PI0003185 (gene) Melon (PI 482460) v1

Overview


Name	PI0003185
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	Retrotransposon protein
Location	chr01: 11428148 .. 11428828 (-)
RNA-Seq Expression	PI0003185
Synteny	PI0003185

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAGTGGTTTCAGGTAGGGTACTTTATGAATGGTCGTTACTTGGACACATTTACCTCTACGGTTTGCATATTTACGATCTTCGTACAATGCAGAATTGCCTAGGTGCGTTAGATGACATATACATAAAGGTAAAAGTAAGTGCAGCTGATCGTCCGAGGTATAGGACACGAAAGGGTAAAGTTTCCACGAACGTCCTAGGTGTATGTGATACGAAAGACGATTTTGTGTTCGTCTTAGCTGGTTGGGAAAGGTCCGCAACGGATTCTCGCATCCTTAGAGATGATATTTCAAGGCCTAATGGACTAAGGGTTCCGAAGGGTAAGTACATACCCATCATTCTTCTCAATCATACTGTAAATTTTCGACAATAGACATTTGAAAGATTCGATATCCCAACAGGGTACTACTACCTATGCGATGACGGGAGCTCACGCGAAGACATTCGTCGACGTTGGGTCGAATGTGCCTGAAGGGTTCGAGGGATTTCCCACTGATTATGGAAACTATACGGAGATTCCTATGATGTACAATCAGGGACTAGACATGTCACCTGATGGAGGGTAGGGACTGGTTCAAGCGGATCAAAGAGGAAGCGAGGAGGCCAGGCAGCACAGACTGTCGAAATCATTCAGAATGCAATGGACTTCGCCAATGACCAGTTGAAGGCCATTGCGTAG

mRNA sequence

ATGGAAGTGGTTTCAGGTAGGGTACTTTATGAATGGTCGTTACTTGGACACATTTACCTCTACGGTTTGCATATTTACGATCTTCGTACAATGCAGAATTGCCTAGGTGCGTTAGATGACATATACATAAAGGTAAAAGTAAGTGCAGCTGATCGTCCGAGGTATAGGACACGAAAGGGTAAAGTTTCCACGAACGTCCTAGGTGTATGTGATACGAAAGACGATTTTGTGTTCGTCTTAGCTGGTTGGGAAAGGTCCGCAACGGATTCTCGCATCCTTAGAGATGATATTTCAAGGCCTAATGGACTAAGGGTTCCGAAGGATTCGATATCCCAACAGGGTACTACTACCTATGCGATGACGGGAGCTCACGCGAAGACATTCGTCGACGTTGGGTCGAATGTGCCTGAAGGGTTCGAGGGATTTCCCACTGATTATGGAAACTATACGGAGATTCCTATGATGTACAATCAGGGACTAGACATGTCACCTGATGGAGGCGGATCAAAGAGGAAGCGAGGAGGCCAGGCAGCACAGACTGTCGAAATCATTCAGAATGCAATGGACTTCGCCAATGACCAGTTGAAGGCCATTGCGTAG

Coding sequence (CDS)

ATGGAAGTGGTTTCAGGTAGGGTACTTTATGAATGGTCGTTACTTGGACACATTTACCTCTACGGTTTGCATATTTACGATCTTCGTACAATGCAGAATTGCCTAGGTGCGTTAGATGACATATACATAAAGGTAAAAGTAAGTGCAGCTGATCGTCCGAGGTATAGGACACGAAAGGGTAAAGTTTCCACGAACGTCCTAGGTGTATGTGATACGAAAGACGATTTTGTGTTCGTCTTAGCTGGTTGGGAAAGGTCCGCAACGGATTCTCGCATCCTTAGAGATGATATTTCAAGGCCTAATGGACTAAGGGTTCCGAAGGATTCGATATCCCAACAGGGTACTACTACCTATGCGATGACGGGAGCTCACGCGAAGACATTCGTCGACGTTGGGTCGAATGTGCCTGAAGGGTTCGAGGGATTTCCCACTGATTATGGAAACTATACGGAGATTCCTATGATGTACAATCAGGGACTAGACATGTCACCTGATGGAGGCGGATCAAAGAGGAAGCGAGGAGGCCAGGCAGCACAGACTGTCGAAATCATTCAGAATGCAATGGACTTCGCCAATGACCAGTTGAAGGCCATTGCGTAG

