PI0001936 (gene) Melon (PI 482460) v1

Overview


Name	PI0001936
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	Polynucleotidyl transferase ribonuclease H-like superfamily protein
Location	chr07: 21769048 .. 21772214 (-)
RNA-Seq Expression	PI0001936
Synteny	PI0001936

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAGTTCAAATTTAAGCCGTTGATAAATAAAAATGAAATAATTTTGGGTAATAGCCCTTCGATTTTTCAATGATTATTAGTATATCGTTGCTGCTGCAGAATTCGACCACTCCAACGTCCGTCGTCTTCCCCTGCTCCAGTCGACCGTCGGAGTGTACACTGTACGTCATCCACTATCTTCCGTTCATTTCAATTCGATGTTTCTGAGAGCTTCGCTGCTTAAGCTTTCATCATTCTACTCAATCCCATGTCGTCATCCTCTGCTTCCCTTCTCTCTCTCTTCCTCAATTTGTTCTTCTCCTCGCACACCTTTCTCTATCCGATGCCATTCAGCTCTCCCCATATCCCACGAACCATCTTCTTCAGCTCCCTCTGAATTCCCCGATGTGGCGGATAATCGTTGGAGGCCCACGTGTTTGTATTTCACACATGGCAAGTGCACAATGGTATTTTTCAATTCCGGTTTTTGTTGCAGCAATTGCGTTTTTCGAATGCTTTTATATTTTCTTTCCTTCCATTTTGTGAAATGATTGAAGATTCTATTTGACTGTGGATGCTAAGTTGTTGGTTTGGTGTTGACTGTGGATGCTAAGTTGTTGGTTTGGTGTTGTACACCACATGTTTGACGATATTCCTCACAGAGCTTTTGCTCGTTTTTGCTGCGTGTTAAGCTGTCTAGTAGTCGGTTTTTGATTAGGAACTCCATAATTTGAGAATTAGACAGGTAAGATAATCGACATATCTTTTTAATTCTAAAAGTGGATAATTTGTATCCCATCTGAACAAAATAGGAAATATTGGAATTCTAGAAAAGTTTACGAATGTACAACCATTTTTCACTTTTGATCAGGCTCTTGTCTCATGTTGTGTGTTCTGATGGTTTTGATTGGATTTCCCCAGCTGAAATTTCGCAGAAACATTTAGATATTTATTGTCTTATGTTGTGTAGATGGATGATCCACTCCACATAAAGAAGTTCAATCATGATATCTCCAGGGAGCTTCAGGTAGATGTTGCTAGGTCAAATCATATGCGAACTCAGGACGTTGATTATTTTCTGGTGCTTGATTTGGAGGGTAAAGTTGAAATTATTGAGTTTCCAGTCATATTAGTCAATGCCAAGACAATGGGTGTGACAGGTTTTTTCCACAGGTTCTACATGCTTCTTTACAACGTGCTCATTTTTGCTATTGGTTATGCATCAATTTCTTTTTCCACTTGGCAGATTATATATTTAATGCATCTCTATATTCCCCTATTACCTGTTTTTCTTCTTAATAGACAAAATAATCTCAAATAGAATATAGAAGGAATTACCTGAATATCCGCACTAAGATATTAGATACTGATGCCTTACTACCCCTTTACCTTACATTTCTGATGGGCATATGAGTAATATAAGTATGGTTGAGAGATGACATTGATCGGCTTGTTATGTTTGTAACCCAATCATGTAAAATGATTTAACTTCCAAGAATGTCAACAAGTTCTTTGGGTGATTAAGAAGAAGATATTTATATTTTTTCCTTTTTGGTTGCCATGTTTGCTGACCATTGCTTTAAATCCTTGCTCAGGTTTGTTAGGCCATCAAGAATGAGTGAACAAAGAATAAATGAATACATTGAAGGAAAATATGGCAAGTTTGGAGTTGACCGGTAGGCTTCTAATCTTGTATGGTGAAGGCTTGATAATGTTTGACATTATTGTGCTTCATTTAGTTATGGTGAAGGCTTGCTAGACTTTTGAATGTTTTTAACAATCTGATTGTATGACGTATTGATGTACATGTCCAATGCTAATTTGGTAGGACAAATTTTTCTGCAGTATGTTCACACCTCCCGTTAATATTCTAATGCAACTTTTTTTTACTAGCTGATAGTTCCATATTATAATTCACAGTGTCTGGCATGACACAGCCATACTGTATGAGGATGTTATTCAACAGTTCGAAGATTGGCTGGTTCAGCATCAGCTATGGAGGAAGGAACTGGGCGGTGTTCTTGATCGAGCAGCATTTGTGACATGGCAAGCCTCCTTTTCTTGACTACTTTTACGTTCCTTCCTAAATTGGTCATTTCTTCATATTGTTAATGTGCTATGTCTATCAGGAGTTTGCCCAGCAACCACTAGGTCTTTTCACCCTTATAACGTTAAGGTTTGATTATCTAATGATTCATTCTCTTTTACTTCTACCAGTGGCAACTGGGATATAAAAACTCAGGTCCCACATCAATGTAACGTGTCGAAGATGAAACTTCCTGACTATTTTATGGAGTGGATCAACATTAAAGATGTCTATCTTAACTTTTACGGAAAAAAGGTACAACAATCCTGTCAAAATAACAGTTCGTAGCATCTTGAGTGGCTTTATTGTTCTGTTGTCAAGAGAGAAACACATTATTTTACTTTTAGGAGTCAGAATTATGAAATCAATCTGCTGCTGATCGCTTCGCTTTTCTTCAACTGCTTGGATAGATTATATCACAAGCATTTCAAAACGCAATACATTGGTTTAGAATTATCAAAACAGAGTTCAACATTCATTATTCCACACGGGAAAGACTTGAATGAAGATGATGTTCTCTGTTAGACTTACCCATAACATAACAATGTAATTGATTGCTTTAGCTGCTATGGTTCGCTACACGCCATAATTTGTTTAGTTTCTCTGAGATCGAATCTTACATGACCAATTATTGATGAAGTTGTTTACTTTGGATGGTAATTGGTAGGCAACGGGAATGGCGACGATGATGAGACAACTCGAAATGCCCTTGGTGGGAAGCCATCATCTTGGAATAGATGATACAAAGAACATCGTGAGAGTGTTGCAAAGAATGGTTGGTGATGGAGCACATTTGCAAATCACTGCTCGAAGGAATCCTAAATCTCCTCAACATGTTAAGTTTCTTTTTGAGAACCGTATTTAGTGGTGGCTATCTTCAGCAAGTTATCTTCCATATTTGTCTGGATGATCTATGGAATGGATAAATCTTAAAATAGATACTTCGGTCTCATGAATTGTAGATGTATCTGTCAATCAGTTCTGATGTGTTTCAAGTGTTGAAATTTGACCAAATGAAATATGTTACAATTCTAAATTTAAATTTTAGAAAATGTTGCAAATTTAAACCTTTGATAAGGTTTCGTTTGAAATATCATTAAAA

