PI0002425 (gene) Melon (PI 482460) v1

Overview


Name	PI0002425
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	DNA-directed RNA polymerase
Location	chr04: 16153745 .. 16163687 (+)
RNA-Seq Expression	PI0002425
Synteny	PI0002425

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGTCTTTATTCCTTGGTTGGTTCAAACCCTTGCGTGATGCAATTGTTGCAGTGCAAGAATTTTGCAAGGATAAGAAGTGTAGATCGAGTCATGCTCCTTATTTCGATCTTCTACCGGCATATAAGATGGCAGTGATTACAATGCATAAGTTAATGGGGTTGCTGATGAGTGGTACTGTAGGAAACGATAGTGTCAGGGTAGTCCAAGCTGCTTCTGAGATAGGAGAAGCAATTGAACATGAGGTTGGTTGGTTTAAATTTCTTATTTTGATTGTCTACATTTTCGTATTTGGTTCAGATTTCCAATTGATAATAAGTTTGTCAGAGATCATAGTGAAAAACTAGGCATGTGTTGCTTTTGGCATGAAAATTATGTTAAATCTAATACTTCTCTTGCTCTTTCTTTTCTCATTTTTCTTTTATTTTTTAACTACAAGTTTGTAATGTCTTACCTTTGCCTATTCCTGACCCCCTGCAAGTTAGCAGTTTATTGCTAGTGCAATACTAAATTTTTTTCTTGGCATGTACTTCTTTCTTTGTGATTTGAGGTTCCAATTTTCATAACCCACTAATGAGACACAATGGTGTAATGTACAATGTGAAAATTTCTCCTGCATGTCTCCACCCTTCACCCGATGTCAAGTATTGCCGATGATTAGCTATTTTTCTGTCAAATTTTGTGCATACTCTTAAAATCATCACGATAGATGAACAGTTAATAAGCCTTCTGCTTTCTTAATTTATTTTTCATATTTTATCTCACTTCAAATATTCTACATGTTCTTTCTATGTTCGATCTGTATCAGTATTACTACTGCTCCTACTAATTGTCAATATTTGGTTTCTTCTTGTAGGAAACTAGCAAGAGATATGATGTTATTGAATGTAATTCACTTGTTCGCCGAGGCCTGGGGAAAACTCTATGTAGAATCATATACTGTAGACTTAATGTAGAGTTGGTTGCATTTTTTAAAATAGTTCTCAGACATTCTTATGGTTGTCTGATTATGCAACCGTATAGTTCTGCTAGACTCTCTCTCAAAATTACTCGCTTTATGTCTTGGATTAGTGATTTTCTTCAGTTTTTTCTTAGGCTAGGCACATGGTTGGTTCGTATATGCCTATGTTGGTGCCTCATCTTAATTGGACAGGGTGGGTAACTCTATATTTGAAGCTGTTTCAATAATTCCTAATAGTTTTCATGAGTAGTTAGAGATTGAAAACTTTGTTTCATTTTATATATACCCTTTGTTGGAGAGTAAAGATTTGAGTGATGCGACATGCATATTCATTGATGTCATTCTTTGAAGCTTCAGTTTCATTGGTCATATTCTAGTTCTGTTTGGTATTTGATATATGCTAATTTGGTGTAGGTATGACAACGGGGCATACTTATTCCTACCATCATATGTTATGCGAATACATGGGGCAAAACAGCAACGTGAAGCAGTTAAAAGGGCTCCAAGAAAGCAACTAGAGCCTATTTTTAAGGTTTGAGTTGGTTTGTTATCCTAGTTTAATGATTTTTATACATACCTTTGATTTTTCGTAAACTCTTTCCCATGTACCATGTTGAAACATTAATATCTCTAGGGACAATTATAAGATATTACCACTTTATTGAAGAAAAGTTTCTCTTTGATTTAGTGTTTCATGGCGTTCACCTTTGAAGTTGTGATGCAATCAGAAGGAGCTTTTAAGAGTTGGCCCTTAGGAAAAAAATTCAACTTGAAGTTTCTTTATGAGTTCCAGTATGCTGGTGGTGTGGACAAGTTATCTTATAAGGAACGAATATCATTTACCGAGAACCATTTGGATGAGATTTTTTATTCTGCAAACATGCCTCTTGAAGGACGGGGTTGGTGGTTGGGTGCAGAGGATCCTTTTCAGTGCTTGGCAGTGTGTATTAATCTGTCAGAGTCATTAAGAAGTCCCTCGACGGAAACAACTATTTCCCATATACCTGTACATCAGGTATTACTTTCATTATTCTTGTTATTTGTTCCCAAATTTTCAATGTATTGTTCGTTTTTTGAATCCGGTAATTATGATAAGGGACCTCATAACTCATATATGGGTTCTACAAACTATAGTAAATATAAAAGTGTAATCAATGAAGTGATATTTGAGATAAACTCAAAGTGACTATGCTCTCTGCATCCTACTTTCGAAGATTGGTTCACCAACTAGTATGGAAGTAAAAATACCAATCAAGGGGCATTTGGCAACCGACATGTAATTAAGCTGGGTGGGTAAGAACAATTCGCCCACCGTTTGAGTGCACCAACAATTGAAGAGGTTTATTACCTCATTATTCGTCTTAACCCATATTTATCATCTTGTTATTTGTGTTAACTTATATTTCTTACCTCGTTATTTGTGTAAACTCCCCTAATCACTCTCTCCTATAATAATTACCAACTCAACTTTCCAAAAATAATTCCAACCAAATACCTCTAAAACATTTTTTCGATTCTCTTATGTATAAGAAGTTGGTAAAATAACTTGTGTTTTAGAGCATATTTTTGGCTTTCAGAAGTGTTAGTTTCTATGTTTATTTATCTATTTTTCTGGGTTCAGAGTTCTTGACATAATGCGAAGTGATGCAGAGAAAGATCCTGCTAGTAATCCAAATGCATTGCCTGCCAGACTCTTAATCAATCAGGTCTGGTAACTAATAATTCTAGAAGAGGATTTTTCTTTTAAGATATGTTTGTAATAGCTACTTGCATGCGTTTCCTCTAATGGATTCATATATCTGTGGCTGCAATTAGGTCGATCGTAAACTGGAGAAGCAAACAGTCATGACATCAGTGCATGGTTTTACTTATCTTGGTGTCAAAGATTAGATTAAAAAAAGGTTGCAAGAAAGAGCATCCATCGAGGATGAACGACAGTTATTTGTGGCTTCTTGCTATGCAGCTAAAGTGAGTCGATAAACTGCAATATGCTTTGAGAAAATTTGACACTTGTACCCATGGCATTCATGTGAACAGTGTGTTGCTTCTTTTTAAATTACTTCTCTTTCAATTCCAAGAAAGTTGTGACTTTGTGTGTGTCTGAACATTCCGCTGATTTGAGTTCTCGTGCAGACTACCTTGACTGCTATGGGGTAAATGTTTGAAGCAGCAAGAAGTATCATGAGCTGGCTTGGTGAATGTGAAAAGGTGCATTTTCTCAGTTGGTGACATTGTGGTCCTCTCATTATTTTAGTTATTTTGATAAAGTTTGTAGTCACCAACTTGAAGAAAGGACTTTTCAGTTTTCATTGATTATTTTATTATAGATAACATGAGGTTCCTCTCAAAATCAATTGACAATGAGAGAGATAGTCTACCTATTTCTTAAAGAGTGTGAAGTCCCTTGATTTCTTCAAAATGGGATCTTCAATATGCCTCCTCAAGATGGTGCCTCTTTTGGAGAAGAGAATGCAAAGAAAAAGGAAAGTGTGAACTTTTTGTTTTGTTCTGTTTTATTATTTTTTTGGTCAAGGAACACTGTGTATATGTATATAAAAAAATATTTAGTTACATGGAGAAGGAAATAGGTTTTATGAGTATGGAGAAATGGAGAAAGATAATGCACTTTATTGTTATTAATTTTTAACTCTAAATATAGAACTACACTCATGCATCTACCTTCCAGTTTGAACACAAAGAATCTCCCACCTTGTCCACATCCTTCAGTAATCAGTACAGTCAATAAATCGTGGAACTCCTCACTCAGCCTCCCAATCTATTAAATTTCTTCTAATTAACTTGATTTTATAACTATGCTATGAATATGATATTATCTGTATTTCAGTAATTGTTCTTCTGCCTTCTTGCTTATCAATTGGTATGTAGTTTTTCTATGAACGTTCAGACATTTAATTTTCCACGGGTAATAGATTCAGAAAATCAGCCAGTTCGATGGATCACTCCTCTTGGATTGTGCTCGATCACAATATTCTGCCAGAGAGAGACACAAAATACACAAAGAGAATAACAATAATGAGGAATTATATTGATAGTATTTCAACACAAAAGATTATACTAAGGATGCAACCAAGTAAGATGGTTTTACTCTCCACAATGAACTAGTGTTCATCCACAATATATCCCATCAATTAAGATAACTAACCCTAGCACAAAACTCTCAAATATATACTAACATTCCCTCCAACCCTGTCAGAACAAAGGATCCTTTCAACTACCCTTTTGTCTATGTTAAAAATCCATTTTTACCCCTTATCTAGTACAGTTGCTTAATGGGAGGCCTAGCAATACCCCCATGGAGAAGAGACACCTTGTCCTTAAGGTGGAAATCTGGAAATTGAGAGTTGAGAACAGAGTATGTCTCCCAAGTCGCTTCATGAGAAGGTTGATCTTTCCAAGAGACTAAACACTCCCAGTCGCTTTCAGTCTCATTCCACCTCACCTAGGCTACCTTTTCTGGTTCTAAGACCCACTCCAATTGGTCTTTCAGTAAGGATGGTTGAATGTCGTGTTTTTCGCCCACAACCTTTTTCAATTGAGAGATATGAAAAATCGGGTGGATTTTTGCTGATGTCGGCAGATTCAGCAAATAAGCTACCTCCCCCACACGCCCCAGAATTTCATATGAGCCAAAAAATTTGGGTGAGTTTTTCACAGCGCTTCTTCGCCAGAGATTGTTGTCTATATGGTTGAATTTTTAGGTATACCTAGTCTCCCACATCGTAAACAACATCTCTATGGTGCACATCGGCGAACTTCTTCATTTGCTGCTGAGCATGCTGTAAATGAGACTTCAATGTTGCCAACATATCATCTCGGGCTTAAAGGTGTTGCTCAACAGAATCGTTGGGAGTGGACTGTGAGTGGCCATATGAAATGATGGGAGGAGGTGGACGTCCATAAACAACGGCATACGAGGTGGTTTTAATGGACGCATGGTGAGTGGTGTTGTACCAATATTCTGCTCACGCCAACTTCTCACTCCACGTCTTAGGTTTTTCGCTGCAGAGACATCGTAAATAAATTTCCAAACATTTGTTAACCACTTTCGTTGCCCGTCAGTTTGTGGGTGGTACGCTGTGCTACGCTTTAACTGAGTTCCTTGTAGCCGGAATATTTCTTTCAAAAAATTACTCAAAAAGATTCTGTCTCGATCAGACACAATGGATAGTGGGTATCCATGGTATCCATGTAGTGGAACTACCTCTCTAAGAAAAACCATGGCCACTGTCTTCGTTGGGAAGGGATGGCCCAAGGGCAAGAAATGTGCATATTTGCTAAGACAATCCACCACCACCAACACTGTGTTGTATCCCTTTGACCGTGGCAGCCCTTCCACGAAGTCCATGGAAATATCCTCTCAAATACGATCGGGGATAGGTAATGGTTGTAACAACCCTGTCGGAGATAACGCTTAAATTTTATTTTGTTGGCACACATGACAATTGTCACGCCCAAAATTTTGCCCTACAAATTTCCTCGTGAATAAGGACCCCTTAGCACAACCAAGGGGAGCCCAAGACAACCACAAGACCCTTAAATCCAAAATTGCTGCCCAAAAGTCCAAAAACGTCACTTGACTCGGAGGTGTCAACATGGCACGCAGGCCACGCCCAGCTGACAACACGATGGGCGCGCCTGCCTGCACACAGCCACAGACGCACTACAAGCACACGGGTGACATGCCACACGCGCATGGGGGCATGGGCATACCCAGCCCATGCACGCCGAGCACAGCAGGCATGCCGCGCGCGCCAACCAAACATAGCAGACTGGCCGTGCGCGCAATGCACGCGGACATGCCAGGCGCGCGCATCGGATAGGCCACGCACGCGCGGATATGCCAGGTGCGCGCGAGGTGCGCGCAACGGACATGCTAGGCGCATCGGACAGGCCACGCGCGCGCGGATATACCAGGCGTGCGCGAGAGATGCGCGCAACAGACAGACAGGACGCGCGCGCGCTACAGAAGCCACGCTCGGGAAGGCTGACGAACATTCCAGAACTTTCCATGACGATCAACGAATACAGGAAAGACCGGGAAGGCTCTAGAACGCGCGCGCGAGCTTCGACCGGCTTGCGAGAGACGATGTCGGTCACCATGCGTCATGAAAACACCAGAAGCGTCTTAACCGACTTTCAAAGGCGGTTTAGGACACCAAAGATGGTCAAGTGTCCCTATAAATACCCCCAAGGGGTCCATTTGAAGGCATCCTCGGAAATCCTCAAATTCTCCAAGTGTTCTTAAGCATTCACTTGTAAAAAGCCTTGTATATTCATTCTCCTTATTAATAAACTCTCATTTCGCCCACTTTGCCTCACTTTGCCTAATTTTCTCCAATTCTAGCAATTCCTAGTGAACCCGAAAACCTCTCTAAAGGCTTACTTTGGTGCAACATTGAGAAAGTTCACCTTAGTGCCGCACGTCGTATTACTTTCAAATAGTAACCCCGTGACAGTTGGTATCAGAGCAACGGTTTCTATACCTAGGTACCATCAAACATTCGCTAGACAATATGTCGACGGAGGAAAAGCACGTATCACCCGAGAAACAAGTCATTGAAGGACCCATTACTCGGGGAAGGAAAGAGCAACATTCTCCAACCCGACGCTCGAAGTCCAAGGGACCGGCTGCAAGGGAGCACGTTGATGCCCGCCTTGCCAACCTCGAGCAAGGTCTGGAGGAGGTTCAGCTCACGGTTGGAAGGCTGGGCGACAATTTTGAAGAGTTGGTCCAGGAGAATGCCGAAGTTACAACCGCTGCGAAGGAACTCATCGAGGATCTGGGACGATCATTTAGAAGGGAACTAAGTGAAGTCGCATCGGCACTAAAGTCACTCATTGAAGGTGAGTTACGGGAACTCCATTCCAAGTATGATTCCCTCGATGCTAAAATAGACTTCGTATGTTCCGAGTGTCGTTCCAAACACGTTACCGGAGCAAGCACTTCGTCCGGTAACCTCTCTACCGCTGCGCAAGGCACCCACACCATCAAAGTGCCTAAACCCGAAGTATACAACGGGACGAGGAACGCCACAACGGTGGACAAATTCCTCTTTGGCCTAGAGCGATATTTCGAGGCACTAGGCGTAAATAACGATGGAGCTCGCATCAACAACGCCCTCACGTACCTAAGAGATGCCGCACAACTATGGTGGCGAAGGAAATACGCCGAAAGGGAACAGGGCCGAAATGCCATCCGGACGTGGGAGCAATTTAAAAGCGAACTAAGGAAACATTTCGTTCCCCACAACGCAGAGATGGAGGTACGAGGTAAGCTCCGACGACTTAGACAAACAGGAAGTATCTTAGATTACGTCAAGGAGTTTACCACCCTCACCTTAGAAATAAATGATCTTTCCGAGAAAGATGCCCTTTTCTATTTTAAAGATGGATTAAAGGAGTGGGTCAAAGTAGAGCTAGATCGCCGCAATGCTCAAACATTGGATGATGCTATTGCGGTAGCTGAGACTCTGGTTGACTATTCCAGTCGACAAAAGAAGGATAACTCGTTCAAGGGCGGAAGAAGTGAAAAGCAGAAGGATCATGTCCGACGAGATAACGGAAAAGGGAGGCCATTCAACAACAAATATGGCAAGACCTCGGGAAATCATAAAGGTGAGTCTTCTAGACCTCCTAAACCCTGCTTTGTCTGTGATGGACCTCATTGGACAAGGGATTGCCCAAATAGAAAAGCCATGAATGCTCTAATGGCTAAACTTAAGGAGACCAATCCAGACGCCACAACTCAGGAAGCCCAAATGGGATCTTTACAATTCCTGAATGCGGTAACAACAGGCTCCAAAGAAGGAGACCAAAAAGGAGGGTTACTTTATGTTGATATCATAATCAACGGAGGGTTAACATCAGCAATGCTAGACACTGGAGCTACCCATAACTTCATGGATGAGAAGGTAGCCAAGAAGCTTGAGCTCCAACTGATAAAAGAGACAGGAACAGTTAAGACGGTCAACAGGGAAGCTCAAATCATAGCCGGAATTGCCAAAGATGTGACAGTGAAGATTGGCACATGGCAAGGGAAGCAGGACTTCACCGTACTACCTATGGACGATTTCCAAATAGTCCTTGGACTGACATTCTTCAACCAGGTAACCTCCATACTCGACGCTCATAAGCAGTCTCTTACTATTATTGATGGGGCGATGACAACCATACCGTTGAAGAAAGGAAAACCCACCATAATGCTCTCAGCCACGCAATTCAAAAGAGCAGTCACAAAAGGAGACTGTTATGTGGCCACAGTACGACAGTCTAAGGCAGAGGTGGAGAAAGGAAATCAAACCACAGTACCCAACTACATCCAGACGATCCTTGAAGAATACAAGGACGTAATGCCGGCAGAATTACCAAAAAAGCTTCCTCCCAGGAGAGAGGTGGACCACGAGATAAAGACCGAAGTTGGGGTCAAACCACCAGCAATGACCCCGTATAGGATGGCCCCTCCGGAACTAGAGGAATTGAAAAGGCAGTTGAAGGAATTGCTCGACGCAGGTTATATCCAACCGTCAAAAGCCCCTTATGGCGCACCGATACTCTTTCAAAAGAAGAAAGACGGATCATTGAGGCTGTGTATAGATTACCGAGCTTTAAACAAGATCACCATCAAGAACAAGTACCCCATACCACTGATAGAAGATTTATTCGATCAACTTGGAAACGCCCAATGGTTCAGCAAGATCGACTTAAGATCCGGGTACTACCAAGTTCGTATCAAAGAAGGCGACGAACCCAAAACAACATGTGTGACCAGGTACGGTGCATACGAGTTCCTAGTAATGCCATTTGGATTAACAAACGCACCAGCCACTTTCTGCACATTAATGAACAAATTATTTCAACCGTTCCTGGATAAGTTCGTAGTGGTCTACCTGGACGTCATTGTAGTATATAGCAAGACTCTGCAGGAACATGCACAACACTTAAGACAAGTCTTCCAGGTGCTACGTGAGAATGAGCTATACATAAAACTGGAAAAATGTTCATTCGCTCAACAAGAAGTGGAATTCCTGGGACACAAAATTAAAGGAGGCAAGCTCATGATGGAAACCAAAAAGGTACGCACCATCCAGGACTGAAAACCTCCTACTAAAATCCCGGAACTAAGGTCATTTCTCGGGTTCGTCAACTACTATAGAAAATTCATAAAGGGGTACTCTGCCATAGCAGCACCTCTTACAAACCTACTCAAGAAGAACCAACCTTGGGTATGGACAAAGGACTGTCAACAAGCTTTTGAGAAACTCAAAAGAGTTGTCTCAAGAGAACCAGTGATGGTGATAGCAGACCACAATAAACACTTCGAAGTACATACTGATGCCTCAGACTTTGCCATAGGAGGGGTTCTAATGCAGGAAGGCTATCCCGTGGCTTACGAAAGTCGTAAGCTAAACGAAACAGAAAGAAGGTATACTGTCCAGGAGAAAGAGATGACAGCCATCGTTCACTGCCTACGGACATGGAGACATTATTTACTGGAGAGCAAGTTCACGGTGATGACCGATAATGTAGCAACCAGCTACTTTCAGACCCAGAAAAAGCTATCTCCAAAGCAGGCCCGTTGGCAAGATTTCCTGGCAGAATTTGATTTTAAGTTAGAATATAAACCAGGCAGGACAAATGTCGTTGCAGATGCCCTAAGCCGAAAAGCTGAACTTGCAAGCCTCAATGAAAGCACTCCCATCAACAACTCCCTGGAGAGAATTAAGGAAAAGTCATATCAAGCTCCTACGGCAATAATAACAGAATTTGACAAACGATTCAAAGAAATTCTGGCTGAAAGGAGAATAAGAAGAAGGGGAGTACCAACCTATTCAGAGTATTTGGTCTTGTGGGAAGGACTGTCAGAAAGCGAAGCAAGTTGGGAAAAAGAAGATCAACTCTGGCAATTTCACGAAGAAATAGAGAAATTTAAGGAAAGCGCAACGGGGACGTTGCGAAATTGA