Protein sequence

MEVVSGRVLYEWSLLGHIYLYGLHIYDLRTMQNCLGALDDIYIKVKVSAADRPRYRTRKGKVSTNVLGVCDTKDDFVFVLAGWERSATDSRILRDDISRPNGLRVPKDSISQQGTTTYAMTGAHAKTFVDVGSNVPEGFEGFPTDYGNYTEIPMMYNQGLDMSPDGGGSKRKRGGQAAQTVEIIQNAMDFANDQLKAIA

Homology

[Close]

BLAST of PI0003185 vs. ExPASy TrEMBL
Match: A0A5D3BBW3 (Putative nuclease HARBI1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold546G001560 PE=4 SV=1)

HSP 1 Score: 164.5 bits (415), Expect = 4.6e-37
Identity = 96/179 (53.63%), Postives = 118/179 (65.92%), Query Frame = 0


Query: 32  QNCLGALDDIYIKVKVSAADRPRYRTRKGKVSTNVLGVCDTKDDFVFVLAGWERSATDSR 91
           +NCLG LDD YIKV VSA D PRYRTRKG+V+TNVLGV DT DDFVFVL+GWE S  DSR
Sbjct: 64  ENCLGTLDDTYIKVNVSATDCPRYRTRKGEVATNVLGVYDTNDDFVFVLSGWEGSIADSR 123

Query: 92  ILRDDISRPNGLRVPK-DSISQQGTTTYAM---------TGAHAKTFVDVGSNVPEGF-E 151
           ILRD+I R N L+V K D ++      Y +         TGA ++TFVD  SNVP  F +
Sbjct: 124 ILRDEILRHNELKVLKEDFLAPYRGERYHLSEWLGEDQTTGARSETFVDARSNVPNMFND 183

Query: 152 GFPTDYGNYTEIPMMYNQGLDMSPDGGGSKRKRGGQAAQTVEIIQNAMDFANDQLKAIA 200
           G P    ++ +IP +Y+QG+ MS D      K  G  A   E+I++AM+F NDQLKAIA
Sbjct: 184 GVPLSNSHHEDIPTIYSQGVHMSLD------KMFGTRA---EVIRSAMEFENDQLKAIA 233

[Close]

BLAST of PI0003185 vs. ExPASy TrEMBL
Match: A0A5A7VGH2 (Putative nuclease HARBI1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold38G002660 PE=3 SV=1)

HSP 1 Score: 153.7 bits (387), Expect = 8.2e-34
Identity = 92/181 (50.83%), Postives = 109/181 (60.22%), Query Frame = 0


Query: 32  QNCLGALDDIYIKVKVSAADRPRYRTRKGKVSTNVLGVCDTKDDFVFVLAGWERSATDSR 91
           +NCLGALD  YIKV VSA DRPRYRTRKG V TNVLGVCD K DFVFVL+ WE SATDSR
Sbjct: 96  ENCLGALDGTYIKVNVSATDRPRYRTRKGDVVTNVLGVCDKKGDFVFVLSRWEGSATDSR 155

Query: 92  ILRDDISRPNGLR-------VPKDSISQQGTTTYA-----MTGAHAKTFVDVGSNVPEGF 151
           IL+D ISR NGL+       +   S       +Y      +T   + TFV+VGSNVP  F
Sbjct: 156 ILKDAISRHNGLKSHPAAKGLLNKSFPYYDDLSYVFGKDRVTRERSDTFVNVGSNVPNVF 215

Query: 152 -EGFPTDYGNYTEIPMMYNQGLDMSPDGGGSKRKRGGQAAQTVEIIQNAMDFANDQLKAI 200
            +          +IPMMY+QG+ MSPD     R          E+ ++ M+  NDQLKAI
Sbjct: 216 NDDVALGDSPDQDIPMMYSQGVHMSPDEMFGIR---------AEVTRSVMELGNDQLKAI 267

[Close]

