PI0002596 (gene) Melon (PI 482460) v1

Overview
NamePI0002596
Typegene
OrganismCucumis metuliferus (Melon (PI 482460) v1)
DescriptionUnknown protein
Locationchr01: 27798222 .. 27798506 (-)
RNA-Seq ExpressionPI0002596
SyntenyPI0002596
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTTTGTCTGGGAATATTGTTTGGCTGCAAAAGATCTCGCTCCCCAACAGACTATCTCCTCTCAGCTTTACTCCTCATAGCCATACTTTCTTCTCTCCGTCTCCTCTGCTACCTCGTTTCTCGCTTCTTGAAACGACGACGCAACAACCAGCATCCCGATCCCACCTCCGAAGTTCAACCACAGACCGACTTTGCTCATCTTCACCAACCAACACCTATGCCAGACAACAAGTTTCTTACCCCTGCTGATATTCTTCCTCTTGCTGCCTTCTCAAGAAAGTAA

mRNA sequence

ATGGTTTGTCTGGGAATATTGTTTGGCTGCAAAAGATCTCGCTCCCCAACAGACTATCTCCTCTCAGCTTTACTCCTCATAGCCATACTTTCTTCTCTCCGTCTCCTCTGCTACCTCGTTTCTCGCTTCTTGAAACGACGACGCAACAACCAGCATCCCGATCCCACCTCCGAAGTTCAACCACAGACCGACTTTGCTCATCTTCACCAACCAACACCTATGCCAGACAACAAGTTTCTTACCCCTGCTGATATTCTTCCTCTTGCTGCCTTCTCAAGAAAGTAA

Coding sequence (CDS)

ATGGTTTGTCTGGGAATATTGTTTGGCTGCAAAAGATCTCGCTCCCCAACAGACTATCTCCTCTCAGCTTTACTCCTCATAGCCATACTTTCTTCTCTCCGTCTCCTCTGCTACCTCGTTTCTCGCTTCTTGAAACGACGACGCAACAACCAGCATCCCGATCCCACCTCCGAAGTTCAACCACAGACCGACTTTGCTCATCTTCACCAACCAACACCTATGCCAGACAACAAGTTTCTTACCCCTGCTGATATTCTTCCTCTTGCTGCCTTCTCAAGAAAGTAA

Protein sequence

MVCLGILFGCKRSRSPTDYLLSALLLIAILSSLRLLCYLVSRFLKRRRNNQHPDPTSEVQPQTDFAHLHQPTPMPDNKFLTPADILPLAAFSRK
Homology
BLAST of PI0002596 vs. ExPASy TrEMBL
Match: A0A5D3BWC6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold347G002090 PE=4 SV=1)

HSP 1 Score: 183.7 bits (465), Expect = 3.5e-43
Identity = 92/94 (97.87%), Postives = 92/94 (97.87%), Query Frame = 0

Query: 1   MVCLGILFGCKRSRSPTDYLLSALLLIAILSSLRLLCYLVSRFLKRRRNNQHPDPTSEVQ 60
           MVCLGILFGCKRSRSPTDYLLSALLLIAILSSLRLLCYLVSRFLKRRRNNQHPDPTSEVQ
Sbjct: 61  MVCLGILFGCKRSRSPTDYLLSALLLIAILSSLRLLCYLVSRFLKRRRNNQHPDPTSEVQ 120

Query: 61  PQTDFAHLHQPTPMPDNKFLTPADILPLAAFSRK 95
           PQTD AHLHQPTPMPDNKFLTPAD LPLAAFSRK
Sbjct: 121 PQTDVAHLHQPTPMPDNKFLTPADALPLAAFSRK 154

BLAST of PI0002596 vs. ExPASy TrEMBL
Match: A0A0A0KAI0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G447070 PE=4 SV=1)

HSP 1 Score: 176.8 bits (447), Expect = 4.3e-41
Identity = 88/94 (93.62%), Postives = 90/94 (95.74%), Query Frame = 0

Query: 1  MVCLGILFGCKRSRSPTDYLLSALLLIAILSSLRLLCYLVSRFLKRRRNNQHPDPTSEVQ 60
          MVCLGILFGCKRSR+PTDYLLSALLLI ILSSLRLLCYLVSRFLKRRRNNQHPDPTSEVQ
Sbjct: 1  MVCLGILFGCKRSRTPTDYLLSALLLIVILSSLRLLCYLVSRFLKRRRNNQHPDPTSEVQ 60

