PI0003435 (gene) Melon (PI 482460) v1

Overview


Name	PI0003435
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	Retrovirus-related Pol polyprotein from transposon opus
Location	chr09: 9213451 .. 9213834 (+)
RNA-Seq Expression	PI0003435
Synteny	PI0003435

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTGATCTTCTCAGATTTCCTGGAGAGATCAGTGGAAATCTTCATGGATGACTATTCTGTCTTTGGCGAGTCATTCAAACAATATTTGAGAAGTTTAGAAGAAGTTTTAGAGAAATGTGAAGAGACACATCTCGTTTTGAACTGGGAGAAGTGTCACTTCATGGTTAATGAAGGAATTGTGCTTGGACAAGAGATCTCCATTGCAGGGTTAGAAGTGGACCCCGCGAAGATTGATGTGGTTAGCAAGTTGCCACCGCCAAATGATATCAAACCTTTGAGAAGCTTCTTAGGCCATGCTGGGTTTTATAGGAGATTCATTAAGGGATTTTCTCAAATTGCGAAGCCACTTAGTAACTTACTATGTACTAATGAACTTTACTAG

mRNA sequence

ATGGTGATCTTCTCAGATTTCCTGGAGAGATCAGTGGAAATCTTCATGGATGACTATTCTGTCTTTGGCGAGTCATTCAAACAATATTTGAGAAGTTTAGAAGAAGTTTTAGAGAAATGTGAAGAGACACATCTCGTTTTGAACTGGGAGAAGTGTCACTTCATGGTTAATGAAGGAATTGTGCTTGGACAAGAGATCTCCATTGCAGGGTTAGAAGTGGACCCCGCGAAGATTGATGTGGTTAGCAAGTTGCCACCGCCAAATGATATCAAACCTTTGAGAAGCTTCTTAGGCCATGCTGGGTTTTATAGGAGATTCATTAAGGGATTTTCTCAAATTGCGAAGCCACTTAGTAACTTACTATGTACTAATGAACTTTACTAG

Coding sequence (CDS)

ATGGTGATCTTCTCAGATTTCCTGGAGAGATCAGTGGAAATCTTCATGGATGACTATTCTGTCTTTGGCGAGTCATTCAAACAATATTTGAGAAGTTTAGAAGAAGTTTTAGAGAAATGTGAAGAGACACATCTCGTTTTGAACTGGGAGAAGTGTCACTTCATGGTTAATGAAGGAATTGTGCTTGGACAAGAGATCTCCATTGCAGGGTTAGAAGTGGACCCCGCGAAGATTGATGTGGTTAGCAAGTTGCCACCGCCAAATGATATCAAACCTTTGAGAAGCTTCTTAGGCCATGCTGGGTTTTATAGGAGATTCATTAAGGGATTTTCTCAAATTGCGAAGCCACTTAGTAACTTACTATGTACTAATGAACTTTACTAG

Protein sequence

MVIFSDFLERSVEIFMDDYSVFGESFKQYLRSLEEVLEKCEETHLVLNWEKCHFMVNEGIVLGQEISIAGLEVDPAKIDVVSKLPPPNDIKPLRSFLGHAGFYRRFIKGFSQIAKPLSNLLCTNELY

Homology

[Close]

BLAST of PI0003435 vs. ExPASy Swiss-Prot
Match: Q8I7P9 (Retrovirus-related Pol polyprotein from transposon opus OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1)

HSP 1 Score: 93.6 bits (231), Expect = 1.7e-18
Identity = 43/125 (34.40%), Postives = 76/125 (60.80%), Query Frame = 0


Query: 3   IFSDFLERSVEIFMDDYSVFGESFKQYLRSLEEVLEKCEETHLVLNWEKCHFMVNEGIVL 62
           I  + + +   +++DD  VF E +  + ++L  VL    + +L +N EK HF+  +   L
Sbjct: 268 ILREHIGKVCYVYIDDIIVFSEDYDTHWKNLRLVLASLSKANLQVNLEKSHFLDTQVEFL 327

