELVECCRELDEGHRAWAAHKKETAWRLRR 120
           P+R+PENMPLVLGNLAP MSM SCGGSLFASELVECCRELDEGHRAWAAHKKETAWRLRR
Sbjct: 61  PERIPENMPLVLGNLAPHMSMASCGGSLFASELVECCRELDEGHRAWAAHKKETAWRLRR 120

Query: 121 QELQLESEKASRIRQKMEEVEGKVKALREEEKIALERIEAEYKEQLAGFRKDAEAKEQKL 180
           QELQLESEKASRIRQKMEEVEGKVKALREEEK  LERIEAEYKEQLAG RKDAEAKEQKL
Sbjct: 121 QELQLESEKASRIRQKMEEVEGKVKALREEEKSGLERIEAEYKEQLAGLRKDAEAKEQKL 180

Query: 181 AEQWAAKHMSLTKFLEHMGCRTRIAESSGR 211
           A+QWAAKH+SLTKFLEHMGCRTRIA+SSGR
Sbjct: 181 ADQWAAKHLSLTKFLEHMGCRTRIADSSGR 210

[Close]

BLAST of PI0003747 vs. ExPASy TrEMBL
Match: A0A6J1I2B9 (transcription factor AS1-like OS=Cucurbita maxima OX=3661 GN=LOC111470250 PE=4 SV=1)

HSP 1 Score: 385.2 bits (988), Expect = 1.8e-103
Identity = 196/210 (93.33%), Postives = 206/210 (98.10%), Query Frame = 0


Query: 1   MATSNGGFLQTDSSTPPPSLPPWLSNSNGGSSLRPPSPSVTLTLSSPTVPAYTPIPWLQQ 60
           MATSNGGFLQTDSSTPPPSLPPWLSNSN  SSLRPPSPSVTLTLSSPTVPAY+PIPWLQQ
Sbjct: 1   MATSNGGFLQTDSSTPPPSLPPWLSNSNSSSSLRPPSPSVTLTLSSPTVPAYSPIPWLQQ 60

Query: 61  PDRMPENMPLVLGNLAPQMSMPSCGGSLFASELVECCRELDEGHRAWAAHKKETAWRLRR 120
           P+R+PE MPLVLGN+APQM+MPSCGGSLFASELVECCRELDEGHRAWA+HKKETAWRLRR
Sbjct: 61  PERIPETMPLVLGNIAPQMTMPSCGGSLFASELVECCRELDEGHRAWASHKKETAWRLRR 120

Query: 121 QELQLESEKASRIRQKMEEVEGKVKALREEEKIALERIEAEYKEQLAGFRKDAEAKEQKL 180
           QELQLESEKASRIRQKMEEVEGKVKA+REEEKIALERIEAEYKEQLAG RKDAEAKEQKL
Sbjct: 121 QELQLESEKASRIRQKMEEVEGKVKAVREEEKIALERIEAEYKEQLAGLRKDAEAKEQKL 180

Query: 181 AEQWAAKHMSLTKFLEHMGCRTRIAESSGR 211
           AEQWAAKH+SLTKFLEHMGCRT+I+ESSGR
Sbjct: 181 AEQWAAKHLSLTKFLEHMGCRTKISESSGR 210

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BLAST of PI0003747 vs. NCBI nr
Match: XP_008442545.1 (PREDICTED: transcription factor AS1 [Cucumis melo] >KAA0044093.1 transcription factor AS1 [Cucumis melo var. makuwa] >TYK25044.1 transcription factor AS1 [Cucumis melo var. makuwa])

HSP 1 Score: 405.2 bits (1040), Expect = 3.4e-109
Identity = 209/210 (99.52%), Postives = 210/210 (100.00%), Query Frame = 0


Query: 1   MATSNGGFLQTDSSTPPPSLPPWLSNSNGGSSLRPPSPSVTLTLSSPTVPAYTPIPWLQQ 60
           MATSNGGFLQTDSSTPPPSLPPWLSNSNGGSSLRPPSPSVTLTLSSPTVPAYTPIPWLQQ
Sbjct: 1   MATSNGGFLQTDSSTPPPSLPPWLSNSNGGSSLRPPSPSVTLTLSSPTVPAYTPIPWLQQ 60

Query: 61  PDRMPENMPLVLGNLAPQMSMPSCGGSLFASELVECCRELDEGHRAWAAHKKETAWRLRR 120
           PDRMPEN+PLVLGNLAPQMSMPSCGGSLFASELVECCRELDEGHRAWAAHKKETAWRLRR
Sbjct: 61  PDRMPENIPLVLGNLAPQMSMPSCGGSLFASELVECCRELDEGHRAWAAHKKETAWRLRR 120

