Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGGCCCGAGGAGGCGGAGATGGAGGTTTTAGTCCACGCGCCACCGTAGAAGATATCCGGAGACGGCTGCTTCGACCGTCATCATCACTACACTCTCCTCCACCGACGCCGTTATTCTACTTCTTTCAATAATTTCACTCGGTAATGTTTTCAATCTCCTCAGGGCCTGAACTTCTATAATTTATCTTGATTCATTCCAGGTTTTCTCTCGGTAAAAATGCTCAAGAACTAAATTCCTCGCAATTCGAGGCGAATTACATGAGGCTGTCCCGGAGTCGAGAAGCGAAAAAAGGAGAAACAGCAAGCAAGAAGAGGAAGCTCGAAGATTACTTGGATCCGGTTCTTCTCTCTGCAATTTCTTCCAAGATCAGTCACTTGGAAAAGATTCCTAAGATCACGGTGAAGAGAGAGGTTAGGGATTTTGAGTGGCATGTCGATGAATTGAGGATATGGACGGAGGATACGGCAGTTGGAAAGGAGAAAATCGATGCTGTTAATCTTGGTAACGACTCTGATAATCTCATAGAAAACGATGTTGAAGGAGATGTTAAGTTTTCTACTCCGTTTCAAAAATTTGAGCAGAATGCATTGGTACTGTTCGAATTATGAATTGAAATTGAAATATTAACTAACAAATGTACGAATATAAGAAGTTGAATAGAAAAAAGAACATCATAGACTTCTGTCTGTTCATTTGCATCTTGTAGTCATACCTGTACTGCTTCTGAGCTGAATTCTCCATCCCAATCTTCAAATTCCCTGTCCATTTATTTCACATACTTTTCTATTCAAAATCTGGAAACGCAGCTATTCAGTACTTCTCTCAAAGCACCAAATACGTGCTCAATTGTGCTTGACTGA
mRNA sequence
ATGGAGGCCCGAGGAGGCGGAGATGGAGGTTTTAGTCCACGCGCCACCGTAGAAGATATCCGGAGACGGCTGCTTCGACCGTCATCATCACTACACTCTCCTCCACCGACGCCGTTTTCTCTCGGTAAAAATGCTCAAGAACTAAATTCCTCGCAATTCGAGGCGAATTACATGAGGCTGTCCCGGAGTCGAGAAGCGAAAAAAGGAGAAACAGCAAGCAAGAAGAGGAAGCTCGAAGATTACTTGGATCCGGTTCTTCTCTCTGCAATTTCTTCCAAGATCAGTCACTTGGAAAAGATTCCTAAGATCACGGTGAAGAGAGAGGTTAGGGATTTTGAGTGGCATGTCGATGAATTGAGGATATGGACGGAGGATACGGCAGTTGGAAAGGAGAAAATCGATGCTGTTAATCTTGGTAACGACTCTGATAATCTCATAGAAAACGATGTTGAAGGAGATGTTAAGTTTTCTACTCCGTTTCAAAAATTTGAGCAGAATGCATTGACTTCTGTCTGTTCATTTGCATCTTGTAGTCATACCTGTACTGCTTCTGAGCTGAATTCTCCATCCCAATCTTCAAATTCCCTGTCCATTTATTTCACATACTTTTCTATTCAAAATCTGGAAACGCAGCTATTCAGTACTTCTCTCAAAGCACCAAATACGTGCTCAATTGTGCTTGACTGA
Coding sequence (CDS)
ATGGAGGCCCGAGGAGGCGGAGATGGAGGTTTTAGTCCACGCGCCACCGTAGAAGATATCCGGAGACGGCTGCTTCGACCGTCATCATCACTACACTCTCCTCCACCGACGCCGTTTTCTCTCGGTAAAAATGCTCAAGAACTAAATTCCTCGCAATTCGAGGCGAATTACATGAGGCTGTCCCGGAGTCGAGAAGCGAAAAAAGGAGAAACAGCAAGCAAGAAGAGGAAGCTCGAAGATTACTTGGATCCGGTTCTTCTCTCTGCAATTTCTTCCAAGATCAGTCACTTGGAAAAGATTCCTAAGATCACGGTGAAGAGAGAGGTTAGGGATTTTGAGTGGCATGTCGATGAATTGAGGATATGGACGGAGGATACGGCAGTTGGAAAGGAGAAAATCGATGCTGTTAATCTTGGTAACGACTCTGATAATCTCATAGAAAACGATGTTGAAGGAGATGTTAAGTTTTCTACTCCGTTTCAAAAATTTGAGCAGAATGCATTGACTTCTGTCTGTTCATTTGCATCTTGTAGTCATACCTGTACTGCTTCTGAGCTGAATTCTCCATCCCAATCTTCAAATTCCCTGTCCATTTATTTCACATACTTTTCTATTCAAAATCTGGAAACGCAGCTATTCAGTACTTCTCTCAAAGCACCAAATACGTGCTCAATTGTGCTTGACTGA
