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PI0002265 (gene) Melon (PI 482460) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGAAGTCTCCTAAGGCTAGGATTGTCATCAAGGAAAATCACTTGTATGATAACTCTAATTCTGCCTCTAGCAGATCAAAGAAGGAATCACACTTTGATGTGATGTCTATCATGATGGCTGATGTAACAGGTGTGACTGCCATGACAAAGATGGAAAGGAAAATCAATCTCCTGATGAAAGTTATCAAGGAGCGAGACCACGAAATCGCAGCTTTGAGAGAGCAAATGCAGACTCGTGAATTGTTGAGTCGAGTCAATCTCTTATTGTCAAAGCTGGTGACAAAGGGAAAACCAACTATAACAACAATCAGCTTCTGTTGCTTCCCTTTTAGTAGCAACTACAAAATATGATCGCAAACTTCATCAGAGCTCAGTATGGAGGCTCGACCCTGACCTCTTTCATGTACTTTAAGCCGTACACCAAAAGAATCGACAACTTGAGAATGCCACTTGAGTACCAGCCTCCAAAGTTCCAATAGTTCGATGAAAAGGGCAACCCTAAGCAGCACATCGCCCACTTCGTCGAAACATGCGAGAATGCAGGATCAAGAGGAGACCAACTGGTTAGATAATTCGTTCAAAGCTTGAAAGGAAATGCTTTCAAGTGGTACACAGACCTGGACCCCGAAGTGATTGATAGTTTGGAACAACTAGAAAAAGAGTTCCTAAATCGCTTCTATAGCACCAGACGCAACGTAAGTATGATGGAGCTTACAAACACAAAACAATGAAAGGGAGAGCCAGTCATCGACTACATCAACCGATGGAGAGCTCTGAGTCTTGACTGCAAGGATCGACTCACCAAACTGTATGCTGTAGAAATGTACACCCAAGGTATGCATTGAGGGCTTCTCTACATTCTGCTGGGAATAAAGCCCCACACATTTGAAGGGTTGGCAACTCGCGCTCATGATATGGAGTTGAGCATTACTAGTAGGGGAACTAAGAATTTTGTTGCTCTTGAAGTAAAGAAGGACAAGAAAGAGATGAAAGGCACTGAAAAGATAGTGAAGAGCGTCCTGAAGGAATCTATGGTCGTAAACACGACCCCGCTGAAGTTCTCTAAAAGGAAGGAAGTGAAAGTTGAAAAGAAAGATGATGAAGGCGAGAAATGTCGCCTAACTTTGAAGGAAAGACAGGAAAAAGTTTACCCATTTTCTGATTCAGATACTGCAGACATGCTAGAGCTACTACTGGAGAAGCAGCTAATCCAGCTACCGGAATGTAAACCACTTGAGCAAGCAAGGAAGGTAGATGATCCCAACTACTGCAAGTATCATCGGTTCATCAGTCACTCGATAGAGAAATGTTTTGTGTTGAAGGAGCTAATTCTACGGTTGGCTCGTGAGAAAAAGATCGAGCTAGACTTGGAGGAAGTAGCTCAAACAAACCATGTTGTAGTGACGATAATGTTGGATGTTCCTCCATTAACATCAAAGTTTAAGCAAAGAGAAAGACTGGTCCAATTCAGGACCTATGAGCTTGTGGTTGTTTGATTCCAGCAGAAAATTATGTTGGAAGATTCTAAAAATAAGAAAGATCAATTGAAAAGAACGACGAAGGGTGGATAGTTGTGACCCGTCAAAAGAAAAGACAACTAAATCCTGTTAAAAAAGAGTCCTGCTCCTATAAAATTATAGGAGAGGGAACATGACTAAAAAAAGTAAGAAGAAGAGGAAGACTTGGAAGCCTAAGCTTGTGTAGAGGGAAGATGAGGATTCTCCTTGACCTCAGTGCCTAGTAAAATTGGCAGACTTCCTTCCAACAAACTTTCTCTGTGATCATTAGGATGAAGTTCCAGAAATCATTGCGTGTCATGCTATCAACGTGATAGAGGAAGAAAACATCTCTCTAAGATCACTAGAGGAAGAGAGAGTGTCAAAAGACCTGTCGATGTTCAATGTGGATGATCTGTTATCACTTCCTCAAGAAACCAAGAGCATCCTTATTGATGTATTGTTAAATTCAAGAGCATCAAGTTTGAGTGCTCCGACCTCTACGACACACGAGAGTGCTTCTTATTGTATGTCTATAGGCTTCTCAAATGAGGATCTGTTGTTGGGGTCCAAACTTCATAATAGACCCTTGTATGTTAAGGATACGTTCGAGTATAGAGAGTTGACCAGATTCTCATCGGTAATGGATCAGTTGTCAACATAA ATGAAGTCTCCTAAGGCTAGGATTGTCATCAAGGAAAATCACTTGTATGATAACTCTAATTCTGCCTCTAGCAGATCAAAGAAGGAATCACACTTTGATGTGATGTCTATCATGATGGCTGATGTAACAGGTGTGACTGCCATGACAAAGATGGAAAGGAAAATCAATCTCCTGATGAAAGTTATCAAGGAGCGAGACCACGAAATCGCAGCTTTGAGAGAGCAAATGCAGACTCGTGAATTGTTGAGTCGAGTCAATCTCTTATTGTCAAAGCTGGATGAAGTTCCAGAAATCATTGCGTGTCATGCTATCAACGTGATAGAGGAAGAAAACATCTCTCTAAGATCACTAGAGGAAGAGAGAGTGTCAAAAGACCTGTCGATGTTCAATGTGGATGATCTGTTATCACTTCCTCAAGAAACCAAGAGCATCCTTATTGATGTATTGTTAAATTCAAGAGCATCAAGTTTGAGTGCTCCGACCTCTACGACACACGAGAGTGCTTCTTATTGTATGTCTATAGGCTTCTCAAATGAGGATCTGTTGTTGGGGTCCAAACTTCATAATAGACCCTTGTATGTTAAGGATACGTTCGAGTATAGAGAGTTGACCAGATTCTCATCGGTAATGGATCAGTTGTCAACATAA ATGAAGTCTCCTAAGGCTAGGATTGTCATCAAGGAAAATCACTTGTATGATAACTCTAATTCTGCCTCTAGCAGATCAAAGAAGGAATCACACTTTGATGTGATGTCTATCATGATGGCTGATGTAACAGGTGTGACTGCCATGACAAAGATGGAAAGGAAAATCAATCTCCTGATGAAAGTTATCAAGGAGCGAGACCACGAAATCGCAGCTTTGAGAGAGCAAATGCAGACTCGTGAATTGTTGAGTCGAGTCAATCTCTTATTGTCAAAGCTGGATGAAGTTCCAGAAATCATTGCGTGTCATGCTATCAACGTGATAGAGGAAGAAAACATCTCTCTAAGATCACTAGAGGAAGAGAGAGTGTCAAAAGACCTGTCGATGTTCAATGTGGATGATCTGTTATCACTTCCTCAAGAAACCAAGAGCATCCTTATTGATGTATTGTTAAATTCAAGAGCATCAAGTTTGAGTGCTCCGACCTCTACGACACACGAGAGTGCTTCTTATTGTATGTCTATAGGCTTCTCAAATGAGGATCTGTTGTTGGGGTCCAAACTTCATAATAGACCCTTGTATGTTAAGGATACGTTCGAGTATAGAGAGTTGACCAGATTCTCATCGGTAATGGATCAGTTGTCAACATAA MKSPKARIVIKENHLYDNSNSASSRSKKESHFDVMSIMMADVTGVTAMTKMERKINLLMKVIKERDHEIAALREQMQTRELLSRVNLLLSKLDEVPEIIACHAINVIEEENISLRSLEEERVSKDLSMFNVDDLLSLPQETKSILIDVLLNSRASSLSAPTSTTHESASYCMSIGFSNEDLLLGSKLHNRPLYVKDTFEYRELTRFSSVMDQLST Homology
