Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTACGATGTACCTATTGTACCTGCACCAGTTCAAAGGAGGCGTGCTCGAGTGCAAGAGCCTGATGAATTGGAAGAAGTTGAACAACAAGTGCAAGAAGTGCCTCCTGTGAGACAAACACAAAGCGGGACTGGTGACGTTAGTCCAATGATGATGATGTCGGCATTTGGAACAGGATATTATGATTCAGGAGTCGGTCAATCGTCAGACTTCGGGACAGGATATTATAATTCAGAGGCAGGTCCATCGTCGTCAAACTTTGGACAAGGATACTACGATTTAGGGACCGATCCATCGTCTTCATACATGCATGGACATGGACGTGGTCGTGGAGAACATAACGAATATTTGTATTACGAACCACCTGCAGCGGTACCCGAGCAGCCAGATGAGCAACAACAAGAGAATCAGGAGGGACTAGAGCAACAAAGAGTGCATGGTCGACGAGGCAACCAGCAAGAAATCGACGACGTCCAGGTTGTGGAACACATTGATTTTTTTTTTTAA
mRNA sequence
ATGTACGATGTACCTATTGTACCTGCACCAGTTCAAAGGAGGCGTGCTCGAGTGCAAGAGCCTGATGAATTGGAAGAAGTTGAACAACAAGTGCAAGAAGTGCCTCCTGTGAGACAAACACAAAGCGGGACTGGTGACGTTAGTCCAATGATGATGATGTCGGCATTTGGAACAGGATATTATGATTCAGGAGTCGGTCAATCGTCAGACTTCGGGACAGGATATTATAATTCAGAGGCAGGTCCATCGTCGTCAAACTTTGGACAAGGATACTACGATTTAGGGACCGATCCATCGTCTTCATACATGCATGGACATGGACGTGGTCGTGGAGAACATAACGAATATTTGTATTACGAACCACCTGCAGCGGTACCCGAGCAGCCAGATGAGCAACAACAAGAGAATCAGGAGGGACTAGAGCAACAAAGAGTGCATGGTCGACGAGGCAACCAGCAAGAAATCGACGACGTCCAGGTTGTGGAACACATTGATTTTTTTTTTTAA
Coding sequence (CDS)
ATGTACGATGTACCTATTGTACCTGCACCAGTTCAAAGGAGGCGTGCTCGAGTGCAAGAGCCTGATGAATTGGAAGAAGTTGAACAACAAGTGCAAGAAGTGCCTCCTGTGAGACAAACACAAAGCGGGACTGGTGACGTTAGTCCAATGATGATGATGTCGGCATTTGGAACAGGATATTATGATTCAGGAGTCGGTCAATCGTCAGACTTCGGGACAGGATATTATAATTCAGAGGCAGGTCCATCGTCGTCAAACTTTGGACAAGGATACTACGATTTAGGGACCGATCCATCGTCTTCATACATGCATGGACATGGACGTGGTCGTGGAGAACATAACGAATATTTGTATTACGAACCACCTGCAGCGGTACCCGAGCAGCCAGATGAGCAACAACAAGAGAATCAGGAGGGACTAGAGCAACAAAGAGTGCATGGTCGACGAGGCAACCAGCAAGAAATCGACGACGTCCAGGTTGTGGAACACATTGATTTTTTTTTTTAA
Protein sequence
MYDVPIVPAPVQRRRARVQEPDELEEVEQQVQEVPPVRQTQSGTGDVSPMMMMSAFGTGYYDSGVGQSSDFGTGYYNSEAGPSSSNFGQGYYDLGTDPSSSYMHGHGRGRGEHNEYLYYEPPAAVPEQPDEQQQENQEGLEQQRVHGRRGNQQEIDDVQVVEHIDFFF
Homology
BLAST of PI0001903 vs. ExPASy TrEMBL
Match:
A0A5A7U731 (Serine/threonine-protein phosphatase 7 long form-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1161G00130 PE=4 SV=1)
HSP 1 Score: 222.2 bits (565), Expect = 1.6e-54
Identity = 121/151 (80.13%), Postives = 131/151 (86.75%), Query Frame = 0
Query: 1 MYDVPIVPAPVQRRRARVQEPDELEEVEQQVQEVPPVRQTQSGTGDVSPMMMMSAFGTGY 60
MYDVPIVPAP+QRRRA VQE DELEEV+Q ++EVPPV QT+S T VSPM+MMSAFGTGY
Sbjct: 277 MYDVPIVPAPIQRRRALVQELDELEEVDQHMEEVPPVTQTKSETSYVSPMIMMSAFGTGY 336
Query: 61 YDSGVGQSSDFGTGYYNSEAGPSSSNFGQGYYDLGTDPSSSYMHGHGRGRGEHNEYLYYE 120
YD GV QSSDFGTGYYN GPSSSNFGQ YYDLGT+PSSSYMHGHGRGRGEHNEYLYY
Sbjct: 337 YDPGVSQSSDFGTGYYNL-TGPSSSNFGQEYYDLGTNPSSSYMHGHGRGRGEHNEYLYYV 396
Query: 121 PPAAVPEQPDE-QQQENQEGLEQQRVHGRRG 151
PAAV E+P+E QQQENQE L+QQRV RRG
Sbjct: 397 APAAVSEEPNEQQQQENQEELQQQRVQSRRG 426
BLAST of PI0001903 vs. ExPASy TrEMBL
Match:
A0A5A7UKC7 (Serine/threonine-protein phosphatase 7 long form-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold222G001140 PE=4 SV=1)
HSP 1 Score: 214.5 bits (545), Expect = 3.3e-52
Identity = 118/165 (71.52%), Postives = 129/165 (78.18%), Query Frame = 0
Query: 1 MYDVPIVPAPVQRRRARVQEPDELEEVEQQVQEVPPVRQTQSGTGDVSPMMMMSAFGTGY 60
MYDVPIVPAPVQRRR VQEPD+LEEV+Q +EVPP+ QT+S VSP+MMM FGT Y
Sbjct: 605 MYDVPIVPAPVQRRRPLVQEPDQLEEVDQHGEEVPPMTQTKSEHNYVSPVMMMPTFGTTY 664
Query: 61 YDSGVGQSSDFGTGYYNSEAGPSSSNFGQGYYDLGTDPSSSYMHGHGRGRGEHNEYLYYE 120
YDSGVGQSSDFG GYYNSEAG SS++FGQ YYDLG+DPSSSYMHGHGRGRGEHNEYLYYE
Sbjct: 665 YDSGVGQSSDFGRGYYNSEAGQSSTDFGQQYYDLGSDPSSSYMHGHGRGRGEHNEYLYYE 724
Query: 121 PPAAVPEQPDE----------------QQQENQEGLEQQRVHGRR 150
PAAVPEQ DE QQQENQE ++QQRV RR
Sbjct: 725 VPAAVPEQSDELQQQENAAVPGQSDGQQQQENQEEIQQQRVQSRR 769
BLAST of PI0001903 vs. ExPASy TrEMBL
Match:
A0A5A7SU33 (Serine/threonine-protein phosphatase 7 long form-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold400G00810 PE=4 SV=1)
HSP 1 Score: 214.2 bits (544), Expect = 4.3e-52
Identity = 118/165 (71.52%), Postives = 129/165 (78.18%), Query Frame = 0
Query: 1 MYDVPIVPAPVQRRRARVQEPDELEEVEQQVQEVPPVRQTQSGTGDVSPMMMMSAFGTGY 60
MYDVPIVPAPVQRRR VQEPD+LEEV+Q +EVPP+ QTQS VSP+MMM FGT Y
Sbjct: 597 MYDVPIVPAPVQRRRPLVQEPDQLEEVDQHGEEVPPMTQTQSEHNYVSPVMMMPTFGTTY 656
Query: 61 YDSGVGQSSDFGTGYYNSEAGPSSSNFGQGYYDLGTDPSSSYMHGHGRGRGEHNEYLYYE 120
YDSGVGQSSDFG GYYNSEAG SS++FGQ YYDLG+DPSSSYMHGHGRGRGEHNEYLYYE
Sbjct: 657 YDSGVGQSSDFGRGYYNSEAGQSSTDFGQQYYDLGSDPSSSYMHGHGRGRGEHNEYLYYE 716
Query: 121 PPAAVPEQPDE----------------QQQENQEGLEQQRVHGRR 150
PAAVPEQ +E QQQENQE ++QQRV RR
Sbjct: 717 VPAAVPEQSNELQQQENAAVPGQSDEQQQQENQEEIQQQRVQSRR 761
BLAST of PI0001903 vs. ExPASy TrEMBL
Match:
A0A5A7VIP6 (Mediator of RNA polymerase II transcription subunit 12-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold38G001330 PE=4 SV=1)
HSP 1 Score: 211.1 bits (536), Expect = 3.6e-51
Identity = 117/165 (70.91%), Postives = 128/165 (77.58%), Query Frame = 0
Query: 1 MYDVPIVPAPVQRRRARVQEPDELEEVEQQVQEVPPVRQTQSGTGDVSPMMMMSAFGTGY 60
MYDVPIVPAPVQRRR VQEPD+LEEV+Q +EVPP+ QTQS VSP+MMM FGT Y
Sbjct: 448 MYDVPIVPAPVQRRRPLVQEPDQLEEVDQHGEEVPPMTQTQSEHNYVSPVMMMPTFGTTY 507
Query: 61 YDSGVGQSSDFGTGYYNSEAGPSSSNFGQGYYDLGTDPSSSYMHGHGRGRGEHNEYLYYE 120
YDS VGQSSDFG GYYNSEAG SS++FGQ YYDLG+DPSSSYMHGHGRGRGEHNEYLYYE
Sbjct: 508 YDSEVGQSSDFGRGYYNSEAGQSSTDFGQQYYDLGSDPSSSYMHGHGRGRGEHNEYLYYE 567
Query: 121 PPAAVPEQPDE----------------QQQENQEGLEQQRVHGRR 150
PAAVPEQ +E QQQENQE ++QQRV RR
Sbjct: 568 VPAAVPEQSNELQQQENAAVPGQSDEQQQQENQEEIQQQRVQSRR 612
BLAST of PI0001903 vs. ExPASy TrEMBL
Match:
A0A5D3BAB0 (Serine/threonine-protein phosphatase 7 long form-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold110G001240 PE=4 SV=1)
HSP 1 Score: 210.7 bits (535), Expect = 4.8e-51
Identity = 116/165 (70.30%), Postives = 128/165 (77.58%), Query Frame = 0
Query: 1 MYDVPIVPAPVQRRRARVQEPDELEEVEQQVQEVPPVRQTQSGTGDVSPMMMMSAFGTGY 60
MYDVPIVPAPVQRRR VQEPD+LEEV+Q +EVPP+ QTQS VSP+MMM FGT Y
Sbjct: 1096 MYDVPIVPAPVQRRRPLVQEPDQLEEVDQHGKEVPPMTQTQSEHNYVSPVMMMPTFGTTY 1155
Query: 61 YDSGVGQSSDFGTGYYNSEAGPSSSNFGQGYYDLGTDPSSSYMHGHGRGRGEHNEYLYYE 120
YDSGVGQSSDFG GYYNS+AG SS++FGQ YYDLG+DPSSSYMHGHGRGRG+HNEYLYYE
Sbjct: 1156 YDSGVGQSSDFGRGYYNSKAGQSSTDFGQQYYDLGSDPSSSYMHGHGRGRGKHNEYLYYE 1215
Query: 121 PPAAVPEQPDE----------------QQQENQEGLEQQRVHGRR 150
PAAVPEQ DE QQQEN E ++QQRV RR
Sbjct: 1216 VPAAVPEQSDELQQQENAAVPGQSDEQQQQENHEEIQQQRVQSRR 1260
BLAST of PI0001903 vs. NCBI nr
Match:
KAA0051098.1 (serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var. makuwa] >TYK02687.1 serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var. makuwa])
HSP 1 Score: 222.2 bits (565), Expect = 3.3e-54
Identity = 121/151 (80.13%), Postives = 131/151 (86.75%), Query Frame = 0
Query: 1 MYDVPIVPAPVQRRRARVQEPDELEEVEQQVQEVPPVRQTQSGTGDVSPMMMMSAFGTGY 60
MYDVPIVPAP+QRRRA VQE DELEEV+Q ++EVPPV QT+S T VSPM+MMSAFGTGY
Sbjct: 277 MYDVPIVPAPIQRRRALVQELDELEEVDQHMEEVPPVTQTKSETSYVSPMIMMSAFGTGY 336
Query: 61 YDSGVGQSSDFGTGYYNSEAGPSSSNFGQGYYDLGTDPSSSYMHGHGRGRGEHNEYLYYE 120
YD GV QSSDFGTGYYN GPSSSNFGQ YYDLGT+PSSSYMHGHGRGRGEHNEYLYY
Sbjct: 337 YDPGVSQSSDFGTGYYNL-TGPSSSNFGQEYYDLGTNPSSSYMHGHGRGRGEHNEYLYYV 396
Query: 121 PPAAVPEQPDE-QQQENQEGLEQQRVHGRRG 151
PAAV E+P+E QQQENQE L+QQRV RRG
Sbjct: 397 APAAVSEEPNEQQQQENQEELQQQRVQSRRG 426
BLAST of PI0001903 vs. NCBI nr
Match:
KAA0055624.1 (serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var. makuwa])
HSP 1 Score: 214.5 bits (545), Expect = 6.8e-52
Identity = 118/165 (71.52%), Postives = 129/165 (78.18%), Query Frame = 0
Query: 1 MYDVPIVPAPVQRRRARVQEPDELEEVEQQVQEVPPVRQTQSGTGDVSPMMMMSAFGTGY 60
MYDVPIVPAPVQRRR VQEPD+LEEV+Q +EVPP+ QT+S VSP+MMM FGT Y
Sbjct: 605 MYDVPIVPAPVQRRRPLVQEPDQLEEVDQHGEEVPPMTQTKSEHNYVSPVMMMPTFGTTY 664
Query: 61 YDSGVGQSSDFGTGYYNSEAGPSSSNFGQGYYDLGTDPSSSYMHGHGRGRGEHNEYLYYE 120
YDSGVGQSSDFG GYYNSEAG SS++FGQ YYDLG+DPSSSYMHGHGRGRGEHNEYLYYE
Sbjct: 665 YDSGVGQSSDFGRGYYNSEAGQSSTDFGQQYYDLGSDPSSSYMHGHGRGRGEHNEYLYYE 724
Query: 121 PPAAVPEQPDE----------------QQQENQEGLEQQRVHGRR 150
PAAVPEQ DE QQQENQE ++QQRV RR
Sbjct: 725 VPAAVPEQSDELQQQENAAVPGQSDGQQQQENQEEIQQQRVQSRR 769
BLAST of PI0001903 vs. NCBI nr
Match:
KAA0034013.1 (serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var. makuwa])
HSP 1 Score: 214.2 bits (544), Expect = 8.9e-52
Identity = 118/165 (71.52%), Postives = 129/165 (78.18%), Query Frame = 0
Query: 1 MYDVPIVPAPVQRRRARVQEPDELEEVEQQVQEVPPVRQTQSGTGDVSPMMMMSAFGTGY 60
MYDVPIVPAPVQRRR VQEPD+LEEV+Q +EVPP+ QTQS VSP+MMM FGT Y
Sbjct: 597 MYDVPIVPAPVQRRRPLVQEPDQLEEVDQHGEEVPPMTQTQSEHNYVSPVMMMPTFGTTY 656
Query: 61 YDSGVGQSSDFGTGYYNSEAGPSSSNFGQGYYDLGTDPSSSYMHGHGRGRGEHNEYLYYE 120
YDSGVGQSSDFG GYYNSEAG SS++FGQ YYDLG+DPSSSYMHGHGRGRGEHNEYLYYE
Sbjct: 657 YDSGVGQSSDFGRGYYNSEAGQSSTDFGQQYYDLGSDPSSSYMHGHGRGRGEHNEYLYYE 716
Query: 121 PPAAVPEQPDE----------------QQQENQEGLEQQRVHGRR 150
PAAVPEQ +E QQQENQE ++QQRV RR
Sbjct: 717 VPAAVPEQSNELQQQENAAVPGQSDEQQQQENQEEIQQQRVQSRR 761
BLAST of PI0001903 vs. NCBI nr
Match:
KAA0067080.1 (mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa])
HSP 1 Score: 211.1 bits (536), Expect = 7.5e-51
Identity = 117/165 (70.91%), Postives = 128/165 (77.58%), Query Frame = 0
Query: 1 MYDVPIVPAPVQRRRARVQEPDELEEVEQQVQEVPPVRQTQSGTGDVSPMMMMSAFGTGY 60
MYDVPIVPAPVQRRR VQEPD+LEEV+Q +EVPP+ QTQS VSP+MMM FGT Y
Sbjct: 448 MYDVPIVPAPVQRRRPLVQEPDQLEEVDQHGEEVPPMTQTQSEHNYVSPVMMMPTFGTTY 507
Query: 61 YDSGVGQSSDFGTGYYNSEAGPSSSNFGQGYYDLGTDPSSSYMHGHGRGRGEHNEYLYYE 120
YDS VGQSSDFG GYYNSEAG SS++FGQ YYDLG+DPSSSYMHGHGRGRGEHNEYLYYE
Sbjct: 508 YDSEVGQSSDFGRGYYNSEAGQSSTDFGQQYYDLGSDPSSSYMHGHGRGRGEHNEYLYYE 567
Query: 121 PPAAVPEQPDE----------------QQQENQEGLEQQRVHGRR 150
PAAVPEQ +E QQQENQE ++QQRV RR
Sbjct: 568 VPAAVPEQSNELQQQENAAVPGQSDEQQQQENQEEIQQQRVQSRR 612
BLAST of PI0001903 vs. NCBI nr
Match:
KAA0036767.1 (serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var. makuwa])
HSP 1 Score: 210.7 bits (535), Expect = 9.8e-51
Identity = 116/165 (70.30%), Postives = 128/165 (77.58%), Query Frame = 0
Query: 1 MYDVPIVPAPVQRRRARVQEPDELEEVEQQVQEVPPVRQTQSGTGDVSPMMMMSAFGTGY 60
MYDVPIVPAPVQRRR VQEPD+LEEV+Q +EVPP+ QTQS VSP+MMM FGT Y
Sbjct: 335 MYDVPIVPAPVQRRRPLVQEPDQLEEVDQHGKEVPPMTQTQSEHNYVSPVMMMPTFGTTY 394
Query: 61 YDSGVGQSSDFGTGYYNSEAGPSSSNFGQGYYDLGTDPSSSYMHGHGRGRGEHNEYLYYE 120
YDSGVGQSSDFG GYYNS+AG SS++FGQ YYDLG+DPSSSYMHGHGRGRG+HNEYLYYE
Sbjct: 395 YDSGVGQSSDFGRGYYNSKAGQSSTDFGQQYYDLGSDPSSSYMHGHGRGRGKHNEYLYYE 454
Query: 121 PPAAVPEQPDE----------------QQQENQEGLEQQRVHGRR 150
PAAVPEQ DE QQQEN E ++QQRV RR
Sbjct: 455 VPAAVPEQSDELQQQENAAVPGQSDEQQQQENHEEIQQQRVQSRR 499
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| A0A5A7U731 | 1.6e-54 | 80.13 | Serine/threonine-protein phosphatase 7 long form-like protein OS=Cucumis melo va... | [more] |
| A0A5A7UKC7 | 3.3e-52 | 71.52 | Serine/threonine-protein phosphatase 7 long form-like protein OS=Cucumis melo va... | [more] |
| A0A5A7SU33 | 4.3e-52 | 71.52 | Serine/threonine-protein phosphatase 7 long form-like protein OS=Cucumis melo va... | [more] |
| A0A5A7VIP6 | 3.6e-51 | 70.91 | Mediator of RNA polymerase II transcription subunit 12-like isoform X1 OS=Cucumi... | [more] |
| A0A5D3BAB0 | 4.8e-51 | 70.30 | Serine/threonine-protein phosphatase 7 long form-like protein OS=Cucumis melo va... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| KAA0051098.1 | 3.3e-54 | 80.13 | serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var.... | [more] |
| KAA0055624.1 | 6.8e-52 | 71.52 | serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var.... | [more] |
| KAA0034013.1 | 8.9e-52 | 71.52 | serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var.... | [more] |
| KAA0067080.1 | 7.5e-51 | 70.91 | mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis ... | [more] |
| KAA0036767.1 | 9.8e-51 | 70.30 | serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var.... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