Protein sequence
MEARGGGDGGFSPRATVEDIRRRLLRPSSSLHSPPPTPFSLGKNAQELNSSQFEANYMRLSRSREAKKGETASKKRKLEDYLDPVLLSAISSKISHLEKIPKITVKREVRDFEWHVDELRIWTEDTAVGKEKIDAVNLGNDSDNLIENDVEGDVKFSTPFQKFEQNALTSVCSFASCSHTCTASELNSPSQSSNSLSIYFTYFSIQNLETQLFSTSLKAPNTCSIVLD
Homology
BLAST of PI0003731 vs. ExPASy TrEMBL
Match:
A0A0A0L270 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G295500 PE=4 SV=1)
HSP 1 Score: 404.1 bits (1037), Expect = 4.0e-109
Identity = 208/228 (91.23%), Postives = 218/228 (95.61%), Query Frame = 0
Query: 1 MEARGGGDGGFSPRATVEDIRRRLLRPSSSLHSPPPTPFSLGKNAQELNSSQFEANYMRL 60
MEA GGG+GGFS RATVEDIRRRLLRPSSSLHSPPPTPFSLGKNAQ+ NSSQFEANYMRL
Sbjct: 1 MEAPGGGNGGFSARATVEDIRRRLLRPSSSLHSPPPTPFSLGKNAQDRNSSQFEANYMRL 60
Query: 61 SRSREAKKGETASKKRKLEDYLDPVLLSAISSKISHLEKIPKITVKREVRDFEWHVDELR 120
S SREAKKGET+SK+RKLEDYLDPVLLSAISSKIS LEKIPKITVKR+VRDFEW VDELR
Sbjct: 61 SWSREAKKGETSSKERKLEDYLDPVLLSAISSKISRLEKIPKITVKRKVRDFEWDVDELR 120
Query: 121 IWTEDTAVGKEKIDAVNLGNDSDNLIENDVEGDVKFSTPFQKFEQNALTSVCSFASCSHT 180
+WTEDTAVGKEKIDAVNLGNDSDNLIENDV+GDVKFSTPFQKFEQNAL SVCSFASCSHT
Sbjct: 121 MWTEDTAVGKEKIDAVNLGNDSDNLIENDVDGDVKFSTPFQKFEQNALASVCSFASCSHT 180
Query: 181 CTASELNSPSQSSNSLSIYFTYFSIQNLETQLFSTSLKAPNTCSIVLD 229
CTASEL SPSQSSNS SIYFTYFS+Q LETQLFSTSLKAPNTCSI++D
Sbjct: 181 CTASELKSPSQSSNSRSIYFTYFSVQTLETQLFSTSLKAPNTCSIMID 228
BLAST of PI0003731 vs. ExPASy TrEMBL
Match:
A0A5A7STW4 (Putative Transducin/WD40 repeat-like superfamily protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold500G00230 PE=4 SV=1)
HSP 1 Score: 286.2 bits (731), Expect = 1.2e-73
Identity = 150/176 (85.23%), Postives = 158/176 (89.77%), Query Frame = 0
Query: 1 MEARGGGDGGFSPRATVEDIRRRLLRPSSSLHSPPPTP--------FSLGKNAQELNSSQ 60
MEARGGGDGGFSPRATVEDI+RRLLRPSSSLHSPPP P FSLGKNAQ+ NSSQ
Sbjct: 1 MEARGGGDGGFSPRATVEDIQRRLLRPSSSLHSPPPPPTPLFYFFQFSLGKNAQDRNSSQ 60
Query: 61 FEANYMRLSRSREAKKGETASKKRKLEDYLDPVLLSAISSKISHLEKIPKITVKREVRDF 120
FEANYMRLSRSR E +SK+RKLEDYLDPVLLSAISSKI+ EKIP+ITVKREVRDF
