PI0002301 (gene) Melon (PI 482460) v1

Overview
NamePI0002301
Typegene
OrganismCucumis metuliferus (Melon (PI 482460) v1)
DescriptionProtein MNN4-like
Locationchr07: 16826301 .. 16827469 (-)
RNA-Seq ExpressionPI0002301
SyntenyPI0002301
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTCGATCATAGATCTTCCATCTCTTCCTCTAAACACCGTCACTCTGATCGAAAATGGGAGCATCATTTGCATCAAGAACGGTCTGACAACCAAGGTCATGACCTCCAAACACAACCTCCACACAAGGGCGCTTCAAAACGCCCAACTCAAGGCAAAAAATCAATCCAAAGGGTAATGCAGGTCCACAGACCATAATTTAACCCACCACGAGTAGAATCGAGAGTTCGTTTTAATAATCCTAAATCAGAACGCCCTCAACCCAGCTGCATCCCCACAGCCAAAGAACTTAGGAGGATAGAAGATGAAGAAATCTTCAGGAGTTTGGACGACCTGAGCCGTACATCTGGAAAGGTTGCAAATGTGGGGGCAAAACGCAAGCACTCCATAAGGATGGATAAGGAGGACGCAGGCAAGCCATCTAACATCCAAGATCTGGATTTGGAGGATGAAGAAGTGGTTGTTGTGCTCGCAATGGTAAAAGCGGAGAGAGAAGAAAAGGTGAGAAAAGAAAGAGAGGAAGAAGAAAAGAAAAGAAAAGAAAAGGAAAGGAAAGAAAGGAAAAAGGTGGAAGAAAGGCGAGAGGAGGAAGAATGCCATGGTGAGCGTGTGCATCACGAAGAAAGGAATAAATGCGATAGGAGAGAGAAACGCGAGAAATTGAAAAAGCAAGGAAGTGAGCACGATGGATCTTCCACAGCCATCGTGCCCACTGATTTTGAAAGGGTTGTGCGAAAAGCCCAAGAAAAGAAAGAGAAGGTGGATGAGGACCAACTTAATATCAAGCCAAGGCATAAGGCGTTAAAGCTATCACGCAAGAGAAGAAAAATGAGCACTTGAGGGAGCGGGAAGAGATCCTCAAGGAAGTTGAGAAAATTCCTCTCTCTGTGGAGAAGGAAGCTCATAAGTCTCTTAGTGAGGAGATTGCAAAGGAATTTGAAAGGGAGCTTGATGCGATGAGCCCCCTAGAGGATGAAGTTGAGCAACCACATAAGAAAGCAATGCGAGTTGAGAAAGTAAGAGGTGAAAAGAAGGAAGCCCTGAGGGATCAAGTTGTCCGGCGAAGGGAGGAAAAAGCAAAGAGAAATATAGCAGCAAGGAACATGGATGATCAGAATGAAGAAGAAGAGATCACTTCCAAGAACATCAAGAAGTTCTTCAAGCTTTAG

