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Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. AGACGCCGATATCTGTGTTTTGAGTTCTCAACGAAGGGAAACCAGTTGCCTTGCCCTCCTTATACATTTCCCATTCATTCTCTTCTTCTTCTTTCATTTCCCAAAATCCGAGAGACAGCAGTTAGGAAAATGAGCGGCACCGTCAAGAAAGTTACCGATGTTGCTTTCAAAGCATCCAAGAACATCGATTGGGATGGCATGGCCAAGCTTTTGGTCTCCGATGAAGCTCGCAAGGAGTTCTCATCCCTTCGCCGAGCCTTCGAGGAGGTTAACTCAACCCTCCAGACTAAATTCAGCCAGGTCCCGAAGATTCCAATTTCTCCCTTTCTTTTTCCTTCTTATGTTCTTCTCTGCAAGATCTCTCTTTTTTTGCGATTTTATTTGGCTTCCATGTTTTGAGATTGTTCTTATTTTAATTGTTTTTTTTGAGGAATTTATGTGCTTGTGTTTAATTCGGCCTTGATAACTGAGAACCGTAATGTGTAAATCCGTTGTGATTTTCTTCTTAATTGGTATATTGATAACTGAGAACCGTAATGTGTCGTTTTTTGTGGGCTTGAGAGGCTACTGTTGATTTAGTTGTGGTCTGTTTGATTGAGGAAGATCGATCGTGCAGAGTAGAACTGGACTTTAGAAAACAAAAATGTTTCTTGTTGTAAAGGAAACATTTCGAACTTTATTGGATCGAGATACTGTTATATGCATCAGAGGATAAGAAGAGGTTATATGATTCTTTATTGGAGCAATCACAATGTCTCCGGTAAACTTAGTTGAACAATTTCTATTTTATGACTATTGTATCAGCTACTATATCAGATATGGATTACTTATTGCATATAGTTCAAGTGCAAATTGGAGTGTTGGAACATGGCTCAAATAGTAAGATTTCAGCACTTCTCTTATGAGTTATCTGTTTTAATCACTCCCGTGTGTGTTTAAAAAAGAAGTGCAATAGGAAGCTAAAACGATTGCTCATAAAGATGACCCTGAAATTTTCTGATTTTGTTTTCTATCGATCAGCAAGTTGATCGTATTAATGACTAAGGAGTGCTTTTAATTGCGTTGTTTTGCCGTTGATGAAGTGAAATTTCCCTCTCACGAGGAAGGGATTGAATTTTTTTTTTCTGTATGAAAGTACTCTATTAGTGAAAATTGCTTCCTTATTGACTTTGCCCAAAACTTTCAAGGATTGCAGTATTATAAACTGTTTATCTCTGTGTATAGGAACCAGAGCCCATAGACTGGGAATATTACAGAAAGGGAATTGGTTCCCGCTTGGTGGACATGTACAAAGAGGCTTATGACGGTATGCTTAATTCACTTGTCATACGGAGTTCATGTTTCGACTTTTCTGTGTGATATTAGACTAGGCAATATTGGGATTTTTTAGCACATGGTTGCCTGTGATGCTTCTCCAATTCTCCAGTCTTCAAAGATCATATACATACATTGTATAATTTGAGATTTTTGTATTTGATGGCTTGGGCAATCAGTGAATCAATCACTATAATTTTTAAGTGGCCCTTTTAGCTCTGGATTTTTCACTACCCTATTACTGAAATTCTGTGATTGAAGTATTTACAACATCTCTTTTATTGAAGCACATTTTGCCTTTTATCGCGTATAATAGAACCATAAAGTTTTCTGAAGCTCTTGTTCTAAGTGGCCCAAATCTTGTTGTCATAATGCAATTTGCTTGATAAATAAGAAGGCTGGCTATGAATTTAGCTTTCATTCCCCCACATCTCTCACTTATAAAATGGGACTCAGAACCATGGATTGTCATTAGAGTACAAAGCAACGCCCTTATGATTTCTTGCCTTCCTTATTCATTACGCTTCGGTTGATCTGGTTCCTTTTTAGGCATTGAGGTCCCCAAGTTCGTAGACACTGTGACTCCACAGTACAAGCCTAAATTTGATGCATTGGTAAGCACTATTTATATTTAAGTAGATCTGTCTGTGTTGCTCTCTGCCTAGGTGCCTCATTCATTTGTTTATATGGCAGCTGGTAGAATTGAAGGAAGCTGAAGCAAAATCCCTAAAGGAGTCTGAGCGGTTGGAGAAGGAGATTCTTGAAGTTCAAGAAATGAAGGTATGGAAAAGAAAAGCTCATTTGGTTTTCAATTTTGTAGAAACGAATTCTCACAGCCTATTATTCTCATCAGAAAAAGATCAGCACCATGACTGCTGATGAATACTTTGAGAAGCATCCCGAGCTGAGGAAGAAGTTTGACGATGAAATCCGAAATGACTACTGGGGCTATTGATTTGGAAGTTAAGGTTGAAGCACCAAAGTTTCAGAATTTAATTTCATGAATCTTCCGGGACTTGTTTTGCTGCAAATGTTTTGTCAGTAATAAAACAAACCAGATAGTTCCTCCGCAATTTGGTTGCATTTGCTTTCAGAATCATGGTGACGAAATTGATTAGAGAAACTGAGTTTTTTCCTTGAAATGATAGTGTGAGAGTTCCAAATAACTCTAAACGTACATTATCATGGAGAATGCATTTTTTTAATAATAAGATTATATATTGGCTTCCTTATTATTCTGAGATCGATAAAGAGATGTTGCAAAGCTTTAAATTCATGGAACTCAACTGTTTGGTTGTTGCAATACAATCTCATGTTTAGAATTG mRNA sequence AGACGCCGATATCTGTGTTTTGAGTTCTCAACGAAGGGAAACCAGTTGCCTTGCCCTCCTTATACATTTCCCATTCATTCTCTTCTTCTTCTTTCATTTCCCAAAATCCGAGAGACAGCAGTTAGGAAAATGAGCGGCACCGTCAAGAAAGTTACCGATGTTGCTTTCAAAGCATCCAAGAACATCGATTGGGATGGCATGGCCAAGCTTTTGGTCTCCGATGAAGCTCGCAAGGAGTTCTCATCCCTTCGCCGAGCCTTCGAGGAGGTTAACTCAACCCTCCAGACTAAATTCAGCCAGGAACCAGAGCCCATAGACTGGGAATATTACAGAAAGGGAATTGGTTCCCGCTTGGTGGACATGTACAAAGAGGCTTATGACGGCATTGAGGTCCCCAAGTTCGTAGACACTGTGACTCCACAGTACAAGCCTAAATTTGATGCATTGCTGGTAGAATTGAAGGAAGCTGAAGCAAAATCCCTAAAGGAGTCTGAGCGGTTGGAGAAGGAGATTCTTGAAGTTCAAGAAATGAAGAAAAAGATCAGCACCATGACTGCTGATGAATACTTTGAGAAGCATCCCGAGCTGAGGAAGAAGTTTGACGATGAAATCCGAAATGACTACTGGGGCTATTGATTTGGAAGTTAAGGTTGAAGCACCAAAGTTTCAGAATTTAATTTCATGAATCTTCCGGGACTTGTTTTGCTGCAAATGTTTTGTCAGTAATAAAACAAACCAGATAGTTCCTCCGCAATTTGGTTGCATTTGCTTTCAGAATCATGGTGACGAAATTGATTAGAGAAACTGAGTTTTTTCCTTGAAATGATAGTGTGAGAGTTCCAAATAACTCTAAACGTACATTATCATGGAGAATGCATTTTTTTAATAATAAGATTATATATTGGCTTCCTTATTATTCTGAGATCGATAAAGAGATGTTGCAAAGCTTTAAATTCATGGAACTCAACTGTTTGGTTGTTGCAATACAATCTCATGTTTAGAATTG Coding sequence (CDS) ATGAGCGGCACCGTCAAGAAAGTTACCGATGTTGCTTTCAAAGCATCCAAGAACATCGATTGGGATGGCATGGCCAAGCTTTTGGTCTCCGATGAAGCTCGCAAGGAGTTCTCATCCCTTCGCCGAGCCTTCGAGGAGGTTAACTCAACCCTCCAGACTAAATTCAGCCAGGAACCAGAGCCCATAGACTGGGAATATTACAGAAAGGGAATTGGTTCCCGCTTGGTGGACATGTACAAAGAGGCTTATGACGGCATTGAGGTCCCCAAGTTCGTAGACACTGTGACTCCACAGTACAAGCCTAAATTTGATGCATTGCTGGTAGAATTGAAGGAAGCTGAAGCAAAATCCCTAAAGGAGTCTGAGCGGTTGGAGAAGGAGATTCTTGAAGTTCAAGAAATGAAGAAAAAGATCAGCACCATGACTGCTGATGAATACTTTGAGAAGCATCCCGAGCTGAGGAAGAAGTTTGACGATGAAATCCGAAATGACTACTGGGGCTATTGA Protein sequence MSGTVKKVTDVAFKASKNIDWDGMAKLLVSDEARKEFSSLRRAFEEVNSTLQTKFSQEPEPIDWEYYRKGIGSRLVDMYKEAYDGIEVPKFVDTVTPQYKPKFDALLVELKEAEAKSLKESERLEKEILEVQEMKKKISTMTADEYFEKHPELRKKFDDEIRNDYWGY
Homology
BLAST of PI0003705 vs. ExPASy Swiss-Prot