Sbjct: 61 FEANYMRLSRSR-----EISSKERKLEDYLDPVLLSAISSKINRFEKIPRITVKREVRDF 120
Query: 121 EWHVDELRIWTEDTAVGKEKIDAVNLGNDSDNLIENDVEGDVKFSTPFQKFEQNAL 169
EWHVDELR+WTEDTAVGKEKIDAVNLGNDSDNLIENDV+GDVKFSTPFQKFEQNAL
Sbjct: 121 EWHVDELRMWTEDTAVGKEKIDAVNLGNDSDNLIENDVDGDVKFSTPFQKFEQNAL 171
BLAST of PI0003731 vs. ExPASy TrEMBL
Match:
A0A1S3BHM2 (uncharacterized protein LOC103490160 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103490160 PE=4 SV=1)
HSP 1 Score: 286.2 bits (731), Expect = 1.2e-73
Identity = 150/176 (85.23%), Postives = 158/176 (89.77%), Query Frame = 0
Query: 1 MEARGGGDGGFSPRATVEDIRRRLLRPSSSLHSPPPTP--------FSLGKNAQELNSSQ 60
MEARGGGDGGFSPRATVEDI+RRLLRPSSSLHSPPP P FSLGKNAQ+ NSSQ
Sbjct: 1 MEARGGGDGGFSPRATVEDIQRRLLRPSSSLHSPPPPPTPLFYFFQFSLGKNAQDRNSSQ 60
Query: 61 FEANYMRLSRSREAKKGETASKKRKLEDYLDPVLLSAISSKISHLEKIPKITVKREVRDF 120
FEANYMRLSRSR E +SK+RKLEDYLDPVLLSAISSKI+ EKIP+ITVKREVRDF
Sbjct: 61 FEANYMRLSRSR-----EISSKERKLEDYLDPVLLSAISSKINRFEKIPRITVKREVRDF 120
Query: 121 EWHVDELRIWTEDTAVGKEKIDAVNLGNDSDNLIENDVEGDVKFSTPFQKFEQNAL 169
EWHVDELR+WTEDTAVGKEKIDAVNLGNDSDNLIENDV+GDVKFSTPFQKFEQNAL
Sbjct: 121 EWHVDELRMWTEDTAVGKEKIDAVNLGNDSDNLIENDVDGDVKFSTPFQKFEQNAL 171
BLAST of PI0003731 vs. ExPASy TrEMBL
Match:
A0A6J1I9M7 (uncharacterized protein LOC111471294 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111471294 PE=4 SV=1)
HSP 1 Score: 246.1 bits (627), Expect = 1.4e-61
Identity = 129/168 (76.79%), Postives = 142/168 (84.52%), Query Frame = 0
Query: 1 MEARGGGDGGFSPRATVEDIRRRLLRPSSSLHSPPPTPFSLGKNAQELNSSQFEANYMRL 60
ME GGGDGGFSPRATVEDI+RRLLRP SS+HSPPPTPFS GK+ Q NSSQFEAN M L
Sbjct: 1 MEVGGGGDGGFSPRATVEDIQRRLLRP-SSIHSPPPTPFSRGKDVQGRNSSQFEANAMGL 60
Query: 61 SRSREAKKGETASKKRKLEDYLDPVLLSAISSKISHLEKIPKITVKREVRDFEWHVDELR 120
R REAK+GETAS+KRKLEDYLDPVLLSA+SSKIS +K+PK+TVKREVRDFEW V ELR
Sbjct: 61 YRKREAKEGETASRKRKLEDYLDPVLLSAVSSKISRAQKVPKMTVKREVRDFEWPVAELR 120
Query: 121 IWTEDTAVGKEKIDAVNLGNDSDNLIENDVEGDVKFSTPFQKFEQNAL 169
+ +D+ VGK K + VNLGNDSD L END EGDVK STPFQKFEQ AL
Sbjct: 121 MLMDDSTVGKGKTNTVNLGNDSDYLTENDEEGDVKISTPFQKFEQTAL 167
BLAST of PI0003731 vs. ExPASy TrEMBL
Match:
A0A6J1HFI5 (uncharacterized protein LOC111463108 OS=Cucurbita moschata OX=3662 GN=LOC111463108 PE=4 SV=1)
