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PI0002502 (gene) Melon (PI 482460) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AGAAAATGTAGGGTGAAAAACGTAATTTGTGGAGATGGAAGAGGCGGACAATTGGAGCGCCAATTATTAGTGAATTACAAAAATTCCACTCTCCACATATTAATATAATATTAATATTATTTTAGTTTATTTATACGCCGTCGCTCCTTGCCTCATCAAAATTGCCTTCTACTTTTCTTTTCCGCTCTAATTTCTAATTTTCCCTCAAACATTTTCTCTAATTAATTTCTTTTCAATATGAAGAAATCGGGTTTCATCGCCGCCTCCGTTGCCGCCGCATCCGCATCCGCCTCCGCCGCCGCCGCCTCCGCCTCCCCTTCTTCCTCTACCCTTGTTTGCAACCCAAAAGTTCAATTCCCTCGCCAGGTATCCCTTCAATCCACGATTCATCATTCATTCATTTTCCCTCTTTAAAAAATCTTTCCTTTCAGAATTTGAAACCTCAATTATTTGTTTGATCCTGTAAATTTCTTGTCTTTTGAGATTTGGTAAGTTTTAATTACGCAGGGGGGAAAGGAAGGAGAGAAGTCTTCCTCATCGTCTTCCACCGATAAATTTGCTCCTAAATTTGATGGATTGAGATTTATTGAAACTCTTGTAACGGCTCATAGATGAACTGCGCCGGCCAAGGTGACGGTGACGGTGACGGTCGTGGCTGCATTTGCGGAGGCGACGGACCCACCGTGGCCGCAACTTTGTATGGTTCCTTTATTGTTAATTTTTTTTTAGTTTTTCTTGTCAAAAGAAATGATAGATGATAGGGAATATTGTTGAAAGTCTCTTATTTTGGACATTAAACTAATAATAATTTTTAGTTTATATTTTTCATTATTTTAATGAAAATTAGCAAAAGATGGAATGAAGAAAAACGTGTATTGGGTTTGGTTTTTGGGGTTGGGGAATAATTGTGTTCATAAAACAACTTTTGAGGAAAGGAAAAAGAGAGAAAGGGGTGACGTGTACATGTAATATAAAGAAAAATAAGACTTTTGAATAAGCAAAAGAAAAGTTTGATTTTA AGAAAATGTAGGGTGAAAAACGTAATTTGTGGAGATGGAAGAGGCGGACAATTGGAGCGCCAATTATTAGTGAATTACAAAAATTCCACTCTCCACATATTAATATAATATTAATATTATTTTAGTTTATTTATACGCCGTCGCTCCTTGCCTCATCAAAATTGCCTTCTACTTTTCTTTTCCGCTCTAATTTCTAATTTTCCCTCAAACATTTTCTCTAATTAATTTCTTTTCAATATGAAGAAATCGGGTTTCATCGCCGCCTCCGTTGCCGCCGCATCCGCATCCGCCTCCGCCGCCGCCGCCTCCGCCTCCCCTTCTTCCTCTACCCTTGTTTGCAACCCAAAAGTTCAATTCCCTCGCCAGGGGGGAAAGGAAGGAGAGAAGTCTTCCTCATCGTCTTCCACCGATAAATTTGCTCCTAAATTTGATGGATTGAGATTTATTGAAACTCTTGTAACGGCTCATAGATGAACTGCGCCGGCCAAGGTGACGGTGACGGTGACGGTCGTGGCTGCATTTGCGGAGGCGACGGACCCACCGTGGCCGCAACTTTGTATGGTTCCTTTATTGTTAATTTTTTTTTAGTTTTTCTTGTCAAAAGAAATGATAGATGATAGGGAATATTGTTGAAAGTCTCTTATTTTGGACATTAAACTAATAATAATTTTTAGTTTATATTTTTCATTATTTTAATGAAAATTAGCAAAAGATGGAATGAAGAAAAACGTGTATTGGGTTTGGTTTTTGGGGTTGGGGAATAATTGTGTTCATAAAACAACTTTTGAGGAAAGGAAAAAGAGAGAAAGGGGTGACGTGTACATGTAATATAAAGAAAAATAAGACTTTTGAATAAGCAAAAGAAAAGTTTGATTTTA ATGAAGAAATCGGGTTTCATCGCCGCCTCCGTTGCCGCCGCATCCGCATCCGCCTCCGCCGCCGCCGCCTCCGCCTCCCCTTCTTCCTCTACCCTTGTTTGCAACCCAAAAGTTCAATTCCCTCGCCAGGGGGGAAAGGAAGGAGAGAAGTCTTCCTCATCGTCTTCCACCGATAAATTTGCTCCTAAATTTGATGGATTGAGATTTATTGAAACTCTTGTAACGGCTCATAGATGA MKKSGFIAASVAAASASASAAAASASPSSSTLVCNPKVQFPRQGGKEGEKSSSSSSTDKFAPKFDGLRFIETLVTAHR Homology
BLAST of PI0002502 vs. ExPASy TrEMBL
Match: A0A6J1CHM8 (uncharacterized protein LOC111011258 OS=Momordica charantia OX=3673 GN=LOC111011258 PE=4 SV=1) HSP 1 Score: 99.4 bits (246), Expect = 7.2e-18 Identity = 62/78 (79.49%), Postives = 63/78 (80.77%), Query Frame = 0
BLAST of PI0002502 vs. ExPASy TrEMBL
Match: A0A6J1I1D6 (uncharacterized protein LOC111469626 OS=Cucurbita maxima OX=3661 GN=LOC111469626 PE=4 SV=1) HSP 1 Score: 95.9 bits (237), Expect = 7.9e-17 Identity = 61/79 (77.22%), Postives = 65/79 (82.28%), Query Frame = 0
BLAST of PI0002502 vs. ExPASy TrEMBL
Match: E0CTD2 (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_12s0028g03790 PE=4 SV=1) HSP 1 Score: 78.6 bits (192), Expect = 1.3e-11 Identity = 53/83 (63.86%), Postives = 60/83 (72.29%), Query Frame = 0
BLAST of PI0002502 vs. ExPASy TrEMBL
Match: A0A061EAV9 (Phospho-N-acetylmuramoyl-pentapeptide-transferase, putative OS=Theobroma cacao OX=3641 GN=TCM_008102 PE=4 SV=1) HSP 1 Score: 77.0 bits (188), Expect = 3.8e-11 Identity = 50/80 (62.50%), Postives = 57/80 (71.25%), Query Frame = 0
BLAST of PI0002502 vs. ExPASy TrEMBL
Match: A0A6J1AJZ1 (uncharacterized protein LOC110418707 OS=Herrania umbratica OX=108875 GN=LOC110418707 PE=4 SV=1) HSP 1 Score: 75.9 bits (185), Expect = 8.5e-11 Identity = 50/80 (62.50%), Postives = 57/80 (71.25%), Query Frame = 0
BLAST of PI0002502 vs. NCBI nr
Match: XP_038902353.1 (uncharacterized protein LOC120088987 [Benincasa hispida]) HSP 1 Score: 110.2 bits (274), Expect = 8.4e-21 Identity = 66/78 (84.62%), Postives = 67/78 (85.90%), Query Frame = 0
BLAST of PI0002502 vs. NCBI nr
Match: XP_004139940.2 (cell wall integrity and stress response component 1 [Cucumis sativus]) HSP 1 Score: 109.0 bits (271), Expect = 1.9e-20 Identity = 70/90 (77.78%), Postives = 70/90 (77.78%), Query Frame = 0
BLAST of PI0002502 vs. NCBI nr
Match: XP_022140652.1 (uncharacterized protein LOC111011258 [Momordica charantia]) HSP 1 Score: 99.4 bits (246), Expect = 1.5e-17 Identity = 62/78 (79.49%), Postives = 63/78 (80.77%), Query Frame = 0
BLAST of PI0002502 vs. NCBI nr
Match: KAG6604795.1 (hypothetical protein SDJN03_02112, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 97.1 bits (240), Expect = 7.4e-17 Identity = 62/79 (78.48%), Postives = 65/79 (82.28%), Query Frame = 0
BLAST of PI0002502 vs. NCBI nr
Match: KAG7010372.1 (hypothetical protein SDJN02_27165, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 96.7 bits (239), Expect = 9.6e-17 Identity = 60/78 (76.92%), Postives = 65/78 (83.33%), Query Frame = 0
BLAST of PI0002502 vs. TAIR 10
Match: AT4G28290.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; Has 45 Blast hits to 45 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 45; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 58.5 bits (140), Expect = 2.7e-09 Identity = 40/82 (48.78%), Postives = 54/82 (65.85%), Query Frame = 0
BLAST of PI0002502 vs. TAIR 10
Match: AT5G42110.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 6 growth stages; Has 36 Blast hits to 36 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 36; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 40.0 bits (92), Expect = 9.9e-04 Identity = 33/78 (42.31%), Postives = 44/78 (56.41%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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