mRNA sequence

AAAGTTCAAATTTAAGCCGTTGATAAATAAAAATGAAATAATTTTGGGTAATAGCCCTTCGATTTTTCAATGATTATTAGTATATCGTTGCTGCTGCAGAATTCGACCACTCCAACGTCCGTCGTCTTCCCCTGCTCCAGTCGACCGTCGGAGTGTACACTGTACGTCATCCACTATCTTCCGTTCATTTCAATTCGATGTTTCTGAGAGCTTCGCTGCTTAAGCTTTCATCATTCTACTCAATCCCATGTCGTCATCCTCTGCTTCCCTTCTCTCTCTCTTCCTCAATTTGTTCTTCTCCTCGCACACCTTTCTCTATCCGATGCCATTCAGCTCTCCCCATATCCCACGAACCATCTTCTTCAGCTCCCTCTGAATTCCCCGATGTGGCGGATAATCGTTGGAGGCCCACGTGTTTGTATTTCACACATGGCAAGTGCACAATGATGGATGATCCACTCCACATAAAGAAGTTCAATCATGATATCTCCAGGGAGCTTCAGGTAGATGTTGCTAGGTCAAATCATATGCGAACTCAGGACGTTGATTATTTTCTGGTGCTTGATTTGGAGGGTAAAGTTGAAATTATTGAGTTTCCAGTCATATTAGTCAATGCCAAGACAATGGGTGTGACAGGTTTTTTCCACAGGTTTGTTAGGCCATCAAGAATGAGTGAACAAAGAATAAATGAATACATTGAAGGAAAATATGGCAAGTTTGGAGTTGACCGTGTCTGGCATGACACAGCCATACTGTATGAGGATGTTATTCAACAGTTCGAAGATTGGCTGGTTCAGCATCAGCTATGGAGGAAGGAACTGGGCGGTGTTCTTGATCGAGCAGCATTTGTGACATGTGGCAACTGGGATATAAAAACTCAGGTCCCACATCAATGTAACGTGTCGAAGATGAAACTTCCTGACTATTTTATGGAGTGGATCAACATTAAAGATGTCTATCTTAACTTTTACGGAAAAAAGGCAACGGGAATGGCGACGATGATGAGACAACTCGAAATGCCCTTGGTGGGAAGCCATCATCTTGGAATAGATGATACAAAGAACATCGTGAGAGTGTTGCAAAGAATGGTTGGTGATGGAGCACATTTGCAAATCACTGCTCGAAGGAATCCTAAATCTCCTCAACATGTTAAGTTTCTTTTTGAGAACCGTATTTAGTGGTGGCTATCTTCAGCAAGTTATCTTCCATATTTGTCTGGATGATCTATGGAATGGATAAATCTTAAAATAGATACTTCGGTCTCATGAATTGTAGATGTATCTGTCAATCAGTTCTGATGTGTTTCAAGTGTTGAAATTTGACCAAATGAAATATGTTACAATTCTAAATTTAAATTTTAGAAAATGTTGCAAATTTAAACCTTTGATAAGGTTTCGTTTGAAATATCATTAAAA

Coding sequence (CDS)

ATGTTTCTGAGAGCTTCGCTGCTTAAGCTTTCATCATTCTACTCAATCCCATGTCGTCATCCTCTGCTTCCCTTCTCTCTCTCTTCCTCAATTTGTTCTTCTCCTCGCACACCTTTCTCTATCCGATGCCATTCAGCTCTCCCCATATCCCACGAACCATCTTCTTCAGCTCCCTCTGAATTCCCCGATGTGGCGGATAATCGTTGGAGGCCCACGTGTTTGTATTTCACACATGGCAAGTGCACAATGATGGATGATCCACTCCACATAAAGAAGTTCAATCATGATATCTCCAGGGAGCTTCAGGTAGATGTTGCTAGGTCAAATCATATGCGAACTCAGGACGTTGATTATTTTCTGGTGCTTGATTTGGAGGGTAAAGTTGAAATTATTGAGTTTCCAGTCATATTAGTCAATGCCAAGACAATGGGTGTGACAGGTTTTTTCCACAGGTTTGTTAGGCCATCAAGAATGAGTGAACAAAGAATAAATGAATACATTGAAGGAAAATATGGCAAGTTTGGAGTTGACCGTGTCTGGCATGACACAGCCATACTGTATGAGGATGTTATTCAACAGTTCGAAGATTGGCTGGTTCAGCATCAGCTATGGAGGAAGGAACTGGGCGGTGTTCTTGATCGAGCAGCATTTGTGACATGTGGCAACTGGGATATAAAAACTCAGGTCCCACATCAATGTAACGTGTCGAAGATGAAACTTCCTGACTATTTTATGGAGTGGATCAACATTAAAGATGTCTATCTTAACTTTTACGGAAAAAAGGCAACGGGAATGGCGACGATGATGAGACAACTCGAAATGCCCTTGGTGGGAAGCCATCATCTTGGAATAGATGATACAAAGAACATCGTGAGAGTGTTGCAAAGAATGGTTGGTGATGGAGCACATTTGCAAATCACTGCTCGAAGGAATCCTAAATCTCCTCAACATGTTAAGTTTCTTTTTGAGAACCGTATTTAG

Protein sequence

MFLRASLLKLSSFYSIPCRHPLLPFSLSSSICSSPRTPFSIRCHSALPISHEPSSSAPSEFPDVADNRWRPTCLYFTHGKCTMMDDPLHIKKFNHDISRELQVDVARSNHMRTQDVDYFLVLDLEGKVEIIEFPVILVNAKTMGVTGFFHRFVRPSRMSEQRINEYIEGKYGKFGVDRVWHDTAILYEDVIQQFEDWLVQHQLWRKELGGVLDRAAFVTCGNWDIKTQVPHQCNVSKMKLPDYFMEWINIKDVYLNFYGKKATGMATMMRQLEMPLVGSHHLGIDDTKNIVRVLQRMVGDGAHLQITARRNPKSPQHVKFLFENRI

Homology

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BLAST of PI0001936 vs. ExPASy Swiss-Prot
Match: Q8W566 (Uncharacterized exonuclease domain-containing protein At3g15140 OS=Arabidopsis thaliana OX=3702 GN=At3g15140 PE=2 SV=1)

HSP 1 Score: 380.2 bits (975), Expect = 2.4e-104
Identity = 183/328 (55.79%), Postives = 241/328 (73.48%), Query Frame = 0


Query: 4   RASLLKLSSFYSIPCRHP--LLPFSLSSSICSSPRTPFSIRCHSALPISHEPSSSAPSEF 63
           R SL ++S F      +P  L        +C+S  +       S    S   SSS+PS F
Sbjct: 9   RVSLSRISPFRDTRFSYPATLALAHTKRIMCNSSHSVSPSPSPSDFSSSSSSSSSSPSTF 68

Query: 64  P--DVADN-RWRPTCLYFTHGKCTMMDDPLHIKKFNHDISRELQVDVARSNHMRTQDVDY 123
              + ++N RWRP CLY+THGKCT MDDP H++ FNHD S+EL+V  A     ++Q+ ++
Sbjct: 69  SLMETSENARWRPMCLYYTHGKCTKMDDPAHLEIFNHDCSKELRVAAADLERKKSQEFNF 128

Query: 124 FLVLDLEGKVEIIEFPVILVNAKTMGVTGFFHRFVRPSRMSEQRINEYIEGKYGKFGVDR 183
           FLV+DLEGKVEI+EFP+++V+AKTM V   FHRFVRP++MSEQ IN+YIEGKYG+ GVDR
Sbjct: 129 FLVIDLEGKVEILEFPILIVDAKTMEVVDLFHRFVRPTKMSEQAINKYIEGKYGELGVDR 188