BLAST of PI0003185 vs. ExPASy TrEMBL
Match: A0A5A7SQU2 (Putative nuclease HARBI1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold472G00070 PE=3 SV=1)

HSP 1 Score: 150.2 bits (378), Expect = 9.1e-33
Identity = 113/336 (33.63%), Postives = 135/336 (40.18%), Query Frame = 0


Query: 32  QNCLGALDDIYIKVKVSAADRPRYRTRKGKVSTNVLGVCDTKDDFVFVLAGWERSATDSR 91
           +NCLGALDD YIKV VSA DRPRY TRKG+V+ NVLGVCDTK DFVFVL+GWE SA DSR
Sbjct: 96  ENCLGALDDTYIKVNVSATDRPRYSTRKGEVAINVLGVCDTKGDFVFVLSGWEGSAADSR 155

Query: 92  ILRDDISRPNGLRVPK-------------------------------------------- 151
           ILRD ISR NGL+VPK                                            
Sbjct: 156 ILRDAISRHNGLKVPKGYYYLCDAGYSNVEGFLAPYRGERYHLSEWHGGSNAPTTAREFF 215

Query: 152 ------------------------------------------------------------ 200
                                                                       
Sbjct: 216 NMKHSSARNVIKRAFWLLKGCWAILRGKSYYPVDVQCRTIMVCCLLHNLINREMTNSEII 275

[Close]

BLAST of PI0003185 vs. ExPASy TrEMBL
Match: A0A5A7USN6 (Putative nuclease HARBI1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold106G00100 PE=3 SV=1)

HSP 1 Score: 141.4 bits (355), Expect = 4.2e-30
Identity = 92/252 (36.51%), Postives = 118/252 (46.83%), Query Frame = 0


Query: 32  QNCLGALDDIYIKVKVSAADRPRYRTRKGKVSTNVLGVCDTKDDFVFVLAGWERSATDSR 91
           +NC G LDD YIKV V+A +RPRY+T+KG+V+TNVLGVCDTK DFVFVL+ W+ S  DSR
Sbjct: 41  ENCFGVLDDTYIKVNVNATNRPRYKTQKGEVATNVLGVCDTKGDFVFVLSRWKGSVADSR 100

Query: 92  ILRDDISRPNGLRVPKDSISQQGTTTYAM------------------------------- 151
           IL+D ISR N L+V K  +       Y +                               
Sbjct: 101 ILKDAISRHNELKVLKGFLGPNRGERYHLLEWHGGGNAPTTAREFFNMKHSSVRNVIERA 160

Query: 152 ------------------------------------TGAHAKTFVDVGSNVPEGF-EGFP 200
                                               T   ++TF  VGSNVP  F +G P
Sbjct: 161 FGLLKGRWSHPAAKGLLHKSFPYYDDLSYVFGKDRATKERSETFSGVGSNVPNMFNDGVP 220

[Close]

BLAST of PI0003185 vs. ExPASy TrEMBL
Match: A0A5A7UAW6 (Putative nuclease HARBI1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold237G00120 PE=3 SV=1)

HSP 1 Score: 137.9 bits (346), Expect = 4.6e-29
Identity = 91/230 (39.57%), Postives = 115/230 (50.00%), Query Frame = 0


Query: 32  QNCLGALDDIYIKVKVSAADRPRYRTRKGKVSTNVLGVCDTKDDFVFVLAGWERSATDSR 91
           +N L  LD  YIKV VSA DRPRYRTRKG+V+TNVL VCDTK DFVFVL+ WE SA DSR
Sbjct: 69  ENYLATLDGTYIKVNVSATDRPRYRTRKGEVATNVLDVCDTKGDFVFVLSEWEGSAADSR 128

Query: 92  ILRDDISRPNGLRVPKD---------------SISQQGTTTYAM---------------- 151
           ILRD ISR   L+V K                 +  +   T+ +                
Sbjct: 129 ILRDAISRHKRLKVSKGYYDLCDAGYPNAEEWQVHHEHRNTHGLKRKKQNLLSNWWNWFQ 188