mRNA sequence

ATGAAGTCTTTATTCCTTGGTTGGTTCAAACCCTTGCGTGATGCAATTGTTGCAGTGCAAGAATTTTGCAAGGATAAGAAGTGTAGATCGAGTCATGCTCCTTATTTCGATCTTCTACCGGCATATAAGATGGCAGTGATTACAATGCATAAGTTAATGGGGTTGCTGATGAGTGGTACTGTAGGAAACGATAGTGTCAGGGTAGTCCAAGCTGCTTCTGAGATAGGAGAAGCAATTGAACATGAGGAAACTAGCAAGAGATATGATGTTATTGAATGTAATTCACTTGTTCGCCGAGGCCTGGGGAAAACTCTATGTAGAATCATATACTGTAGACTTAATGCTAGGCACATGGTTGGTTCGTATATGCCTATGTTGGTGCCTCATCTTAATTGGACAGGGTATGACAACGGGGCATACTTATTCCTACCATCATATGTTATGCGAATACATGGGGCAAAACAGCAACGTGAAGCAGTTAAAAGGGCTCCAAGAAAGCAACTAGAGCCTATTTTTAAGTGTTTCATGGCGTTCACCTTTGAAGTTGTGATGCAATCAGAAGGAGCTTTTAAGAGTTGGCCCTTAGGAAAAAAATTCAACTTGAAGTTTCTTTATGAGTTCCAGTATGCTGGTGGTGTGGACAAGTTATCTTATAAGGAACGAATATCATTTACCGAGAACCATTTGGATGAGATTTTTTATTCTGCAAACATGCCTCTTGAAGGACGGGGTTGGTGGTTGGGTGCAGAGGATCCTTTTCAGTGCTTGGCAGTGTGTATTAATCTGTCAGAGTCATTAAGAAGTCCCTCGACGGAAACAACTATTTCCCATATACCTGTACATCAGTATGGAAGTAAAAATACCAATCAAGGGGCATTTGGCAACCGACATGTAATTAAGCTGGGTGGAGTTCTTGACATAATGCGAAGTGATGCAGAGAAAGATCCTGCTAGTAATCCAAATGCATTGCCTGCCAGACTCTTAATCAATCAGATTAAAAAAAGGTTGCAAGAAAGAGCATCCATCGAGGATGAACGACAGTTATTTGTGGCTTCTTGCTATGCAGCTAAAACTACCTTGACTGCTATGGGATTCAGAAAATCAGCCAGTTCGATGGATCACTCCTCTTGGATTGTGCTCGATCACAATATTCTGCCAGAGAGAGACACAAAATACACAAAGAGAATAACAATAATGAGGAATTATATTGATAGTATTTCAACACAAAAGATTATACTAAGGATGCAACCAAGTACCATCAAACATTCGCTAGACAATATGTCGACGGAGGAAAAGCACGTATCACCCGAGAAACAAGTCATTGAAGGACCCATTACTCGGGGAAGGAAAGAGCAACATTCTCCAACCCGACGCTCGAAGTCCAAGGGACCGGCTGCAAGGGAGCACGTTGATGCCCGCCTTGCCAACCTCGAGCAAGGTCTGGAGGAGGTTCAGCTCACGGTTGGAAGGCTGGGCGACAATTTTGAAGAGTTGGTCCAGGAGAATGCCGAAGTTACAACCGCTGCGAAGGAACTCATCGAGGATCTGGGACGATCATTTAGAAGGGAACTAAGTGAAGTCGCATCGGCACTAAAGTCACTCATTGAAGGTGAGTTACGGGAACTCCATTCCAAGTATGATTCCCTCGATGCTAAAATAGACTTCGTATGTTCCGAGTGTCGTTCCAAACACGTTACCGGAGCAAGCACTTCGTCCGGTAACCTCTCTACCGCTGCGCAAGGCACCCACACCATCAAAGTGCCTAAACCCGAAGTATACAACGGGACGAGGAACGCCACAACGGTGGACAAATTCCTCTTTGGCCTAGAGCGATATTTCGAGGCACTAGGCGTAAATAACGATGGAGCTCGCATCAACAACGCCCTCACCACTCCCATCAACAACTCCCTGGAGAGAATTAAGGAAAAGTCATATCAAGCTCCTACGGCAATAATAACAGAATTTGACAAACGATTCAAAGAAATTCTGGCTGAAAGGAGAATAAGAAGAAGGGGAGTACCAACCTATTCAGAGTATTTGGTCTTGTGGGAAGGACTGTCAGAAAGCGAAGCAAGTTGGGAAAAAGAAGATCAACTCTGGCAATTTCACGAAGAAATAGAGAAATTTAAGGAAAGCGCAACGGGGACGTTGCGAAATTGA

Coding sequence (CDS)

ATGAAGTCTTTATTCCTTGGTTGGTTCAAACCCTTGCGTGATGCAATTGTTGCAGTGCAAGAATTTTGCAAGGATAAGAAGTGTAGATCGAGTCATGCTCCTTATTTCGATCTTCTACCGGCATATAAGATGGCAGTGATTACAATGCATAAGTTAATGGGGTTGCTGATGAGTGGTACTGTAGGAAACGATAGTGTCAGGGTAGTCCAAGCTGCTTCTGAGATAGGAGAAGCAATTGAACATGAGGAAACTAGCAAGAGATATGATGTTATTGAATGTAATTCACTTGTTCGCCGAGGCCTGGGGAAAACTCTATGTAGAATCATATACTGTAGACTTAATGCTAGGCACATGGTTGGTTCGTATATGCCTATGTTGGTGCCTCATCTTAATTGGACAGGGTATGACAACGGGGCATACTTATTCCTACCATCATATGTTATGCGAATACATGGGGCAAAACAGCAACGTGAAGCAGTTAAAAGGGCTCCAAGAAAGCAACTAGAGCCTATTTTTAAGTGTTTCATGGCGTTCACCTTTGAAGTTGTGATGCAATCAGAAGGAGCTTTTAAGAGTTGGCCCTTAGGAAAAAAATTCAACTTGAAGTTTCTTTATGAGTTCCAGTATGCTGGTGGTGTGGACAAGTTATCTTATAAGGAACGAATATCATTTACCGAGAACCATTTGGATGAGATTTTTTATTCTGCAAACATGCCTCTTGAAGGACGGGGTTGGTGGTTGGGTGCAGAGGATCCTTTTCAGTGCTTGGCAGTGTGTATTAATCTGTCAGAGTCATTAAGAAGTCCCTCGACGGAAACAACTATTTCCCATATACCTGTACATCAGTATGGAAGTAAAAATACCAATCAAGGGGCATTTGGCAACCGACATGTAATTAAGCTGGGTGGAGTTCTTGACATAATGCGAAGTGATGCAGAGAAAGATCCTGCTAGTAATCCAAATGCATTGCCTGCCAGACTCTTAATCAATCAGATTAAAAAAAGGTTGCAAGAAAGAGCATCCATCGAGGATGAACGACAGTTATTTGTGGCTTCTTGCTATGCAGCTAAAACTACCTTGACTGCTATGGGATTCAGAAAATCAGCCAGTTCGATGGATCACTCCTCTTGGATTGTGCTCGATCACAATATTCTGCCAGAGAGAGACACAAAATACACAAAGAGAATAACAATAATGAGGAATTATATTGATAGTATTTCAACACAAAAGATTATACTAAGGATGCAACCAAGTACCATCAAACATTCGCTAGACAATATGTCGACGGAGGAAAAGCACGTATCACCCGAGAAACAAGTCATTGAAGGACCCATTACTCGGGGAAGGAAAGAGCAACATTCTCCAACCCGACGCTCGAAGTCCAAGGGACCGGCTGCAAGGGAGCACGTTGATGCCCGCCTTGCCAACCTCGAGCAAGGTCTGGAGGAGGTTCAGCTCACGGTTGGAAGGCTGGGCGACAATTTTGAAGAGTTGGTCCAGGAGAATGCCGAAGTTACAACCGCTGCGAAGGAACTCATCGAGGATCTGGGACGATCATTTAGAAGGGAACTAAGTGAAGTCGCATCGGCACTAAAGTCACTCATTGAAGGTGAGTTACGGGAACTCCATTCCAAGTATGATTCCCTCGATGCTAAAATAGACTTCGTATGTTCCGAGTGTCGTTCCAAACACGTTACCGGAGCAAGCACTTCGTCCGGTAACCTCTCTACCGCTGCGCAAGGCACCCACACCATCAAAGTGCCTAAACCCGAAGTATACAACGGGACGAGGAACGCCACAACGGTGGACAAATTCCTCTTTGGCCTAGAGCGATATTTCGAGGCACTAGGCGTAAATAACGATGGAGCTCGCATCAACAACGCCCTCACCACTCCCATCAACAACTCCCTGGAGAGAATTAAGGAAAAGTCATATCAAGCTCCTACGGCAATAATAACAGAATTTGACAAACGATTCAAAGAAATTCTGGCTGAAAGGAGAATAAGAAGAAGGGGAGTACCAACCTATTCAGAGTATTTGGTCTTGTGGGAAGGACTGTCAGAAAGCGAAGCAAGTTGGGAAAAAGAAGATCAACTCTGGCAATTTCACGAAGAAATAGAGAAATTTAAGGAAAGCGCAACGGGGACGTTGCGAAATTGA

Protein sequence

MKSLFLGWFKPLRDAIVAVQEFCKDKKCRSSHAPYFDLLPAYKMAVITMHKLMGLLMSGTVGNDSVRVVQAASEIGEAIEHEETSKRYDVIECNSLVRRGLGKTLCRIIYCRLNARHMVGSYMPMLVPHLNWTGYDNGAYLFLPSYVMRIHGAKQQREAVKRAPRKQLEPIFKCFMAFTFEVVMQSEGAFKSWPLGKKFNLKFLYEFQYAGGVDKLSYKERISFTENHLDEIFYSANMPLEGRGWWLGAEDPFQCLAVCINLSESLRSPSTETTISHIPVHQYGSKNTNQGAFGNRHVIKLGGVLDIMRSDAEKDPASNPNALPARLLINQIKKRLQERASIEDERQLFVASCYAAKTTLTAMGFRKSASSMDHSSWIVLDHNILPERDTKYTKRITIMRNYIDSISTQKIILRMQPSTIKHSLDNMSTEEKHVSPEKQVIEGPITRGRKEQHSPTRRSKSKGPAAREHVDARLANLEQGLEEVQLTVGRLGDNFEELVQENAEVTTAAKELIEDLGRSFRRELSEVASALKSLIEGELRELHSKYDSLDAKIDFVCSECRSKHVTGASTSSGNLSTAAQGTHTIKVPKPEVYNGTRNATTVDKFLFGLERYFEALGVNNDGARINNALTTPINNSLERIKEKSYQAPTAIITEFDKRFKEILAERRIRRRGVPTYSEYLVLWEGLSESEASWEKEDQLWQFHEEIEKFKESATGTLRN

Homology

[Close]

BLAST of PI0002425 vs. ExPASy Swiss-Prot
Match: Q93Y94 (DNA-directed RNA polymerase 1, mitochondrial OS=Nicotiana sylvestris OX=4096 GN=RPOT1 PE=2 SV=1)

HSP 1 Score: 320.9 bits (821), Expect = 3.8e-86
Identity = 232/650 (35.69%), Postives = 280/650 (43.08%), Query Frame = 0


Query: 1   MKSLFLGWFKPLRDAIVAVQEFCKDKKCRSSHAPYFDLLPAYKMAVITMHKLMGLLMSGT 60
           MKSLFLGWF+PLRDAI A Q+ C + K R ++AP+FD LPA  MAVITMHKLMGLLM+G 
Sbjct: 207 MKSLFLGWFEPLRDAIAAEQKLCDEGKNRGAYAPFFDQLPAEMMAVITMHKLMGLLMTGG 266

Query: 61  VGNDSVRVVQAASEIGEAIEHE-------------------------------------- 120
            G  S RVVQAAS IGEAIEHE                                      
Sbjct: 267 -GTGSARVVQAASHIGEAIEHEARIHRFLEKTKKSNALSGDLEDTPGDIMKERERVRKKV 326

Query: 121 ------------------------------------------------------------ 180
                                                                       
Sbjct: 327 KILMKKQKLQQVRKIVKQQDDEKPWGQDNLVKVGCRLIQILMETAYIQPPNDQLDDCPPD 386

Query: 181 ---------------ETSKRYDVIECNSLVRRGLGKTLCRIIYCRLNARHMVGSYMPMLV 240
                          + S+RY VI+C+ LVR+GL KT          ARHMV  YMPMLV
Sbjct: 387 IRPAFVHTLKTVETMKGSRRYGVIQCDPLVRKGLDKT----------ARHMVIPYMPMLV 446

Query: 241 PHLNWTGYDNGAYLFLPSYVMRIHGAKQQREAVKRAPRKQLEPIFKCF------------ 300
           P  +W GYD GAYLFLPSY+MR HGAKQQREAVKR P+KQLEP+F+              
Sbjct: 447 PPQSWLGYDKGAYLFLPSYIMRTHGAKQQREAVKRVPKKQLEPVFQALDTLGNTKWRLNR 506

Query: 301 ------------------------MAFTFEVVMQSEGAFKSW------------------ 360
                                   +    E   + E   + W                  
Sbjct: 507 KVLGIVDRIWASGGRLADLVDREDVPLPEEPDAEDEAQIRKWKWKVKGVKKENCERHSQR 566