Query: 63  GQEISIAGLEVDPAKIDVVSKLPPPNDIKPLRSFLGHAGFYRRFIKGFSQIAKPLSNLLC 122
           G  ++  G++ DP K+  +S++PPP  +K L+ FLG   +YR+FI+ ++++AKPL+NL  
Sbjct: 328 GYIVTADGIKADPKKVRAISEMPPPTSVKELKRFLGMTSYYRKFIQDYAKVAKPLTNL-- 387

Query: 123 TNELY 128
           T  LY
Sbjct: 388 TRGLY 390

[Close]

BLAST of PI0003435 vs. ExPASy Swiss-Prot
Match: P04323 (Retrovirus-related Pol polyprotein from transposon 17.6 OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1)

HSP 1 Score: 90.1 bits (222), Expect = 1.9e-17
Identity = 44/122 (36.07%), Postives = 70/122 (57.38%), Query Frame = 0


Query: 3   IFSDFLERSVEIFMDDYSVFGESFKQYLRSLEEVLEKCEETHLVLNWEKCHFMVNEGIVL 62
           I    L +   +++DD  VF  S  ++L+SL  V EK  + +L L  +KC F+  E   L
Sbjct: 352 ILRPLLNKHCLVYLDDIIVFSTSLDEHLQSLGLVFEKLAKANLKLQLDKCEFLKQETTFL 411

Query: 63  GQEISIAGLEVDPAKIDVVSKLPPPNDIKPLRSFLGHAGFYRRFIKGFSQIAKPLSNLLC 122
           G  ++  G++ +P KI+ + K P P   K +++FLG  G+YR+FI  F+ IAKP++  L 
Sbjct: 412 GHVLTPDGIKPNPEKIEAIQKYPIPTKPKEIKAFLGLTGYYRKFIPNFADIAKPMTKCLK 471

Query: 123 TN 125
            N
Sbjct: 472 KN 473

[Close]

BLAST of PI0003435 vs. ExPASy Swiss-Prot
Match: P10394 (Retrovirus-related Pol polyprotein from transposon 412 OS=Drosophila melanogaster OX=7227 GN=POL PE=4 SV=1)

HSP 1 Score: 83.6 bits (205), Expect = 1.8e-15
Identity = 44/123 (35.77%), Postives = 65/123 (52.85%), Query Frame = 0


Query: 2   VIFSDFLERSVEIFMDDYSVFGESFKQYLRSLEEVLEKCEETHLVLNWEKCHFMVNEGIV 61
           + FS        ++MDD  V G S K  L++L EV  KC E +L L+ EKC F ++E   
Sbjct: 459 IAFSGIEPSQAFLYMDDLIVIGCSEKHMLKNLTEVFGKCREYNLKLHPEKCSFFMHEVTF 518

Query: 62  LGQEISIAGLEVDPAKIDVVSKLPPPNDIKPLRSFLGHAGFYRRFIKGFSQIAKPLSNLL 121
           LG + +  G+  D  K DV+   P P+D    R F+    +YRRFIK F+  ++ ++ L 
Sbjct: 519 LGHKCTDKGILPDDKKYDVIQNYPVPHDADSARRFVAFCNYYRRFIKNFADYSRHITRLC 578

Query: 122 CTN 125
             N
Sbjct: 579 KKN 581

[Close]

BLAST of PI0003435 vs. ExPASy Swiss-Prot
Match: P20825 (Retrovirus-related Pol polyprotein from transposon 297 OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1)

HSP 1 Score: 83.2 bits (204), Expect = 2.3e-15
Identity = 38/119 (31.93%), Postives = 67/119 (56.30%), Query Frame = 0


Query: 3   IFSDFLERSVEIFMDDYSVFGESFKQYLRSLEEVLEKCEETHLVLNWEKCHFMVNEGIVL 62
           I    L +   +++DD  +F  S  ++L S++ V  K  + +L L  +KC F+  E   L
Sbjct: 351 ILRPLLNKHCLVYLDDIIIFSTSLTEHLNSIQLVFTKLADANLKLQLDKCEFLKKEANFL 410