Query: 152 ----------------TGAHAKTFVDVGSNVPEGF-EGFPTDYGNYTEIPMMYNQGLDMS 197
                             A  +TF +VGSNV   F +  P D  +  +IP MY+QG+ MS
Sbjct: 189 LGDEGLIMGHFDLDRAMRARLETFANVGSNVLNMFNDSVPHDDSHDQDIPTMYSQGVHMS 248

[Close]

BLAST of PI0003185 vs. NCBI nr
Match: KAA0065769.1 (putative nuclease HARBI1 [Cucumis melo var. makuwa] >TYJ96509.1 putative nuclease HARBI1 [Cucumis melo var. makuwa])

HSP 1 Score: 164.5 bits (415), Expect = 9.6e-37
Identity = 96/179 (53.63%), Postives = 118/179 (65.92%), Query Frame = 0


Query: 32  QNCLGALDDIYIKVKVSAADRPRYRTRKGKVSTNVLGVCDTKDDFVFVLAGWERSATDSR 91
           +NCLG LDD YIKV VSA D PRYRTRKG+V+TNVLGV DT DDFVFVL+GWE S  DSR
Sbjct: 64  ENCLGTLDDTYIKVNVSATDCPRYRTRKGEVATNVLGVYDTNDDFVFVLSGWEGSIADSR 123

Query: 92  ILRDDISRPNGLRVPK-DSISQQGTTTYAM---------TGAHAKTFVDVGSNVPEGF-E 151
           ILRD+I R N L+V K D ++      Y +         TGA ++TFVD  SNVP  F +
Sbjct: 124 ILRDEILRHNELKVLKEDFLAPYRGERYHLSEWLGEDQTTGARSETFVDARSNVPNMFND 183

Query: 152 GFPTDYGNYTEIPMMYNQGLDMSPDGGGSKRKRGGQAAQTVEIIQNAMDFANDQLKAIA 200
           G P    ++ +IP +Y+QG+ MS D      K  G  A   E+I++AM+F NDQLKAIA
Sbjct: 184 GVPLSNSHHEDIPTIYSQGVHMSLD------KMFGTRA---EVIRSAMEFENDQLKAIA 233

[Close]

BLAST of PI0003185 vs. NCBI nr
Match: KAA0067183.1 (putative nuclease HARBI1 [Cucumis melo var. makuwa])

HSP 1 Score: 153.7 bits (387), Expect = 1.7e-33
Identity = 92/181 (50.83%), Postives = 109/181 (60.22%), Query Frame = 0


Query: 32  QNCLGALDDIYIKVKVSAADRPRYRTRKGKVSTNVLGVCDTKDDFVFVLAGWERSATDSR 91
           +NCLGALD  YIKV VSA DRPRYRTRKG V TNVLGVCD K DFVFVL+ WE SATDSR
Sbjct: 96  ENCLGALDGTYIKVNVSATDRPRYRTRKGDVVTNVLGVCDKKGDFVFVLSRWEGSATDSR 155

Query: 92  ILRDDISRPNGLR-------VPKDSISQQGTTTYA-----MTGAHAKTFVDVGSNVPEGF 151
           IL+D ISR NGL+       +   S       +Y      +T   + TFV+VGSNVP  F
Sbjct: 156 ILKDAISRHNGLKSHPAAKGLLNKSFPYYDDLSYVFGKDRVTRERSDTFVNVGSNVPNVF 215

Query: 152 -EGFPTDYGNYTEIPMMYNQGLDMSPDGGGSKRKRGGQAAQTVEIIQNAMDFANDQLKAI 200
            +          +IPMMY+QG+ MSPD     R          E+ ++ M+  NDQLKAI
Sbjct: 216 NDDVALGDSPDQDIPMMYSQGVHMSPDEMFGIR---------AEVTRSVMELGNDQLKAI 267

[Close]

BLAST of PI0003185 vs. NCBI nr
Match: KAA0033290.1 (putative nuclease HARBI1 [Cucumis melo var. makuwa] >TYK14818.1 putative nuclease HARBI1 [Cucumis melo var. makuwa])

HSP 1 Score: 150.2 bits (378), Expect = 1.9e-32
Identity = 113/336 (33.63%), Postives = 135/336 (40.18%), Query Frame = 0


Query: 32  QNCLGALDDIYIKVKVSAADRPRYRTRKGKVSTNVLGVCDTKDDFVFVLAGWERSATDSR 91
           +NCLGALDD YIKV VSA DRPRY TRKG+V+ NVLGVCDTK DFVFVL+GWE SA DSR
Sbjct: 96  ENCLGALDDTYIKVNVSATDRPRYSTRKGEVAINVLGVCDTKGDFVFVLSGWEGSAADSR 155

Query: 92  ILRDDISRPNGLRVPK-------------------------------------------- 151
           ILRD ISR NGL+VPK                                            
Sbjct: 156 ILRDAISRHNGLKVPKGYYYLCDAGYSNVEGFLAPYRGERYHLSEWHGGSNAPTTAREFF 215

Query: 152 ------------------------------------------------------------ 200
                                                                       
Sbjct: 216 NMKHSSARNVIKRAFWLLKGCWAILRGKSYYPVDVQCRTIMVCCLLHNLINREMTNSEII 275

[Close]

BLAST of PI0003185 vs. NCBI nr
Match: KAA0056515.1 (putative nuclease HARBI1 [Cucumis melo var. makuwa] >TYK12085.1 putative nuclease HARBI1 [Cucumis melo var. makuwa])

HSP 1 Score: 141.4 bits (355), Expect = 8.7e-30
Identity = 92/252 (36.51%), Postives = 118/252 (46.83%), Query Frame = 0


Query: 32  QNCLGALDDIYIKVKVSAADRPRYRTRKGKVSTNVLGVCDTKDDFVFVLAGWERSATDSR 91
           +NC G LDD YIKV V+A +RPRY+T+KG+V+TNVLGVCDTK DFVFVL+ W+ S  DSR
Sbjct: 41  ENCFGVLDDTYIKVNVNATNRPRYKTQKGEVATNVLGVCDTKGDFVFVLSRWKGSVADSR 100

Query: 92  ILRDDISRPNGLRVPKDSISQQGTTTYAM------------------------------- 151
           IL+D ISR N L+V K  +       Y +                               
Sbjct: 101 ILKDAISRHNELKVLKGFLGPNRGERYHLLEWHGGGNAPTTAREFFNMKHSSVRNVIERA 160

Query: 152 ------------------------------------TGAHAKTFVDVGSNVPEGF-EGFP 200
                                               T   ++TF  VGSNVP  F +G P
Sbjct: 161 FGLLKGRWSHPAAKGLLHKSFPYYDDLSYVFGKDRATKERSETFSGVGSNVPNMFNDGVP 220

[Close]

BLAST of PI0003185 vs. NCBI nr
Match: KAA0050755.1 (putative nuclease HARBI1 [Cucumis melo var. makuwa] >TYK20446.1 putative nuclease HARBI1 [Cucumis melo var. makuwa])

HSP 1 Score: 137.9 bits (346), Expect = 9.6e-29
Identity = 91/230 (39.57%), Postives = 115/230 (50.00%), Query Frame = 0


Query: 32  QNCLGALDDIYIKVKVSAADRPRYRTRKGKVSTNVLGVCDTKDDFVFVLAGWERSATDSR 91
           +N L  LD  YIKV VSA DRPRYRTRKG+V+TNVL VCDTK DFVFVL+ WE SA DSR
Sbjct: 69  ENYLATLDGTYIKVNVSATDRPRYRTRKGEVATNVLDVCDTKGDFVFVLSEWEGSAADSR 128

Query: 92  ILRDDISRPNGLRVPKD---------------SISQQGTTTYAM---------------- 151
           ILRD ISR   L+V K                 +  +   T+ +                
Sbjct: 129 ILRDAISRHKRLKVSKGYYDLCDAGYPNAEEWQVHHEHRNTHGLKRKKQNLLSNWWNWFQ 188

Query: 152 ----------------TGAHAKTFVDVGSNVPEGF-EGFPTDYGNYTEIPMMYNQGLDMS 197
                             A  +TF +VGSNV   F +  P D  +  +IP MY+QG+ MS
Sbjct: 189 LGDEGLIMGHFDLDRAMRARLETFANVGSNVLNMFNDSVPHDDSHDQDIPTMYSQGVHMS 248