Match: Q9FT52 (ATP synthase subunit d, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At3g52300 PE=1 SV=3) HSP 1 Score: 281.2 bits (718), Expect = 7.8e-75 Identity = 137/168 (81.55%), Postives = 155/168 (92.26%), Query Frame = 0
Query: 1 MSGTVKKVTDVAFKASKNIDWDGMAKLLVSDEARKEFSSLRRAFEEVNSTLQTKFSQEPE 60
MSG KK+ DVAFKAS+ IDWDGMAK+LV+DEAR+EFS+LRRAF+EVN+ LQTKFSQEPE
Sbjct: 1 MSGAGKKIADVAFKASRTIDWDGMAKVLVTDEARREFSNLRRAFDEVNTQLQTKFSQEPE 60
Query: 61 PIDWEYYRKGIGSRLVDMYKEAYDGIEVPKFVDTVTPQYKPKFDALLVELKEAEAKSLKE 120
PIDW+YYRKGIG+ +VD YKEAYD IE+PK+VD VTP+YKPKFDALLVELKEAE KSLKE
Sbjct: 61 PIDWDYYRKGIGAGIVDKYKEAYDSIEIPKYVDKVTPEYKPKFDALLVELKEAEQKSLKE 120
Query: 121 SERLEKEILEVQEMKKKISTMTADEYFEKHPELRKKFDDEIRNDYWGY 169
SERLEKEI +VQE+ KK+STMTADEYFEKHPEL+KKFDDEIRND WGY
Sbjct: 121 SERLEKEIADVQEISKKLSTMTADEYFEKHPELKKKFDDEIRNDNWGY 168
BLAST of PI0003705 vs. ExPASy TrEMBL
Match: A0A0A0KRL4 (ATP synthase subunit d, mitochondrial OS=Cucumis sativus OX=3659 GN=Csa_5G623540 PE=3 SV=1) HSP 1 Score: 323.6 bits (828), Expect = 5.0e-85 Identity = 163/168 (97.02%), Postives = 165/168 (98.21%), Query Frame = 0
Query: 1 MSGTVKKVTDVAFKASKNIDWDGMAKLLVSDEARKEFSSLRRAFEEVNSTLQTKFSQEPE 60
MSGT+KKVTDVAFKASKNIDWDGMAKLLVSDEARKEFSSLRRAFEEVNS LQTKFSQEPE
Sbjct: 1 MSGTIKKVTDVAFKASKNIDWDGMAKLLVSDEARKEFSSLRRAFEEVNSALQTKFSQEPE 60
Query: 61 PIDWEYYRKGIGSRLVDMYKEAYDGIEVPKFVDTVTPQYKPKFDALLVELKEAEAKSLKE 120
PIDWEYYRKGIGSRLVDMYKEAYDGIE+PKFVDTVTPQYKPKFDALLVELKEAEAKSLKE
Sbjct: 61 PIDWEYYRKGIGSRLVDMYKEAYDGIEIPKFVDTVTPQYKPKFDALLVELKEAEAKSLKE 120
Query: 121 SERLEKEILEVQEMKKKISTMTADEYFEKHPELRKKFDDEIRNDYWGY 169
SERLEKEI EVQEMKKKI TMTADEYFEKHPELRKKFDDEIRNDYWGY
Sbjct: 121 SERLEKEIAEVQEMKKKICTMTADEYFEKHPELRKKFDDEIRNDYWGY 168
BLAST of PI0003705 vs. ExPASy TrEMBL
Match: A0A6J1HUL8 (ATP synthase subunit d, mitochondrial OS=Cucurbita maxima OX=3661 GN=LOC111466347 PE=3 SV=1) HSP 1 Score: 322.4 bits (825), Expect = 1.1e-84 Identity = 163/168 (97.02%), Postives = 166/168 (98.81%), Query Frame = 0
Query: 1 MSGTVKKVTDVAFKASKNIDWDGMAKLLVSDEARKEFSSLRRAFEEVNSTLQTKFSQEPE 60
MSGTVKKVTDVAFKASKNIDWDGMAKLLVSDEARKEFSSLRRAFEEVNS+LQTKFSQEPE
Sbjct: 1 MSGTVKKVTDVAFKASKNIDWDGMAKLLVSDEARKEFSSLRRAFEEVNSSLQTKFSQEPE 60
Query: 61 PIDWEYYRKGIGSRLVDMYKEAYDGIEVPKFVDTVTPQYKPKFDALLVELKEAEAKSLKE 120
PIDWEYYRKGIGSRLVDMYKEAYD IEVPKFVDTVTPQYKPKFDALLVELKEAE KSLKE
Sbjct: 61 PIDWEYYRKGIGSRLVDMYKEAYDSIEVPKFVDTVTPQYKPKFDALLVELKEAEVKSLKE 120