BLAST of PI0002265 vs. ExPASy TrEMBL
Match: A0A5A7UMP5 (Ty3-gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1142G00440 PE=4 SV=1) HSP 1 Score: 154.1 bits (388), Expect = 6.8e-34 Identity = 84/121 (69.42%), Postives = 99/121 (81.82%), Query Frame = 0
BLAST of PI0002265 vs. ExPASy TrEMBL
Match: A0A5A7UMP5 (Ty3-gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1142G00440 PE=4 SV=1) HSP 1 Score: 65.5 bits (158), Expect = 3.2e-07 Identity = 33/46 (71.74%), Postives = 39/46 (84.78%), Query Frame = 0
HSP 2 Score: 149.8 bits (377), Expect = 1.3e-32 Identity = 131/408 (32.11%), Postives = 160/408 (39.22%), Query Frame = 0
BLAST of PI0002265 vs. ExPASy TrEMBL
Match: A0A5A7TG25 (Ty3-gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold124G00350 PE=4 SV=1) HSP 1 Score: 148.3 bits (373), Expect = 3.7e-32 Identity = 86/130 (66.15%), Postives = 96/130 (73.85%), Query Frame = 0
BLAST of PI0002265 vs. ExPASy TrEMBL
Match: A0A5A7SZ85 (Ty3-gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold349G00850 PE=4 SV=1) HSP 1 Score: 148.3 bits (373), Expect = 3.7e-32 Identity = 87/145 (60.00%), Postives = 103/145 (71.03%), Query Frame = 0
BLAST of PI0002265 vs. ExPASy TrEMBL
Match: A0A5D3BE72 (Ty3-gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold690G00360 PE=4 SV=1) HSP 1 Score: 147.9 bits (372), Expect = 4.9e-32 Identity = 90/149 (60.40%), Postives = 106/149 (71.14%), Query Frame = 0
BLAST of PI0002265 vs. NCBI nr
Match: KAA0054831.1 (ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa] >TYK27777.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 154.1 bits (388), Expect = 1.4e-33 Identity = 84/121 (69.42%), Postives = 99/121 (81.82%), Query Frame = 0
BLAST of PI0002265 vs. NCBI nr
Match: KAA0054831.1 (ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa] >TYK27777.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 65.5 bits (158), Expect = 6.5e-07 Identity = 33/46 (71.74%), Postives = 39/46 (84.78%), Query Frame = 0
HSP 2 Score: 149.8 bits (377), Expect = 2.6e-32 Identity = 131/408 (32.11%), Postives = 160/408 (39.22%), Query Frame = 0
BLAST of PI0002265 vs. NCBI nr
Match: KAA0035943.1 (ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa] >TYK30459.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 148.3 bits (373), Expect = 7.7e-32 Identity = 87/145 (60.00%), Postives = 103/145 (71.03%), Query Frame = 0
BLAST of PI0002265 vs. NCBI nr
Match: KAA0042173.1 (ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa] >TYK26748.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 148.3 bits (373), Expect = 7.7e-32 Identity = 86/130 (66.15%), Postives = 96/130 (73.85%), Query Frame = 0
BLAST of PI0002265 vs. NCBI nr
Match: KAA0056780.1 (ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa] >TYJ97603.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 147.9 bits (372), Expect = 1.0e-31 Identity = 90/149 (60.40%), Postives = 106/149 (71.14%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
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