Query: 184 VWHDTAILYEDVIQQFEDWLVQHQLWRKELGGVLDRAAFVTCGNWDIKTQVPHQCNVSKM 243
           VWHDTAI ++ V+++FE WL +H LW K+    L+ AAFVTCGNWDIKT++P QC VS +
Sbjct: 189 VWHDTAIPFKQVVEEFEVWLAEHDLWDKDTDWGLNDAAFVTCGNWDIKTKIPEQCVVSNI 248

Query: 244 KLPDYFMEWINIKDVYLNFYGKKATGMATMMRQLEMPLVGSHHLGIDDTKNIVRVLQRMV 303
            LP YFMEWIN+KDVYLNFYG++A GM +MMRQ  + L+GSHHLGIDDTKNI RV+QRM+
Sbjct: 249 NLPPYFMEWINLKDVYLNFYGREARGMVSMMRQCGIKLMGSHHLGIDDTKNITRVVQRML 308

Query: 304 GDGAHLQITARRNPKSPQHVKFLFENRI 327
            +GA L++TARR+  + ++V+FLF+NRI
Sbjct: 309 SEGAVLKLTARRSKSNMRNVEFLFKNRI 336

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BLAST of PI0001936 vs. ExPASy Swiss-Prot
Match: Q5FVR4 (3'-5' exoribonuclease 1 OS=Rattus norvegicus OX=10116 GN=Eri1 PE=2 SV=1)

HSP 1 Score: 110.9 bits (276), Expect = 2.7e-23
Identity = 63/205 (30.73%), Postives = 106/205 (51.71%), Query Frame = 0


Query: 117 DYFLVLDLEGKV----------EIIEFPVILVNAKTMGVTGFFHRFVRPSRMSEQRINEY 176
           DY  ++D E             EIIEFPV+L+N  ++ +   F ++VRP   S+  ++E+
Sbjct: 124 DYICIIDFEATCEEGNPAEFLHEIIEFPVVLLNTHSLEIEDTFQQYVRPEVNSQ--LSEF 183

Query: 177 IEGKYGKFGVDRVWHDTAILYEDVIQQFEDWLVQHQLWRKELGGVLDRAAFVTCGNWDIK 236
                G  G+ +   D A  +  V+++  +W+   +L      G   +   +T G+WD+ 
Sbjct: 184 C---IGLTGITQDQVDRADAFPQVLKKVIEWMKSKEL------GTKYKYCILTDGSWDMS 243

Query: 237 TQVPHQCNVSKMKLPDYFMEWINIKDVYLNFY--GKKATGMATMMRQLEMPLVGSHHLGI 296
             +  QC +S++K P +  +WINI+  Y NFY   +  T +  M+ +L M   G  H G+
Sbjct: 244 KFLNIQCQLSRLKYPSFAKKWINIRKSYGNFYKVPRSQTKLTIMLEKLGMDYDGRPHSGL 303

Query: 297 DDTKNIVRVLQRMVGDGAHLQITAR 310
           DD+KNI R+  RM+ DG  L+I  +
Sbjct: 304 DDSKNIARIAVRMLQDGCELRINEK 317

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BLAST of PI0001936 vs. ExPASy Swiss-Prot
Match: Q7TMF2 (3'-5' exoribonuclease 1 OS=Mus musculus OX=10090 GN=Eri1 PE=1 SV=2)

HSP 1 Score: 109.8 bits (273), Expect = 6.0e-23
Identity = 63/205 (30.73%), Postives = 105/205 (51.22%), Query Frame = 0


Query: 117 DYFLVLDLEGKV----------EIIEFPVILVNAKTMGVTGFFHRFVRPSRMSEQRINEY 176
           DY  ++D E             EIIEFPV+L+N  T+ +   F ++VRP      +++E+
Sbjct: 124 DYICIIDFEATCEEGNPAEFLHEIIEFPVVLLNTHTLEIEDTFQQYVRPE--VNAQLSEF 183

Query: 177 IEGKYGKFGVDRVWHDTAILYEDVIQQFEDWLVQHQLWRKELGGVLDRAAFVTCGNWDIK 236
                G  G+ +   D A  +  V+++  +W+   +L      G   +   +T G+WD+ 
Sbjct: 184 C---IGLTGITQDQVDRADAFPQVLKKVIEWMKSKEL------GTKYKYCILTDGSWDMS 243

Query: 237 TQVPHQCNVSKMKLPDYFMEWINIKDVYLNFY--GKKATGMATMMRQLEMPLVGSHHLGI 296
             +  QC +S++K P +  +WINI+  Y NFY   +  T +  M+ +L M   G  H G+
Sbjct: 244 KFLSIQCRLSRLKHPAFAKKWINIRKSYGNFYKVPRSQTKLTIMLEKLGMDYDGRPHSGL 303

Query: 297 DDTKNIVRVLQRMVGDGAHLQITAR 310
           DD+KNI R+  RM+ DG  L+I  +
Sbjct: 304 DDSKNIARIAVRMLQDGCELRINEK 317

[Close]

BLAST of PI0001936 vs. ExPASy Swiss-Prot
Match: Q8IV48 (3'-5' exoribonuclease 1 OS=Homo sapiens OX=9606 GN=ERI1 PE=1 SV=3)

HSP 1 Score: 108.6 bits (270), Expect = 1.3e-22
Identity = 62/205 (30.24%), Postives = 105/205 (51.22%), Query Frame = 0


Query: 117 DYFLVLDLEGKV----------EIIEFPVILVNAKTMGVTGFFHRFVRPSRMSEQRINEY 176
           DY  ++D E             EIIEFPV+L+N  T+ +   F ++VRP      +++++
Sbjct: 128 DYICIIDFEATCEEGNPPEFVHEIIEFPVVLLNTHTLEIEDTFQQYVRPE--INTQLSDF 187

Query: 177 IEGKYGKFGVDRVWHDTAILYEDVIQQFEDWLVQHQLWRKELGGVLDRAAFVTCGNWDIK 236
                   G+ +   D A  +  V+++  DW+   +L      G   + + +T G+WD+ 
Sbjct: 188 C---ISLTGITQDQVDRADTFPQVLKKVIDWMKLKEL------GTKYKYSLLTDGSWDMS 247

Query: 237 TQVPHQCNVSKMKLPDYFMEWINIKDVYLNFY--GKKATGMATMMRQLEMPLVGSHHLGI 296
             +  QC +S++K P +  +WINI+  Y NFY   +  T +  M+ +L M   G  H G+
Sbjct: 248 KFLNIQCQLSRLKYPPFAKKWINIRKSYGNFYKVPRSQTKLTIMLEKLGMDYDGRPHCGL 307

Query: 297 DDTKNIVRVLQRMVGDGAHLQITAR 310
           DD+KNI R+  RM+ DG  L+I  +
Sbjct: 308 DDSKNIARIAVRMLQDGCELRINEK 321

[Close]

BLAST of PI0001936 vs. ExPASy Swiss-Prot
Match: Q8C460 (ERI1 exoribonuclease 3 OS=Mus musculus OX=10090 GN=Eri3 PE=1 SV=1)

HSP 1 Score: 107.5 bits (267), Expect = 3.0e-22
Identity = 62/208 (29.81%), Postives = 105/208 (50.48%), Query Frame = 0


Query: 114 QDVDYFLVLDLEGKV--------EIIEFPVILVNAKTMGVTGFFHRFVRPSRMSEQRINE 173
           Q   YFLVLD E           EIIEFP++ +N +TM +   FH +V+P  +   ++  
Sbjct: 141 QRYHYFLVLDFEATCDKPQIHPQEIIEFPILKLNGRTMEIESTFHMYVQP--VVHPQLTP 200