Query: 121 SERLEKEILEVQEMKKKISTMTADEYFEKHPELRKKFDDEIRNDYWGY 169
SERLEKEI+EVQE+KKKISTMTADEYFEKHPELRKKFDDEIRNDYWGY
Sbjct: 121 SERLEKEIVEVQELKKKISTMTADEYFEKHPELRKKFDDEIRNDYWGY 168
BLAST of PI0003705 vs. ExPASy TrEMBL
Match: A0A6J1CDD8 (ATP synthase subunit d, mitochondrial OS=Momordica charantia OX=3673 GN=LOC111010189 PE=3 SV=1) HSP 1 Score: 320.9 bits (821), Expect = 3.3e-84 Identity = 161/168 (95.83%), Postives = 166/168 (98.81%), Query Frame = 0
Query: 1 MSGTVKKVTDVAFKASKNIDWDGMAKLLVSDEARKEFSSLRRAFEEVNSTLQTKFSQEPE 60
MSGTVKKV DVAFKASKNIDWDGMAKLLVSDEARKEF++LRRAF+EVNSTLQTKFSQEPE
Sbjct: 1 MSGTVKKVADVAFKASKNIDWDGMAKLLVSDEARKEFATLRRAFDEVNSTLQTKFSQEPE 60
Query: 61 PIDWEYYRKGIGSRLVDMYKEAYDGIEVPKFVDTVTPQYKPKFDALLVELKEAEAKSLKE 120
PIDWEYYRKGIGSRLVDMYKEAYD IEVPKFVDTVTPQYKPKFDALLVELKEAEAKSLKE
Sbjct: 61 PIDWEYYRKGIGSRLVDMYKEAYDSIEVPKFVDTVTPQYKPKFDALLVELKEAEAKSLKE 120
Query: 121 SERLEKEILEVQEMKKKISTMTADEYFEKHPELRKKFDDEIRNDYWGY 169
SERLEKE++EVQEMKKKISTMTADEYFEKHPELRKKFDDEIRNDYWGY
Sbjct: 121 SERLEKEVVEVQEMKKKISTMTADEYFEKHPELRKKFDDEIRNDYWGY 168
BLAST of PI0003705 vs. ExPASy TrEMBL
Match: A0A6J1G072 (ATP synthase subunit d, mitochondrial OS=Cucurbita moschata OX=3662 GN=LOC111449482 PE=3 SV=1) HSP 1 Score: 320.9 bits (821), Expect = 3.3e-84 Identity = 162/168 (96.43%), Postives = 165/168 (98.21%), Query Frame = 0
Query: 1 MSGTVKKVTDVAFKASKNIDWDGMAKLLVSDEARKEFSSLRRAFEEVNSTLQTKFSQEPE 60
MSGTVKKVTDVAFKASKNIDWDGMAKLLVSDEARKEFSSLRRAFEEVNS LQTKFSQEPE
Sbjct: 1 MSGTVKKVTDVAFKASKNIDWDGMAKLLVSDEARKEFSSLRRAFEEVNSALQTKFSQEPE 60
Query: 61 PIDWEYYRKGIGSRLVDMYKEAYDGIEVPKFVDTVTPQYKPKFDALLVELKEAEAKSLKE 120
PIDWEYYRKGIGSRLVDMYKEAYD IEVPKFVDTVTPQYKPKFD+LLVELKEAE KSLKE
Sbjct: 61 PIDWEYYRKGIGSRLVDMYKEAYDSIEVPKFVDTVTPQYKPKFDSLLVELKEAEVKSLKE 120
Query: 121 SERLEKEILEVQEMKKKISTMTADEYFEKHPELRKKFDDEIRNDYWGY 169
SERLEKEI+EVQE+KKKISTMTADEYFEKHPELRKKFDDEIRNDYWGY
Sbjct: 121 SERLEKEIVEVQELKKKISTMTADEYFEKHPELRKKFDDEIRNDYWGY 168
BLAST of PI0003705 vs. ExPASy TrEMBL
Match: A0A5D3CDC0 (ATP synthase subunit d, mitochondrial OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold475G002870 PE=3 SV=1) HSP 1 Score: 316.6 bits (810), Expect = 6.2e-83 Identity = 160/168 (95.24%), Postives = 163/168 (97.02%), Query Frame = 0
Query: 1 MSGTVKKVTDVAFKASKNIDWDGMAKLLVSDEARKEFSSLRRAFEEVNSTLQTKFSQEPE 60
MSGTVKKVTDVAFKASKNIDWDGMAKLLVSDEARKEFSSLRRAFEEVNS LQTKFSQEPE