Query: 61 PQTDFAHLHQPTPMPDNKFLTPADILPLAAFSRK 95
          PQTD AHL QPTPMPDNK LTPAD+LPLAAFSRK
Sbjct: 61 PQTDVAHLQQPTPMPDNKVLTPADVLPLAAFSRK 94

BLAST of PI0002596 vs. ExPASy TrEMBL
Match: A0A1Q3CBF1 (Uncharacterized protein OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_21036 PE=4 SV=1)

HSP 1 Score: 70.1 bits (170), Expect = 5.6e-09
Identity = 42/93 (45.16%), Postives = 58/93 (62.37%), Query Frame = 0

Query: 1  MVCLGILFGCKRSRSPTDYLLSALLLIAILSSLRLLCYLVSRFLKRRRNNQHPDPTSEV- 60
          MVCLG+ FGCK SRS  DY+LSAL++IAIL  LR++CY +SR LK  R++ H D    + 
Sbjct: 1  MVCLGLFFGCKHSRSAKDYVLSALVIIAILFGLRIICYAISRLLKNNRHS-HGDRNLNIT 60

Query: 61 --------QPQTDFAH-LHQPTPMPDNKFLTPA 84
                   P T +AH +     +P++KFL+ A
Sbjct: 61 GLEMQPAASPATGYAHRICLRRALPESKFLSLA 92

BLAST of PI0002596 vs. ExPASy TrEMBL
Match: A0A2C9W267 (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_04G131600 PE=4 SV=1)

HSP 1 Score: 64.7 bits (156), Expect = 2.4e-07
Identity = 32/52 (61.54%), Postives = 39/52 (75.00%), Query Frame = 0

Query: 1  MVCLGILFGCKRSRSPTDYLLSALLLIAILSSLRLLCYLVSRFLKRRRNNQH 53
          MVCLG+LFGCK SRS TDY+LSAL++IAIL  LR+ CY + R LK+     H
Sbjct: 1  MVCLGVLFGCKHSRSITDYVLSALVIIAILFCLRIFCYTIYRLLKKDDLQDH 52

BLAST of PI0002596 vs. ExPASy TrEMBL
Match: A0A2K2BZW9 (Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_001G186400 PE=4 SV=1)

HSP 1 Score: 62.4 bits (150), Expect = 1.2e-06
Identity = 33/72 (45.83%), Postives = 48/72 (66.67%), Query Frame = 0

Query: 1  MVCLGILFGCKRSRSPTDYLLSALLLIAILSSLRLLCYLVSRFLKRRRNNQHPDPTS--E 60
          MVC+GI+FGCK SRS  DY+LSAL+++ IL  LR+ CY + R LK+ +     D     E
Sbjct: 1  MVCIGIIFGCKHSRSIKDYVLSALVIVTILICLRIFCYAIYRLLKKEQPRHGEDRRGGLE 60

Query: 61 VQPQTDFAHLHQ 71
          +QP+ + +H H+
Sbjct: 61 MQPE-NASHAHR 71

BLAST of PI0002596 vs. NCBI nr
Match: TYK04011.1 (hypothetical protein E5676_scaffold347G002090 [Cucumis melo var. makuwa])

HSP 1 Score: 183.7 bits (465), Expect = 7.2e-43
Identity = 92/94 (97.87%), Postives = 92/94 (97.87%), Query Frame = 0

Query: 1   MVCLGILFGCKRSRSPTDYLLSALLLIAILSSLRLLCYLVSRFLKRRRNNQHPDPTSEVQ 60
           MVCLGILFGCKRSRSPTDYLLSALLLIAILSSLRLLCYLVSRFLKRRRNNQHPDPTSEVQ
Sbjct: 61  MVCLGILFGCKRSRSPTDYLLSALLLIAILSSLRLLCYLVSRFLKRRRNNQHPDPTSEVQ 120

Query: 61  PQTDFAHLHQPTPMPDNKFLTPADILPLAAFSRK 95
           PQTD AHLHQPTPMPDNKFLTPAD LPLAAFSRK
Sbjct: 121 PQTDVAHLHQPTPMPDNKFLTPADALPLAAFSRK 154

BLAST of PI0002596 vs. NCBI nr
Match: KGN45392.1 (hypothetical protein Csa_016516 [Cucumis sativus])

HSP 1 Score: 176.8 bits (447), Expect = 8.8e-41
Identity = 88/94 (93.62%), Postives = 90/94 (95.74%), Query Frame = 0

Query: 1  MVCLGILFGCKRSRSPTDYLLSALLLIAILSSLRLLCYLVSRFLKRRRNNQHPDPTSEVQ 60
          MVCLGILFGCKRSR+PTDYLLSALLLI ILSSLRLLCYLVSRFLKRRRNNQHPDPTSEVQ
Sbjct: 1  MVCLGILFGCKRSRTPTDYLLSALLLIVILSSLRLLCYLVSRFLKRRRNNQHPDPTSEVQ 60