HSP 1 Score: 244.2 bits (622), Expect = 5.3e-61
Identity = 127/168 (75.60%), Postives = 143/168 (85.12%), Query Frame = 0
Query: 1 MEARGGGDGGFSPRATVEDIRRRLLRPSSSLHSPPPTPFSLGKNAQELNSSQFEANYMRL 60
ME GGGDGGFSPRA+VEDI+RRLLRP SS+HSPPPTPFS GK+ Q NSSQFEAN M L
Sbjct: 1 MEVGGGGDGGFSPRASVEDIQRRLLRP-SSIHSPPPTPFSRGKDVQGRNSSQFEANAMGL 60
Query: 61 SRSREAKKGETASKKRKLEDYLDPVLLSAISSKISHLEKIPKITVKREVRDFEWHVDELR 120
R +EAK+GETA +KRKLEDYLDPVLLSA+SSKIS +K+PK+ VKREVRDFEW V ELR
Sbjct: 61 YRKQEAKEGETARRKRKLEDYLDPVLLSAVSSKISRAQKVPKMKVKREVRDFEWPVAELR 120
Query: 121 IWTEDTAVGKEKIDAVNLGNDSDNLIENDVEGDVKFSTPFQKFEQNAL 169
+ +D+ VGK KI+ VNLGNDSDNL EN+ EGDVKFSTPFQKFEQ AL
Sbjct: 121 MLMDDSTVGKGKINTVNLGNDSDNLTENNEEGDVKFSTPFQKFEQTAL 167
BLAST of PI0003731 vs. NCBI nr
Match:
KAE8649528.1 (hypothetical protein Csa_017968 [Cucumis sativus])
HSP 1 Score: 305.8 bits (782), Expect = 3.0e-79
Identity = 157/171 (91.81%), Postives = 164/171 (95.91%), Query Frame = 0
Query: 1 MEARGGGDGGFSPRATVEDIRRRLLRPSSSLHSPPPTPFSLGKNAQELNSSQFEANYMRL 60
MEA GGG+GGFS RATVEDIRRRLLRPSSSLHSPPPTPFSLGKNAQ+ NSSQFEANYMRL
Sbjct: 1 MEAPGGGNGGFSARATVEDIRRRLLRPSSSLHSPPPTPFSLGKNAQDRNSSQFEANYMRL 60
Query: 61 SRSREAKKGETASKKRKLEDYLDPVLLSAISSKISHLEKIPKITVKREVRDFEWHVDELR 120
S SREAKKGET+SK+RKLEDYLDPVLLSAISSKIS LEKIPKITVKR+VRDFEW VDELR
Sbjct: 61 SWSREAKKGETSSKERKLEDYLDPVLLSAISSKISRLEKIPKITVKRKVRDFEWDVDELR 120
Query: 121 IWTEDTAVGKEKIDAVNLGNDSDNLIENDVEGDVKFSTPFQKFEQNALTSV 172
+WTEDTAVGKEKIDAVNLGNDSDNLIENDV+GDVKFSTPFQKFEQNAL SV
Sbjct: 121 MWTEDTAVGKEKIDAVNLGNDSDNLIENDVDGDVKFSTPFQKFEQNALVSV 171
BLAST of PI0003731 vs. NCBI nr
Match:
XP_008447784.1 (PREDICTED: uncharacterized protein LOC103490160 isoform X2 [Cucumis melo] >KAA0032639.1 putative Transducin/WD40 repeat-like superfamily protein [Cucumis melo var. makuwa] >TYK23519.1 putative Transducin/WD40 repeat-like superfamily protein [Cucumis melo var. makuwa])
HSP 1 Score: 286.2 bits (731), Expect = 2.5e-73
Identity = 150/176 (85.23%), Postives = 158/176 (89.77%), Query Frame = 0
Query: 1 MEARGGGDGGFSPRATVEDIRRRLLRPSSSLHSPPPTP--------FSLGKNAQELNSSQ 60
MEARGGGDGGFSPRATVEDI+RRLLRPSSSLHSPPP P FSLGKNAQ+ NSSQ