Query: 121 QELQLESEKASRIRQKMEEVEGKVKALREEEKIALERIEAEYKEQLAGFRKDAEAKEQKL 180
           QELQLESEKASRIRQKMEEVEGKVKALREEEKIALERIEAEYKEQLAGFRKDAEAKEQKL
Sbjct: 121 QELQLESEKASRIRQKMEEVEGKVKALREEEKIALERIEAEYKEQLAGFRKDAEAKEQKL 180

Query: 181 AEQWAAKHMSLTKFLEHMGCRTRIAESSGR 211
           AEQWAAKHMSLTKFLEHMGCRTRIAESSGR
Sbjct: 181 AEQWAAKHMSLTKFLEHMGCRTRIAESSGR 210

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BLAST of PI0003747 vs. NCBI nr
Match: XP_004137788.1 (transcription factor AS1 [Cucumis sativus] >KGN58868.1 hypothetical protein Csa_001688 [Cucumis sativus])

HSP 1 Score: 401.0 bits (1029), Expect = 6.4e-108
Identity = 208/210 (99.05%), Postives = 208/210 (99.05%), Query Frame = 0


Query: 1   MATSNGGFLQTDSSTPPPSLPPWLSNSNGGSSLRPPSPSVTLTLSSPTVPAYTPIPWLQQ 60
           MATSNGGFLQTDSST PPSLPPWLSNSNGGSSLRPPSPSVTLTLSSPTVPAYTPIPWLQQ
Sbjct: 1   MATSNGGFLQTDSSTSPPSLPPWLSNSNGGSSLRPPSPSVTLTLSSPTVPAYTPIPWLQQ 60

Query: 61  PDRMPENMPLVLGNLAPQMSMPSCGGSLFASELVECCRELDEGHRAWAAHKKETAWRLRR 120
           PDRMPENMPLVLGNLAPQMSMPSCGGSLFASELVECCRELDEGHRAWAAHKKETAWRLRR
Sbjct: 61  PDRMPENMPLVLGNLAPQMSMPSCGGSLFASELVECCRELDEGHRAWAAHKKETAWRLRR 120

Query: 121 QELQLESEKASRIRQKMEEVEGKVKALREEEKIALERIEAEYKEQLAGFRKDAEAKEQKL 180
           QELQLESEKASRIR KMEEVEGKVKALREEEKIALERIEAEYKEQLAGFRKDAEAKEQKL
Sbjct: 121 QELQLESEKASRIRLKMEEVEGKVKALREEEKIALERIEAEYKEQLAGFRKDAEAKEQKL 180

Query: 181 AEQWAAKHMSLTKFLEHMGCRTRIAESSGR 211
           AEQWAAKHMSLTKFLEHMGCRTRIAESSGR
Sbjct: 181 AEQWAAKHMSLTKFLEHMGCRTRIAESSGR 210

[Close]

BLAST of PI0003747 vs. NCBI nr
Match: XP_038903104.1 (transcription factor AS1-like [Benincasa hispida] >XP_038903105.1 transcription factor AS1-like [Benincasa hispida])

HSP 1 Score: 396.7 bits (1018), Expect = 1.2e-106
Identity = 204/210 (97.14%), Postives = 209/210 (99.52%), Query Frame = 0


Query: 1   MATSNGGFLQTDSSTPPPSLPPWLSNSNGGSSLRPPSPSVTLTLSSPTVPAYTPIPWLQQ 60
           MATSNGGFLQTDSSTPPPSLPPWLSNSNGGSSLRPPSPSVTLTLSSPTVPAY+PIPWLQQ
Sbjct: 1   MATSNGGFLQTDSSTPPPSLPPWLSNSNGGSSLRPPSPSVTLTLSSPTVPAYSPIPWLQQ 60

Query: 61  PDRMPENMPLVLGNLAPQMSMPSCGGSLFASELVECCRELDEGHRAWAAHKKETAWRLRR 120
           P+R+PENMPLVLGNLAPQMSMPSCGGSLFASELVECCREL+EGHRAWAAHKKETAWRLRR
Sbjct: 61  PERIPENMPLVLGNLAPQMSMPSCGGSLFASELVECCRELNEGHRAWAAHKKETAWRLRR 120

Query: 121 QELQLESEKASRIRQKMEEVEGKVKALREEEKIALERIEAEYKEQLAGFRKDAEAKEQKL 180
           QELQLESEKASRIRQKMEEVEGKVKALREEEKIALERIEAEYKEQLAG RKDAEAKEQKL
Sbjct: 121 QELQLESEKASRIRQKMEEVEGKVKALREEEKIALERIEAEYKEQLAGLRKDAEAKEQKL 180

