Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGTGACAGTGAACAACCATTCGAACTCGACCTTGAAATTGAGCGAACATTTCGGGGTAATCGACGAAGAGCAAGGCAGAGACAAGTTCGCAGGATGGAAAATAACAACAGAAATGCCCTTCCGCCGCAAGCTCACCCAGAACCGAACGCCGCCTATATAGCACATGACTTGGATAGGCCGATTAGATCTTATGCGGCGCCCAACCTTTATAACTTCAACCCAGGAATCGCCTACCCTGTATTCGGCGAGAACGCAAGGTTTGAAATCAAACCTGTTATGCTTCAAATGATTCAGAACGTCGGACAATTCGGCGGACATCCTGGGGAAGATCCACACAAACATATAAGGAGTTTCTACTCCATCTGCGCTTCCTTCCATATGCCAGGCATCTCACCTGAAGAATTAAGATTCACCCTCTTCCCGTTAACTCTGAGGGATGAGGCGAAGAGGTGGGCGAATGCCCTGAAAGATGGCGAGGTGGGAACATGGGATCAATTAATAGAAAAATTTATGAAGAAATTTTTCCCACCTCACGAAAATGCTAGAAGGAAGGAGCTTATGAGCTTCCAGCAGAAGGATAGAGAAAACCTACATGACACGTGGAGTAGGTTCAAACGGATGGTCAAAGCATGCCCCTACAATGGCATTCCTAAATGCATACTGATGGAGGTTTTCTATTTTGGACTAAACAAGGCTACACAGCAGACTGCTGATGCTGTGTTTGTAGACGGTATGCTGAAAAGTACATACAACCAGATTAAGACGACGCTGGACACGATGGCCAACAACAATGAAGAGTGGGATGAAGATGATTTCGGCAATCGCCGAGGAGGACGAGCAAAAGAGGATGGCATGGATAAGAGCGCCGTGGTGGCATTGTAG
mRNA sequence
ATGAGTGACAGTGAACAACCATTCGAACTCGACCTTGAAATTGAGCGAACATTTCGGGGTAATCGACGAAGAGCAAGGCAGAGACAAGTTCGCAGGATGGAAAATAACAACAGAAATGCCCTTCCGCCGCAAGCTCACCCAGAACCGAACGCCGCCTATATAGCACATGACTTGGATAGGCCGATTAGATCTTATGCGGCGCCCAACCTTTATAACTTCAACCCAGGAATCGCCTACCCTGTATTCGGCGAGAACGCAAGGTTTGAAATCAAACCTGTTATGCTTCAAATGATTCAGAACGTCGGACAATTCGGCGGACATCCTGGGGAAGATCCACACAAACATATAAGGAGTTTCTACTCCATCTGCGCTTCCTTCCATATGCCAGGCATCTCACCTGAAGAATTAAGATTCACCCTCTTCCCGTTAACTCTGAGGGATGAGGCGAAGAGGTGGGCGAATGCCCTGAAAGATGGCGAGGTGGGAACATGGGATCAATTAATAGAAAAATTTATGAAGAAATTTTTCCCACCTCACGAAAATGCTAGAAGGAAGGAGCTTATGAGCTTCCAGCAGAAGGATAGAGAAAACCTACATGACACGTGGAGTAGGTTCAAACGGATGGTCAAAGCATGCCCCTACAATGGCATTCCTAAATGCATACTGATGGAGGTTTTCTATTTTGGACTAAACAAGGCTACACAGCAGACTGCTGATGCTGTGTTTGTAGACGGTATGCTGAAAAGTACATACAACCAGATTAAGACGACGCTGGACACGATGGCCAACAACAATGAAGAGTGGGATGAAGATGATTTCGGCAATCGCCGAGGAGGACGAGCAAAAGAGGATGGCATGGATAAGAGCGCCGTGGTGGCATTGTAG
Coding sequence (CDS)
ATGAGTGACAGTGAACAACCATTCGAACTCGACCTTGAAATTGAGCGAACATTTCGGGGTAATCGACGAAGAGCAAGGCAGAGACAAGTTCGCAGGATGGAAAATAACAACAGAAATGCCCTTCCGCCGCAAGCTCACCCAGAACCGAACGCCGCCTATATAGCACATGACTTGGATAGGCCGATTAGATCTTATGCGGCGCCCAACCTTTATAACTTCAACCCAGGAATCGCCTACCCTGTATTCGGCGAGAACGCAAGGTTTGAAATCAAACCTGTTATGCTTCAAATGATTCAGAACGTCGGACAATTCGGCGGACATCCTGGGGAAGATCCACACAAACATATAAGGAGTTTCTACTCCATCTGCGCTTCCTTCCATATGCCAGGCATCTCACCTGAAGAATTAAGATTCACCCTCTTCCCGTTAACTCTGAGGGATGAGGCGAAGAGGTGGGCGAATGCCCTGAAAGATGGCGAGGTGGGAACATGGGATCAATTAATAGAAAAATTTATGAAGAAATTTTTCCCACCTCACGAAAATGCTAGAAGGAAGGAGCTTATGAGCTTCCAGCAGAAGGATAGAGAAAACCTACATGACACGTGGAGTAGGTTCAAACGGATGGTCAAAGCATGCCCCTACAATGGCATTCCTAAATGCATACTGATGGAGGTTTTCTATTTTGGACTAAACAAGGCTACACAGCAGACTGCTGATGCTGTGTTTGTAGACGGTATGCTGAAAAGTACATACAACCAGATTAAGACGACGCTGGACACGATGGCCAACAACAATGAAGAGTGGGATGAAGATGATTTCGGCAATCGCCGAGGAGGACGAGCAAAAGAGGATGGCATGGATAAGAGCGCCGTGGTGGCATTGTAG
Protein sequence
MSDSEQPFELDLEIERTFRGNRRRARQRQVRRMENNNRNALPPQAHPEPNAAYIAHDLDRPIRSYAAPNLYNFNPGIAYPVFGENARFEIKPVMLQMIQNVGQFGGHPGEDPHKHIRSFYSICASFHMPGISPEELRFTLFPLTLRDEAKRWANALKDGEVGTWDQLIEKFMKKFFPPHENARRKELMSFQQKDRENLHDTWSRFKRMVKACPYNGIPKCILMEVFYFGLNKATQQTADAVFVDGMLKSTYNQIKTTLDTMANNNEEWDEDDFGNRRGGRAKEDGMDKSAVVAL
Homology
BLAST of PI0003495 vs. ExPASy TrEMBL
Match:
U5CUI2 (Retrotrans_gag domain-containing protein OS=Amborella trichopoda OX=13333 GN=AMTR_s04947p00003620 PE=4 SV=1)
HSP 1 Score: 221.5 bits (563), Expect = 4.7e-54
Identity = 106/220 (48.18%), Postives = 139/220 (63.18%), Query Frame = 0
Query: 50 NAAYIAHDLDRPIRSYAAPNLYNFNPGIAYPVFGENARFEIKPVMLQMIQNVGQFGGHPG 109
N +A D R IR YAAP NPGI P + +FE+KPVM QM+Q VGQF G P
Sbjct: 11 NPIILADDRARAIREYAAPMFNELNPGIVRPEI-QAPQFELKPVMFQMLQTVGQFSGMPT 70
Query: 110 EDPHKHIRSFYSICASFHMPGISPEELRFTLFPLTLRDEAKRWANALKDGEVGTWDQLIE 169
EDPH H+RSF + SF + G+S E LR LFP +LRD A+ W N L V W+ L E
Sbjct: 71 EDPHLHLRSFLEVSDSFKIQGVSEEVLRLKLFPFSLRDRARSWLNTLPPDSVTNWNDLAE 130
Query: 170 KFMKKFFPPHENAR-RKELMSFQQKDRENLHDTWSRFKRMVKACPYNGIPKCILMEVFYF 229
KF++K+FPP NA+ R E+MSFQQ + E+ D W RFK +++ CP++GIP CI ME FY
Sbjct: 131 KFLRKYFPPTRNAKFRSEIMSFQQLEDESTSDAWERFKELLRKCPHHGIPHCIQMETFYN 190
Query: 230 GLNKATQQTADAVFVDGMLKSTYNQIKTTLDTMANNNEEW 269
GLN A++ DA +L +YN+ L+T+A+NN +W
Sbjct: 191 GLNAASRMVLDASANGAILSKSYNEAFEILETIASNNYQW 229
BLAST of PI0003495 vs. ExPASy TrEMBL
Match:
A0A6J1H7E4 (uncharacterized protein LOC111461168 OS=Cucurbita moschata OX=3662 GN=LOC111461168 PE=4 SV=1)
HSP 1 Score: 213.8 bits (543), Expect = 9.8e-52
Identity = 102/220 (46.36%), Postives = 139/220 (63.18%), Query Frame = 0
Query: 50 NAAYIAHDLDRPIRSYAAPNLYNFNPGIAYPVFGENARFEIKPVMLQMIQNVGQFGGHPG 109