Sbjct: 1 MEARGGGDGGFSPRATVEDIQRRLLRPSSSLHSPPPPPTPLFYFFQFSLGKNAQDRNSSQ 60
Query: 61 FEANYMRLSRSREAKKGETASKKRKLEDYLDPVLLSAISSKISHLEKIPKITVKREVRDF 120
FEANYMRLSRSR E +SK+RKLEDYLDPVLLSAISSKI+ EKIP+ITVKREVRDF
Sbjct: 61 FEANYMRLSRSR-----EISSKERKLEDYLDPVLLSAISSKINRFEKIPRITVKREVRDF 120
Query: 121 EWHVDELRIWTEDTAVGKEKIDAVNLGNDSDNLIENDVEGDVKFSTPFQKFEQNAL 169
EWHVDELR+WTEDTAVGKEKIDAVNLGNDSDNLIENDV+GDVKFSTPFQKFEQNAL
Sbjct: 121 EWHVDELRMWTEDTAVGKEKIDAVNLGNDSDNLIENDVDGDVKFSTPFQKFEQNAL 171
BLAST of PI0003731 vs. NCBI nr
Match:
XP_038877636.1 (uncharacterized protein LOC120069887 isoform X1 [Benincasa hispida])
HSP 1 Score: 268.5 bits (685), Expect = 5.4e-68
Identity = 139/168 (82.74%), Postives = 151/168 (89.88%), Query Frame = 0
Query: 1 MEARGGGDGGFSPRATVEDIRRRLLRPSSSLHSPPPTPFSLGKNAQELNSSQFEANYMRL 60
ME RGGGDGGFSPRATVEDI+RRL+RPSSSLHS PPTPFS GK AQ SSQFEA YMRL
Sbjct: 1 MEPRGGGDGGFSPRATVEDIQRRLVRPSSSLHSLPPTPFSRGKAAQGRISSQFEAKYMRL 60
Query: 61 SRSREAKKGETASKKRKLEDYLDPVLLSAISSKISHLEKIPKITVKREVRDFEWHVDELR 120
++REAKKGETASKKRKLEDYLDPVLLSA+SSKIS +EKIPK+TVKREVRDFEW V+ELR
Sbjct: 61 YQNREAKKGETASKKRKLEDYLDPVLLSAVSSKISRMEKIPKMTVKREVRDFEWPVNELR 120
Query: 121 IWTEDTAVGKEKIDAVNLGNDSDNLIENDVEGDVKFSTPFQKFEQNAL 169
+ EDT VGKEKIDAVNLGND+DNLIEN+ +GDVKFSTPFQKFE AL
Sbjct: 121 MLMEDTTVGKEKIDAVNLGNDTDNLIENNEDGDVKFSTPFQKFEHTAL 168
BLAST of PI0003731 vs. NCBI nr
Match:
XP_023518840.1 (uncharacterized protein LOC111782239 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 253.4 bits (646), Expect = 1.8e-63
Identity = 132/168 (78.57%), Postives = 145/168 (86.31%), Query Frame = 0
Query: 1 MEARGGGDGGFSPRATVEDIRRRLLRPSSSLHSPPPTPFSLGKNAQELNSSQFEANYMRL 60
ME GGGDGGFSPRATVEDI+RRLLRP SS+HSPPPTPFS GK+ Q NSSQFEAN M L
Sbjct: 1 MEVGGGGDGGFSPRATVEDIQRRLLRP-SSIHSPPPTPFSRGKDVQGRNSSQFEANAMGL 60
Query: 61 SRSREAKKGETASKKRKLEDYLDPVLLSAISSKISHLEKIPKITVKREVRDFEWHVDELR 120
R REAK+GETAS+KRKLEDYLDPVLLSA+SSKIS +K+PK+TVKREVRDFEW V ELR
Sbjct: 61 YRKREAKEGETASRKRKLEDYLDPVLLSAVSSKISRAQKVPKMTVKREVRDFEWPVAELR 120
Query: 121 IWTEDTAVGKEKIDAVNLGNDSDNLIENDVEGDVKFSTPFQKFEQNAL 169
+ +D+ VGK KI+ VNLGNDSDNL END EGDVKFSTPFQKFEQ AL
Sbjct: 121 MLMDDSTVGKGKINTVNLGNDSDNLTENDEEGDVKFSTPFQKFEQTAL 167
BLAST of PI0003731 vs. NCBI nr