Query: 63  GQEISIAGLEVDPAKIDVVSKLPPPNDIKPLRSFLGHAGFYRRFIKGFSQIAKPLSNLL 122
           G  ++  G++ +P K+  +   P P   K +R+FLG  G+YR+FI  ++ IAKP+++ L
Sbjct: 411 GHIVTPDGIKPNPIKVKAIVSYPIPTKDKEIRAFLGLTGYYRKFIPNYADIAKPMTSCL 469

[Close]

BLAST of PI0003435 vs. ExPASy Swiss-Prot
Match: Q99315 (Transposon Ty3-G Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY3B-G PE=1 SV=3)

HSP 1 Score: 76.3 bits (186), Expect = 2.9e-13
Identity = 37/113 (32.74%), Postives = 61/113 (53.98%), Query Frame = 0


Query: 10  RSVEIFMDDYSVFGESFKQYLRSLEEVLEKCEETHLVLNWEKCHFMVNEGIVLGQEISIA 69
           R V +++DD  +F ES +++ + L+ VLE+ +  +L++  +KC F   E   LG  I I 
Sbjct: 741 RFVNVYLDDILIFSESPEEHWKHLDTVLERLKNENLIVKKKKCKFASEETEFLGYSIGIQ 800

Query: 70  GLEVDPAKIDVVSKLPPPNDIKPLRSFLGHAGFYRRFIKGFSQIAKPLSNLLC 123
            +     K   +   P P  +K  + FLG   +YRRFI   S+IA+P+   +C
Sbjct: 801 KIAPLQHKCAAIRDFPTPKTVKQAQRFLGMINYYRRFIPNCSKIAQPIQLFIC 853

[Close]

BLAST of PI0003435 vs. ExPASy TrEMBL
Match: A0A6P6SU28 (Reverse transcriptase OS=Coffea arabica OX=13443 GN=LOC113694771 PE=4 SV=1)

HSP 1 Score: 184.5 bits (467), Expect = 2.8e-43
Identity = 84/122 (68.85%), Postives = 105/122 (86.07%), Query Frame = 0


Query: 1   MVIFSDFLERSVEIFMDDYSVFGESFKQYLRSLEEVLEKCEETHLVLNWEKCHFMVNEGI 60
           M IFSD++E+ +EIFMDD+SV+G SF Q L +LE +L++CEET+LVLNWEKCHFMV EGI
Sbjct: 731 MAIFSDYIEKIMEIFMDDFSVYGSSFDQCLHNLELILQRCEETNLVLNWEKCHFMVKEGI 790

Query: 61  VLGQEISIAGLEVDPAKIDVVSKLPPPNDIKPLRSFLGHAGFYRRFIKGFSQIAKPLSNL 120
           VLG +IS  G+EVD AKI+V+ KLPPP+++K +RSFLGHAGFYRRFIK FS+I KPL +L
Sbjct: 791 VLGHKISSKGIEVDQAKIEVIEKLPPPSNVKGIRSFLGHAGFYRRFIKDFSKIVKPLCDL 850

Query: 121 LC 123
           LC
Sbjct: 851 LC 852

[Close]

BLAST of PI0003435 vs. ExPASy TrEMBL
Match: A0A6P6X9H2 (Reverse transcriptase OS=Coffea arabica OX=13443 GN=LOC113741122 PE=4 SV=1)

HSP 1 Score: 182.6 bits (462), Expect = 1.1e-42
Identity = 83/122 (68.03%), Postives = 104/122 (85.25%), Query Frame = 0


Query: 1    MVIFSDFLERSVEIFMDDYSVFGESFKQYLRSLEEVLEKCEETHLVLNWEKCHFMVNEGI 60
            M IFSD++E+ +EIFMDD+SV+G SF   L +LE +L++CEET+LVLNWEKCHFMV EGI
Sbjct: 935  MAIFSDYIEKIMEIFMDDFSVYGSSFDHCLHNLELILQRCEETNLVLNWEKCHFMVKEGI 994

Query: 61   VLGQEISIAGLEVDPAKIDVVSKLPPPNDIKPLRSFLGHAGFYRRFIKGFSQIAKPLSNL 120
            VLG +IS  G+EVD AKI+V+ KLPPP+++K +RSFLGHAGFYRRFIK FS+I KPL +L
Sbjct: 995  VLGHKISSKGIEVDQAKIEVIEKLPPPSNVKGIRSFLGHAGFYRRFIKDFSRIVKPLCDL 1054