Query: 361 --------------------------------------------------------PLGK 379
                                                                   PLGK
Sbjct: 567 CDIELKLAVARKMKDEDGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGK 626

[Close]

BLAST of PI0002425 vs. ExPASy Swiss-Prot
Match: Q8L6J5 (DNA-directed RNA polymerase 1B, mitochondrial OS=Nicotiana tabacum OX=4097 GN=RPOT1-TOM PE=2 SV=2)

HSP 1 Score: 320.5 bits (820), Expect = 4.9e-86
Identity = 236/653 (36.14%), Postives = 283/653 (43.34%), Query Frame = 0


Query: 1   MKSLFLGWFKPLRDAIVAVQEFCKDKKCRSSHAPYFDLLPAYKMAVITMHKLMGLLMSGT 60
           MKSLFLGWF+PLRDAI A Q+ C + K R ++AP+FD LPA  MAVITMHKLMGLLM+G 
Sbjct: 207 MKSLFLGWFEPLRDAIAAEQKLCDEGKNRGAYAPFFDQLPAEMMAVITMHKLMGLLMTGG 266

Query: 61  VGNDSVRVVQAASEIGEAIEHE-------------------------------------- 120
            G  S RVVQAAS IGEAIEHE                                      
Sbjct: 267 -GTGSARVVQAASYIGEAIEHEARIHRFLEKTKKSNALSGDLEETPGDMMKERERLRKKV 326

Query: 121 ------------------------------------------------------------ 180
                                                                       
Sbjct: 327 KILMKKQKLRQVRKIVKQQDDEKPWGQDNLVKVGCRLIQILMETAYIQPPNDQLDDGPPD 386

Query: 181 ---------------ETSKRYDVIECNSLVRRGLGKTLCRIIYCRLNARHMVGSYMPMLV 240
                          + S+RY VI+C+ LVR+GL KT          ARHMV  YMPMLV
Sbjct: 387 IRPAFVHTLKTVETMKGSRRYGVIQCDPLVRKGLDKT----------ARHMVIPYMPMLV 446

Query: 241 PHLNWTGYDNGAYLFLPSYVMRIHGAKQQREAVKRAPRKQLEPIF--------------- 300
           P  +W GYD G YLFLPSY+MR HGAKQQREAVKR P+KQLEP+F               
Sbjct: 447 PPQSWLGYDKGGYLFLPSYIMRTHGAKQQREAVKRVPKKQLEPVFQALDTLGNTKWRVNR 506

Query: 301 -----------------------------------------------------------K 360
                                                                      +
Sbjct: 507 KVLGIVDRIWASGGRLADLVDREDVPLPEAPDTEDEAEIRKWKWKVKGVKKENCERHSQR 566

Query: 361 CFMAFTFEVV--MQSEGAF----------KSWPLGKKFN--------------------- 379
           C +     V   M+ E  F          +++P+    N                     
Sbjct: 567 CDIELKLAVARKMKDEDGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGT 626

[Close]

BLAST of PI0002425 vs. ExPASy Swiss-Prot
Match: Q8VWF8 (DNA-directed RNA polymerase 2, chloroplastic/mitochondrial OS=Nicotiana sylvestris OX=4096 GN=RPOT2 PE=2 SV=2)

HSP 1 Score: 280.0 bits (715), Expect = 7.4e-74
Identity = 213/639 (33.33%), Postives = 268/639 (41.94%), Query Frame = 0


Query: 1   MKSLFLGWFKPLRDAIVAVQEFCKDKKCRSSHAPYFDLLPAYKMAVITMHKLMGLLMSGT 60
           +KSLFLGWF+PLRD I   QE C   K ++++A YF  LPA  MAVITMHKLMGLLM+G 
Sbjct: 223 VKSLFLGWFEPLRDKIAEEQELCSQGKSKAAYAKYFYQLPADMMAVITMHKLMGLLMTGG 282

Query: 61  VGNDSVRVVQAASEIGEAIEHE-------------------------------------- 120
             + + RVVQAA  IG+AIE E                                      
Sbjct: 283 -DHGTARVVQAALVIGDAIEQEVRIHNFLEKTKKQKAEKDKQKEDGEHVTQEQEKLRKKV 342

Query: 121 ------------------------------------------------------------ 180
                                                                       
Sbjct: 343 TNLMKKQKLRAVGQIVRRQDDSKPWGQDARAKVGSRLIDLLLQTAYIQPPANQLAVDPPD 402

Query: 181 -----------------ETSKRYDVIECNSLVRRGLGKTLCRIIYCRLNARHMVGSYMPM 240
                              S+RY +I+C+ LV +GL +T          ARHMV  YMPM
Sbjct: 403 IRPAFVHSVRTVAKETKSASRRYGIIQCDELVFKGLERT----------ARHMVIPYMPM 462

Query: 241 LVPHLNWTGYDNGAYLFLPSYVMRIHGAKQQREAVKRAPRKQLEPIF------------- 300
           LVP + WTGYD G +L+LPSYVMR HGA+QQREAVKRA R QL+P+F             
Sbjct: 463 LVPPVKWTGYDKGGHLYLPSYVMRTHGARQQREAVKRASRNQLQPVFEALDTLGNTKWRI 522

Query: 301 ------------------------------------------------------------ 360
                                                                       
Sbjct: 523 NKRVLSVVDRIWAGGGRLADLVDRDDAPLPEEPDTEDEALRTKWRWKVKSVKKENRERHS 582

Query: 361 -KCFMAFTFEVV--MQSEGAF----------KSWPLGKKFN------------------- 365
            +C +     V   M+ E +F          +++P+    N                   
Sbjct: 583 QRCDIELKLAVARKMKDEESFFYPHNVDFRGRAYPMHPHLNHLGSDICRGVLEFAEGRPL 642

[Close]

BLAST of PI0002425 vs. ExPASy Swiss-Prot
Match: Q8L6J3 (DNA-directed RNA polymerase 2B, chloroplastic/mitochondrial OS=Nicotiana tabacum OX=4097 GN=RPOT2-TOM PE=2 SV=2)

HSP 1 Score: 278.5 bits (711), Expect = 2.2e-73
Identity = 212/642 (33.02%), Postives = 265/642 (41.28%), Query Frame = 0


Query: 1   MKSLFLGWFKPLRDAIVAVQEFCKDKKCRSSHAPYFDLLPAYKMAVITMHKLMGLLMSGT 60
           +KSLFLGWF+PLRD I   QE C   K ++++A Y   LPA  MAVITMHKLMGLLM+G 
Sbjct: 224 VKSLFLGWFEPLRDKIAEEQELCSQGKSKAAYAKYLYQLPADMMAVITMHKLMGLLMTGG 283

Query: 61  VGNDSVRVVQAASEIGEAIEHE-------------------------------------- 120
             + + RVVQAA  IG+AIE E                                      
Sbjct: 284 -DHGTARVVQAALVIGDAIEQEVRIHNFLEKTKKQKAEKDKQKEDGEHVTQEQEKLRKKV 343

Query: 121 ------------------------------------------------------------ 180
                                                                       
Sbjct: 344 TNLMKKQKLRAVGQIVRRQDDSKPWGQDAKAKVGSRLIELLLQTAYIQPPANQLAVDPPD 403

Query: 181 -----------------ETSKRYDVIECNSLVRRGLGKTLCRIIYCRLNARHMVGSYMPM 240
                              S+RY +I+C+ LV +GL +T          ARHMV  YMPM
Sbjct: 404 IRPAFLHSVRTVAKETKSASRRYGIIQCDELVFKGLERT----------ARHMVIPYMPM 463

Query: 241 LVPHLNWTGYDNGAYLFLPSYVMRIHGAKQQREAVKRAPRKQLEPIF------------- 300
           LVP + WTGYD G +L+LPSYVMR HGA+QQREAVKRA R QL+P+F             
Sbjct: 464 LVPPVKWTGYDKGGHLYLPSYVMRTHGARQQREAVKRASRNQLQPVFEALDTLGSTKWRI 523

Query: 301 ------------------------------------------------------------ 360
                                                                       
Sbjct: 524 NKRVLSVIDRIWAGGGRLADLVDRDDAPLPEEPDTEDEALRTKWRWKVKSVKKENRERHS 583

Query: 361 -KCFMAFTFEV---VMQSEGAF---------KSWPLGKKFN------------------- 365
            +C +     V   +   EG F         +++P+    N                   
Sbjct: 584 QRCDIELKLAVARKMKDEEGFFYPHNVDFRGRAYPMHPHLNHLGSDICRGVLVFAEGRPL 643

[Close]

BLAST of PI0002425 vs. ExPASy Swiss-Prot
Match: P92969 (DNA-directed RNA polymerase 1, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=RPOT1 PE=2 SV=1)

HSP 1 Score: 266.2 bits (679), Expect = 1.1e-69
Identity = 205/643 (31.88%), Postives = 261/643 (40.59%), Query Frame = 0


Query: 1   MKSLFLGWFKPLRDAIVAVQEFCKDKKCRSSHAPYFDLLPAYKMAVITMHKLMGLLMSGT 60
           MKSLFLGWF+P+R+AI    +  K KK +  +AP+ + LPA KMAVITMHK+MGLLM+  
Sbjct: 173 MKSLFLGWFEPVRNAIQDDLDTFKIKKGKIPYAPFMEQLPADKMAVITMHKMMGLLMTNA 232

Query: 61  VGNDSVRVVQAASEIGEAIEHE-------------------------------------- 120
            G   V++V AA++IGEA+E E                                      
Sbjct: 233 EGVGIVKLVNAATQIGEAVEQEVRINSFLQKKNKKNATDKTINTEAENVSEEIVAKETEK 292

Query: 121 ------------------------------------------------------------ 180
                                                                       
Sbjct: 293 ARKQVTVLMEKNKLRQVKALVRKHDSFKPWGQEAQVKVGARLIQLLMENAYIQPPAEQFD 352

Query: 181 ----------------------ETSKRYDVIECNSLVRRGLGKTLCRIIYCRLNARHMVG 240
                                 +TS+RY  IEC+ LV +GL K          +ARHMV 
Sbjct: 353 DGPPDIRPAFKQNFRTVTLENTKTSRRYGCIECDPLVLKGLDK----------SARHMVI 412

Query: 241 SYMPMLVPHLNWTGYDNGAYLFLPSYVMRIHGAKQQREAVKRAPRKQLEPIFKCF----- 300
            Y+PML+P  NWTGYD GA+ FLPSYVMR HGAKQQR  +KR P++QLEP+++       
Sbjct: 413 PYLPMLIPPQNWTGYDQGAHFFLPSYVMRTHGAKQQRTVMKRTPKEQLEPVYEALDTLGN 472

Query: 301 -------------------------------MAFTFEVVMQSEGAFKSW----------- 360
                                          +    E   + +  FK+W           
Sbjct: 473 TKWKINKKVLSLVDRIWANGGRIGGLVDREDVPIPEEPEREDQEKFKNWRWESKKAIKQN 532

Query: 361 ------------------------------------------------------------ 364
                                                                       
Sbjct: 533 NERHSQRCDIELKLEVARKMKDEEGFYYPHNVDFRGRAYPIHPYLNHLGSDLCRGILEFC 592

[Close]

BLAST of PI0002425 vs. ExPASy TrEMBL
Match: A0A6J1HS83 (DNA-directed RNA polymerase OS=Cucurbita maxima OX=3661 GN=LOC111467347 PE=3 SV=1)

HSP 1 Score: 377.5 bits (968), Expect = 1.3e-100
Identity = 272/662 (41.09%), Postives = 299/662 (45.17%), Query Frame = 0


