PI0003192 (gene) Melon (PI 482460) v1

Overview
NamePI0003192
Typegene
OrganismCucumis metuliferus (Melon (PI 482460) v1)
DescriptionUnknown protein
Locationchr08: 9312573 .. 9314625 (-)
RNA-Seq ExpressionPI0003192
SyntenyPI0003192
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGGATTTTGAAGGAGTTTATTTGAATTCAACGATGTAAGTAATTCTTTATTTCTATATTTCCATTTTTTTCATCTGCATTTGTAAATTACTTGTTTGATAGGCAATGATAGAACTCTATCACTCGTTATCACTGATAGGCATGATAGAACTCCATCTCTGGCTATCATCGATAGGCAGTGATAGAACTCCATCACTAGCTATCACCGATAGGAAGTGATAGAACTCCATCACTGGCTATCACCGATAAGCAGTGATATACATGTCTATCACAATGGTGCTAAATAAATTTTCTAATAAGTTTTATGTGTTTACTTGTAGTTTTCTATGATTCCACTCCAAATGACAGAGGAAGAATCTAAATCAGAGATAATGCAATATTTTATTGACTGGAGAAGAAGGAGGTTGAGGAAAAAGAAAAAGAAGAACAAAGAAAATAAAGAAAATAAAGAACTAAATAAATTGATTGAAGAAGATTGAAGAAATAAAGTCACTGTGAAAAGAATTGTGCAGGACATTGAGGAATTAAAAGAAAGTTAGAAGAGAATAATTGAAGGAGAAAAGAAAATTCAAGAGGAACAAAAAGAATTTAGAAAAGGACATAAAGAAATTATTAGTTTGTTGAAAACATTAAGAATTGTATAAAGAATGTTTCATTGGAAAATCTTCCTCAAGAGTTTGAAGAAGAAAAAGAACTTGAACTGACCTTGGAGAAAACAAACCTCTTTTTTGTAGTCTGGAAGTTTTGGAAGATGACAGGAATGTTGATAACATAGTAAACTATGTGAAGAATTATTTATCTGCGGTAGGTTTTTGGTATATGGTATTTTACTTTTTTAAGTTGTATCTATTAGATTACTAACTATAAAATTTCTTTTTCTTATAGGTTGAAATTGAAAATAAAAACCAAACCCAACAACTTCAAACACAAGAGTCAGAACCTATTGTTGCAATGATTGGTTTAGAAACTCCTGTAACTCAAGTGTTGGGAGATGATGAGACAATAACAAAAAAGAAAAAGGTTTCATTTCTTTTATTAAAATACTTGCTTTTGATCGCTGTGGAAATAAGTTATTGTCTATAAGTATTTATCTTAAACACAAAACGATAACAAATTATGTTGTTGTAGGAGATTGAAGGTGAAGATTTAGAAGAAACTCCAATAACTCAAGAGTTAGAGGATGATCATGAAGAAAAGGTTTCATTCTTCTTATTAACAAATTGTATCTCTTTTCGTACTCTTAGTATTTAGTATTTATCTCTTGTACTTTGAGTTTTTATTGAATAGAGACTGTCTTCCTTTTAAAAAAAACACATTTGCTATTATGTACAATCATAGTCTTCTATAAGTTTCTATAATGATAGCCAAATGATAGACAATGATAGAAGTCTATCAGTGTCTATCTTAGACATATTACAATAACAAATCATATTGTTGTAGGAGATTGAAGGTGAAGATATAAAGGAAACTCAAAATTTTTACATGATTTTCATCTGATTTTAATGCTTTCTTGTGTCATCCTTATTGTCTATCACTGATAGACAATGATACTATTATATCACTGTTGGAAAAAAAACATTATTTTGTTCTTTAAAGTTTTTTTTACAGTAGTTTAAAGTTAAGTTTAATGAATTTCAGGATTATGATGTGGAAGAAAATGAAAGAAGGGAGAGAGTAATAATTTAGAAACGACAAAAAGGTAATTGTAGTTAATAGTGTATATTTACAACAAATTTAAATTTTTTTTTACAATTATTAACGAAAGATACTTTCTTGTAGCCTTTTGATGATAAGGGCAGCAATGAAGAAGATAATGTGGAAAATGAAATGGAAAAGAAAGCAAGAATAAAAAATAAAAGAAAACAAACGAATGGGAAAAAAGTAAATGAAAAACAGTGACTATTCATAATGCTTCTAATATTTATATCACTGACATTCTTTCTTGTTACCATTATCTCAGATATCTGAAGTCGAAGTTGAAGGAAAAGGGAAACACAAAAAATTTAAAGCAAAGGTATTAACTGATGATGATTACCAAGTTGTGAATTAA