Query: 121  LC 123
            LC
Sbjct: 1055 LC 1056

[Close]

BLAST of PI0003435 vs. ExPASy TrEMBL
Match: A0A6P6TF62 (Reverse transcriptase OS=Coffea arabica OX=13443 GN=LOC113700883 PE=4 SV=1)

HSP 1 Score: 182.6 bits (462), Expect = 1.1e-42
Identity = 83/122 (68.03%), Postives = 104/122 (85.25%), Query Frame = 0


Query: 1   MVIFSDFLERSVEIFMDDYSVFGESFKQYLRSLEEVLEKCEETHLVLNWEKCHFMVNEGI 60
           M IFSD++E+ +EIFMDD+SV+G SF   L +LE +L++CEET+LVLNWEKCHFMV EGI
Sbjct: 863 MAIFSDYIEKIMEIFMDDFSVYGSSFDHCLHNLELILQRCEETNLVLNWEKCHFMVKEGI 922

Query: 61  VLGQEISIAGLEVDPAKIDVVSKLPPPNDIKPLRSFLGHAGFYRRFIKGFSQIAKPLSNL 120
           VLG +IS  G+EVD AKI+V+ KLPPP+++K +RSFLGHAGFYRRFIK FS+I KPL +L
Sbjct: 923 VLGHKISSKGIEVDQAKIEVIEKLPPPSNVKGIRSFLGHAGFYRRFIKDFSRIVKPLCDL 982

Query: 121 LC 123
           LC
Sbjct: 983 LC 984

[Close]

BLAST of PI0003435 vs. ExPASy TrEMBL
Match: A0A6P6XBM5 (uncharacterized protein LOC113740969 OS=Coffea arabica OX=13443 GN=LOC113740969 PE=4 SV=1)

HSP 1 Score: 182.2 bits (461), Expect = 1.4e-42
Identity = 83/122 (68.03%), Postives = 104/122 (85.25%), Query Frame = 0


Query: 1   MVIFSDFLERSVEIFMDDYSVFGESFKQYLRSLEEVLEKCEETHLVLNWEKCHFMVNEGI 60
           M IFSD++E+ +EIFMDD+SV+G SF Q L +LE +L++CEET+LVLNWEKCHFMV EGI
Sbjct: 841 MAIFSDYIEKIMEIFMDDFSVYGSSFDQCLHNLELILQRCEETNLVLNWEKCHFMVKEGI 900

Query: 61  VLGQEISIAGLEVDPAKIDVVSKLPPPNDIKPLRSFLGHAGFYRRFIKGFSQIAKPLSNL 120
           VLG +IS  G+EVD AKI+V+ KLPPP+++K +RSFLGHA FYRRFIK FS+I KPL +L
Sbjct: 901 VLGHKISSKGIEVDQAKIEVIEKLPPPSNVKGIRSFLGHASFYRRFIKDFSKIVKPLCDL 960

Query: 121 LC 123
           LC
Sbjct: 961 LC 962

[Close]

BLAST of PI0003435 vs. ExPASy TrEMBL
Match: A0A151UCZ5 (Reverse transcriptase OS=Cajanus cajan OX=3821 GN=KK1_046633 PE=4 SV=1)

HSP 1 Score: 181.0 bits (458), Expect = 3.1e-42
Identity = 82/127 (64.57%), Postives = 106/127 (83.46%), Query Frame = 0


Query: 1   MVIFSDFLERSVEIFMDDYSVFGESFKQYLRSLEEVLEKCEETHLVLNWEKCHFMVNEGI 60
           + IF+D +E+ +E+FMDD+SVFG  F   L++L+ VL++C ET+LVLNWEKCHFMV EGI
Sbjct: 633 LAIFADLIEKCIEVFMDDFSVFGSFFDLCLKNLDIVLKRCVETNLVLNWEKCHFMVTEGI 692