Sbjct: 1 MSGTVKKVTDVAFKASKNIDWDGMAKLLVSDEARKEFSSLRRAFEEVNSALQTKFSQEPE 60
Query: 61 PIDWEYYRKGIGSRLVDMYKEAYDGIEVPKFVDTVTPQYKPKFDALLVELKEAEAKSLKE 120
PIDWEYYRKGIGSRLVDMYKEAYD IE+PKFVDTVTPQYKPKFDALLVELKEAE KSLKE
Sbjct: 61 PIDWEYYRKGIGSRLVDMYKEAYDSIEIPKFVDTVTPQYKPKFDALLVELKEAEEKSLKE 120
Query: 121 SERLEKEILEVQEMKKKISTMTADEYFEKHPELRKKFDDEIRNDYWGY 169
SERLEKEI EV+EMK+KI TMTADEYFEKHPELRKKFDDEIRNDYWGY
Sbjct: 121 SERLEKEIAEVREMKQKICTMTADEYFEKHPELRKKFDDEIRNDYWGY 168
BLAST of PI0003705 vs. NCBI nr
Match: XP_004142418.1 (ATP synthase subunit d, mitochondrial [Cucumis sativus] >KGN52290.1 hypothetical protein Csa_007810 [Cucumis sativus]) HSP 1 Score: 323.6 bits (828), Expect = 1.0e-84 Identity = 163/168 (97.02%), Postives = 165/168 (98.21%), Query Frame = 0
Query: 1 MSGTVKKVTDVAFKASKNIDWDGMAKLLVSDEARKEFSSLRRAFEEVNSTLQTKFSQEPE 60
MSGT+KKVTDVAFKASKNIDWDGMAKLLVSDEARKEFSSLRRAFEEVNS LQTKFSQEPE
Sbjct: 1 MSGTIKKVTDVAFKASKNIDWDGMAKLLVSDEARKEFSSLRRAFEEVNSALQTKFSQEPE 60
Query: 61 PIDWEYYRKGIGSRLVDMYKEAYDGIEVPKFVDTVTPQYKPKFDALLVELKEAEAKSLKE 120
PIDWEYYRKGIGSRLVDMYKEAYDGIE+PKFVDTVTPQYKPKFDALLVELKEAEAKSLKE
Sbjct: 61 PIDWEYYRKGIGSRLVDMYKEAYDGIEIPKFVDTVTPQYKPKFDALLVELKEAEAKSLKE 120
Query: 121 SERLEKEILEVQEMKKKISTMTADEYFEKHPELRKKFDDEIRNDYWGY 169
SERLEKEI EVQEMKKKI TMTADEYFEKHPELRKKFDDEIRNDYWGY
Sbjct: 121 SERLEKEIAEVQEMKKKICTMTADEYFEKHPELRKKFDDEIRNDYWGY 168
BLAST of PI0003705 vs. NCBI nr
Match: XP_023541261.1 (ATP synthase subunit d, mitochondrial [Cucurbita pepo subsp. pepo]) HSP 1 Score: 323.6 bits (828), Expect = 1.0e-84 Identity = 164/168 (97.62%), Postives = 166/168 (98.81%), Query Frame = 0
Query: 1 MSGTVKKVTDVAFKASKNIDWDGMAKLLVSDEARKEFSSLRRAFEEVNSTLQTKFSQEPE 60
MSGTVKKVTDVAFKASKNIDWDGMAKLLVSDEARKEFSSLRRAFEEVNS+LQTKFSQEPE
Sbjct: 1 MSGTVKKVTDVAFKASKNIDWDGMAKLLVSDEARKEFSSLRRAFEEVNSSLQTKFSQEPE 60
Query: 61 PIDWEYYRKGIGSRLVDMYKEAYDGIEVPKFVDTVTPQYKPKFDALLVELKEAEAKSLKE 120
PIDWEYYRKGIGSRLVDMYKEAYD IEVPKFVDTVTPQYKPKFDALLVELKEAE KSLKE
Sbjct: 61 PIDWEYYRKGIGSRLVDMYKEAYDSIEVPKFVDTVTPQYKPKFDALLVELKEAEVKSLKE 120
Query: 121 SERLEKEILEVQEMKKKISTMTADEYFEKHPELRKKFDDEIRNDYWGY 169
SERLEKEI+EVQEMKKKISTMTADEYFEKHPELRKKFDDEIRNDYWGY
Sbjct: 121 SERLEKEIVEVQEMKKKISTMTADEYFEKHPELRKKFDDEIRNDYWGY 168
BLAST of PI0003705 vs. NCBI nr