[Close]

BLAST of PI0003185 vs. TAIR 10
Match: AT5G28950.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G41980.1); Has 448 Blast hits to 446 proteins in 74 species: Archae - 0; Bacteria - 0; Metazoa - 31; Fungi - 21; Plants - 396; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 76.3 bits (186), Expect = 3.2e-14
Identity = 35/83 (42.17%), Postives = 55/83 (66.27%), Query Frame = 0


Query: 32  QNCLGALDDIYIKVKVSAADRPRYRTRKGKVSTNVLGVCDTKDDFVFVLAGWERSATDSR 91
           ++C+GA+DD +I   VS    P +R RKG +S N+L  C+   +F++VL+GWE SA DS+
Sbjct: 23  KDCVGAIDDTHIFAMVSQKKMPSFRNRKGDISQNMLAACNFDVEFMYVLSGWEGSAHDSK 82

Query: 92  ILRDDISR-PNGLRVPKDSISQQ 114
           +L D ++R  N L VP++  S +
Sbjct: 83  VLNDALTRNSNRLPVPEEDESAE 105

[Close]

BLAST of PI0003185 vs. TAIR 10
Match: AT5G41980.1 (CONTAINS InterPro DOMAIN/s: Putative harbinger transposase-derived nuclease (InterPro:IPR006912); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G43722.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 58.9 bits (141), Expect = 5.3e-09
Identity = 27/76 (35.53%), Postives = 45/76 (59.21%), Query Frame = 0


Query: 32  QNCLGALDDIYIKVKVSAADRPRYRTRKGKVSTNVLGVCDTKDDFVFVLAGWERSATDSR 91
           ++C+G +D  +I V V   ++  +R   G ++ NVL        F +VLAGWE SA+D +
Sbjct: 141 KDCVGVVDSFHIPVMVGVDEQGPFRNGNGLLTQNVLAASSFDLRFNYVLAGWEGSASDQQ 200

Query: 92  ILRDDISRPNGLRVPK 108
           +L   ++R N L+VP+
Sbjct: 201 VLNAALTRRNKLQVPQ 216

The following BLAST results are available for this feature:

BLAST of PI0003185 vs.


Match Name	E-value	Identity	Description

BLAST of PI0003185 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3BBW3	4.6e-37	53.63	Putative nuclease HARBI1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffol...	[more]
A0A5A7VGH2	8.2e-34	50.83	Putative nuclease HARBI1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffol...	[more]
A0A5A7SQU2	9.1e-33	33.63	Putative nuclease HARBI1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffol...	[more]
A0A5A7USN6	4.2e-30	36.51	Putative nuclease HARBI1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffol...	[more]
A0A5A7UAW6	4.6e-29	39.57	Putative nuclease HARBI1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffol...	[more]

BLAST of PI0003185 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0065769.1	9.6e-37	53.63	putative nuclease HARBI1 [Cucumis melo var. makuwa] >TYJ96509.1 putative nucleas...	[more]
KAA0067183.1	1.7e-33	50.83	putative nuclease HARBI1 [Cucumis melo var. makuwa]	[more]
KAA0033290.1	1.9e-32	33.63	putative nuclease HARBI1 [Cucumis melo var. makuwa] >TYK14818.1 putative nucleas...	[more]
KAA0056515.1	8.7e-30	36.51	putative nuclease HARBI1 [Cucumis melo var. makuwa] >TYK12085.1 putative nucleas...	[more]
KAA0050755.1	9.6e-29	39.57	putative nuclease HARBI1 [Cucumis melo var. makuwa] >TYK20446.1 putative nucleas...	[more]

BLAST of PI0003185 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G28950.1	3.2e-14	42.17	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT5G41980.1	5.3e-09	35.53	CONTAINS InterPro DOMAIN/s: Putative harbinger transposase-derived nuclease (Int...	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR22930:SF201	NUCLEASE HARBI1-LIKE PROTEIN	coord: 37..109
None	No IPR available	PANTHER	PTHR22930	UNCHARACTERIZED	coord: 37..109

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0003185.1	PI0003185.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0046872	metal ion binding