Query: 61  VLGQEISIAGLEVDPAKIDVVSKLPPPNDIKPLRSFLGHAGFYRRFIKGFSQIAKPLSNL 120
           VLG +IS  G+EVDPAK++V++KLPPP ++K +RSFLGHAGFYRRFIK FS+IAKPLSNL
Sbjct: 693 VLGHKISAKGIEVDPAKVEVIAKLPPPINVKGIRSFLGHAGFYRRFIKDFSKIAKPLSNL 752

Query: 121 LCTNELY 128
           L  N  +
Sbjct: 753 LVKNSKF 759

[Close]

BLAST of PI0003435 vs. NCBI nr
Match: WP_217833188.1 (hypothetical protein, partial [Synechococcus sp. PCC 7002])

HSP 1 Score: 188.3 bits (477), Expect = 4.0e-44
Identity = 88/124 (70.97%), Postives = 107/124 (86.29%), Query Frame = 0


Query: 1   MVIFSDFLERSVEIFMDDYSVFGESFKQYLRSLEEVLEKCEETHLVLNWEKCHFMVNEGI 60
           M IFSD+LE+SVE+FMDD+SVFG+S+ + L +LE VL++CE+T+LVLNWEKCHFMV EGI
Sbjct: 2   MAIFSDYLEQSVEVFMDDFSVFGKSYDECLTNLERVLKRCEDTNLVLNWEKCHFMVTEGI 61

Query: 61  VLGQEISIAGLEVDPAKIDVVSKLPPPNDIKPLRSFLGHAGFYRRFIKGFSQIAKPLSNL 120
           VLG +IS  GLEVD A+ID ++KLP P ++K LRSFLGHAGFYRRFIKGFSQ+AKPLS L
Sbjct: 62  VLGHKISKVGLEVDQAEIDAIAKLPAPTNVKTLRSFLGHAGFYRRFIKGFSQVAKPLSEL 121

Query: 121 LCTN 125
           L  N
Sbjct: 122 LEAN 125

[Close]

BLAST of PI0003435 vs. NCBI nr
Match: XP_038894606.1 (uncharacterized mitochondrial protein AtMg00860-like [Benincasa hispida])

HSP 1 Score: 188.0 bits (476), Expect = 5.2e-44
Identity = 87/127 (68.50%), Postives = 109/127 (85.83%), Query Frame = 0


Query: 1   MVIFSDFLERSVEIFMDDYSVFGESFKQYLRSLEEVLEKCEETHLVLNWEKCHFMVNEGI 60
           M IFSDFLE++VE+FM+D+SVFG+SF+  L +LE +L +CEET+LVLNW+KCHFM+ EGI
Sbjct: 1   MAIFSDFLEKTVEVFMNDFSVFGDSFQSCLDNLEAILTRCEETNLVLNWKKCHFMMTEGI 60

Query: 61  VLGQEISIAGLEVDPAKIDVVSKLPPPNDIKPLRSFLGHAGFYRRFIKGFSQIAKPLSNL 120
           VLG ++S AGLEVD AKIDV++KLPP +++K LRSFLGH GFYRRF+KGFSQIA+PLS L
Sbjct: 61  VLGHKVSKAGLEVDEAKIDVIAKLPPSSNVKALRSFLGHVGFYRRFVKGFSQIARPLSAL 120

Query: 121 LCTNELY 128
           L  N  Y
Sbjct: 121 LEANRPY 127

[Close]

BLAST of PI0003435 vs. NCBI nr
Match: XP_027182258.1 (uncharacterized protein LOC113780676, partial [Coffea eugenioides])

HSP 1 Score: 184.5 bits (467), Expect = 5.7e-43
Identity = 84/122 (68.85%), Postives = 105/122 (86.07%), Query Frame = 0


Query: 1    MVIFSDFLERSVEIFMDDYSVFGESFKQYLRSLEEVLEKCEETHLVLNWEKCHFMVNEGI 60
            M IFSD++E+ +EIFMDD+SV+G SF Q L +LE +L++CEET+LVLNWEKCHFMV EGI
Sbjct: 1581 MAIFSDYIEKIMEIFMDDFSVYGSSFDQCLHNLELILQRCEETNLVLNWEKCHFMVKEGI 1640