Query: 181 AEQWAAKHMSLTKFLEHMGCRTRIAESSGR 211
           AEQWAAKH+SLTKFLEHMGCRTRIAESSGR
Sbjct: 181 AEQWAAKHLSLTKFLEHMGCRTRIAESSGR 210

[Close]

BLAST of PI0003747 vs. NCBI nr
Match: XP_022982614.1 (transcription factor AS1-like [Cucurbita maxima] >XP_022982615.1 transcription factor AS1-like [Cucurbita maxima])

HSP 1 Score: 385.2 bits (988), Expect = 3.6e-103
Identity = 198/210 (94.29%), Postives = 204/210 (97.14%), Query Frame = 0


Query: 1   MATSNGGFLQTDSSTPPPSLPPWLSNSNGGSSLRPPSPSVTLTLSSPTVPAYTPIPWLQQ 60
           MATSNGGFLQTDSSTPPPSLPPWLSNSNGGS LRPPSPSVTLTLSSPTVPAY+PIPWLQQ
Sbjct: 1   MATSNGGFLQTDSSTPPPSLPPWLSNSNGGSLLRPPSPSVTLTLSSPTVPAYSPIPWLQQ 60

Query: 61  PDRMPENMPLVLGNLAPQMSMPSCGGSLFASELVECCRELDEGHRAWAAHKKETAWRLRR 120
           P+R+PENMPLVLGNLAP MSM SCGGSLFASELVECCRELDEGHRAWAAHKKETAWRLRR
Sbjct: 61  PERIPENMPLVLGNLAPHMSMASCGGSLFASELVECCRELDEGHRAWAAHKKETAWRLRR 120

Query: 121 QELQLESEKASRIRQKMEEVEGKVKALREEEKIALERIEAEYKEQLAGFRKDAEAKEQKL 180
           QELQLESEKASRIRQKMEEVEGKVKALREEEK  LERIEAEYKEQLAG RKDAEAKEQKL
Sbjct: 121 QELQLESEKASRIRQKMEEVEGKVKALREEEKSGLERIEAEYKEQLAGLRKDAEAKEQKL 180

Query: 181 AEQWAAKHMSLTKFLEHMGCRTRIAESSGR 211
           A+QWAAKH+SLTKFLEHMGCRTRIA+SSGR
Sbjct: 181 ADQWAAKHLSLTKFLEHMGCRTRIADSSGR 210

[Close]

BLAST of PI0003747 vs. NCBI nr
Match: KAG6596407.1 (E3 ubiquitin-protein ligase PRT6, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 385.2 bits (988), Expect = 3.6e-103
Identity = 196/210 (93.33%), Postives = 206/210 (98.10%), Query Frame = 0


Query: 1   MATSNGGFLQTDSSTPPPSLPPWLSNSNGGSSLRPPSPSVTLTLSSPTVPAYTPIPWLQQ 60
           MATSNGGFLQTDSSTPPPSLPPWLSNSN  SSLRPPSPSVTLTLSSPTVPAY+PIPWLQQ
Sbjct: 1   MATSNGGFLQTDSSTPPPSLPPWLSNSNSSSSLRPPSPSVTLTLSSPTVPAYSPIPWLQQ 60

Query: 61  PDRMPENMPLVLGNLAPQMSMPSCGGSLFASELVECCRELDEGHRAWAAHKKETAWRLRR 120
           P+R+PE MPLVLGN+APQM+MPSCGGSLFASELVECCRELDEGHRAWA+HKKETAWRLRR
Sbjct: 61  PERIPETMPLVLGNIAPQMTMPSCGGSLFASELVECCRELDEGHRAWASHKKETAWRLRR 120

Query: 121 QELQLESEKASRIRQKMEEVEGKVKALREEEKIALERIEAEYKEQLAGFRKDAEAKEQKL 180
           QELQLESEKASRIRQKMEEVEGKVKA+REEEKIALERIEAEYKEQLAG RKDAEAKEQKL
Sbjct: 121 QELQLESEKASRIRQKMEEVEGKVKAVREEEKIALERIEAEYKEQLAGLRKDAEAKEQKL 180

Query: 181 AEQWAAKHMSLTKFLEHMGCRTRIAESSGR 211
           AEQWAAKH+SLTKFLEHMGCRT+I+ESSGR
Sbjct: 181 AEQWAAKHLSLTKFLEHMGCRTKISESSGR 210

[Close]

BLAST of PI0003747 vs. TAIR 10
Match: AT2G37630.1 (myb-like HTH transcriptional regulator family protein )