NA +A D +R IR+YA P + NP I P + FE+KPVM QM+Q +GQF G P
Sbjct: 31 NAIQLADDRERAIRAYAHPAVDELNPCIIRPEM-QATTFELKPVMFQMLQTIGQFHGLPS 90
Query: 110 EDPHKHIRSFYSICASFHMPGISPEELRFTLFPLTLRDEAKRWANALKDGEVGTWDQLIE 169
EDPH H++SF + SF G+ + +R +LFP +LRD AK W N L + +W+ L E
Sbjct: 91 EDPHLHLKSFLGVSDSFRFQGVDKDVIRLSLFPYSLRDGAKSWLNTLAPRTIDSWNSLAE 150
Query: 170 KFMKKFFPPHENAR-RKELMSFQQKDRENLHDTWSRFKRMVKACPYNGIPKCILMEVFYF 229
KF+ K+FPP NAR R E+++FQQ + E L + W RFK M++ CP++G+P CI ME FY
Sbjct: 151 KFLIKYFPPTRNARFRNEIVAFQQFEDETLSEAWERFKEMLRKCPHHGLPHCIQMETFYN 210
Query: 230 GLNKATQQTADAVFVDGMLKSTYNQIKTTLDTMANNNEEW 269
GLN AT+Q DA ML TYN+ L+ +A+NN +W
Sbjct: 211 GLNIATKQVVDASANGAMLSKTYNEAYEILERIASNNCQW 249
BLAST of PI0003495 vs. ExPASy TrEMBL
Match:
A0A6J1EEI2 (uncharacterized protein LOC111433394 OS=Cucurbita moschata OX=3662 GN=LOC111433394 PE=4 SV=1)
HSP 1 Score: 209.5 bits (532), Expect = 1.9e-50
Identity = 107/264 (40.53%), Postives = 151/264 (57.20%), Query Frame = 0
Query: 6 QPFELDLEIERTFRGNRRRARQRQVRRMENNNRNALPPQAHPEPNAAYIAHDLDRPIRSY 65
Q EL ++ R F A Q ++ NA ++A D +R IR+Y
Sbjct: 13 QQIELGAQLNREFENPAMMANQERI-----------------TANAIHLADDRERAIRAY 72
Query: 66 AAPNLYNFNPGIAYPVFGENARFEIKPVMLQMIQNVGQFGGHPGEDPHKHIRSFYSICAS 125
A P + NP I P + FE+KPVM QM+Q +GQF G P EDPH H++SF + S
Sbjct: 73 AHPAVEELNPCIIRPEM-QATTFELKPVMFQMLQTIGQFHGLPSEDPHLHLKSFLGVSDS 132
Query: 126 FHMPGISPEELRFTLFPLTLRDEAKRWANALKDGEVGTWDQLIEKFMKKFFPPHENAR-R 185
F + + +R +LFP +LRD AK W N L G + +W+ L+EKF+ K+FPP NAR R
Sbjct: 133 FRFQRVDKDVIRLSLFPYSLRDGAKSWLNTLALGTIDSWNSLVEKFLIKYFPPTRNARFR 192
Query: 186 KELMSFQQKDRENLHDTWSRFKRMVKACPYNGIPKCILMEVFYFGLNKATQQTADAVFVD 245
E++ FQQ + + L + W RFK M++ CP++G+P CI ME FY GLN AT+Q DA
Sbjct: 193 NEIVVFQQFEDDTLSEAWERFKEMLRKCPHHGLPHCIQMETFYNGLNIATKQVVDASANG 252
Query: 246 GMLKSTYNQIKTTLDTMANNNEEW 269
+L TYN+ L+ +A+NN +W
Sbjct: 253 AILSKTYNEAYEILERIASNNCQW 258
BLAST of PI0003495 vs. ExPASy TrEMBL
Match:
A0A5A7V1F3 (Retrotrans_gag domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold89G002850 PE=4 SV=1)
HSP 1 Score: 201.8 bits (512), Expect = 3.9e-48
Identity = 105/216 (48.61%), Postives = 137/216 (63.43%), Query Frame = 0
Query: 53 YIAHDLDRPIRSYAAPNLYNFNPGIAYPVFGENARFEIKPVMLQMIQNVGQFGGHPGEDP 112
Y+AH+L RPIRSYA P+LY FNPGIAYP FGENA +E K