Query: 61   VLGQEISIAGLEVDPAKIDVVSKLPPPNDIKPLRSFLGHAGFYRRFIKGFSQIAKPLSNL 120
            VLG +IS  G+EVD AKI+V+ KLPPP+++K +RSFLGHAGFYRRFIK FS+I KPL +L
Sbjct: 1641 VLGHKISSKGIEVDQAKIEVIEKLPPPSNVKGIRSFLGHAGFYRRFIKDFSKIVKPLCDL 1700

Query: 121  LC 123
            LC
Sbjct: 1701 LC 1702

[Close]

BLAST of PI0003435 vs. NCBI nr
Match: XP_027069437.1 (uncharacterized protein LOC113694771 [Coffea arabica])

HSP 1 Score: 184.5 bits (467), Expect = 5.7e-43
Identity = 84/122 (68.85%), Postives = 105/122 (86.07%), Query Frame = 0


Query: 1   MVIFSDFLERSVEIFMDDYSVFGESFKQYLRSLEEVLEKCEETHLVLNWEKCHFMVNEGI 60
           M IFSD++E+ +EIFMDD+SV+G SF Q L +LE +L++CEET+LVLNWEKCHFMV EGI
Sbjct: 731 MAIFSDYIEKIMEIFMDDFSVYGSSFDQCLHNLELILQRCEETNLVLNWEKCHFMVKEGI 790

Query: 61  VLGQEISIAGLEVDPAKIDVVSKLPPPNDIKPLRSFLGHAGFYRRFIKGFSQIAKPLSNL 120
           VLG +IS  G+EVD AKI+V+ KLPPP+++K +RSFLGHAGFYRRFIK FS+I KPL +L
Sbjct: 791 VLGHKISSKGIEVDQAKIEVIEKLPPPSNVKGIRSFLGHAGFYRRFIKDFSKIVKPLCDL 850

Query: 121 LC 123
           LC
Sbjct: 851 LC 852

[Close]

BLAST of PI0003435 vs. NCBI nr
Match: XP_040871056.1 (uncharacterized protein LOC121174822 [Glycine max])

HSP 1 Score: 183.0 bits (463), Expect = 1.7e-42
Identity = 86/121 (71.07%), Postives = 104/121 (85.95%), Query Frame = 0


Query: 1    MVIFSDFLERSVEIFMDDYSVFGESFKQYLRSLEEVLEKCEETHLVLNWEKCHFMVNEGI 60
            + IFSD +E+S+E+FMDD+SVFG SF   LR+LE VL++C ET+LVLNWEKCHFMV EGI
Sbjct: 1053 LAIFSDMVEKSIEVFMDDFSVFGSSFDSCLRNLEMVLQRCVETNLVLNWEKCHFMVREGI 1112

Query: 61   VLGQEISIAGLEVDPAKIDVVSKLPPPNDIKPLRSFLGHAGFYRRFIKGFSQIAKPLSNL 120
            VLG +IS  G+EVD AKI+V+ KLPPP +IK +RSFLGHAGFYRRFIK FS+IA+PLSNL
Sbjct: 1113 VLGHKISARGIEVDRAKIEVIEKLPPPLNIKGVRSFLGHAGFYRRFIKDFSKIARPLSNL 1172

Query: 121  L 122
            L
Sbjct: 1173 L 1173

[Close]

BLAST of PI0003435 vs. TAIR 10
Match: ATMG00860.1 (DNA/RNA polymerases superfamily protein )

HSP 1 Score: 67.8 bits (164), Expect = 7.3e-12
Identity = 37/99 (37.37%), Postives = 53/99 (53.54%), Query Frame = 0


Query: 30  LRSLEEVLEKCEETHLVLNWEKCHFMVNEGIVLGQE--ISIAGLEVDPAKIDVVSKLPPP 89
           +  L  VL+  E+     N +KC F   +   LG    IS  G+  DPAK++ +   P P
Sbjct: 1   MNHLGMVLQIWEQHQFYANRKKCAFGQPQIAYLGHRHIISGEGVSADPAKLEAMVGWPEP 60