Query: 174 YIEGKYGKFGVDRVWHDTAILYEDVIQQFEDWLVQHQLWRKELGGVLD---RAAFVTCGN 233
           +        G+ +   D     + V+++ ++W+ +         G+LD   ++ FVTCG+
Sbjct: 201 FCT---ELTGIIQAMVDGQPSLQQVLERVDEWMAKE--------GLLDPNVKSIFVTCGD 260

Query: 234 WDIKTQVPHQCNVSKMKLPDYFMEWINIKDVYLNFYG-KKATGMATMMRQLEMPLVGSHH 293
           WD+K  +P QC+   + + DYF +WIN+K  Y    G     G+  M + L +  +G  H
Sbjct: 261 WDLKVMLPGQCHYLGLPVADYFKQWINLKKAYSFAMGCWPKNGLLDMNKGLSLQHIGRPH 320

Query: 294 LGIDDTKNIVRVLQRMVGDGAHLQITAR 310
            GIDD KNI  +++ +   G   + T++
Sbjct: 321 SGIDDCKNIANIMKTLAYRGFIFKQTSK 335

[Close]

BLAST of PI0001936 vs. ExPASy TrEMBL
Match: A0A1S3CJV9 (uncharacterized exonuclease domain-containing protein At3g15140 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103501789 PE=4 SV=1)

HSP 1 Score: 657.9 bits (1696), Expect = 2.2e-185
Identity = 317/326 (97.24%), Postives = 320/326 (98.16%), Query Frame = 0


Query: 1   MFLRASLLKLSSFYSIPCRHPLLPFSLSSSICSSPRTPFSIRCHSALPISHEPSSSAPSE 60
           MFLRASLLKLSSFYSIPC HPLLP SLSSSICSSPRTPFSIRCHSALPISHEPSSSAPS+
Sbjct: 1   MFLRASLLKLSSFYSIPC-HPLLPVSLSSSICSSPRTPFSIRCHSALPISHEPSSSAPSQ 60

Query: 61  FPDVADNRWRPTCLYFTHGKCTMMDDPLHIKKFNHDISRELQVDVARSNHMRTQDVDYFL 120
           FPDVADNRWRPTCLYFTHG+CTMMDDPLHIKKFNHDISRELQVDVARSNHMRTQDVDYFL
Sbjct: 61  FPDVADNRWRPTCLYFTHGRCTMMDDPLHIKKFNHDISRELQVDVARSNHMRTQDVDYFL 120

Query: 121 VLDLEGKVEIIEFPVILVNAKTMGVTGFFHRFVRPSRMSEQRINEYIEGKYGKFGVDRVW 180
           VLDLEGKVEIIEFPVILVNAKTMGVTGFFHRFVRPSRMSE+RINEYIEGKYGKFGVDRVW
Sbjct: 121 VLDLEGKVEIIEFPVILVNAKTMGVTGFFHRFVRPSRMSEKRINEYIEGKYGKFGVDRVW 180

Query: 181 HDTAILYEDVIQQFEDWLVQHQLWRKELGGVLDRAAFVTCGNWDIKTQVPHQCNVSKMKL 240
           HDTAILY DVIQQFEDWLVQHQLWRKE GGVLDRAAFVTCGNWDIKTQVPHQCNVSKMKL
Sbjct: 181 HDTAILYNDVIQQFEDWLVQHQLWRKERGGVLDRAAFVTCGNWDIKTQVPHQCNVSKMKL 240

Query: 241 PDYFMEWINIKDVYLNFYGKKATGMATMMRQLEMPLVGSHHLGIDDTKNIVRVLQRMVGD 300
           PDYFMEWINIKDVYLNFYGKKATGMATMMRQLEM LVGSHHLGIDDTKNIVRVLQRMVGD
Sbjct: 241 PDYFMEWINIKDVYLNFYGKKATGMATMMRQLEMCLVGSHHLGIDDTKNIVRVLQRMVGD 300

Query: 301 GAHLQITARRNPKSPQHVKFLFENRI 327
           GAHLQITARRNPKSPQ VKFLFENRI
Sbjct: 301 GAHLQITARRNPKSPQQVKFLFENRI 325

[Close]

BLAST of PI0001936 vs. ExPASy TrEMBL
Match: A0A0A0L4N2 (Exonuclease domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G628930 PE=4 SV=1)

HSP 1 Score: 656.0 bits (1691), Expect = 8.3e-185
Identity = 314/326 (96.32%), Postives = 319/326 (97.85%), Query Frame = 0


Query: 1   MFLRASLLKLSSFYSIPCRHPLLPFSLSSSICSSPRTPFSIRCHSALPISHEPSSSAPSE 60
           MFLRASLLK SSFYSIPC HPLLP SLSSSICSSPRTPFSIRCHSA P+SHEPSSSA SE
Sbjct: 1   MFLRASLLKFSSFYSIPC-HPLLPVSLSSSICSSPRTPFSIRCHSAFPLSHEPSSSASSE 60

Query: 61  FPDVADNRWRPTCLYFTHGKCTMMDDPLHIKKFNHDISRELQVDVARSNHMRTQDVDYFL 120
           FPDVADNRWRPTCLYFTHG+CTMMDDPLHIKKFNHDISRELQVDVARSNHMRTQD DYFL
Sbjct: 61  FPDVADNRWRPTCLYFTHGRCTMMDDPLHIKKFNHDISRELQVDVARSNHMRTQDFDYFL 120

Query: 121 VLDLEGKVEIIEFPVILVNAKTMGVTGFFHRFVRPSRMSEQRINEYIEGKYGKFGVDRVW 180
           VLDLEGKVEIIEFPVILVNAKTMGVTGFFHRFVRPSRMSEQRINEYIEGKYGKFGVDRVW
Sbjct: 121 VLDLEGKVEIIEFPVILVNAKTMGVTGFFHRFVRPSRMSEQRINEYIEGKYGKFGVDRVW 180

Query: 181 HDTAILYEDVIQQFEDWLVQHQLWRKELGGVLDRAAFVTCGNWDIKTQVPHQCNVSKMKL 240
           HDTAILY+DVIQQFEDWLVQHQLWRKELGGVLDRAAFVTCGNWDIKTQVPHQC+VSKMKL
Sbjct: 181 HDTAILYKDVIQQFEDWLVQHQLWRKELGGVLDRAAFVTCGNWDIKTQVPHQCSVSKMKL 240

Query: 241 PDYFMEWINIKDVYLNFYGKKATGMATMMRQLEMPLVGSHHLGIDDTKNIVRVLQRMVGD 300
           PDYFMEWINIKDVYLNFY KKATGMATMMRQLEMPLVGSHHLGIDDTKNIVRVLQRMVGD
Sbjct: 241 PDYFMEWINIKDVYLNFYTKKATGMATMMRQLEMPLVGSHHLGIDDTKNIVRVLQRMVGD 300

Query: 301 GAHLQITARRNPKSPQHVKFLFENRI 327
           GAHLQ+TARRNPKSPQHVKFLFENRI
Sbjct: 301 GAHLQVTARRNPKSPQHVKFLFENRI 325

[Close]

BLAST of PI0001936 vs. ExPASy TrEMBL
Match: A0A6J1F6E0 (uncharacterized exonuclease domain-containing protein At3g15140 OS=Cucurbita moschata OX=3662 GN=LOC111442549 PE=4 SV=1)

HSP 1 Score: 600.9 bits (1548), Expect = 3.2e-168
Identity = 286/326 (87.73%), Postives = 303/326 (92.94%), Query Frame = 0