Sbjct: 17 YLAHNLHRPIRSYALPSLYEFNPGIAYPEFGENAHYESK--------------------- 76
Query: 113 HKHIRSFYSICASFHMPGISPEELRFTLFPLTLRDEAKRWANALKDGEVGTWDQLIEKFM 172
D+AKRWAN+++ GEV TW+ LIEKFM
Sbjct: 77 ----------------------------------DDAKRWANSMEHGEVTTWEDLIEKFM 136
Query: 173 KKFFPPHENA-RRKELMSFQQKDRENLHDTWSRFKRMVKACPYNGIPKCILMEVFYFGLN 232
KKFFP + A RR++L+ F+Q+DR+NLHD WS FKRMVKAC ++GI K +LME FYFGL+
Sbjct: 137 KKFFPTIKIAKRRQDLILFKQRDRKNLHDAWSIFKRMVKACLHHGITKYVLMEGFYFGLS 177
Query: 233 KATQQTADAVFVDGMLKSTYNQIKTTLDTMANNNEE 268
K T+Q+AD++F+ G+L+S+YNQIK LD+MANN+++
Sbjct: 197 KDTRQSADSLFIGGILRSSYNQIKAMLDSMANNSQD 177
BLAST of PI0003495 vs. ExPASy TrEMBL
Match:
A0A6J1EQ90 (uncharacterized protein LOC111436411 OS=Cucurbita moschata OX=3662 GN=LOC111436411 PE=4 SV=1)
HSP 1 Score: 200.7 bits (509), Expect = 8.6e-48
Identity = 113/283 (39.93%), Postives = 159/283 (56.18%), Query Frame = 0
Query: 8 FELDLEIERTFRGNRRRARQRQVRRMENNNRNALPPQAHPE--------------PNAAY 67
F LD EIERTF RRR ++++ +N + L Q + E N +
Sbjct: 9 FILDPEIERTF---RRRLKKKKKMTEQNIQQIELGAQLNREFENPAMMANQERITANPIH 68
Query: 68 IAHDLDRPIRSYAAPNLYNFNPGIAYPVFGENARFEIKPVMLQMIQNVGQFGGHPGEDPH 127
+A D +R IR+YA P + NP I P + FE+KPVM QM+Q +GQF G P EDPH
Sbjct: 69 LADDRERAIRAYAHPAVEELNPCIIRPEI-QGTTFELKPVMFQMLQTIGQFHGLPLEDPH 128
Query: 128 KHIRSFYSI-------CASFHMPGISPEELRFTLFPLTLRDEAKRWANALKDGEVGTWDQ 187
H++SF + SF G+ + +R +LFP LRD AK W N L G + +W+
Sbjct: 129 LHLKSFLGVSDSFRFHSDSFRFQGVDKDMIRLSLFPYLLRDGAKSWLNTLAPGTIDSWNS 188
Query: 188 LIEKFMKKFFPPHENAR-RKELMSFQQKDRENLHDTWSRFKRMVKACPYNGIPKCILMEV 247
L E F+ K+FPP NAR + E+++FQQ + E L + RFK M++ CP++G+P CI ME
Sbjct: 189 LAENFLIKYFPPTRNARFKNEIVTFQQFEDETLSEACERFKEMLRKCPHHGLPHCIQMET 248
Query: 248 FYFGLNKATQQTADAVFVDGMLKSTYNQIKTTLDTMANNNEEW 269
FY GLN T+Q DA +L TYN+ L+ +A+NN +W
Sbjct: 249 FYNGLNIVTKQVVDASANGAILSKTYNEAYEILERIASNNCQW 287
BLAST of PI0003495 vs. NCBI nr
Match:
WP_217833177.1 (retrotransposon gag domain-containing protein, partial [Synechococcus sp. PCC 7002])
HSP 1 Score: 277.7 bits (709), Expect = 1.1e-70
Identity = 136/286 (47.55%), Postives = 189/286 (66.08%), Query Frame = 0
Query: 1 MSDSEQP-FELDLEIERTFRGNRRRARQRQVRRMENNNRNA-----LPPQAHPEPNA--- 60
MS+ + P F++D EIERTFR R+ +QR+ + N +A PQA NA