mRNA sequence

ATGGAGGATTTTGAAGGAGTTTATTTGAATTCAACGATTCTGGAAGTTTTGGAAGATGACAGGAATGTTGATAACATAGTAAACTATGTGAAGAATTATTTATCTGCGGTTGAAATTGAAAATAAAAACCAAACCCAACAACTTCAAACACAAGAGTCAGAACCTATTGTTGCAATGATTGGTTTAGAAACTCCTGTAACTCAAGTGTTGGGAGATGATGAGACAATAACAAAAAAGAAAAAGGAGATTGAAGGTGAAGATTTAGAAGAAACTCCAATAACTCAAGAGTTAGAGGATGATCATGAAGAAAAGATATCTGAAGTCGAAGTTGAAGGAAAAGGGAAACACAAAAAATTTAAAGCAAAGGTATTAACTGATGATGATTACCAAGTTGTGAATTAA

Coding sequence (CDS)

ATGGAGGATTTTGAAGGAGTTTATTTGAATTCAACGATTCTGGAAGTTTTGGAAGATGACAGGAATGTTGATAACATAGTAAACTATGTGAAGAATTATTTATCTGCGGTTGAAATTGAAAATAAAAACCAAACCCAACAACTTCAAACACAAGAGTCAGAACCTATTGTTGCAATGATTGGTTTAGAAACTCCTGTAACTCAAGTGTTGGGAGATGATGAGACAATAACAAAAAAGAAAAAGGAGATTGAAGGTGAAGATTTAGAAGAAACTCCAATAACTCAAGAGTTAGAGGATGATCATGAAGAAAAGATATCTGAAGTCGAAGTTGAAGGAAAAGGGAAACACAAAAAATTTAAAGCAAAGGTATTAACTGATGATGATTACCAAGTTGTGAATTAA

Protein sequence

MEDFEGVYLNSTILEVLEDDRNVDNIVNYVKNYLSAVEIENKNQTQQLQTQESEPIVAMIGLETPVTQVLGDDETITKKKKEIEGEDLEETPITQELEDDHEEKISEVEVEGKGKHKKFKAKVLTDDDYQVVN
Homology
[Close]
BLAST of PI0003192 vs. ExPASy TrEMBL
Match: A0A0A0M0Q0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G661740 PE=4 SV=1)

HSP 1 Score: 63.9 bits (154), Expect = 5.7e-07
Identity = 41/63 (65.08%), Postives = 47/63 (74.60%), Query Frame = 0 

Query: 59  MIGL-ETPVTQVLGDDETITKKKKEIEGEDLEETPITQELEDDHEEKISEVEVEGKGKHK 118
           M+GL  TP TQVL DDE  T+K+KEIEGEDLEET ITQ LEDD EEK + VE E K + +
Sbjct: 1   MVGLATTPATQVLEDDEIATEKEKEIEGEDLEETSITQSLEDDDEEKDANVE-ENKRRER 60

Query: 119 KFK 121
           K K
Sbjct: 61  KSK 62

[Close]
BLAST of PI0003192 vs. NCBI nr
Match: KAE8653587.1 (hypothetical protein Csa_007190 [Cucumis sativus])

HSP 1 Score: 63.9 bits (154), Expect = 1.2e-06
Identity = 41/63 (65.08%), Postives = 47/63 (74.60%), Query Frame = 0 

Query: 59  MIGL-ETPVTQVLGDDETITKKKKEIEGEDLEETPITQELEDDHEEKISEVEVEGKGKHK 118
           M+GL  TP TQVL DDE  T+K+KEIEGEDLEET ITQ LEDD EEK + VE E K + +
Sbjct: 1   MVGLATTPATQVLEDDEIATEKEKEIEGEDLEETSITQSLEDDDEEKDANVE-ENKRRER 60

Query: 119 KFK 121
           K K
Sbjct: 61  KSK 62

The following BLAST results are available for this feature:
BLAST of PI0003192 vs.
Match NameE-valueIdentityDescription
BLAST of PI0003192 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0M0Q05.7e-0765.08Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G661740 PE=4 SV=1[more]
BLAST of PI0003192 vs. NCBI nr
Match NameE-valueIdentityDescription
KAE8653587.11.2e-0665.08hypothetical protein Csa_007190 [Cucumis sativus][more]
BLAST of PI0003192 vs. NCBI nr
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 34..54

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
PI0003192.1PI0003192.1mRNA