Match: XP_022966719.1 (ATP synthase subunit d, mitochondrial [Cucurbita maxima]) HSP 1 Score: 322.4 bits (825), Expect = 2.3e-84 Identity = 163/168 (97.02%), Postives = 166/168 (98.81%), Query Frame = 0
Query: 1 MSGTVKKVTDVAFKASKNIDWDGMAKLLVSDEARKEFSSLRRAFEEVNSTLQTKFSQEPE 60
MSGTVKKVTDVAFKASKNIDWDGMAKLLVSDEARKEFSSLRRAFEEVNS+LQTKFSQEPE
Sbjct: 1 MSGTVKKVTDVAFKASKNIDWDGMAKLLVSDEARKEFSSLRRAFEEVNSSLQTKFSQEPE 60
Query: 61 PIDWEYYRKGIGSRLVDMYKEAYDGIEVPKFVDTVTPQYKPKFDALLVELKEAEAKSLKE 120
PIDWEYYRKGIGSRLVDMYKEAYD IEVPKFVDTVTPQYKPKFDALLVELKEAE KSLKE
Sbjct: 61 PIDWEYYRKGIGSRLVDMYKEAYDSIEVPKFVDTVTPQYKPKFDALLVELKEAEVKSLKE 120
Query: 121 SERLEKEILEVQEMKKKISTMTADEYFEKHPELRKKFDDEIRNDYWGY 169
SERLEKEI+EVQE+KKKISTMTADEYFEKHPELRKKFDDEIRNDYWGY
Sbjct: 121 SERLEKEIVEVQELKKKISTMTADEYFEKHPELRKKFDDEIRNDYWGY 168
BLAST of PI0003705 vs. NCBI nr
Match: XP_022945159.1 (ATP synthase subunit d, mitochondrial [Cucurbita moschata] >KAG6573823.1 ATP synthase subunit d, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia] >KAG7012890.1 ATP synthase subunit d, mitochondrial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 320.9 bits (821), Expect = 6.8e-84 Identity = 162/168 (96.43%), Postives = 165/168 (98.21%), Query Frame = 0
Query: 1 MSGTVKKVTDVAFKASKNIDWDGMAKLLVSDEARKEFSSLRRAFEEVNSTLQTKFSQEPE 60
MSGTVKKVTDVAFKASKNIDWDGMAKLLVSDEARKEFSSLRRAFEEVNS LQTKFSQEPE
Sbjct: 1 MSGTVKKVTDVAFKASKNIDWDGMAKLLVSDEARKEFSSLRRAFEEVNSALQTKFSQEPE 60
Query: 61 PIDWEYYRKGIGSRLVDMYKEAYDGIEVPKFVDTVTPQYKPKFDALLVELKEAEAKSLKE 120
PIDWEYYRKGIGSRLVDMYKEAYD IEVPKFVDTVTPQYKPKFD+LLVELKEAE KSLKE
Sbjct: 61 PIDWEYYRKGIGSRLVDMYKEAYDSIEVPKFVDTVTPQYKPKFDSLLVELKEAEVKSLKE 120
Query: 121 SERLEKEILEVQEMKKKISTMTADEYFEKHPELRKKFDDEIRNDYWGY 169
SERLEKEI+EVQE+KKKISTMTADEYFEKHPELRKKFDDEIRNDYWGY
Sbjct: 121 SERLEKEIVEVQELKKKISTMTADEYFEKHPELRKKFDDEIRNDYWGY 168
BLAST of PI0003705 vs. NCBI nr
Match: XP_022139222.1 (ATP synthase subunit d, mitochondrial [Momordica charantia]) HSP 1 Score: 320.9 bits (821), Expect = 6.8e-84 Identity = 161/168 (95.83%), Postives = 166/168 (98.81%), Query Frame = 0
Query: 1 MSGTVKKVTDVAFKASKNIDWDGMAKLLVSDEARKEFSSLRRAFEEVNSTLQTKFSQEPE 60
MSGTVKKV DVAFKASKNIDWDGMAKLLVSDEARKEF++LRRAF+EVNSTLQTKFSQEPE
Sbjct: 1 MSGTVKKVADVAFKASKNIDWDGMAKLLVSDEARKEFATLRRAFDEVNSTLQTKFSQEPE 60
Query: 61 PIDWEYYRKGIGSRLVDMYKEAYDGIEVPKFVDTVTPQYKPKFDALLVELKEAEAKSLKE 120
PIDWEYYRKGIGSRLVDMYKEAYD IEVPKFVDTVTPQYKPKFDALLVELKEAEAKSLKE