mRNA sequence

ATGGTCGATCATAGATCTTCCATCTCTTCCTCTAAACACCGTCACTCTGATCGAAAATGGGAGCATCATTTGCATCAAGAACGGTCTGACAACCAAGAACGCCCTCAACCCAGCTGCATCCCCACAGCCAAAGAACTTAGGAGGATAGAAGATGAAGAAATCTTCAGGAGTTTGGACGACCTGAGCCGTACATCTGGAAAGGTTGCAAATGTGGGGGCAAAACGCAAGCACTCCATAAGGATGGATAAGGAGGACGCAGGCAAGCCATCTAACATCCAAGATCTGGATTTGGAGGATGAAGAAGTGGTTGTTGTGCTCGCAATGGTAAAAGCGGAGAGAGAAGAAAAGGTGAGAAAAGAAAGAGAGGAAGAAGAAAAGAAAAGAAAAGAAAAGGAAAGGAAAGAAAGGAAAAAGGTGGAAGAAAGGCGAGAGGAGGAAGAATGCCATGGTGAGCGTGTGCATCACGAAGAAAGGAATAAATGCGATAGGAGAGAGAAACGCGAGAAATTGAAAAAGCAAGGAAGTGAGCACGATGGATCTTCCACAGCCATCGTGCCCACTGATTTTGAAAGGGTTGTGCGAAAAGCCCAAGAAAAGAAAGAGAAGAAAAATGAGCACTTGAGGGAGCGGGAAGAGATCCTCAAGGAAGTTGAGAAAATTCCTCTCTCTGTGGAGAAGGAAGCTCATAAGTCTCTTAGTGAGGAGATTGCAAAGGAATTTGAAAGGGAGCTTGATGCGATGAGCCCCCTAGAGGATGAAGTTGAGCAACCACATAAGAAAGCAATGCGAGTTGAGAAAGTAAGAGGTGAAAAGAAGGAAGCCCTGAGGGATCAAGTTGTCCGGCGAAGGGAGGAAAAAGCAAAGAGAAATATAGCAGCAAGGAACATGGATGATCAGAATGAAGAAGAAGAGATCACTTCCAAGAACATCAAGAAGTTCTTCAAGCTTTAG

Coding sequence (CDS)

ATGGTCGATCATAGATCTTCCATCTCTTCCTCTAAACACCGTCACTCTGATCGAAAATGGGAGCATCATTTGCATCAAGAACGGTCTGACAACCAAGAACGCCCTCAACCCAGCTGCATCCCCACAGCCAAAGAACTTAGGAGGATAGAAGATGAAGAAATCTTCAGGAGTTTGGACGACCTGAGCCGTACATCTGGAAAGGTTGCAAATGTGGGGGCAAAACGCAAGCACTCCATAAGGATGGATAAGGAGGACGCAGGCAAGCCATCTAACATCCAAGATCTGGATTTGGAGGATGAAGAAGTGGTTGTTGTGCTCGCAATGGTAAAAGCGGAGAGAGAAGAAAAGGTGAGAAAAGAAAGAGAGGAAGAAGAAAAGAAAAGAAAAGAAAAGGAAAGGAAAGAAAGGAAAAAGGTGGAAGAAAGGCGAGAGGAGGAAGAATGCCATGGTGAGCGTGTGCATCACGAAGAAAGGAATAAATGCGATAGGAGAGAGAAACGCGAGAAATTGAAAAAGCAAGGAAGTGAGCACGATGGATCTTCCACAGCCATCGTGCCCACTGATTTTGAAAGGGTTGTGCGAAAAGCCCAAGAAAAGAAAGAGAAGAAAAATGAGCACTTGAGGGAGCGGGAAGAGATCCTCAAGGAAGTTGAGAAAATTCCTCTCTCTGTGGAGAAGGAAGCTCATAAGTCTCTTAGTGAGGAGATTGCAAAGGAATTTGAAAGGGAGCTTGATGCGATGAGCCCCCTAGAGGATGAAGTTGAGCAACCACATAAGAAAGCAATGCGAGTTGAGAAAGTAAGAGGTGAAAAGAAGGAAGCCCTGAGGGATCAAGTTGTCCGGCGAAGGGAGGAAAAAGCAAAGAGAAATATAGCAGCAAGGAACATGGATGATCAGAATGAAGAAGAAGAGATCACTTCCAAGAACATCAAGAAGTTCTTCAAGCTTTAG

Protein sequence

MVDHRSSISSSKHRHSDRKWEHHLHQERSDNQERPQPSCIPTAKELRRIEDEEIFRSLDDLSRTSGKVANVGAKRKHSIRMDKEDAGKPSNIQDLDLEDEEVVVVLAMVKAEREEKVRKEREEEEKKRKEKERKERKKVEERREEEECHGERVHHEERNKCDRREKREKLKKQGSEHDGSSTAIVPTDFERVVRKAQEKKEKKNEHLREREEILKEVEKIPLSVEKEAHKSLSEEIAKEFERELDAMSPLEDEVEQPHKKAMRVEKVRGEKKEALRDQVVRRREEKAKRNIAARNMDDQNEEEEITSKNIKKFFKL
Homology
[Close]
BLAST of PI0002301 vs. ExPASy TrEMBL
Match: A0A5D3BNL6 (Protein MNN4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1923G00100 PE=4 SV=1)

