PI0003273 (gene) Melon (PI 482460) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGAGTGACGGTGAACAACCCGAATTCGTGCTTGACCCTGAAATTGAACGAACTTTTCAGCATAACAGAAGAAGAGGGAGGCAACAAAGAGTGAACATAATGACAAACAATAACAACAACCAAAATGTTCCTCCCCAACAAGCTGCCCAAGAACAAAATGCCGCCTACATGACCCATGATTTAGACAGACCGATTATGTCGTATGCTTCGCCAAACCTCTATAACTTCAGCCTAGGAATTGCCTACCTTGTGTTCGGCGAAAATACAAGATTTGAGATCAATCCTGTTATAATACAGATCATTCAGAACACCAGACAGTTTGGTGGTCACCCTAGTGAAGATCCACACGAGCATATTCATAGTTTCTACTCCATTTATGTTTCCTTTCACATGTCTGACATATTGCCTAAAGACGTACGATTTGTCCTCTTCCCATTAACACTGAGGGATGAGGCAAAGAGATGA ATGAGTGACGGTGAACAACCCGAATTCGTGCTTGACCCTGAAATTGAACGAACTTTTCAGCATAACAGAAGAAGAGGGAGGCAACAAAGAGTGAACATAATGACAAACAATAACAACAACCAAAATGTTCCTCCCCAACAAGCTGCCCAAGAACAAAATGCCGCCTACATGACCCATGATTTAGACAGACCGATTATGTCGTATGCTTCGCCAAACCTCTATAACTTCAGCCTAGGAATTGCCTACCTTGTGTTCGGCGAAAATACAAGATTTGAGATCAATCCTGTTATAATACAGATCATTCAGAACACCAGACAGTTTGGTGGTCACCCTAGTGAAGATCCACACGAGCATATTCATAGTTTCTACTCCATTTATGTTTCCTTTCACATGTCTGACATATTGCCTAAAGACGTACGATTTGTCCTCTTCCCATTAACACTGAGGGATGAGGCAAAGAGATGA ATGAGTGACGGTGAACAACCCGAATTCGTGCTTGACCCTGAAATTGAACGAACTTTTCAGCATAACAGAAGAAGAGGGAGGCAACAAAGAGTGAACATAATGACAAACAATAACAACAACCAAAATGTTCCTCCCCAACAAGCTGCCCAAGAACAAAATGCCGCCTACATGACCCATGATTTAGACAGACCGATTATGTCGTATGCTTCGCCAAACCTCTATAACTTCAGCCTAGGAATTGCCTACCTTGTGTTCGGCGAAAATACAAGATTTGAGATCAATCCTGTTATAATACAGATCATTCAGAACACCAGACAGTTTGGTGGTCACCCTAGTGAAGATCCACACGAGCATATTCATAGTTTCTACTCCATTTATGTTTCCTTTCACATGTCTGACATATTGCCTAAAGACGTACGATTTGTCCTCTTCCCATTAACACTGAGGGATGAGGCAAAGAGATGA MSDGEQPEFVLDPEIERTFQHNRRRGRQQRVNIMTNNNNNQNVPPQQAAQEQNAAYMTHDLDRPIMSYASPNLYNFSLGIAYLVFGENTRFEINPVIIQIIQNTRQFGGHPSEDPHEHIHSFYSIYVSFHMSDILPKDVRFVLFPLTLRDEAKR Homology
BLAST of PI0003273 vs. ExPASy TrEMBL
Match: A0A5A7V2U7 (Putative disease resistance RPP13-like protein 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold313G001950 PE=4 SV=1) HSP 1 Score: 129.4 bits (324), Expect = 1.3e-26 Identity = 65/111 (58.56%), Postives = 78/111 (70.27%), Query Frame = 0
BLAST of PI0003273 vs. ExPASy TrEMBL
Match: A0A5A7UDN8 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold609G00900 PE=4 SV=1) HSP 1 Score: 123.2 bits (308), Expect = 9.2e-25 Identity = 58/93 (62.37%), Postives = 70/93 (75.27%), Query Frame = 0
BLAST of PI0003273 vs. ExPASy TrEMBL
Match: A0A5D3BVN1 (Putative disease resistance RPP13-like protein 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold388G00390 PE=4 SV=1) HSP 1 Score: 112.5 bits (280), Expect = 1.6e-21 Identity = 57/98 (58.16%), Postives = 69/98 (70.41%), Query Frame = 0
BLAST of PI0003273 vs. ExPASy TrEMBL
Match: A0A5A7UXZ2 (Retrovirus-related Pol polyprotein from transposon 17.6 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold137G00610 PE=4 SV=1) HSP 1 Score: 107.1 bits (266), Expect = 6.8e-20 Identity = 60/109 (55.05%), Postives = 74/109 (67.89%), Query Frame = 0
BLAST of PI0003273 vs. ExPASy TrEMBL
Match: A0A5D3CAB5 (Retrovirus-related Pol polyprotein from transposon 17.6 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold796G00060 PE=4 SV=1) HSP 1 Score: 106.7 bits (265), Expect = 8.9e-20 Identity = 60/109 (55.05%), Postives = 74/109 (67.89%), Query Frame = 0
BLAST of PI0003273 vs. NCBI nr
Match: KAA0062403.1 (putative disease resistance RPP13-like protein 1 [Cucumis melo var. makuwa] >TYK26578.1 putative disease resistance RPP13-like protein 1 [Cucumis melo var. makuwa]) HSP 1 Score: 129.4 bits (324), Expect = 2.6e-26 Identity = 65/111 (58.56%), Postives = 78/111 (70.27%), Query Frame = 0
BLAST of PI0003273 vs. NCBI nr
Match: WP_217833177.1 (retrotransposon gag domain-containing protein, partial [Synechococcus sp. PCC 7002]) HSP 1 Score: 123.6 bits (309), Expect = 1.4e-24 Identity = 71/169 (42.01%), Postives = 96/169 (56.80%), Query Frame = 0
BLAST of PI0003273 vs. NCBI nr
Match: KAA0051815.1 (hypothetical protein E6C27_scaffold60G002300 [Cucumis melo var. makuwa] >TYK21429.1 hypothetical protein E5676_scaffold609G00900 [Cucumis melo var. makuwa]) HSP 1 Score: 123.2 bits (308), Expect = 1.9e-24 Identity = 58/93 (62.37%), Postives = 70/93 (75.27%), Query Frame = 0
BLAST of PI0003273 vs. NCBI nr
Match: XP_038887458.1 (uncharacterized protein LOC120077591 [Benincasa hispida]) HSP 1 Score: 115.2 bits (287), Expect = 5.2e-22 Identity = 67/158 (42.41%), Postives = 95/158 (60.13%), Query Frame = 0
BLAST of PI0003273 vs. NCBI nr
Match: TYK02149.1 (putative disease resistance RPP13-like protein 1 [Cucumis melo var. makuwa]) HSP 1 Score: 112.5 bits (280), Expect = 3.3e-21 Identity = 57/98 (58.16%), Postives = 69/98 (70.41%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
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