Sbjct: 2 MSEGDNPTFDIDPEIERTFRRRIRQIKQRRSNQTIEENMDAQYNQPQAPQAGVRQNANAQ 61
Query: 61 ---------AYIAHDLDRPIRSYAAPNLYNFNPGIAYPVFGENARFEIKPVMLQMIQNVG 120
+AHD +RP+R YA+PNLYNF PGI P F N RFE+KPVMLQM+Q G
Sbjct: 62 EHANYDTNPIVLAHDRNRPMREYASPNLYNFAPGILQPTFEGNGRFEMKPVMLQMLQAAG 121
Query: 121 QFGGHPGEDPHKHIRSFYSICASFHMPGISPEELRFTLFPLTLRDEAKRWANALKDGEVG 180
QFGG GEDPH H++SF IC++F M G+ + +R TLFP +LRDEA++WA + + GE+
Sbjct: 122 QFGGATGEDPHAHLKSFLEICSAFPMAGVPQDSIRLTLFPFSLRDEARQWAYSFEPGEIT 181
Query: 181 TWDQLIEKFMKKFFPPHENA-RRKELMSFQQKDRENLHDTWSRFKRMVKACPYNGIPKCI 240
TW +++EKFM+K+FPP +A RR+++++F+QKD E + W+RFKR+V+ CP+NGIP C+
Sbjct: 182 TWGKMVEKFMQKYFPPTVSAKRRRDIVTFEQKDSETFSEAWTRFKRLVRNCPHNGIPNCV 241
Query: 241 LMEVFYFGLNKATQQTADAVFVDGMLKSTYNQIKTTLDTMANNNEE 268
ME+FY GLNK +Q ADA G++ TY Q K LD ++ N +
Sbjct: 242 QMEIFYGGLNKTSQSMADASAAGGLMDKTYTQAKEILDRISRNTNQ 287
BLAST of PI0003495 vs. NCBI nr
Match:
XP_038887458.1 (uncharacterized protein LOC120077591 [Benincasa hispida])
HSP 1 Score: 256.9 bits (655), Expect = 2.1e-64
Identity = 133/289 (46.02%), Postives = 193/289 (66.78%), Query Frame = 0
Query: 4 SEQPFELDLEIERTF--RGNRRRARQRQVRRMENNNRNALPPQAH-----PEPNAAYIAH 63
++ FE + EI+ TF R ++ RA +R++ +NNN A P+ + P + ++A
Sbjct: 5 TDPEFEANPEIDHTFRTRAHQNRAWRRRINMADNNNNEA--PEGNQGVNRPVQDPVFLAA 64
Query: 64 DLDRPIRSYAAPNLYNFNPGIAYPVFGENARFEIKPVMLQMIQNVGQFGGHPGEDPHKHI 123
D + PIR+YAAPNLY+F+PGI+ P+ ENARFEIKPVM+QMIQN+ QF E+PH H+
Sbjct: 65 DHNIPIRNYAAPNLYDFSPGISRPIVEENARFEIKPVMVQMIQNMRQFESLQCENPHAHL 124
Query: 124 RSFYSICASFHMPGISPEELRFTLFPLTLRDEAKRWANALKDGEVGTWDQLIEKFMKKFF 183
F +C++F +PGI+P +R LFP TLRD+AKRWA++L+ E+ + DQL+E FMKKFF
Sbjct: 125 TIFVEMCSTFSIPGITPVGIRLYLFPYTLRDKAKRWAHSLEANEITSSDQLVEWFMKKFF 184
Query: 184 PPHENA-RRKELMSFQQKDRENLHDTWSRFKRMVKACPYNGIPKCILMEVFYFGLNKATQ 243
PP N RRK +++F++ D E L W RF+R+VK CP+ GI C+LME+FY GLN++TQ
Sbjct: 185 PPAINTRRRKNVLNFEKMDNETLSTAWVRFRRLVKNCPHIGILDCVLMEMFYNGLNRSTQ 244
Query: 244 QTADAVFVDGMLKSTYNQIKTTLDTMANNNEEWDEDDFGNRRGGRAKED 285
ADA V+ + TY + K LD ++ N ++W +D + R R + D
Sbjct: 245 AVADASAVERFMDKTYTKAKVILDRISWNMDDWVDDGYRGRGSERRRND 291
BLAST of PI0003495 vs. NCBI nr
Match:
XP_017233063.1 (PREDICTED: uncharacterized protein LOC108207110 [Daucus carota subsp. sativus])
HSP 1 Score: 233.4 bits (594), Expect = 2.5e-57