Query: 1   MKSLFLGWFKPLRDAIVAVQEFCKDKKCRSSHAPYFDLLPAYKMAVITMHKLMGLLMSGT 60
           MKSLFLGWF+PLRDAI A QEF KDKK R SHAPYFDLLPA  MAVITMHKLMGLLM+ +
Sbjct: 178 MKSLFLGWFEPLRDAIAADQEFFKDKKTRVSHAPYFDLLPADMMAVITMHKLMGLLMTNS 237

Query: 61  VGNDSVRVVQAASEIGEAIEHE-------------------------------------- 120
            GN SVRVVQAA +IGEAIEHE                                      
Sbjct: 238 GGNSSVRVVQAACQIGEAIEHEVRIHKFFEKTKKKNSNEKTTEGDTEPVVEDQEKLAKQQ 297

Query: 121 ------------------------------------------------------------ 180
                                                                       
Sbjct: 298 DKLRKKVTNLMKKQKLRQVRMIVKEHDDLKPWGQDAHVKVGCRLIQLLIETAYIQPPIDQ 357

Query: 181 ------------------------ETSKRYDVIECNSLVRRGLGKTLCRIIYCRLNARHM 240
                                   +TS+RY VIEC+ LVRRGL KT          ARHM
Sbjct: 358 LGEGPPDIRPAFVHTLKTITKEAQKTSRRYGVIECDPLVRRGLEKT----------ARHM 417

Query: 241 VGSYMPMLVPHLNWTGYDNGAYLFLPSYVMRIHGAKQQREAVKRAPRKQLEPIFKCF--- 300
           V  YMPMLVP L WTGYD GAYLFLPSYVMRIHGAKQQREAVKR P+KQLEP+F+     
Sbjct: 418 VIPYMPMLVPPLYWTGYDKGAYLFLPSYVMRIHGAKQQREAVKRVPKKQLEPVFEALDTL 477

Query: 301 ---------------------------------MAFTFEVVMQSEGAFKSWPLGKK---- 360
                                            +    E  ++ E   + W    K    
Sbjct: 478 GRTKWRVNKRILSIIDRIWASGGRLADLVDREDVPLPEEPTVEDEAEIRKWKWKVKAAKK 537

Query: 361 -------------------------------FNLKF---------------------LYE 379
                                           NL F                     + E
Sbjct: 538 ENSERHSQRCDIELKLAVARKMKEEEGFYYPHNLDFRGRAYPMHPYLNHLGSDMCRGILE 597

[Close]

BLAST of PI0002425 vs. ExPASy TrEMBL
Match: A0A6J1D747 (DNA-directed RNA polymerase OS=Momordica charantia OX=3673 GN=LOC111017540 PE=3 SV=1)

HSP 1 Score: 374.4 bits (960), Expect = 1.1e-99
Identity = 261/646 (40.40%), Postives = 293/646 (45.36%), Query Frame = 0


Query: 1   MKSLFLGWFKPLRDAIVAVQEFCKDKKCRSSHAPYFDLLPAYKMAVITMHKLMGLLMSGT 60
           +KSLFLGWF+PLRDAI A QE+CKDKK R SHAPYFDL+PA  MAVITMHKLMGLLM+ +
Sbjct: 177 VKSLFLGWFEPLRDAIAADQEYCKDKKNRVSHAPYFDLIPADMMAVITMHKLMGLLMTNS 236

Query: 61  VGNDSVRVVQAASEIGEAIEHE-------------------------------------- 120
            GN SVRVVQAA +IGEAIEHE                                      
Sbjct: 237 GGNGSVRVVQAACQIGEAIEHEVRIHKFFEKTKKKNVNEKNTEAEADPVAEEQEKLAKEQ 296

Query: 121 ------------------------------------------------------------ 180
                                                                       
Sbjct: 297 DKLRKKVTKLMKKQKLQQVRMIVKEQDDLKPWGQDAHVKVGCRLMQLLMETAYIQPPIDQ 356

Query: 181 ------------------------ETSKRYDVIECNSLVRRGLGKTLCRIIYCRLNARHM 240
                                   +TS+RY VIEC+ LVRRGL KT          ARH 
Sbjct: 357 LGNGPPDIRPAFVHTLKTITREAQKTSRRYGVIECDPLVRRGLEKT----------ARHT 416

Query: 241 VGSYMPMLVPHLNWTGYDNGAYLFLPSYVMRIHGAKQQREAVKRAPRKQLEPIFKCF--- 300
           V  Y+PMLVP LNWTGYD GAYLFLPSYVMRIHGAKQQREAVKRAP+KQLEP+F+     
Sbjct: 417 VIPYLPMLVPPLNWTGYDKGAYLFLPSYVMRIHGAKQQREAVKRAPKKQLEPVFEALDTL 476

Query: 301 ---------------------------------MAFTFEVVMQSEGAFKSW--------- 360
                                            +    E  +  E   + W         
Sbjct: 477 GRTKWRVNKRVLSVIDRIWASGGRLADLVDREDVPLPEEPNVDDEAEIRKWKWKVKAAKK 536

Query: 361 ------------------------------------------------------------ 365
                                                                       
Sbjct: 537 ENSERHSQRCDIELKLAVARKMKEEDGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGVLE 596

[Close]

BLAST of PI0002425 vs. ExPASy TrEMBL
Match: A0A6J1FZC4 (DNA-directed RNA polymerase OS=Cucurbita moschata OX=3662 GN=LOC111449299 PE=3 SV=1)

HSP 1 Score: 374.0 bits (959), Expect = 1.4e-99
Identity = 271/662 (40.94%), Postives = 301/662 (45.47%), Query Frame = 0


Query: 1   MKSLFLGWFKPLRDAIVAVQEFCKDKKCRSSHAPYFDLLPAYKMAVITMHKLMGLLMSGT 60
           MKSLFLGWF+PLRDAI A QEFCK KK R SHAPYFDLLPA  MAVITMHKLMGLLM+ +
Sbjct: 178 MKSLFLGWFEPLRDAIAADQEFCK-KKSRVSHAPYFDLLPADMMAVITMHKLMGLLMTSS 237

Query: 61  VGNDSVRVVQAASEIGEAIEHE-------------------------------------- 120
            GN SVRVVQAA +IGEAIEHE                                      
Sbjct: 238 GGNSSVRVVQAACQIGEAIEHEVRIHKFFENTKKKKSNEKTTEGDTEPVVKDQEKLAKEQ 297

Query: 121 ------------------------------------------------------------ 180
                                                                       
Sbjct: 298 DKLRKKVTNLMKKQKLRQVRMIVKEHDHLKPWGQDAHVKVGCRLIQLLIETAYIQPPMDQ 357

Query: 181 ------------------------ETSKRYDVIECNSLVRRGLGKTLCRIIYCRLNARHM 240
                                   +TS+RY VIEC+ LVRRGL KT          ARHM
Sbjct: 358 LGGGPPDIRPAFVHTLKTITTEAQKTSRRYGVIECDPLVRRGLEKT----------ARHM 417

Query: 241 VGSYMPMLVPHLNWTGYDNGAYLFLPSYVMRIHGAKQQREAVKRAPRKQLEPIF------ 300
           V  YMPMLVP LNWTGYD GA+LFLPSYVMRIHGAKQQREAVKR P+KQLEP+F      
Sbjct: 418 VIPYMPMLVPPLNWTGYDKGAHLFLPSYVMRIHGAKQQREAVKRVPKKQLEPVFEALDTL 477

Query: 301 ------------------------------------------------------------ 360
                                                                       
Sbjct: 478 GRTKWRVNKRVLSIIDRIWASGGRLADLVDREDAPLPEEPTVEDEEEIRKWKWKLKAAKK 537

Query: 361 --------KCFMAFTFEVV--MQSEGAF----------KSWPLGKKFN------------ 379
                   +C +     V   M+ E  F          +++P+    N            
Sbjct: 538 ENSERHSQRCDIELKLAVARKMKEEEGFYYPHNLDFRGRAYPMHPHLNHLGSDMCRGILE 597

[Close]

BLAST of PI0002425 vs. ExPASy TrEMBL
Match: A0A6J1FZD9 (DNA-directed RNA polymerase OS=Cucurbita moschata OX=3662 GN=LOC111449300 PE=3 SV=1)

HSP 1 Score: 373.6 bits (958), Expect = 1.8e-99
Identity = 271/664 (40.81%), Postives = 300/664 (45.18%), Query Frame = 0


Query: 1   MKSLFLGWFKPLRDAIVAVQEFCKDKKCRSSHAPYFDLLPAYKMAVITMHKLMGLLMSGT 60
           +KSLFLGWF+PLRDAI A QEFCK KK R SHAPYFDLLPA  MAVITMHKLMGLLM+ +
Sbjct: 178 IKSLFLGWFEPLRDAIAADQEFCK-KKSRVSHAPYFDLLPADMMAVITMHKLMGLLMTSS 237

Query: 61  VGNDSVRVVQAASEIGEAIEHE-------------------------------------- 120
            GN SVRVVQAA +IGEAIEHE                                      
Sbjct: 238 GGNSSVRVVQAACQIGEAIEHEVRIHKFFENTKKKKKNSNEKTTEGDTEPVVEDQEKLAK 297

Query: 121 ------------------------------------------------------------ 180
                                                                       
Sbjct: 298 EQDKLRKKVTNLMKKQKLRQVRMIVKEHDDLKPWGQDAHVKVGCRLIQLLIETAYIQPPM 357

Query: 181 --------------------------ETSKRYDVIECNSLVRRGLGKTLCRIIYCRLNAR 240
                                     +TS+RY VIEC+ LVRRGL KT          AR
Sbjct: 358 DQLGGGPPDIRPAFVHTLKTITKEAQKTSRRYGVIECDPLVRRGLEKT----------AR 417

Query: 241 HMVGSYMPMLVPHLNWTGYDNGAYLFLPSYVMRIHGAKQQREAVKRAPRKQLEPIFKCF- 300
           HMV  YMPMLVP LNWTGYD GA+LFLPSYVMRIHGAKQQREAVKR P+KQLEP+F+   
Sbjct: 418 HMVIPYMPMLVPPLNWTGYDKGAHLFLPSYVMRIHGAKQQREAVKRVPKKQLEPVFEALD 477

Query: 301 -----------------------------------MAFTFEVVMQSEGAFKSWPLGKK-- 360
                                              +    E  ++ E   + W    K  
Sbjct: 478 TLGRTKWRVNKRVLSIIDRIWTSGGRLADLVDREDVPLPEEPTVEDEAEIRKWKWKLKGA 537

Query: 361 ---------------------------------FNLKF---------------------L 379
                                             NL F                     +
Sbjct: 538 KKENSERHSQRCDIELKLAVARKMKEEEGFYYPHNLDFRGRAYPMHPHLNHLGSDMCRGI 597

[Close]

BLAST of PI0002425 vs. ExPASy TrEMBL
Match: A0A6I9UQH9 (DNA-directed RNA polymerase OS=Sesamum indicum OX=4182 GN=LOC105179999 PE=3 SV=1)

HSP 1 Score: 355.5 bits (911), Expect = 5.1e-94
Identity = 234/559 (41.86%), Postives = 282/559 (50.45%), Query Frame = 0


Query: 1   MKSLFLGWFKPLRDAIVAVQEFCKDKKCRSSHAPYFDLLPAYKMAVITMHKLMGLLMSGT 60
           +KSLFLGWF+PL+DAI A Q+ CK+ K R ++APYFD LPA  MAVITMHKLMGLLM+G 
Sbjct: 187 IKSLFLGWFEPLKDAIAAEQDLCKEGKNRGAYAPYFDQLPADMMAVITMHKLMGLLMTGG 246