Query: 1   MFLRASLLKLSSFYSIPCRHPLLPFSLSSSICSSPRTPFSIRCHSALPISHEPSSSAPSE 60
           MF+RA LLK+SSFYSIPC H L+P  LSS+ICSSPRTP SIRCHS+LP +H+PSSSAPSE
Sbjct: 1   MFVRAPLLKVSSFYSIPC-HSLVPLYLSSAICSSPRTPLSIRCHSSLPTAHDPSSSAPSE 60

Query: 61  FPDVADNRWRPTCLYFTHGKCTMMDDPLHIKKFNHDISRELQVDVARSNHMRTQDVDYFL 120
             DV  NRWRP CLY+T  KCTMMDDPLHIKKFNHDISRELQVDVA S HMRTQD+++FL
Sbjct: 61  SLDVVHNRWRPMCLYYTQSKCTMMDDPLHIKKFNHDISRELQVDVASSKHMRTQDIEFFL 120

Query: 121 VLDLEGKVEIIEFPVILVNAKTMGVTGFFHRFVRPSRMSEQRINEYIEGKYGKFGVDRVW 180
           VLDLEGKVEIIEFPVILVNAKT+ VTGFFHRFVRPSRMSE+RINEYIEGKYGKFGVDRVW
Sbjct: 121 VLDLEGKVEIIEFPVILVNAKTLDVTGFFHRFVRPSRMSERRINEYIEGKYGKFGVDRVW 180

Query: 181 HDTAILYEDVIQQFEDWLVQHQLWRKELGGVLDRAAFVTCGNWDIKTQVPHQCNVSKMKL 240
           HDTAILY+DVIQQFEDWLV+HQLWRKELGGVLDRAAFVTCGNWDIKTQVPHQC+VS MKL
Sbjct: 181 HDTAILYKDVIQQFEDWLVEHQLWRKELGGVLDRAAFVTCGNWDIKTQVPHQCSVSNMKL 240

Query: 241 PDYFMEWINIKDVYLNFYGKKATGMATMMRQLEMPLVGSHHLGIDDTKNIVRVLQRMVGD 300
           PDYFMEWINIKDVYLNFY KKATGM TMMRQLE+PLVGSHHLGIDDTKNIVRVLQRMV D
Sbjct: 241 PDYFMEWINIKDVYLNFYQKKATGMTTMMRQLEIPLVGSHHLGIDDTKNIVRVLQRMVAD 300

Query: 301 GAHLQITARRNPKSPQHVKFLFENRI 327
           GAHLQITARRNP SPQHVKF FENRI
Sbjct: 301 GAHLQITARRNPNSPQHVKFRFENRI 325

[Close]

BLAST of PI0001936 vs. ExPASy TrEMBL
Match: A0A6J1IG11 (uncharacterized exonuclease domain-containing protein At3g15140 OS=Cucurbita maxima OX=3661 GN=LOC111476907 PE=4 SV=1)

HSP 1 Score: 600.1 bits (1546), Expect = 5.4e-168
Identity = 285/326 (87.42%), Postives = 304/326 (93.25%), Query Frame = 0


Query: 1   MFLRASLLKLSSFYSIPCRHPLLPFSLSSSICSSPRTPFSIRCHSALPISHEPSSSAPSE 60
           MF+RA LLK+SSFYSIPC H L+P SLSS+ICSSPRTP +IRCHS+LP +HEPSSSAPSE
Sbjct: 1   MFVRAPLLKVSSFYSIPC-HSLVPLSLSSAICSSPRTPLAIRCHSSLPTAHEPSSSAPSE 60

Query: 61  FPDVADNRWRPTCLYFTHGKCTMMDDPLHIKKFNHDISRELQVDVARSNHMRTQDVDYFL 120
             DV  NRWRP CLY+T  KCTMMDDPLHIKKFNHDISRELQVDVA S HMRTQD+++FL
Sbjct: 61  SLDVVHNRWRPMCLYYTQSKCTMMDDPLHIKKFNHDISRELQVDVASSKHMRTQDIEFFL 120

Query: 121 VLDLEGKVEIIEFPVILVNAKTMGVTGFFHRFVRPSRMSEQRINEYIEGKYGKFGVDRVW 180
           VLDLEGKVEIIEFPVILVNAKT+ VTGFFHRFVRPSRMSE+RINEYIEGKYGKFGVDRVW
Sbjct: 121 VLDLEGKVEIIEFPVILVNAKTLDVTGFFHRFVRPSRMSERRINEYIEGKYGKFGVDRVW 180

Query: 181 HDTAILYEDVIQQFEDWLVQHQLWRKELGGVLDRAAFVTCGNWDIKTQVPHQCNVSKMKL 240
           HDTAILY+DVIQQFEDWLV+HQ+WRK+LGGVLDRAAFVTCGNWDIKTQVPHQC+VS MKL
Sbjct: 181 HDTAILYKDVIQQFEDWLVEHQIWRKDLGGVLDRAAFVTCGNWDIKTQVPHQCSVSNMKL 240

Query: 241 PDYFMEWINIKDVYLNFYGKKATGMATMMRQLEMPLVGSHHLGIDDTKNIVRVLQRMVGD 300
           PDYFMEWINIKDVYLNFY KKATGMA MMRQLE+PLVGSHHLGIDDTKNIVRVLQRMV D
Sbjct: 241 PDYFMEWINIKDVYLNFYQKKATGMAMMMRQLEIPLVGSHHLGIDDTKNIVRVLQRMVAD 300

Query: 301 GAHLQITARRNPKSPQHVKFLFENRI 327
           GAHLQITARRNP SPQHVKF FENRI
Sbjct: 301 GAHLQITARRNPNSPQHVKFHFENRI 325

[Close]

BLAST of PI0001936 vs. ExPASy TrEMBL
Match: A0A6J1CCI3 (uncharacterized exonuclease domain-containing protein At3g15140 OS=Momordica charantia OX=3673 GN=LOC111010332 PE=4 SV=1)

HSP 1 Score: 567.8 bits (1462), Expect = 3.0e-158
Identity = 274/329 (83.28%), Postives = 300/329 (91.19%), Query Frame = 0


Query: 1   MFLRASLLKLSSFYSIPCRHPLLPFSLSSSICSSPRTPFSIRCHSALPISHEPSSSA-PS 60
           MFLRA LLK+SSFYSIPC +PL+P SL SS+ SS RTPF IRCH++LP +HEPSSSA P 
Sbjct: 1   MFLRAPLLKVSSFYSIPC-YPLVPLSLYSSVFSSSRTPFPIRCHASLPAAHEPSSSAPPP 60

Query: 61  EFPDVADNRWRPTCLYFTHGKCTMMDDPLHIKKFNHDISRELQVDVARSNHMRT--QDVD 120
             P+ ADNRWRP CLY+T GKCTMMDDPLH+KKFNHDISR LQV+ ARSNH RT  QD+D
Sbjct: 61  HSPEAADNRWRPMCLYYTQGKCTMMDDPLHLKKFNHDISRVLQVN-ARSNHTRTQSQDID 120

Query: 121 YFLVLDLEGKVEIIEFPVILVNAKTMGVTGFFHRFVRPSRMSEQRINEYIEGKYGKFGVD 180
           +FLVLDLEGKVEIIEFPVILV+AKT+GVTGFFHRFVRPS MSE+RINEYIEGKYGKFGVD
Sbjct: 121 FFLVLDLEGKVEIIEFPVILVSAKTLGVTGFFHRFVRPSNMSERRINEYIEGKYGKFGVD 180