Identity = 123/266 (46.24%), Postives = 162/266 (60.90%), Query Frame = 0
Query: 8 FELDLEIERTFRGNRRRARQRQVRR----MENNNRNALPPQAHPEPNAAYIAHDLDRPIR 67
F D EIERTF NRRR QR++++ M++N N P P A+I D DR IR
Sbjct: 9 FAFDPEIERTF--NRRRKAQRKIKQTQVAMDDNVNNGDIPIV---PRGAFIVDDKDRAIR 68
Query: 68 SYAAPNLYNFNPGIAYPVFGENARFEIKPVMLQMIQNVGQFGGHPGEDPHKHIRSFYSIC 127
YAAP N GI P + +FE+KPVM QM+Q +GQF G P EDPH H+R F I
Sbjct: 69 QYAAPRFEELNSGIIRPNI-QATQFELKPVMFQMLQTIGQFSGMPTEDPHLHLRLFMEIS 128
Query: 128 ASFHMPGISPEELRFTLFPLTLRDEAKRWANALKDGEVGTWDQLIEKFMKKFFPPHENAR 187
SF G+ + LR LFP ++RD A+ W N+L G V TW+ L EKF+ K+FPP+ NA+
Sbjct: 129 DSFKFQGVPEDALRLKLFPYSVRDRARTWLNSLPAGSVTTWNDLTEKFLSKYFPPNMNAK 188
Query: 188 -RKELMSFQQKDRENLHDTWSRFKRMVKACPYNGIPKCILMEVFYFGLNKATQQTADAVF 247
R E+ SFQQ+D E+L+D W RFK +++ CP++GI CI ME FY GLN T+ DA
Sbjct: 189 LRNEINSFQQQDDESLYDAWERFKELLRKCPHHGILHCIQMETFYNGLNAQTKMVVDASA 248
Query: 248 VDGMLKSTYNQIKTTLDTMANNNEEW 269
+L +YNQ L+T+A N +W
Sbjct: 249 NGALLSKSYNQAYEILETIATKNYQW 268
BLAST of PI0003495 vs. NCBI nr
Match:
XP_030508936.1 (uncharacterized protein LOC115723589 [Cannabis sativa])
HSP 1 Score: 231.5 bits (589), Expect = 9.4e-57
Identity = 122/272 (44.85%), Postives = 162/272 (59.56%), Query Frame = 0
Query: 1 MSDSEQPFEL---DLEIERTFRGNRRRARQRQVRRMENNNRNALPPQAHPEPNAAYIAHD 60
M++ E+ EL D EIERTF R+R ++++ ++ N H E N +A D
Sbjct: 1 MNEQEEDLELAPIDPEIERTF---RQRRKEQKAKKRCNMADGFEVGGVHNEANPIALADD 60
Query: 61 LDRPIRSYAAPNLYNFNPGIAYPVFGENARFEIKPVMLQMIQNVGQFGGHPGEDPHKHIR 120
R IR YAAP NPGI P + FE+KPVM QM+Q VGQFGG P EDPH HIR
Sbjct: 61 RARAIREYAAPMFNELNPGIVRPEI-QAPHFELKPVMFQMLQTVGQFGGSPTEDPHLHIR 120
Query: 121 SFYSICASFHMPGISPEELRFTLFPLTLRDEAKRWANALKDGEVGTWDQLIEKFMKKFFP 180
SF + SF + G+S E LR LFP +LRD A+ W N L V W+ L EKF++K+FP
Sbjct: 121 SFLEVSDSFKLQGVSEEALRLKLFPFSLRDRARAWLNTLPPDSVTNWNDLAEKFLRKYFP 180
Query: 181 PHENAR-RKELMSFQQKDRENLHDTWSRFKRMVKACPYNGIPKCILMEVFYFGLNKATQQ 240
P NA+ R E+MSFQQ + E D W RFK +++ CP++GIP CI +E FY GLN A +
Sbjct: 181 PTRNAKFRSEIMSFQQLEDETTSDAWERFKELLRKCPHHGIPHCIQLETFYNGLNAAARM 240
Query: 241 TADAVFVDGMLKSTYNQIKTTLDTMANNNEEW 269
DA +L +YN+ L+ +A+NN +W
Sbjct: 241 VLDAFANGAILSKSYNEAFEILERIASNNYQW 268
BLAST of PI0003495 vs. NCBI nr
Match:
XP_030497803.1 (uncharacterized protein LOC115713460 [Cannabis sativa])