Query: 90  NDIKPLRSFLGHAGFYRRFIKGFSQIAKPLSNLLCTNEL 127
            +   LR FLG  G+YRRF+K + +I +PL+ LL  N L
Sbjct: 61  KNTTELRGFLGLTGYYRRFVKNYGKIVRPLTELLKKNSL 99

The following BLAST results are available for this feature:

BLAST of PI0003435 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8I7P9	1.7e-18	34.40	Retrovirus-related Pol polyprotein from transposon opus OS=Drosophila melanogast...	[more]
P04323	1.9e-17	36.07	Retrovirus-related Pol polyprotein from transposon 17.6 OS=Drosophila melanogast...	[more]
P10394	1.8e-15	35.77	Retrovirus-related Pol polyprotein from transposon 412 OS=Drosophila melanogaste...	[more]
P20825	2.3e-15	31.93	Retrovirus-related Pol polyprotein from transposon 297 OS=Drosophila melanogaste...	[more]
Q99315	2.9e-13	32.74	Transposon Ty3-G Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 20...	[more]

BLAST of PI0003435 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6P6SU28	2.8e-43	68.85	Reverse transcriptase OS=Coffea arabica OX=13443 GN=LOC113694771 PE=4 SV=1	[more]
A0A6P6X9H2	1.1e-42	68.03	Reverse transcriptase OS=Coffea arabica OX=13443 GN=LOC113741122 PE=4 SV=1	[more]
A0A6P6TF62	1.1e-42	68.03	Reverse transcriptase OS=Coffea arabica OX=13443 GN=LOC113700883 PE=4 SV=1	[more]
A0A6P6XBM5	1.4e-42	68.03	uncharacterized protein LOC113740969 OS=Coffea arabica OX=13443 GN=LOC113740969 ...	[more]
A0A151UCZ5	3.1e-42	64.57	Reverse transcriptase OS=Cajanus cajan OX=3821 GN=KK1_046633 PE=4 SV=1	[more]

BLAST of PI0003435 vs. NCBI nr


Match Name	E-value	Identity	Description
WP_217833188.1	4.0e-44	70.97	hypothetical protein, partial [Synechococcus sp. PCC 7002]	[more]
XP_038894606.1	5.2e-44	68.50	uncharacterized mitochondrial protein AtMg00860-like [Benincasa hispida]	[more]
XP_027182258.1	5.7e-43	68.85	uncharacterized protein LOC113780676, partial [Coffea eugenioides]	[more]
XP_027069437.1	5.7e-43	68.85	uncharacterized protein LOC113694771 [Coffea arabica]	[more]
XP_040871056.1	1.7e-42	71.07	uncharacterized protein LOC121174822 [Glycine max]	[more]

BLAST of PI0003435 vs. TAIR 10


Match Name	E-value	Identity	Description
ATMG00860.1	7.3e-12	37.37	DNA/RNA polymerases superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR043128	Reverse transcriptase/Diguanylate cyclase domain	GENE3D	3.30.70.270		coord: 1..70 e-value: 5.0E-17 score: 64.0
IPR043128	Reverse transcriptase/Diguanylate cyclase domain	GENE3D	3.30.70.270		coord: 76..126 e-value: 1.1E-15 score: 59.4
None	No IPR available	PANTHER	PTHR24559:SF345	SUBFAMILY NOT NAMED	coord: 11..121
None	No IPR available	PANTHER	PTHR24559	TRANSPOSON TY3-I GAG-POL POLYPROTEIN	coord: 11..121
IPR043502	DNA/RNA polymerase superfamily	SUPERFAMILY	56672	DNA/RNA polymerases	coord: 3..124

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0003435.1	PI0003435.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006520	cellular amino acid metabolic process
biological_process	GO:0015074	DNA integration
biological_process	GO:0006278	RNA-dependent DNA biosynthetic process
molecular_function	GO:0004069	L-aspartate:2-oxoglutarate aminotransferase activity
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0030170	pyridoxal phosphate binding
molecular_function	GO:0003964	RNA-directed DNA polymerase activity