Query: 181 RVWHDTAILYEDVIQQFEDWLVQHQLWRKELGGVLDRAAFVTCGNWDIKTQVPHQCNVSK 240
           RVWHDTAI Y++VIQQFEDWLV+HQLW+KELGG LDRAAFVTCGNWDIKTQVPHQC+VS 
Sbjct: 181 RVWHDTAISYKEVIQQFEDWLVEHQLWKKELGGCLDRAAFVTCGNWDIKTQVPHQCSVSN 240

Query: 241 MKLPDYFMEWINIKDVYLNFYGKKATGMATMMRQLEMPLVGSHHLGIDDTKNIVRVLQRM 300
           ++LP+YFMEWINIKDVYLNFY KKATGM TMMRQLE+PL+GSHHLGIDDTKNIVRVLQRM
Sbjct: 241 IELPNYFMEWINIKDVYLNFYQKKATGMTTMMRQLEIPLLGSHHLGIDDTKNIVRVLQRM 300

Query: 301 VGDGAHLQITARRNPKSPQHVKFLFENRI 327
           V DGA LQITARRNP SPQHVKFLFENRI
Sbjct: 301 VADGARLQITARRNPNSPQHVKFLFENRI 327

[Close]

BLAST of PI0001936 vs. NCBI nr
Match: XP_008463707.1 (PREDICTED: uncharacterized exonuclease domain-containing protein At3g15140 isoform X1 [Cucumis melo])

HSP 1 Score: 657.9 bits (1696), Expect = 4.5e-185
Identity = 317/326 (97.24%), Postives = 320/326 (98.16%), Query Frame = 0


Query: 1   MFLRASLLKLSSFYSIPCRHPLLPFSLSSSICSSPRTPFSIRCHSALPISHEPSSSAPSE 60
           MFLRASLLKLSSFYSIPC HPLLP SLSSSICSSPRTPFSIRCHSALPISHEPSSSAPS+
Sbjct: 1   MFLRASLLKLSSFYSIPC-HPLLPVSLSSSICSSPRTPFSIRCHSALPISHEPSSSAPSQ 60

Query: 61  FPDVADNRWRPTCLYFTHGKCTMMDDPLHIKKFNHDISRELQVDVARSNHMRTQDVDYFL 120
           FPDVADNRWRPTCLYFTHG+CTMMDDPLHIKKFNHDISRELQVDVARSNHMRTQDVDYFL
Sbjct: 61  FPDVADNRWRPTCLYFTHGRCTMMDDPLHIKKFNHDISRELQVDVARSNHMRTQDVDYFL 120

Query: 121 VLDLEGKVEIIEFPVILVNAKTMGVTGFFHRFVRPSRMSEQRINEYIEGKYGKFGVDRVW 180
           VLDLEGKVEIIEFPVILVNAKTMGVTGFFHRFVRPSRMSE+RINEYIEGKYGKFGVDRVW
Sbjct: 121 VLDLEGKVEIIEFPVILVNAKTMGVTGFFHRFVRPSRMSEKRINEYIEGKYGKFGVDRVW 180

Query: 181 HDTAILYEDVIQQFEDWLVQHQLWRKELGGVLDRAAFVTCGNWDIKTQVPHQCNVSKMKL 240
           HDTAILY DVIQQFEDWLVQHQLWRKE GGVLDRAAFVTCGNWDIKTQVPHQCNVSKMKL
Sbjct: 181 HDTAILYNDVIQQFEDWLVQHQLWRKERGGVLDRAAFVTCGNWDIKTQVPHQCNVSKMKL 240

Query: 241 PDYFMEWINIKDVYLNFYGKKATGMATMMRQLEMPLVGSHHLGIDDTKNIVRVLQRMVGD 300
           PDYFMEWINIKDVYLNFYGKKATGMATMMRQLEM LVGSHHLGIDDTKNIVRVLQRMVGD
Sbjct: 241 PDYFMEWINIKDVYLNFYGKKATGMATMMRQLEMCLVGSHHLGIDDTKNIVRVLQRMVGD 300

Query: 301 GAHLQITARRNPKSPQHVKFLFENRI 327
           GAHLQITARRNPKSPQ VKFLFENRI
Sbjct: 301 GAHLQITARRNPKSPQQVKFLFENRI 325

[Close]

BLAST of PI0001936 vs. NCBI nr
Match: XP_004146041.1 (uncharacterized exonuclease domain-containing protein At3g15140 isoform X1 [Cucumis sativus] >KGN55096.1 hypothetical protein Csa_012433 [Cucumis sativus])

HSP 1 Score: 656.0 bits (1691), Expect = 1.7e-184
Identity = 314/326 (96.32%), Postives = 319/326 (97.85%), Query Frame = 0


Query: 1   MFLRASLLKLSSFYSIPCRHPLLPFSLSSSICSSPRTPFSIRCHSALPISHEPSSSAPSE 60
           MFLRASLLK SSFYSIPC HPLLP SLSSSICSSPRTPFSIRCHSA P+SHEPSSSA SE
Sbjct: 1   MFLRASLLKFSSFYSIPC-HPLLPVSLSSSICSSPRTPFSIRCHSAFPLSHEPSSSASSE 60

Query: 61  FPDVADNRWRPTCLYFTHGKCTMMDDPLHIKKFNHDISRELQVDVARSNHMRTQDVDYFL 120
           FPDVADNRWRPTCLYFTHG+CTMMDDPLHIKKFNHDISRELQVDVARSNHMRTQD DYFL
Sbjct: 61  FPDVADNRWRPTCLYFTHGRCTMMDDPLHIKKFNHDISRELQVDVARSNHMRTQDFDYFL 120

Query: 121 VLDLEGKVEIIEFPVILVNAKTMGVTGFFHRFVRPSRMSEQRINEYIEGKYGKFGVDRVW 180
           VLDLEGKVEIIEFPVILVNAKTMGVTGFFHRFVRPSRMSEQRINEYIEGKYGKFGVDRVW
Sbjct: 121 VLDLEGKVEIIEFPVILVNAKTMGVTGFFHRFVRPSRMSEQRINEYIEGKYGKFGVDRVW 180

Query: 181 HDTAILYEDVIQQFEDWLVQHQLWRKELGGVLDRAAFVTCGNWDIKTQVPHQCNVSKMKL 240
           HDTAILY+DVIQQFEDWLVQHQLWRKELGGVLDRAAFVTCGNWDIKTQVPHQC+VSKMKL
Sbjct: 181 HDTAILYKDVIQQFEDWLVQHQLWRKELGGVLDRAAFVTCGNWDIKTQVPHQCSVSKMKL 240

Query: 241 PDYFMEWINIKDVYLNFYGKKATGMATMMRQLEMPLVGSHHLGIDDTKNIVRVLQRMVGD 300
           PDYFMEWINIKDVYLNFY KKATGMATMMRQLEMPLVGSHHLGIDDTKNIVRVLQRMVGD
Sbjct: 241 PDYFMEWINIKDVYLNFYTKKATGMATMMRQLEMPLVGSHHLGIDDTKNIVRVLQRMVGD 300

Query: 301 GAHLQITARRNPKSPQHVKFLFENRI 327
           GAHLQ+TARRNPKSPQHVKFLFENRI
Sbjct: 301 GAHLQVTARRNPKSPQHVKFLFENRI 325

[Close]

BLAST of PI0001936 vs. NCBI nr
Match: XP_038896828.1 (uncharacterized exonuclease domain-containing protein At3g15140 [Benincasa hispida])