Sbjct: 61 PIDWEYYRKGIGSRLVDMYKEAYDSIEVPKFVDTVTPQYKPKFDALLVELKEAEAKSLKE 120
Query: 121 SERLEKEILEVQEMKKKISTMTADEYFEKHPELRKKFDDEIRNDYWGY 169
SERLEKE++EVQEMKKKISTMTADEYFEKHPELRKKFDDEIRNDYWGY
Sbjct: 121 SERLEKEVVEVQEMKKKISTMTADEYFEKHPELRKKFDDEIRNDYWGY 168
BLAST of PI0003705 vs. TAIR 10
Match: AT3G52300.1 (ATP synthase D chain, mitochondrial ) HSP 1 Score: 281.2 bits (718), Expect = 5.5e-76 Identity = 137/168 (81.55%), Postives = 155/168 (92.26%), Query Frame = 0
Query: 1 MSGTVKKVTDVAFKASKNIDWDGMAKLLVSDEARKEFSSLRRAFEEVNSTLQTKFSQEPE 60
MSG KK+ DVAFKAS+ IDWDGMAK+LV+DEAR+EFS+LRRAF+EVN+ LQTKFSQEPE
Sbjct: 1 MSGAGKKIADVAFKASRTIDWDGMAKVLVTDEARREFSNLRRAFDEVNTQLQTKFSQEPE 60
Query: 61 PIDWEYYRKGIGSRLVDMYKEAYDGIEVPKFVDTVTPQYKPKFDALLVELKEAEAKSLKE 120
PIDW+YYRKGIG+ +VD YKEAYD IE+PK+VD VTP+YKPKFDALLVELKEAE KSLKE
Sbjct: 61 PIDWDYYRKGIGAGIVDKYKEAYDSIEIPKYVDKVTPEYKPKFDALLVELKEAEQKSLKE 120
Query: 121 SERLEKEILEVQEMKKKISTMTADEYFEKHPELRKKFDDEIRNDYWGY 169
SERLEKEI +VQE+ KK+STMTADEYFEKHPEL+KKFDDEIRND WGY
Sbjct: 121 SERLEKEIADVQEISKKLSTMTADEYFEKHPELKKKFDDEIRNDNWGY 168
BLAST of PI0003705 vs. TAIR 10
Match: AT3G52300.2 (ATP synthase D chain, mitochondrial ) HSP 1 Score: 182.6 bits (462), Expect = 2.7e-46 Identity = 83/108 (76.85%), Postives = 99/108 (91.67%), Query Frame = 0
Query: 1 MSGTVKKVTDVAFKASKNIDWDGMAKLLVSDEARKEFSSLRRAFEEVNSTLQTKFSQEPE 60
MSG KK+ DVAFKAS+ IDWDGMAK+LV+DEAR+EFS+LRRAF+EVN+ LQTKFSQEPE
Sbjct: 1 MSGAGKKIADVAFKASRTIDWDGMAKVLVTDEARREFSNLRRAFDEVNTQLQTKFSQEPE 60
Query: 61 PIDWEYYRKGIGSRLVDMYKEAYDGIEVPKFVDTVTPQYKPKFDALLV 109
PIDW+YYRKGIG+ +VD YKEAYD IE+PK+VD VTP+YKPKFDAL++
Sbjct: 61 PIDWDYYRKGIGAGIVDKYKEAYDSIEIPKYVDKVTPEYKPKFDALVI 108
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| Q9FT52 | 7.8e-75 | 81.55 | ATP synthase subunit d, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At3g523... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| A0A0A0KRL4 | 5.0e-85 | 97.02 | ATP synthase subunit d, mitochondrial OS=Cucumis sativus OX=3659 GN=Csa_5G623540... | [more] |
| A0A6J1HUL8 | 1.1e-84 | 97.02 | ATP synthase subunit d, mitochondrial OS=Cucurbita maxima OX=3661 GN=LOC11146634... | [more] |
| A0A6J1CDD8 | 3.3e-84 | 95.83 | ATP synthase subunit d, mitochondrial OS=Momordica charantia OX=3673 GN=LOC11101... | [more] |