Query: 61  VGNDSVRVVQAASEIGEAIEHE-------------------------------------- 120
             N S RVVQAA  IGEAIEHE                                      
Sbjct: 247 -WNGSARVVQAACHIGEAIEHEVRIHKFLENCKRKNALNRTSEEGPDPEAKEQERLSKKV 306

Query: 121 ------------------------------------------------------------ 180
                                                                       
Sbjct: 307 KMLMKKQKLHQVRKIVRQQDDLKPWGQDAQVKVGCRLIQILTQTAYIQPPVDQMDDAPPD 366

Query: 181 ---------------ETSKRYDVIECNSLVRRGLGKTLCRIIYCRLNARHMVGSYMPMLV 240
                          + ++RY VIEC+ LV +GL KT          ARHMV  YMPMLV
Sbjct: 367 IRPAFVHTLKSVETVKGTRRYGVIECDPLVCKGLEKT----------ARHMVIPYMPMLV 426

Query: 241 PHLNWTGYDNGAYLFLPSYVMRIHGAKQQREAVKRAPRKQLEPIFKCFMAFTFE-----V 300
           P LNWTGY+ GAYLFLPSY+MR HGAKQQR+AVKRAP+ QLEPIF+    FTF      +
Sbjct: 427 PPLNWTGYERGAYLFLPSYMMRTHGAKQQRDAVKRAPKLQLEPIFQVNQFFTFRDQCSLM 486

Query: 301 VMQSEGAFKS----WPLGKKFNLKFLYEFQ--------------YAGGVDKLSYKERISF 360
           +    G  ++    W   K   LK                    Y GGVDKLSY+ R+SF
Sbjct: 487 IFTESGLMEAVLPIWLTVKIVKLKPQKNVSCCLSSSISSQISNVYGGGVDKLSYEGRVSF 546

Query: 361 TENHLDEIFYSANMPLEGRGWWLGAEDPFQCLAVCINLSESLRSPSTETTISHIPVHQYG 379
           TENHL++IF SA+ PLEG+ WWLGAEDPFQCLA CINLSE+LRSP  E+T+SH+PVHQ G
Sbjct: 547 TENHLEDIFDSADRPLEGKRWWLGAEDPFQCLATCINLSEALRSPYPESTVSHMPVHQDG 606

[Close]

BLAST of PI0002425 vs. NCBI nr
Match: XP_022967967.1 (DNA-directed RNA polymerase 1B, mitochondrial-like [Cucurbita maxima])

HSP 1 Score: 377.5 bits (968), Expect = 2.6e-100
Identity = 272/662 (41.09%), Postives = 299/662 (45.17%), Query Frame = 0


Query: 1   MKSLFLGWFKPLRDAIVAVQEFCKDKKCRSSHAPYFDLLPAYKMAVITMHKLMGLLMSGT 60
           MKSLFLGWF+PLRDAI A QEF KDKK R SHAPYFDLLPA  MAVITMHKLMGLLM+ +
Sbjct: 178 MKSLFLGWFEPLRDAIAADQEFFKDKKTRVSHAPYFDLLPADMMAVITMHKLMGLLMTNS 237

Query: 61  VGNDSVRVVQAASEIGEAIEHE-------------------------------------- 120
            GN SVRVVQAA +IGEAIEHE                                      
Sbjct: 238 GGNSSVRVVQAACQIGEAIEHEVRIHKFFEKTKKKNSNEKTTEGDTEPVVEDQEKLAKQQ 297

Query: 121 ------------------------------------------------------------ 180
                                                                       
Sbjct: 298 DKLRKKVTNLMKKQKLRQVRMIVKEHDDLKPWGQDAHVKVGCRLIQLLIETAYIQPPIDQ 357

Query: 181 ------------------------ETSKRYDVIECNSLVRRGLGKTLCRIIYCRLNARHM 240
                                   +TS+RY VIEC+ LVRRGL KT          ARHM
Sbjct: 358 LGEGPPDIRPAFVHTLKTITKEAQKTSRRYGVIECDPLVRRGLEKT----------ARHM 417

Query: 241 VGSYMPMLVPHLNWTGYDNGAYLFLPSYVMRIHGAKQQREAVKRAPRKQLEPIFKCF--- 300
           V  YMPMLVP L WTGYD GAYLFLPSYVMRIHGAKQQREAVKR P+KQLEP+F+     
Sbjct: 418 VIPYMPMLVPPLYWTGYDKGAYLFLPSYVMRIHGAKQQREAVKRVPKKQLEPVFEALDTL 477

Query: 301 ---------------------------------MAFTFEVVMQSEGAFKSWPLGKK---- 360
                                            +    E  ++ E   + W    K    
Sbjct: 478 GRTKWRVNKRILSIIDRIWASGGRLADLVDREDVPLPEEPTVEDEAEIRKWKWKVKAAKK 537

Query: 361 -------------------------------FNLKF---------------------LYE 379
                                           NL F                     + E
Sbjct: 538 ENSERHSQRCDIELKLAVARKMKEEEGFYYPHNLDFRGRAYPMHPYLNHLGSDMCRGILE 597

[Close]

BLAST of PI0002425 vs. NCBI nr
Match: XP_022149021.1 (DNA-directed RNA polymerase 1B, mitochondrial [Momordica charantia])

HSP 1 Score: 374.4 bits (960), Expect = 2.2e-99
Identity = 261/646 (40.40%), Postives = 293/646 (45.36%), Query Frame = 0


Query: 1   MKSLFLGWFKPLRDAIVAVQEFCKDKKCRSSHAPYFDLLPAYKMAVITMHKLMGLLMSGT 60
           +KSLFLGWF+PLRDAI A QE+CKDKK R SHAPYFDL+PA  MAVITMHKLMGLLM+ +
Sbjct: 177 VKSLFLGWFEPLRDAIAADQEYCKDKKNRVSHAPYFDLIPADMMAVITMHKLMGLLMTNS 236

Query: 61  VGNDSVRVVQAASEIGEAIEHE-------------------------------------- 120
            GN SVRVVQAA +IGEAIEHE                                      
Sbjct: 237 GGNGSVRVVQAACQIGEAIEHEVRIHKFFEKTKKKNVNEKNTEAEADPVAEEQEKLAKEQ 296

Query: 121 ------------------------------------------------------------ 180
                                                                       
Sbjct: 297 DKLRKKVTKLMKKQKLQQVRMIVKEQDDLKPWGQDAHVKVGCRLMQLLMETAYIQPPIDQ 356

Query: 181 ------------------------ETSKRYDVIECNSLVRRGLGKTLCRIIYCRLNARHM 240
                                   +TS+RY VIEC+ LVRRGL KT          ARH 
Sbjct: 357 LGNGPPDIRPAFVHTLKTITREAQKTSRRYGVIECDPLVRRGLEKT----------ARHT 416

Query: 241 VGSYMPMLVPHLNWTGYDNGAYLFLPSYVMRIHGAKQQREAVKRAPRKQLEPIFKCF--- 300
           V  Y+PMLVP LNWTGYD GAYLFLPSYVMRIHGAKQQREAVKRAP+KQLEP+F+     
Sbjct: 417 VIPYLPMLVPPLNWTGYDKGAYLFLPSYVMRIHGAKQQREAVKRAPKKQLEPVFEALDTL 476

Query: 301 ---------------------------------MAFTFEVVMQSEGAFKSW--------- 360
                                            +    E  +  E   + W         
Sbjct: 477 GRTKWRVNKRVLSVIDRIWASGGRLADLVDREDVPLPEEPNVDDEAEIRKWKWKVKAAKK 536

Query: 361 ------------------------------------------------------------ 365
                                                                       
Sbjct: 537 ENSERHSQRCDIELKLAVARKMKEEDGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGVLE 596

[Close]

BLAST of PI0002425 vs. NCBI nr
Match: XP_022944908.1 (DNA-directed RNA polymerase 1B, mitochondrial-like [Cucurbita moschata])

HSP 1 Score: 374.0 bits (959), Expect = 2.9e-99
Identity = 271/662 (40.94%), Postives = 301/662 (45.47%), Query Frame = 0


Query: 1   MKSLFLGWFKPLRDAIVAVQEFCKDKKCRSSHAPYFDLLPAYKMAVITMHKLMGLLMSGT 60
           MKSLFLGWF+PLRDAI A QEFCK KK R SHAPYFDLLPA  MAVITMHKLMGLLM+ +
Sbjct: 178 MKSLFLGWFEPLRDAIAADQEFCK-KKSRVSHAPYFDLLPADMMAVITMHKLMGLLMTSS 237

Query: 61  VGNDSVRVVQAASEIGEAIEHE-------------------------------------- 120
            GN SVRVVQAA +IGEAIEHE                                      
Sbjct: 238 GGNSSVRVVQAACQIGEAIEHEVRIHKFFENTKKKKSNEKTTEGDTEPVVKDQEKLAKEQ 297

Query: 121 ------------------------------------------------------------ 180
                                                                       
Sbjct: 298 DKLRKKVTNLMKKQKLRQVRMIVKEHDHLKPWGQDAHVKVGCRLIQLLIETAYIQPPMDQ 357

Query: 181 ------------------------ETSKRYDVIECNSLVRRGLGKTLCRIIYCRLNARHM 240
                                   +TS+RY VIEC+ LVRRGL KT          ARHM
Sbjct: 358 LGGGPPDIRPAFVHTLKTITTEAQKTSRRYGVIECDPLVRRGLEKT----------ARHM 417

Query: 241 VGSYMPMLVPHLNWTGYDNGAYLFLPSYVMRIHGAKQQREAVKRAPRKQLEPIF------ 300
           V  YMPMLVP LNWTGYD GA+LFLPSYVMRIHGAKQQREAVKR P+KQLEP+F      
Sbjct: 418 VIPYMPMLVPPLNWTGYDKGAHLFLPSYVMRIHGAKQQREAVKRVPKKQLEPVFEALDTL 477

Query: 301 ------------------------------------------------------------ 360
                                                                       
Sbjct: 478 GRTKWRVNKRVLSIIDRIWASGGRLADLVDREDAPLPEEPTVEDEEEIRKWKWKLKAAKK 537

Query: 361 --------KCFMAFTFEVV--MQSEGAF----------KSWPLGKKFN------------ 379
                   +C +     V   M+ E  F          +++P+    N            
Sbjct: 538 ENSERHSQRCDIELKLAVARKMKEEEGFYYPHNLDFRGRAYPMHPHLNHLGSDMCRGILE 597

[Close]

BLAST of PI0002425 vs. NCBI nr
Match: XP_022944910.1 (DNA-directed RNA polymerase 1B, mitochondrial-like [Cucurbita moschata])

HSP 1 Score: 373.6 bits (958), Expect = 3.8e-99
Identity = 271/664 (40.81%), Postives = 300/664 (45.18%), Query Frame = 0


Query: 1   MKSLFLGWFKPLRDAIVAVQEFCKDKKCRSSHAPYFDLLPAYKMAVITMHKLMGLLMSGT 60
           +KSLFLGWF+PLRDAI A QEFCK KK R SHAPYFDLLPA  MAVITMHKLMGLLM+ +
Sbjct: 178 IKSLFLGWFEPLRDAIAADQEFCK-KKSRVSHAPYFDLLPADMMAVITMHKLMGLLMTSS 237

Query: 61  VGNDSVRVVQAASEIGEAIEHE-------------------------------------- 120
            GN SVRVVQAA +IGEAIEHE                                      
Sbjct: 238 GGNSSVRVVQAACQIGEAIEHEVRIHKFFENTKKKKKNSNEKTTEGDTEPVVEDQEKLAK 297

Query: 121 ------------------------------------------------------------ 180
                                                                       
Sbjct: 298 EQDKLRKKVTNLMKKQKLRQVRMIVKEHDDLKPWGQDAHVKVGCRLIQLLIETAYIQPPM 357

Query: 181 --------------------------ETSKRYDVIECNSLVRRGLGKTLCRIIYCRLNAR 240
                                     +TS+RY VIEC+ LVRRGL KT          AR
Sbjct: 358 DQLGGGPPDIRPAFVHTLKTITKEAQKTSRRYGVIECDPLVRRGLEKT----------AR 417

Query: 241 HMVGSYMPMLVPHLNWTGYDNGAYLFLPSYVMRIHGAKQQREAVKRAPRKQLEPIFKCF- 300
           HMV  YMPMLVP LNWTGYD GA+LFLPSYVMRIHGAKQQREAVKR P+KQLEP+F+   
Sbjct: 418 HMVIPYMPMLVPPLNWTGYDKGAHLFLPSYVMRIHGAKQQREAVKRVPKKQLEPVFEALD 477

Query: 301 -----------------------------------MAFTFEVVMQSEGAFKSWPLGKK-- 360
                                              +    E  ++ E   + W    K  
Sbjct: 478 TLGRTKWRVNKRVLSIIDRIWTSGGRLADLVDREDVPLPEEPTVEDEAEIRKWKWKLKGA 537

Query: 361 ---------------------------------FNLKF---------------------L 379
                                             NL F                     +
Sbjct: 538 KKENSERHSQRCDIELKLAVARKMKEEEGFYYPHNLDFRGRAYPMHPHLNHLGSDMCRGI 597

[Close]

BLAST of PI0002425 vs. NCBI nr
Match: KAG6574025.1 (DNA-directed RNA polymerase 2, chloroplastic/mitochondrial, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 373.6 bits (958), Expect = 3.8e-99
Identity = 268/661 (40.54%), Postives = 299/661 (45.23%), Query Frame = 0


Query: 1   MKSLFLGWFKPLRDAIVAVQEFCKDKKCRSSHAPYFDLLPAYKMAVITMHKLMGLLMSGT 60
           +KSLFLGWF+PLRDAI A QEFCK KK R SHAPYFDLLPA  MAVITMHKLMGLLM+ +
Sbjct: 178 IKSLFLGWFEPLRDAIAADQEFCK-KKSRVSHAPYFDLLPADMMAVITMHKLMGLLMTSS 237

Query: 61  VGNDSVRVVQAASEIGEAIEHE-------------------------------------- 120
            GN SVRVVQAA +IGEAIEHE                                      
Sbjct: 238 GGNSSVRVVQAACQIGEAIEHEVRIHKFFENTKKKKKNSNEKTTEGDTEPVVEDQEKLAK 297

Query: 121 ------------------------------------------------------------ 180
                                                                       
Sbjct: 298 EQDKLRKKVTNLMKKQKLRQVRMIVKEHDDLKPWGQEAHVKVGCRLIQLLIETAYIQPPM 357

Query: 181 --------------------------ETSKRYDVIECNSLVRRGLGKTLCRIIYCRLNAR 240
                                     +TS+RY VIEC+ LVRRGL KT          AR
Sbjct: 358 DQLGGGPPDIRPAFVHTLKTITKEAQKTSRRYGVIECDPLVRRGLEKT----------AR 417

Query: 241 HMVGSYMPMLVPHLNWTGYDNGAYLFLPSYVMRIHGAKQQREAVKRAPRKQLEPIFKCF- 300
           HMV  YMPMLVP LNWTGYD GA+LFLPSYVMRIHGAKQQREAVKR P+KQLEP+F+   
Sbjct: 418 HMVIPYMPMLVPPLNWTGYDKGAHLFLPSYVMRIHGAKQQREAVKRVPKKQLEPVFEALD 477

Query: 301 -----------------------------------MAFTFEVVMQSEGAFKSWPLGKK-- 360
                                              +    E  ++ E   + W    K  
Sbjct: 478 TLGRTKWRVNKRVLSIIDRIWASGGRLADLVDREDVPLPEEPTVEDEAEIRKWKWKLKAA 537

Query: 361 ---------------------------------FNLKF---------------------L 379
                                             NL F                     +
Sbjct: 538 KKENSERHSQRCDIELKLAVARKMKEEEGFYYPHNLDFRGRAYPMHPHLNHLGSDMCRGI 597

[Close]

BLAST of PI0002425 vs. TAIR 10
Match: AT1G68990.2 (male gametophyte defective 3 )

HSP 1 Score: 271.2 bits (692), Expect = 2.4e-72
Identity = 207/643 (32.19%), Postives = 265/643 (41.21%), Query Frame = 0


Query: 1   MKSLFLGWFKPLRDAIVAVQEFCKDKKCRSSHAPYFDLLPAYKMAVITMHKLMGLLMSGT 60
           MKSLFLGWF+P+R+AI    +  K KK +  +AP+ + LPA KMAVITMHK+MGLLM+  
Sbjct: 173 MKSLFLGWFEPVRNAIQDDLDTFKIKKGKIPYAPFMEQLPADKMAVITMHKMMGLLMTNA 232

Query: 61  VGNDSVRVVQAASEIGEAIEHE-------------------------------------- 120
            G   V++V AA++IGEA+E E                                      
Sbjct: 233 EGVGIVKLVNAATQIGEAVEQEVRINSFLQKKNKKNATDKTINTEAENVSEEIVAKETEK 292

Query: 121 ------------------------------------------------------------ 180
                                                                       
Sbjct: 293 ARKQVTVLMEKNKLRQVKALVRKHDSFKPWGQEAQVKVGARLIQLLMENAYIQPPAEQFD 352

Query: 181 ----------------------ETSKRYDVIECNSLVRRGLGKTLCRIIYCRLNARHMVG 240
                                 +TS+RY  IEC+ LV +GL K++ RI+     ARHMV 
Sbjct: 353 DGPPDIRPAFKQNFRTVTLENTKTSRRYGCIECDPLVLKGLDKSVSRIVD---YARHMVI 412

Query: 241 SYMPMLVPHLNWTGYDNGAYLFLPSYVMRIHGAKQQREAVKRAPRKQLEPIFKCF----- 300
            Y+PML+P  NWTGYD GA+ FLPSYVMR HGAKQQR  +KR P++QLEP+++       
Sbjct: 413 PYLPMLIPPQNWTGYDQGAHFFLPSYVMRTHGAKQQRTVMKRTPKEQLEPVYEALDTLGN 472

Query: 301 -------------------------------MAFTFEVVMQSEGAFKSW----------- 360
                                          +    E   + +  FK+W           
Sbjct: 473 TKWKINKKVLSLVDRIWANGGRIGGLVDREDVPIPEEPEREDQEKFKNWRWESKKAIKQN 532

Query: 361 ------------------------------------------------------------ 364
                                                                       
Sbjct: 533 NERHSQRCDIELKLEVARKMKDEEGFYYPHNVDFRGRAYPIHPYLNHLGSDLCRGILEFC 592

[Close]

BLAST of PI0002425 vs. TAIR 10
Match: AT1G68990.1 (male gametophyte defective 3 )

HSP 1 Score: 266.2 bits (679), Expect = 7.9e-71
Identity = 205/643 (31.88%), Postives = 261/643 (40.59%), Query Frame = 0


Query: 1   MKSLFLGWFKPLRDAIVAVQEFCKDKKCRSSHAPYFDLLPAYKMAVITMHKLMGLLMSGT 60
           MKSLFLGWF+P+R+AI    +  K KK +  +AP+ + LPA KMAVITMHK+MGLLM+  
Sbjct: 173 MKSLFLGWFEPVRNAIQDDLDTFKIKKGKIPYAPFMEQLPADKMAVITMHKMMGLLMTNA 232

Query: 61  VGNDSVRVVQAASEIGEAIEHE-------------------------------------- 120
            G   V++V AA++IGEA+E E                                      
Sbjct: 233 EGVGIVKLVNAATQIGEAVEQEVRINSFLQKKNKKNATDKTINTEAENVSEEIVAKETEK 292

Query: 121 ------------------------------------------------------------ 180
                                                                       
Sbjct: 293 ARKQVTVLMEKNKLRQVKALVRKHDSFKPWGQEAQVKVGARLIQLLMENAYIQPPAEQFD 352

Query: 181 ----------------------ETSKRYDVIECNSLVRRGLGKTLCRIIYCRLNARHMVG 240
                                 +TS+RY  IEC+ LV +GL K          +ARHMV 
Sbjct: 353 DGPPDIRPAFKQNFRTVTLENTKTSRRYGCIECDPLVLKGLDK----------SARHMVI 412

Query: 241 SYMPMLVPHLNWTGYDNGAYLFLPSYVMRIHGAKQQREAVKRAPRKQLEPIFKCF----- 300
            Y+PML+P  NWTGYD GA+ FLPSYVMR HGAKQQR  +KR P++QLEP+++       
Sbjct: 413 PYLPMLIPPQNWTGYDQGAHFFLPSYVMRTHGAKQQRTVMKRTPKEQLEPVYEALDTLGN 472

Query: 301 -------------------------------MAFTFEVVMQSEGAFKSW----------- 360
                                          +    E   + +  FK+W           
Sbjct: 473 TKWKINKKVLSLVDRIWANGGRIGGLVDREDVPIPEEPEREDQEKFKNWRWESKKAIKQN 532

Query: 361 ------------------------------------------------------------ 364
                                                                       
Sbjct: 533 NERHSQRCDIELKLEVARKMKDEEGFYYPHNVDFRGRAYPIHPYLNHLGSDLCRGILEFC 592

[Close]

BLAST of PI0002425 vs. TAIR 10
Match: AT5G15700.1 (DNA/RNA polymerases superfamily protein )

HSP 1 Score: 265.0 bits (676), Expect = 1.8e-70
Identity = 208/634 (32.81%), Postives = 260/634 (41.01%), Query Frame = 0


Query: 1   MKSLFLGWFKPLRDAIVAVQEFCKDKKCRSSHAPYFDLLPAYKMAVITMHKLMGLLMSGT 60
           +KSLFLGWF+PLRDAI   QE  +  K ++++A Y D LPA K++VITMHKLMG LM+G 
Sbjct: 215 VKSLFLGWFEPLRDAIAKDQELYRLGKSKATYAHYLDQLPADKISVITMHKLMGHLMTGG 274

Query: 61  VGNDSVRVVQAASEIGEAIEHE------------------------ETS----------- 120
             N  V+VV AA  +G+AIE E                        ETS           
Sbjct: 275 -DNGCVKVVHAACTVGDAIEQEIRICTFLDKKKKGDDNEESGGVENETSMKEQDKLRKKV 334

Query: 121 ------------------------------------------------------------ 180
                                                                       
Sbjct: 335 NELIKKQKLSAVRKILQSHDYTKPWIADVRAKVGSRLIELLVRTAYIQSPADQQDNDLPD 394

Query: 181 -------------------KRYDVIECNSLVRRGLGKTLCRIIYCRLNARHMVGSYMPML 240
                              ++Y VIEC+ LVR+GL K          + R+ V  YMPML
Sbjct: 395 VRPAFVHTFKVAKGSMNSGRKYGVIECDPLVRKGLEK----------SGRYAVMPYMPML 454

Query: 241 VPHLNWTGYDNGAYLFLPSYVMRIHGAKQQREAVKRAPRKQLEPIFKCF----------- 300
           VP L W+GYD GAYLFL SY+M+ HGAKQQREA+K AP+ QL+P+F+             
Sbjct: 455 VPPLKWSGYDKGAYLFLTSYIMKTHGAKQQREALKSAPKGQLQPVFEALDTLGSTKWRVN 514