HSP 1 Score: 625.9 bits (1613), Expect = 1.9e-175
Identity = 301/326 (92.33%), Postives = 310/326 (95.09%), Query Frame = 0


Query: 1   MFLRASLLKLSSFYSIPCRHPLLPFSLSSSICSSPRTPFSIRCHSALPISHEPSSSAPSE 60
           MFLRA LLKLS  YSIPC H L+P SLSSSICSS RTPF +RCHSALPISHEPSSS PSE
Sbjct: 1   MFLRAPLLKLSPIYSIPC-HSLVPLSLSSSICSS-RTPFDLRCHSALPISHEPSSSPPSE 60

Query: 61  FPDVADNRWRPTCLYFTHGKCTMMDDPLHIKKFNHDISRELQVDVARSNHMRTQDVDYFL 120
           FPDVADNRWRPTCLYFT GKCTMMDDPLHIKKFNHDIS ELQVDVARSNHMR QDVD+FL
Sbjct: 61  FPDVADNRWRPTCLYFTQGKCTMMDDPLHIKKFNHDISMELQVDVARSNHMRIQDVDFFL 120

Query: 121 VLDLEGKVEIIEFPVILVNAKTMGVTGFFHRFVRPSRMSEQRINEYIEGKYGKFGVDRVW 180
           VLDLEGKVEIIEFPVILVNAKTMGVTGFFHRFVRPSRMSEQRINEYIEGKYGKFGVDRVW
Sbjct: 121 VLDLEGKVEIIEFPVILVNAKTMGVTGFFHRFVRPSRMSEQRINEYIEGKYGKFGVDRVW 180

Query: 181 HDTAILYEDVIQQFEDWLVQHQLWRKELGGVLDRAAFVTCGNWDIKTQVPHQCNVSKMKL 240
           HDTAIL++DVIQ+FEDWLVQHQLWRKELGGVLDRAAFVTCGNWDIKTQ PHQC+VSKMKL
Sbjct: 181 HDTAILFKDVIQEFEDWLVQHQLWRKELGGVLDRAAFVTCGNWDIKTQAPHQCSVSKMKL 240

Query: 241 PDYFMEWINIKDVYLNFYGKKATGMATMMRQLEMPLVGSHHLGIDDTKNIVRVLQRMVGD 300
           PDYFMEWINIKDVYLNFY KKATGMATMMRQLE+PLVGSHHLGIDDTKNIVRV+QRMV D
Sbjct: 241 PDYFMEWINIKDVYLNFYNKKATGMATMMRQLEIPLVGSHHLGIDDTKNIVRVMQRMVAD 300

Query: 301 GAHLQITARRNPKSPQHVKFLFENRI 327
           GAHLQ TARRNPKSPQHVKFLFENRI
Sbjct: 301 GAHLQTTARRNPKSPQHVKFLFENRI 324

[Close]

BLAST of PI0001936 vs. NCBI nr
Match: XP_022935722.1 (uncharacterized exonuclease domain-containing protein At3g15140 [Cucurbita moschata])

HSP 1 Score: 600.9 bits (1548), Expect = 6.6e-168
Identity = 286/326 (87.73%), Postives = 303/326 (92.94%), Query Frame = 0


Query: 1   MFLRASLLKLSSFYSIPCRHPLLPFSLSSSICSSPRTPFSIRCHSALPISHEPSSSAPSE 60
           MF+RA LLK+SSFYSIPC H L+P  LSS+ICSSPRTP SIRCHS+LP +H+PSSSAPSE
Sbjct: 1   MFVRAPLLKVSSFYSIPC-HSLVPLYLSSAICSSPRTPLSIRCHSSLPTAHDPSSSAPSE 60

Query: 61  FPDVADNRWRPTCLYFTHGKCTMMDDPLHIKKFNHDISRELQVDVARSNHMRTQDVDYFL 120
             DV  NRWRP CLY+T  KCTMMDDPLHIKKFNHDISRELQVDVA S HMRTQD+++FL
Sbjct: 61  SLDVVHNRWRPMCLYYTQSKCTMMDDPLHIKKFNHDISRELQVDVASSKHMRTQDIEFFL 120

Query: 121 VLDLEGKVEIIEFPVILVNAKTMGVTGFFHRFVRPSRMSEQRINEYIEGKYGKFGVDRVW 180
           VLDLEGKVEIIEFPVILVNAKT+ VTGFFHRFVRPSRMSE+RINEYIEGKYGKFGVDRVW
Sbjct: 121 VLDLEGKVEIIEFPVILVNAKTLDVTGFFHRFVRPSRMSERRINEYIEGKYGKFGVDRVW 180

Query: 181 HDTAILYEDVIQQFEDWLVQHQLWRKELGGVLDRAAFVTCGNWDIKTQVPHQCNVSKMKL 240
           HDTAILY+DVIQQFEDWLV+HQLWRKELGGVLDRAAFVTCGNWDIKTQVPHQC+VS MKL
Sbjct: 181 HDTAILYKDVIQQFEDWLVEHQLWRKELGGVLDRAAFVTCGNWDIKTQVPHQCSVSNMKL 240

Query: 241 PDYFMEWINIKDVYLNFYGKKATGMATMMRQLEMPLVGSHHLGIDDTKNIVRVLQRMVGD 300
           PDYFMEWINIKDVYLNFY KKATGM TMMRQLE+PLVGSHHLGIDDTKNIVRVLQRMV D
Sbjct: 241 PDYFMEWINIKDVYLNFYQKKATGMTTMMRQLEIPLVGSHHLGIDDTKNIVRVLQRMVAD 300

Query: 301 GAHLQITARRNPKSPQHVKFLFENRI 327
           GAHLQITARRNP SPQHVKF FENRI
Sbjct: 301 GAHLQITARRNPNSPQHVKFRFENRI 325

[Close]

BLAST of PI0001936 vs. NCBI nr
Match: XP_022976542.1 (uncharacterized exonuclease domain-containing protein At3g15140 [Cucurbita maxima])

HSP 1 Score: 600.1 bits (1546), Expect = 1.1e-167
Identity = 285/326 (87.42%), Postives = 304/326 (93.25%), Query Frame = 0


Query: 1   MFLRASLLKLSSFYSIPCRHPLLPFSLSSSICSSPRTPFSIRCHSALPISHEPSSSAPSE 60
           MF+RA LLK+SSFYSIPC H L+P SLSS+ICSSPRTP +IRCHS+LP +HEPSSSAPSE
Sbjct: 1   MFVRAPLLKVSSFYSIPC-HSLVPLSLSSAICSSPRTPLAIRCHSSLPTAHEPSSSAPSE 60

Query: 61  FPDVADNRWRPTCLYFTHGKCTMMDDPLHIKKFNHDISRELQVDVARSNHMRTQDVDYFL 120
             DV  NRWRP CLY+T  KCTMMDDPLHIKKFNHDISRELQVDVA S HMRTQD+++FL
Sbjct: 61  SLDVVHNRWRPMCLYYTQSKCTMMDDPLHIKKFNHDISRELQVDVASSKHMRTQDIEFFL 120

Query: 121 VLDLEGKVEIIEFPVILVNAKTMGVTGFFHRFVRPSRMSEQRINEYIEGKYGKFGVDRVW 180
           VLDLEGKVEIIEFPVILVNAKT+ VTGFFHRFVRPSRMSE+RINEYIEGKYGKFGVDRVW
Sbjct: 121 VLDLEGKVEIIEFPVILVNAKTLDVTGFFHRFVRPSRMSERRINEYIEGKYGKFGVDRVW 180