HSP 1 Score: 226.9 bits (577), Expect = 2.3e-55
Identity = 109/225 (48.44%), Postives = 140/225 (62.22%), Query Frame = 0
Query: 45 AHPEPNAAYIAHDLDRPIRSYAAPNLYNFNPGIAYPVFGENARFEIKPVMLQMIQNVGQF 104
AH E N +A D R IR YAAP NPGI P + FE+KPVM QM+Q VGQF
Sbjct: 10 AHNEANPIALADDRTRAIREYAAPMFNELNPGIVRPEI-QAPHFELKPVMFQMLQTVGQF 69
Query: 105 GGHPGEDPHKHIRSFYSICASFHMPGISPEELRFTLFPLTLRDEAKRWANALKDGEVGTW 164
GG P EDPH HIRSF + SF + G+S E LR LFP +LRD A+ W N L V W
Sbjct: 70 GGSPTEDPHLHIRSFLEVSDSFKLQGVSEEALRLKLFPFSLRDRARAWLNTLPPDSVTNW 129
Query: 165 DQLIEKFMKKFFPPHENAR-RKELMSFQQKDRENLHDTWSRFKRMVKACPYNGIPKCILM 224
+ L EKF++K+FPP NA+ R E+MSFQQ + E D W RFK +++ CP++GIP CI +
Sbjct: 130 NDLAEKFLRKYFPPTRNAKFRSEIMSFQQSEDETTSDAWERFKELLRKCPHHGIPHCIQL 189
Query: 225 EVFYFGLNKATQQTADAVFVDGMLKSTYNQIKTTLDTMANNNEEW 269
E FY GLN A++ DA +L +YN+ L+ +A+NN +W
Sbjct: 190 ETFYNGLNAASRMVLDASANGAILSKSYNEAFEILERIASNNYQW 233
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
U5CUI2 | 4.7e-54 | 48.18 | Retrotrans_gag domain-containing protein OS=Amborella trichopoda OX=13333 GN=AMT... | [more] |
A0A6J1H7E4 | 9.8e-52 | 46.36 | uncharacterized protein LOC111461168 OS=Cucurbita moschata OX=3662 GN=LOC1114611... | [more] |
A0A6J1EEI2 | 1.9e-50 | 40.53 | uncharacterized protein LOC111433394 OS=Cucurbita moschata OX=3662 GN=LOC1114333... | [more] |
A0A5A7V1F3 | 3.9e-48 | 48.61 | Retrotrans_gag domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 ... | [more] |
A0A6J1EQ90 | 8.6e-48 | 39.93 | uncharacterized protein LOC111436411 OS=Cucurbita moschata OX=3662 GN=LOC1114364... | [more] |
Match Name | E-value | Identity | Description | |
WP_217833177.1 | 1.1e-70 | 47.55 | retrotransposon gag domain-containing protein, partial [Synechococcus sp. PCC 70... | [more] |
XP_038887458.1 | 2.1e-64 | 46.02 | uncharacterized protein LOC120077591 [Benincasa hispida] | [more] |
XP_017233063.1 | 2.5e-57 | 46.24 | PREDICTED: uncharacterized protein LOC108207110 [Daucus carota subsp. sativus] | [more] |
XP_030508936.1 | 9.4e-57 | 44.85 | uncharacterized protein LOC115723589 [Cannabis sativa] | [more] |
XP_030497803.1 | 2.3e-55 | 48.44 | uncharacterized protein LOC115713460 [Cannabis sativa] | [more] |
Match Name | E-value | Identity | Description | |