HSP 1 Score: 77.4 bits (189), Expect = 1.2e-10
Identity = 76/187 (40.64%), Postives = 116/187 (62.03%), Query Frame = 0 

Query: 92  IQDLDLEDEEVVVVLAMVKAEREEKVRK-EREEEEKKRKEKERKERKKVEERREEEECHG 151
           ++D ++++E+V  VL + K  ++ + +K E+E  EK+R+EKERK ++K +ERR       
Sbjct: 8   LKDKNVDEEDVADVLELAKTRKKAREKKEEKERREKERREKERKAKEKEKERR------- 67

Query: 152 ERVHHEERNKCDRREKREKLKKQG-SEHDGSSTAIVPTDFERVVRKAQEKK--------- 211
                ++RN+ +RR K E+LKKQG  E   SS +I PT+FERV RKAQ+KK         
Sbjct: 68  -----KKRNEEERRRK-EELKKQGKKEKVQSSPSIAPTEFERVARKAQKKKEKVVSGLLK 127

Query: 212 -------------EKKNEHLREREEILKEVEKIPLSVEKEAHK-SLSEEIAKEFERELDA 254
                        EKK   LRE+EE+L +++K+PL  +K   K +LSEE+ +EF+RELD 
Sbjct: 128 MKVIVQGAKALTQEKKEVKLREQEELLNKIDKVPLFAKKRKVKNTLSEELVEEFKRELDN 181

[Close]
BLAST of PI0002301 vs. NCBI nr
Match: TYK00332.1 (protein MNN4-like [Cucumis melo var. makuwa])

HSP 1 Score: 77.4 bits (189), Expect = 2.4e-10
Identity = 76/187 (40.64%), Postives = 116/187 (62.03%), Query Frame = 0 

Query: 92  IQDLDLEDEEVVVVLAMVKAEREEKVRK-EREEEEKKRKEKERKERKKVEERREEEECHG 151
           ++D ++++E+V  VL + K  ++ + +K E+E  EK+R+EKERK ++K +ERR       
Sbjct: 8   LKDKNVDEEDVADVLELAKTRKKAREKKEEKERREKERREKERKAKEKEKERR------- 67

Query: 152 ERVHHEERNKCDRREKREKLKKQG-SEHDGSSTAIVPTDFERVVRKAQEKK--------- 211
                ++RN+ +RR K E+LKKQG  E   SS +I PT+FERV RKAQ+KK         
Sbjct: 68  -----KKRNEEERRRK-EELKKQGKKEKVQSSPSIAPTEFERVARKAQKKKEKVVSGLLK 127

Query: 212 -------------EKKNEHLREREEILKEVEKIPLSVEKEAHK-SLSEEIAKEFERELDA 254
                        EKK   LRE+EE+L +++K+PL  +K   K +LSEE+ +EF+RELD 
Sbjct: 128 MKVIVQGAKALTQEKKEVKLREQEELLNKIDKVPLFAKKRKVKNTLSEELVEEFKRELDN 181

The following BLAST results are available for this feature:
BLAST of PI0002301 vs.
Match NameE-valueIdentityDescription
BLAST of PI0002301 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5D3BNL61.2e-1040.64Protein MNN4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1923G0... [more]
BLAST of PI0002301 vs. NCBI nr
Match NameE-valueIdentityDescription
TYK00332.12.4e-1040.64protein MNN4-like [Cucumis melo var. makuwa][more]
BLAST of PI0002301 vs. NCBI nr
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 282..302
NoneNo IPR availableCOILSCoilCoilcoord: 189..217
NoneNo IPR availableCOILSCoilCoilcoord: 106..149
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 75..93
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 247..305
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 112..176
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..43
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 112..190
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..32
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 58..93

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
PI0002301.1PI0002301.1mRNA