Match:
XP_022972790.1 (uncharacterized protein LOC111471294 isoform X1 [Cucurbita maxima])
HSP 1 Score: 246.1 bits (627), Expect = 2.9e-61
Identity = 129/168 (76.79%), Postives = 142/168 (84.52%), Query Frame = 0
Query: 1 MEARGGGDGGFSPRATVEDIRRRLLRPSSSLHSPPPTPFSLGKNAQELNSSQFEANYMRL 60
ME GGGDGGFSPRATVEDI+RRLLRP SS+HSPPPTPFS GK+ Q NSSQFEAN M L
Sbjct: 1 MEVGGGGDGGFSPRATVEDIQRRLLRP-SSIHSPPPTPFSRGKDVQGRNSSQFEANAMGL 60
Query: 61 SRSREAKKGETASKKRKLEDYLDPVLLSAISSKISHLEKIPKITVKREVRDFEWHVDELR 120
R REAK+GETAS+KRKLEDYLDPVLLSA+SSKIS +K+PK+TVKREVRDFEW V ELR
Sbjct: 61 YRKREAKEGETASRKRKLEDYLDPVLLSAVSSKISRAQKVPKMTVKREVRDFEWPVAELR 120
Query: 121 IWTEDTAVGKEKIDAVNLGNDSDNLIENDVEGDVKFSTPFQKFEQNAL 169
+ +D+ VGK K + VNLGNDSD L END EGDVK STPFQKFEQ AL
Sbjct: 121 MLMDDSTVGKGKTNTVNLGNDSDYLTENDEEGDVKISTPFQKFEQTAL 167
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A0A0L270 | 4.0e-109 | 91.23 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G295500 PE=4 SV=1 | [more] |
A0A5A7STW4 | 1.2e-73 | 85.23 | Putative Transducin/WD40 repeat-like superfamily protein OS=Cucumis melo var. ma... | [more] |
A0A1S3BHM2 | 1.2e-73 | 85.23 | uncharacterized protein LOC103490160 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10... | [more] |
A0A6J1I9M7 | 1.4e-61 | 76.79 | uncharacterized protein LOC111471294 isoform X1 OS=Cucurbita maxima OX=3661 GN=L... | [more] |
A0A6J1HFI5 | 5.3e-61 | 75.60 | uncharacterized protein LOC111463108 OS=Cucurbita moschata OX=3662 GN=LOC1114631... | [more] |
Match Name | E-value | Identity | Description | |
KAE8649528.1 | 3.0e-79 | 91.81 | hypothetical protein Csa_017968 [Cucumis sativus] | [more] |
XP_008447784.1 | 2.5e-73 | 85.23 | PREDICTED: uncharacterized protein LOC103490160 isoform X2 [Cucumis melo] >KAA00... | [more] |
XP_038877636.1 | 5.4e-68 | 82.74 | uncharacterized protein LOC120069887 isoform X1 [Benincasa hispida] | [more] |
XP_023518840.1 | 1.8e-63 | 78.57 | uncharacterized protein LOC111782239 [Cucurbita pepo subsp. pepo] | [more] |
XP_022972790.1 | 2.9e-61 | 76.79 | uncharacterized protein LOC111471294 isoform X1 [Cucurbita maxima] | [more] |
Match Name | E-value | Identity | Description | |