Query: 181 HDTAILYEDVIQQFEDWLVQHQLWRKELGGVLDRAAFVTCGNWDIKTQVPHQCNVSKMKL 240
           HDTAILY+DVIQQFEDWLV+HQ+WRK+LGGVLDRAAFVTCGNWDIKTQVPHQC+VS MKL
Sbjct: 181 HDTAILYKDVIQQFEDWLVEHQIWRKDLGGVLDRAAFVTCGNWDIKTQVPHQCSVSNMKL 240

Query: 241 PDYFMEWINIKDVYLNFYGKKATGMATMMRQLEMPLVGSHHLGIDDTKNIVRVLQRMVGD 300
           PDYFMEWINIKDVYLNFY KKATGMA MMRQLE+PLVGSHHLGIDDTKNIVRVLQRMV D
Sbjct: 241 PDYFMEWINIKDVYLNFYQKKATGMAMMMRQLEIPLVGSHHLGIDDTKNIVRVLQRMVAD 300

Query: 301 GAHLQITARRNPKSPQHVKFLFENRI 327
           GAHLQITARRNP SPQHVKF FENRI
Sbjct: 301 GAHLQITARRNPNSPQHVKFHFENRI 325

[Close]

BLAST of PI0001936 vs. TAIR 10
Match: AT3G15140.1 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein )

HSP 1 Score: 380.2 bits (975), Expect = 1.7e-105
Identity = 183/328 (55.79%), Postives = 241/328 (73.48%), Query Frame = 0


Query: 4   RASLLKLSSFYSIPCRHP--LLPFSLSSSICSSPRTPFSIRCHSALPISHEPSSSAPSEF 63
           R SL ++S F      +P  L        +C+S  +       S    S   SSS+PS F
Sbjct: 9   RVSLSRISPFRDTRFSYPATLALAHTKRIMCNSSHSVSPSPSPSDFSSSSSSSSSSPSTF 68

Query: 64  P--DVADN-RWRPTCLYFTHGKCTMMDDPLHIKKFNHDISRELQVDVARSNHMRTQDVDY 123
              + ++N RWRP CLY+THGKCT MDDP H++ FNHD S+EL+V  A     ++Q+ ++
Sbjct: 69  SLMETSENARWRPMCLYYTHGKCTKMDDPAHLEIFNHDCSKELRVAAADLERKKSQEFNF 128

Query: 124 FLVLDLEGKVEIIEFPVILVNAKTMGVTGFFHRFVRPSRMSEQRINEYIEGKYGKFGVDR 183
           FLV+DLEGKVEI+EFP+++V+AKTM V   FHRFVRP++MSEQ IN+YIEGKYG+ GVDR
Sbjct: 129 FLVIDLEGKVEILEFPILIVDAKTMEVVDLFHRFVRPTKMSEQAINKYIEGKYGELGVDR 188

Query: 184 VWHDTAILYEDVIQQFEDWLVQHQLWRKELGGVLDRAAFVTCGNWDIKTQVPHQCNVSKM 243
           VWHDTAI ++ V+++FE WL +H LW K+    L+ AAFVTCGNWDIKT++P QC VS +
Sbjct: 189 VWHDTAIPFKQVVEEFEVWLAEHDLWDKDTDWGLNDAAFVTCGNWDIKTKIPEQCVVSNI 248

Query: 244 KLPDYFMEWINIKDVYLNFYGKKATGMATMMRQLEMPLVGSHHLGIDDTKNIVRVLQRMV 303
            LP YFMEWIN+KDVYLNFYG++A GM +MMRQ  + L+GSHHLGIDDTKNI RV+QRM+
Sbjct: 249 NLPPYFMEWINLKDVYLNFYGREARGMVSMMRQCGIKLMGSHHLGIDDTKNITRVVQRML 308

Query: 304 GDGAHLQITARRNPKSPQHVKFLFENRI 327
            +GA L++TARR+  + ++V+FLF+NRI
Sbjct: 309 SEGAVLKLTARRSKSNMRNVEFLFKNRI 336

The following BLAST results are available for this feature:

BLAST of PI0001936 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8W566	2.4e-104	55.79	Uncharacterized exonuclease domain-containing protein At3g15140 OS=Arabidopsis t...	[more]
Q5FVR4	2.7e-23	30.73	3'-5' exoribonuclease 1 OS=Rattus norvegicus OX=10116 GN=Eri1 PE=2 SV=1	[more]
Q7TMF2	6.0e-23	30.73	3'-5' exoribonuclease 1 OS=Mus musculus OX=10090 GN=Eri1 PE=1 SV=2	[more]
Q8IV48	1.3e-22	30.24	3'-5' exoribonuclease 1 OS=Homo sapiens OX=9606 GN=ERI1 PE=1 SV=3	[more]
Q8C460	3.0e-22	29.81	ERI1 exoribonuclease 3 OS=Mus musculus OX=10090 GN=Eri3 PE=1 SV=1	[more]

BLAST of PI0001936 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3CJV9	2.2e-185	97.24	uncharacterized exonuclease domain-containing protein At3g15140 isoform X1 OS=Cu...	[more]
A0A0A0L4N2	8.3e-185	96.32	Exonuclease domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G628930...	[more]
A0A6J1F6E0	3.2e-168	87.73	uncharacterized exonuclease domain-containing protein At3g15140 OS=Cucurbita mos...	[more]
A0A6J1IG11	5.4e-168	87.42	uncharacterized exonuclease domain-containing protein At3g15140 OS=Cucurbita max...	[more]
A0A6J1CCI3	3.0e-158	83.28	uncharacterized exonuclease domain-containing protein At3g15140 OS=Momordica cha...	[more]

BLAST of PI0001936 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008463707.1	4.5e-185	97.24	PREDICTED: uncharacterized exonuclease domain-containing protein At3g15140 isofo...	[more]
XP_004146041.1	1.7e-184	96.32	uncharacterized exonuclease domain-containing protein At3g15140 isoform X1 [Cucu...	[more]
XP_038896828.1	1.9e-175	92.33	uncharacterized exonuclease domain-containing protein At3g15140 [Benincasa hispi...	[more]
XP_022935722.1	6.6e-168	87.73	uncharacterized exonuclease domain-containing protein At3g15140 [Cucurbita mosch...	[more]
XP_022976542.1	1.1e-167	87.42	uncharacterized exonuclease domain-containing protein At3g15140 [Cucurbita maxim...	[more]

BLAST of PI0001936 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G15140.1	1.7e-105	55.79	Polynucleotidyl transferase, ribonuclease H-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013520	Exonuclease, RNase T/DNA polymerase III	PFAM	PF00929	RNase_T	coord: 123..294 e-value: 9.9E-10 score: 39.2
IPR036397	Ribonuclease H superfamily	GENE3D	3.30.420.10		coord: 106..324 e-value: 1.2E-57 score: 196.8
None	No IPR available	PANTHER	PTHR23044	3'-5' EXONUCLEASE ERI1-RELATED	coord: 21..326
None	No IPR available	PANTHER	PTHR23044:SF68	OS06G0353400 PROTEIN	coord: 21..326
None	No IPR available	CDD	cd06133	ERI-1_3'hExo_like	coord: 119..297 e-value: 7.12896E-51 score: 164.701
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 115..306

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0001936.1	PI0001936.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000467	exonucleolytic trimming to generate mature 3'-end of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
molecular_function	GO:0000175	3'-5'-exoribonuclease activity
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0016740	transferase activity