| A0A6J1G072 | 3.3e-84 | 96.43 | ATP synthase subunit d, mitochondrial OS=Cucurbita moschata OX=3662 GN=LOC111449... | [more] |
| A0A5D3CDC0 | 6.2e-83 | 95.24 | ATP synthase subunit d, mitochondrial OS=Cucumis melo var. makuwa OX=1194695 GN=... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| XP_004142418.1 | 1.0e-84 | 97.02 | ATP synthase subunit d, mitochondrial [Cucumis sativus] >KGN52290.1 hypothetical... | [more] |
| XP_023541261.1 | 1.0e-84 | 97.62 | ATP synthase subunit d, mitochondrial [Cucurbita pepo subsp. pepo] | [more] |
| XP_022966719.1 | 2.3e-84 | 97.02 | ATP synthase subunit d, mitochondrial [Cucurbita maxima] | [more] |
| XP_022945159.1 | 6.8e-84 | 96.43 | ATP synthase subunit d, mitochondrial [Cucurbita moschata] >KAG6573823.1 ATP syn... | [more] |
| XP_022139222.1 | 6.8e-84 | 95.83 | ATP synthase subunit d, mitochondrial [Momordica charantia] | [more] |
InterPro
Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| None | No IPR available | COILS | Coil | Coil | coord: 107..144 |
| None | No IPR available | PANTHER | PTHR12700:SF18 | ATP SYNTHASE SUBUNIT D, MITOCHONDRIAL | coord: 1..168 |
| IPR008689 | ATP synthase, F0 complex, subunit D, mitochondrial | PFAM | PF05873 | Mt_ATP-synt_D | coord: 15..166
e-value: 1.3E-18
score: 67.4 |
| IPR008689 | ATP synthase, F0 complex, subunit D, mitochondrial | PIRSF | PIRSF005514 | Mitoh_ATP-synt_D | coord: 9..168
e-value: 2.3E-39
score: 132.7 |
| IPR008689 | ATP synthase, F0 complex, subunit D, mitochondrial | PANTHER | PTHR12700 | ATP SYNTHASE SUBUNIT D, MITOCHONDRIAL | coord: 1..168 |
| IPR036228 | ATP synthase, F0 complex, subunit D superfamily, mitochondrial | GENE3D | 6.10.280.70 | | coord: 14..133
e-value: 6.4E-35
score: 121.8 |
| IPR036228 | ATP synthase, F0 complex, subunit D superfamily, mitochondrial | SUPERFAMILY | 161065 | ATP synthase D chain-like | coord: 15..130 |
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| biological_process |
GO:0015986 |
ATP synthesis coupled proton transport |
| cellular_component |
GO:0000274 |
mitochondrial proton-transporting ATP synthase, stator stalk |
| cellular_component |
GO:0000276 |
mitochondrial proton-transporting ATP synthase complex, coupling factor F(o) |
| molecular_function |
GO:0016787 |
hydrolase activity |
| molecular_function |
GO:0015078 |
proton transmembrane transporter activity |
|