Query: 61 PQTDFAHLHQPTPMPDNKFLTPADILPLAAFSRK 95
          PQTD AHL QPTPMPDNK LTPAD+LPLAAFSRK
Sbjct: 61 PQTDVAHLQQPTPMPDNKVLTPADVLPLAAFSRK 94

BLAST of PI0002596 vs. NCBI nr
Match: KAG6575525.1 (Protein UXT-like protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 97.4 bits (241), Expect = 6.8e-17
Identity = 60/100 (60.00%), Postives = 67/100 (67.00%), Query Frame = 0

Query: 1   MVCLGILFGCKRSRSPTDYLLSALLLIAILSSLRLLCYLVSRFLKR---RRNNQHPDPTS 60
           MVCLGILFGC  SRS TDYLLSALLLI ILSSLRLLC  ++RFLKR   RR +  PDP  
Sbjct: 167 MVCLGILFGCNSSRSSTDYLLSALLLIPILSSLRLLCSFLTRFLKRYRQRRYDPSPDPAI 226

Query: 61  EVQPQTDFAHLHQPTPMPDNKFLTPADIL----PLAAFSR 94
           ++QPQ         TP+PDNK L  A +     PL AFSR
Sbjct: 227 QLQPQIS-------TPLPDNKLLASAALAHALPPLPAFSR 259

BLAST of PI0002596 vs. NCBI nr
Match: GAV77565.1 (hypothetical protein CFOL_v3_21036 [Cephalotus follicularis])

HSP 1 Score: 70.1 bits (170), Expect = 1.2e-08
Identity = 42/93 (45.16%), Postives = 58/93 (62.37%), Query Frame = 0

Query: 1  MVCLGILFGCKRSRSPTDYLLSALLLIAILSSLRLLCYLVSRFLKRRRNNQHPDPTSEV- 60
          MVCLG+ FGCK SRS  DY+LSAL++IAIL  LR++CY +SR LK  R++ H D    + 
Sbjct: 1  MVCLGLFFGCKHSRSAKDYVLSALVIIAILFGLRIICYAISRLLKNNRHS-HGDRNLNIT 60

Query: 61 --------QPQTDFAH-LHQPTPMPDNKFLTPA 84
                   P T +AH +     +P++KFL+ A
Sbjct: 61 GLEMQPAASPATGYAHRICLRRALPESKFLSLA 92

BLAST of PI0002596 vs. NCBI nr
Match: KAG5229164.1 (Heat shock protein [Salix suchowensis])

HSP 1 Score: 64.3 bits (155), Expect = 6.4e-07
Identity = 35/72 (48.61%), Postives = 47/72 (65.28%), Query Frame = 0

Query: 1  MVCLGILFGCKRSRSPTDYLLSALLLIAILSSLRLLCYLVSRFLKRR--RNNQHPDPTSE 60
          MVCLG + GCK SRS TDY+LSAL+++ IL  LR+ CY + R LK+   R+ +      E
Sbjct: 1  MVCLGFIIGCKHSRSITDYVLSALVIVTILICLRIFCYAIYRLLKKEHPRHGEDQSVGLE 60

Query: 61 VQPQTDFAHLHQ 71
          +QP+T   H HQ
Sbjct: 61 MQPETT-RHAHQ 71

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5D3BWC63.5e-4397.87Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A0A0KAI04.3e-4193.62Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G447070 PE=4 SV=1[more]
A0A1Q3CBF15.6e-0945.16Uncharacterized protein OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_21036 PE=4... [more]
A0A2C9W2672.4e-0761.54Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_04G131600 PE=4 SV=... [more]
A0A2K2BZW91.2e-0645.83Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_001G186400 PE=4 ... [more]
Match NameE-valueIdentityDescription
TYK04011.17.2e-4397.87hypothetical protein E5676_scaffold347G002090 [Cucumis melo var. makuwa][more]
KGN45392.18.8e-4193.62hypothetical protein Csa_016516 [Cucumis sativus][more]
KAG6575525.16.8e-1760.00Protein UXT-like protein, partial [Cucurbita argyrosperma subsp. sororia][more]
GAV77565.11.2e-0845.16hypothetical protein CFOL_v3_21036 [Cephalotus follicularis][more]
KAG5229164.16.4e-0748.61Heat shock protein [Salix suchowensis][more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 49..68

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
PI0002596.1PI0002596.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane