PI0002413 (gene) Melon (PI 482460) v1

Overview
NamePI0002413
Typegene
OrganismCucumis metuliferus (Melon (PI 482460) v1)
DescriptionUnknown protein
Locationchr06: 2410256 .. 2410640 (+)
RNA-Seq ExpressionPI0002413
SyntenyPI0002413
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAACACGAACTTCATAAATCCCAAAAAAGAAATTGGCATTTATCATAAGCTTCAAACAACAAATCTGAATTTTAGTCCCTGTGTACCAAACCATAGGAATGAATGAATTATCATTTTAAATTATCCAGATATATAACATAGTTTACCTTTTTTTTCTTATCAAAATGGTCAGACAATGCCACCAATTCATCCAAGAAATCCAAACACCTGCTTCATCAACTTCAGACAAACTTAAAGAAAAAGAAAAAAAAAAGGAATTTGACCATAGTATGAATTTTTATTCACAATTTGAAGTTCTTTTCAGCATGTTTGGAAGCTACAAGCTGCAACAAGTTCAGAAGCTTCAGACAGACAAACAGGAAGAAGCTTTTTCTCCATATTAA

mRNA sequence

ATGAACACGAACTTCATAAATCCCAAAAAAGAAATTGGCATTTATCATAAGCTTCAAACAACAAATCTGAATTTTAGTCCCTGTACAATGCCACCAATTCATCCAAGAAATCCAAACACCTTTCTTTTCAGCATGTTTGGAAGCTACAAGCTGCAACAAGTTCAGAAGCTTCAGACAGACAAACAGGAAGAAGCTTTTTCTCCATATTAA

Coding sequence (CDS)

ATGAACACGAACTTCATAAATCCCAAAAAAGAAATTGGCATTTATCATAAGCTTCAAACAACAAATCTGAATTTTAGTCCCTGTACAATGCCACCAATTCATCCAAGAAATCCAAACACCTTTCTTTTCAGCATGTTTGGAAGCTACAAGCTGCAACAAGTTCAGAAGCTTCAGACAGACAAACAGGAAGAAGCTTTTTCTCCATATTAA

Protein sequence

MNTNFINPKKEIGIYHKLQTTNLNFSPCTMPPIHPRNPNTFLFSMFGSYKLQQVQKLQTDKQEEAFSPY
Homology
[Close]
BLAST of PI0002413 vs. ExPASy TrEMBL
Match: A0A0A0KVY3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G113160 PE=4 SV=1)

HSP 1 Score: 70.5 bits (171), Expect = 3.2e-09
Identity = 33/45 (73.33%), Postives = 37/45 (82.22%), Query Frame = 0 

Query: 25 FSPCTMPPIHPRNPNTFLFSMFGSYKLQQVQKLQTDKQEEAFSPY 70
          F+ CTMPP+HPRNP+T    MFG YKLQQVQKLQ +KQEEAF PY
Sbjct: 18 FNSCTMPPVHPRNPDT---CMFGRYKLQQVQKLQQNKQEEAFYPY 59

[Close]
BLAST of PI0002413 vs. NCBI nr
Match: KGN53733.1 (hypothetical protein Csa_015130 [Cucumis sativus])

HSP 1 Score: 70.5 bits (171), Expect = 6.5e-09
Identity = 33/45 (73.33%), Postives = 37/45 (82.22%), Query Frame = 0 

Query: 25 FSPCTMPPIHPRNPNTFLFSMFGSYKLQQVQKLQTDKQEEAFSPY 70
          F+ CTMPP+HPRNP+T    MFG YKLQQVQKLQ +KQEEAF PY
Sbjct: 18 FNSCTMPPVHPRNPDT---CMFGRYKLQQVQKLQQNKQEEAFYPY 59

The following BLAST results are available for this feature:
BLAST of PI0002413 vs.
Match NameE-valueIdentityDescription
BLAST of PI0002413 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KVY33.2e-0973.33Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G113160 PE=4 SV=1[more]
BLAST of PI0002413 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN53733.16.5e-0973.33hypothetical protein Csa_015130 [Cucumis sativus][more]
BLAST of PI0002413 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
PI0002413.1PI0002413.1mRNA