HSP 1 Score: 224.9 bits (572), Expect = 5.9e-59
Identity = 134/214 (62.62%), Postives = 160/214 (74.77%), Query Frame = 0


Query: 1   MATSNGGFLQTDSSTPPPS--LPPWLSNSNGGSSLRPPSPSVTLTLSSPTVPA---YTPI 60
           MA SNGGFL ++    PP+  +PPWL+ SN G+++    PSVTLTLS  TV A     PI
Sbjct: 156 MANSNGGFLHSEQQVQPPNPVIPPWLATSNNGNNVVARPPSVTLTLSPSTVAAAAPQPPI 215

Query: 61  PWL--QQPDRMPENMP--LVLGNLAPQMSMPSCGG---SLFASELVECCRELDEGHRAWA 120
           PWL  QQP+R  EN P  LVLG++     MPSC G   S+F SELVECCREL+EGHRAWA
Sbjct: 216 PWLQQQQPER-AENGPGGLVLGSM-----MPSCSGSSESVFLSELVECCRELEEGHRAWA 275

Query: 121 AHKKETAWRLRRQELQLESEKASRIRQKMEEVEGKVKALREEEKIALERIEAEYKEQLAG 180
            HKKE AWRLRR ELQLESEK  R R+KMEE+E K+KALREE+K A+E+IE EY+EQL G
Sbjct: 276 DHKKEAAWRLRRLELQLESEKTCRQREKMEEIEAKMKALREEQKNAMEKIEGEYREQLVG 335

Query: 181 FRKDAEAKEQKLAEQWAAKHMSLTKFLE-HMGCR 202
            R+DAEAK+QKLA+QW ++H+ LTKFLE  MGCR
Sbjct: 336 LRRDAEAKDQKLADQWTSRHIRLTKFLEQQMGCR 363

The following BLAST results are available for this feature:

BLAST of PI0003747 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O80931	8.3e-58	62.62	Transcription factor AS1 OS=Arabidopsis thaliana OX=3702 GN=AS1 PE=1 SV=1	[more]
Q94IB1	5.6e-38	50.53	Protein rough sheath 2 homolog OS=Oryza sativa subsp. japonica OX=39947 GN=RS2 P...	[more]
Q9S7B2	4.9e-34	45.73	Protein rough sheath 2 OS=Zea mays OX=4577 GN=RS2 PE=1 SV=1	[more]

BLAST of PI0003747 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3DN74	1.6e-109	99.52	Transcription factor AS1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffol...	[more]
A0A1S3B5G1	1.6e-109	99.52	transcription factor AS1 OS=Cucumis melo OX=3656 GN=LOC103486384 PE=4 SV=1	[more]
A0A0A0LAJ9	3.1e-108	99.05	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G734210 PE=4 SV=1	[more]
A0A6J1J530	1.8e-103	94.29	transcription factor AS1-like OS=Cucurbita maxima OX=3661 GN=LOC111481437 PE=4 S...	[more]
A0A6J1I2B9	1.8e-103	93.33	transcription factor AS1-like OS=Cucurbita maxima OX=3661 GN=LOC111470250 PE=4 S...	[more]

BLAST of PI0003747 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008442545.1	3.4e-109	99.52	PREDICTED: transcription factor AS1 [Cucumis melo] >KAA0044093.1 transcription f...	[more]
XP_004137788.1	6.4e-108	99.05	transcription factor AS1 [Cucumis sativus] >KGN58868.1 hypothetical protein Csa_...	[more]
XP_038903104.1	1.2e-106	97.14	transcription factor AS1-like [Benincasa hispida] >XP_038903105.1 transcription ...	[more]
XP_022982614.1	3.6e-103	94.29	transcription factor AS1-like [Cucurbita maxima] >XP_022982615.1 transcription f...	[more]
KAG6596407.1	3.6e-103	93.33	E3 ubiquitin-protein ligase PRT6, partial [Cucurbita argyrosperma subsp. sororia...	[more]

BLAST of PI0003747 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G37630.1	5.9e-59	62.62	myb-like HTH transcriptional regulator family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 159..179
None	No IPR available	COILS	Coil	Coil	coord: 120..157
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 24..46
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..46
None	No IPR available	PANTHER	PTHR47214	PROTEIN ROUGH SHEATH 2 HOMOLOG	coord: 18..210
IPR031055	Protein rough sheath 2 /ASYMMETRIC LEAVES1	PANTHER	PTHR47214:SF3	TRANSCRIPTION FACTOR AS1	coord: 18..210

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0003747.1	PI0003747.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010338	leaf formation
biological_process	GO:0006351	transcription, DNA-templated
cellular_component	GO:0005634	nucleus