Query: 301 -------------------MAFTFEVVM------QSEGAFKSW----PLGKKFN------ 360
                              M    +V +      + EG  K W       KK N      
Sbjct: 515 KRVLTVVDRIWSSGGCVADMVDRSDVPLPEKPDTEDEGILKKWKWEVKSAKKVNSERHSQ 574

Query: 361 ------------------------------------------------------------ 364
                                                                       
Sbjct: 575 RCDTELKLSVARKMKDEEAFYYPHNMDFRGRAYPMPPHLNHLGSDLCRGVLEFAEGRPMG 634

[Close]

BLAST of PI0002425 vs. TAIR 10
Match: AT5G15700.2 (DNA/RNA polymerases superfamily protein )

HSP 1 Score: 265.0 bits (676), Expect = 1.8e-70
Identity = 208/634 (32.81%), Postives = 260/634 (41.01%), Query Frame = 0


Query: 1   MKSLFLGWFKPLRDAIVAVQEFCKDKKCRSSHAPYFDLLPAYKMAVITMHKLMGLLMSGT 60
           +KSLFLGWF+PLRDAI   QE  +  K ++++A Y D LPA K++VITMHKLMG LM+G 
Sbjct: 215 VKSLFLGWFEPLRDAIAKDQELYRLGKSKATYAHYLDQLPADKISVITMHKLMGHLMTGG 274

Query: 61  VGNDSVRVVQAASEIGEAIEHE------------------------ETS----------- 120
             N  V+VV AA  +G+AIE E                        ETS           
Sbjct: 275 -DNGCVKVVHAACTVGDAIEQEIRICTFLDKKKKGDDNEESGGVENETSMKEQDKLRKKV 334

Query: 121 ------------------------------------------------------------ 180
                                                                       
Sbjct: 335 NELIKKQKLSAVRKILQSHDYTKPWIADVRAKVGSRLIELLVRTAYIQSPADQQDNDLPD 394

Query: 181 -------------------KRYDVIECNSLVRRGLGKTLCRIIYCRLNARHMVGSYMPML 240
                              ++Y VIEC+ LVR+GL K          + R+ V  YMPML
Sbjct: 395 VRPAFVHTFKVAKGSMNSGRKYGVIECDPLVRKGLEK----------SGRYAVMPYMPML 454

Query: 241 VPHLNWTGYDNGAYLFLPSYVMRIHGAKQQREAVKRAPRKQLEPIFKCF----------- 300
           VP L W+GYD GAYLFL SY+M+ HGAKQQREA+K AP+ QL+P+F+             
Sbjct: 455 VPPLKWSGYDKGAYLFLTSYIMKTHGAKQQREALKSAPKGQLQPVFEALDTLGSTKWRVN 514

Query: 301 -------------------MAFTFEVVM------QSEGAFKSW----PLGKKFN------ 360
                              M    +V +      + EG  K W       KK N      
Sbjct: 515 KRVLTVVDRIWSSGGCVADMVDRSDVPLPEKPDTEDEGILKKWKWEVKSAKKVNSERHSQ 574

Query: 361 ------------------------------------------------------------ 364
                                                                       
Sbjct: 575 RCDTELKLSVARKMKDEEAFYYPHNMDFRGRAYPMPPHLNHLGSDLCRGVLEFAEGRPMG 634

[Close]

BLAST of PI0002425 vs. TAIR 10
Match: AT2G24120.2 (DNA/RNA polymerases superfamily protein )

HSP 1 Score: 226.1 bits (575), Expect = 9.0e-59
Identity = 183/638 (28.68%), Postives = 248/638 (38.87%), Query Frame = 0


Query: 1   MKSLFLGWFKPLRDAIVAVQEFCKD--KKCRSSHAPYFDLLPAYKMAVITMHKLMGLLMS 60
           +K +FLGWF+PL+D I   Q+  K+  KK R+++AP+ +LLPA KMAVI MHK+MGL+MS
Sbjct: 200 VKHMFLGWFQPLKDVIEREQKLQKNKSKKVRAAYAPHIELLPADKMAVIVMHKMMGLVMS 259

Query: 61  GTVGNDSVRVVQAASEIGEAIEHE------------------------------------ 120
           G   +  ++VVQAA  IG AIE E                                    
Sbjct: 260 GH-EDGCIQVVQAAVSIGIAIEQEVRIHNFLKRTRKNNAGDSQEELKEKQLLRKRVNSLI 319

Query: 121 ------------------------------------------------------------ 180
                                                                       
Sbjct: 320 RRKRIIDALKVVKSEGTKPWGRATQAKLGSRLLELLIEAAYVQPPLTQSGDSIPEFRPAF 379

Query: 181 -------------ETSKRYDVIECNSLVRRGLGKTLCRIIYCRLNARHMVGSYMPMLVPH 240
                        +  +RY VIEC+SL+  GL K          +A+HM+  Y+PMLVP 
Sbjct: 380 RHRFKTVTKYPGSKLVRRYGVIECDSLLLAGLDK----------SAKHMLIPYVPMLVPP 439

Query: 241 LNWTGYDNGAYLFLPSYVMRIHGAKQQREAVKRAPRKQLEPIF----------------- 300
             W GYD G YLFLPSY+MR HG+K+Q++A+K    K    +F                 
Sbjct: 440 KRWKGYDKGGYLFLPSYIMRTHGSKKQQDALKDISHKTAHRVFEALDTLGNTKWRVNRNI 499

Query: 301 ---------------------------------------------------------KCF 360
                                                                    +C 
Sbjct: 500 LDVVERLWADGGNIAGLVNREDVPIPEKPSSEDPEELQSWKWSARKANKINRERHSLRCD 559

Query: 361 MAFTFEVV--MQSEGAF----------KSWPLGKKFN----------------------- 365
           +     V   M+ E  F          +++P+    N                       
Sbjct: 560 VELKLSVARKMKDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDLCRGTLEFAEGRPLGKSG 619

The following BLAST results are available for this feature:

BLAST of PI0002425 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q93Y94	3.8e-86	35.69	DNA-directed RNA polymerase 1, mitochondrial OS=Nicotiana sylvestris OX=4096 GN=...	[more]
Q8L6J5	4.9e-86	36.14	DNA-directed RNA polymerase 1B, mitochondrial OS=Nicotiana tabacum OX=4097 GN=RP...	[more]
Q8VWF8	7.4e-74	33.33	DNA-directed RNA polymerase 2, chloroplastic/mitochondrial OS=Nicotiana sylvestr...	[more]
Q8L6J3	2.2e-73	33.02	DNA-directed RNA polymerase 2B, chloroplastic/mitochondrial OS=Nicotiana tabacum...	[more]
P92969	1.1e-69	31.88	DNA-directed RNA polymerase 1, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=...	[more]

BLAST of PI0002425 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HS83	1.3e-100	41.09	DNA-directed RNA polymerase OS=Cucurbita maxima OX=3661 GN=LOC111467347 PE=3 SV=...	[more]
A0A6J1D747	1.1e-99	40.40	DNA-directed RNA polymerase OS=Momordica charantia OX=3673 GN=LOC111017540 PE=3 ...	[more]
A0A6J1FZC4	1.4e-99	40.94	DNA-directed RNA polymerase OS=Cucurbita moschata OX=3662 GN=LOC111449299 PE=3 S...	[more]
A0A6J1FZD9	1.8e-99	40.81	DNA-directed RNA polymerase OS=Cucurbita moschata OX=3662 GN=LOC111449300 PE=3 S...	[more]
A0A6I9UQH9	5.1e-94	41.86	DNA-directed RNA polymerase OS=Sesamum indicum OX=4182 GN=LOC105179999 PE=3 SV=1	[more]

BLAST of PI0002425 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022967967.1	2.6e-100	41.09	DNA-directed RNA polymerase 1B, mitochondrial-like [Cucurbita maxima]	[more]
XP_022149021.1	2.2e-99	40.40	DNA-directed RNA polymerase 1B, mitochondrial [Momordica charantia]	[more]
XP_022944908.1	2.9e-99	40.94	DNA-directed RNA polymerase 1B, mitochondrial-like [Cucurbita moschata]	[more]
XP_022944910.1	3.8e-99	40.81	DNA-directed RNA polymerase 1B, mitochondrial-like [Cucurbita moschata]	[more]
KAG6574025.1	3.8e-99	40.54	DNA-directed RNA polymerase 2, chloroplastic/mitochondrial, partial [Cucurbita a...	[more]

BLAST of PI0002425 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G68990.2	2.4e-72	32.19	male gametophyte defective 3	[more]
AT1G68990.1	7.9e-71	31.88	male gametophyte defective 3	[more]
AT5G15700.1	1.8e-70	32.81	DNA/RNA polymerases superfamily protein	[more]
AT5G15700.2	1.8e-70	32.81	DNA/RNA polymerases superfamily protein	[more]
AT2G24120.2	9.0e-59	28.68	DNA/RNA polymerases superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 467..487
None	No IPR available	COILS	Coil	Coil	coord: 495..515
None	No IPR available	GENE3D	1.10.287.280		coord: 194..268 e-value: 3.3E-15 score: 57.6
None	No IPR available	GENE3D	2.40.50.40		coord: 657..716 e-value: 5.7E-9 score: 37.6
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 427..468
None	No IPR available	PANTHER	PTHR10102:SF7	DNA-DIRECTED RNA POLYMERASE	coord: 304..333 coord: 330..366
None	No IPR available	PANTHER	PTHR10102:SF7	DNA-DIRECTED RNA POLYMERASE	coord: 194..290 coord: 1..82 coord: 83..175
IPR000953	Chromo/chromo shadow domain	SMART	SM00298	chromo_7	coord: 656..714 e-value: 8.1E-4 score: 28.7
IPR000953	Chromo/chromo shadow domain	PROSITE	PS50013	CHROMO_2	coord: 657..719 score: 10.856101
IPR029262	DNA-directed RNA polymerase, N-terminal	SMART	SM01311	RPOL_N_2	coord: 1..173 e-value: 8.1E-11 score: 51.9
IPR029262	DNA-directed RNA polymerase, N-terminal	PFAM	PF14700	RPOL_N	coord: 85..173 e-value: 2.6E-17 score: 63.3 coord: 1..87 e-value: 2.4E-16 score: 60.1
IPR037159	DNA-directed RNA polymerase, N-terminal domain superfamily	GENE3D	1.10.1320.10		coord: 84..175 e-value: 6.7E-13 score: 50.5 coord: 1..83 e-value: 4.6E-18 score: 67.4
IPR023780	Chromo domain	PFAM	PF00385	Chromo	coord: 662..711 e-value: 3.4E-8 score: 33.3
IPR002092	DNA-directed RNA polymerase, phage-type	PFAM	PF00940	RNA_pol	coord: 210..287 e-value: 3.1E-23 score: 82.3
IPR002092	DNA-directed RNA polymerase, phage-type	PANTHER	PTHR10102	DNA-DIRECTED RNA POLYMERASE, MITOCHONDRIAL	coord: 194..290 coord: 304..333 coord: 83..175 coord: 330..366
IPR002092	DNA-directed RNA polymerase, phage-type	PANTHER	PTHR10102	DNA-DIRECTED RNA POLYMERASE, MITOCHONDRIAL	coord: 1..82
IPR043502	DNA/RNA polymerase superfamily	SUPERFAMILY	56672	DNA/RNA polymerases	coord: 2..364
IPR016197	Chromo-like domain superfamily	SUPERFAMILY	54160	Chromo domain-like	coord: 651..712

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0002425.1	PI0002425.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006351	transcription, DNA-templated
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003899	DNA-directed 5'-3' RNA polymerase activity