PI0001790 (gene) Melon (PI 482460) v1

Overview
NamePI0001790
Typegene
OrganismCucumis metuliferus (Melon (PI 482460) v1)
DescriptionUnknown protein
Locationchr12: 15902525 .. 15903022 (-)
RNA-Seq ExpressionPI0001790
SyntenyPI0001790
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTAGATCATCTCAAACCCACAAGCTATATATGTTCATGAGATATTCATTTCTTAACCATTCATTAACAAATGGGAAACTGCATTGTCTTGCCTTCTGTTCGGTCCCCGCAGAAAAAGCTTAGAGGGCTTAAAAAAGCCACGGATTTAGCTACAACTATTGTCTATTCTGCTACCGAATGTGGTAACGACCCTCTTCTCAAGGACTTTATCTCTTCAACCAAAACTAGCCTCCAAGTTGGGGCGGTTCGAAATGTTGTTCCGTGCTTGAAAGAGCTCGAGAATCTTCTAGCTTCCTCGAAGATAGTCTACTCGGATGCAGCGGGAGCAAAGAAGGTGAAGATTGTGGTAACTAAGGAACAGTTTAAGTTGCTGTTGGCAAATGCAAAGAAGTTGCAATCTCGACATAGATTGTTGAGTTACACAGGCCCCCGTAAAGGGTGTAAAAGATGGCGGCCGACGTTGTCCGCAATTTCGGAGGAAAAAGATTTTGAATAA

mRNA sequence

ATGAAAAAGCTTAGAGGGCTTAAAAAAGCCACGGATTTAGCTACAACTATTGTCTATTCTGCTACCGAATGTGGTAACGACCCTCTTCTCAAGGACTTTATCTCTTCAACCAAAACTAGCCTCCAAGTTGGGGCGGTTCGAAATGTTGTTCCGTGCTTGAAAGAGCTCGAGAATCTTCTAGCTTCCTCGAAGATAGTCTACTCGGATGCAGCGGGAGCAAAGAAGGTGAAGATTGTGGTAACTAAGGAACAGTTTAAGTTGCTGTTGGCAAATGCAAAGAAGTTGCAATCTCGACATAGATTGTTGAGTTACACAGGCCCCCGTAAAGGGTGTAAAAGATGGCGGCCGACGTTGTCCGCAATTTCGGAGGAAAAAGATTTTGAATAA

Coding sequence (CDS)

ATGAAAAAGCTTAGAGGGCTTAAAAAAGCCACGGATTTAGCTACAACTATTGTCTATTCTGCTACCGAATGTGGTAACGACCCTCTTCTCAAGGACTTTATCTCTTCAACCAAAACTAGCCTCCAAGTTGGGGCGGTTCGAAATGTTGTTCCGTGCTTGAAAGAGCTCGAGAATCTTCTAGCTTCCTCGAAGATAGTCTACTCGGATGCAGCGGGAGCAAAGAAGGTGAAGATTGTGGTAACTAAGGAACAGTTTAAGTTGCTGTTGGCAAATGCAAAGAAGTTGCAATCTCGACATAGATTGTTGAGTTACACAGGCCCCCGTAAAGGGTGTAAAAGATGGCGGCCGACGTTGTCCGCAATTTCGGAGGAAAAAGATTTTGAATAA

Protein sequence

MKKLRGLKKATDLATTIVYSATECGNDPLLKDFISSTKTSLQVGAVRNVVPCLKELENLLASSKIVYSDAAGAKKVKIVVTKEQFKLLLANAKKLQSRHRLLSYTGPRKGCKRWRPTLSAISEEKDFE
Homology
BLAST of PI0001790 vs. ExPASy TrEMBL
Match: A0A0A0LSY9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G173150 PE=4 SV=1)

HSP 1 Score: 220.3 bits (560), Expect = 4.6e-54
Identity = 115/126 (91.27%), Postives = 118/126 (93.65%), Query Frame = 0

Query: 2   KKLRGLKKATDLATTIVYSATECGNDPLLKDFISSTKTSLQVGAVRNVVPCLKELENLLA 61
           KKLRGLKKAT+LATTIV SATECGNDPLLKDF SSTKTSLQV  VRNVVPCLKELENLLA
Sbjct: 15  KKLRGLKKATELATTIVCSATECGNDPLLKDFKSSTKTSLQVCEVRNVVPCLKELENLLA 74

Query: 62  SSKIVYSDAAGAKKVKIVVTKEQFKLLLANAKKLQSRHRLLSYTGPRKGCKRWRPTLSAI 121
           S KIVYSD AGAKKVKIVVTKEQFKLLL+NAKKLQ RHRLLSYTGPRKGCK WRPTLSAI
Sbjct: 75  SLKIVYSDEAGAKKVKIVVTKEQFKLLLSNAKKLQYRHRLLSYTGPRKGCKNWRPTLSAI 134

Query: 122 SEEKDF 128
           SEE+DF
Sbjct: 135 SEEEDF 140

BLAST of PI0001790 vs. ExPASy TrEMBL
Match: A0A5D3CW41 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold477G00390 PE=4 SV=1)

HSP 1 Score: 178.3 bits (451), Expect = 2.0e-41
Identity = 95/107 (88.79%), Postives = 99/107 (92.52%), Query Frame = 0

Query: 2   KKLRGLKKATDLATTIVYSATECGNDPLLKDFISSTKTSLQVGAVRNVVPCLKELENLLA 61
           KKL+GLKKAT LAT IVYSA+ECGNDPLLK   SSTKTSLQVG VRNVVPCLKELENLLA
Sbjct: 15  KKLQGLKKATGLATPIVYSASECGNDPLLKYCNSSTKTSLQVGEVRNVVPCLKELENLLA 74

Query: 62  SSKIVYSDAAGAKKVKIVVTKEQFKLLLANAKKLQSRHRLLSYTGPR 109
           SSKIVYSD  GAKKVKIVVT+EQFKLLLANAKKLQSR+RLLSYTGPR
Sbjct: 75  SSKIVYSDGGGAKKVKIVVTREQFKLLLANAKKLQSRYRLLSYTGPR 121

BLAST of PI0001790 vs. ExPASy TrEMBL
Match: A0A6J5UND5 (Uncharacterized protein OS=Prunus armeniaca OX=36596 GN=CURHAP_LOCUS24534 PE=4 SV=1)

HSP 1 Score: 61.2 bits (147), Expect = 3.6e-06
Identity = 37/92 (40.22%), Postives = 54/92 (58.70%), Query Frame = 0

Query: 39  TSLQVGAVRNVVPCLKELENLLASSKIVYSDAAGAKKVKIVVTKEQFKLLLANAKKLQSR 98
           T L+ G V ++VP L  L   L  SKIV+ ++   +K+KIVVT+EQ +LLL +A K +S 
Sbjct: 73  TKLEPGEVYHIVPNLASLGKPLVPSKIVHQESCKRQKIKIVVTREQLELLLKSANKFRSP 132

Query: 99  HRL---LSYTGPRKGCKRWRPTLSAISEEKDF 128
             +   LS     +G  +WRP+L+ I E   F
Sbjct: 133 KEIGVQLSGRSGLEGSPKWRPSLAIIPEVHSF 164

BLAST of PI0001790 vs. ExPASy TrEMBL
Match: A0A5E4GL56 (PREDICTED: POPTR_0006s01910g OS=Prunus dulcis OX=3755 GN=ALMOND_2B008489 PE=4 SV=1)

HSP 1 Score: 60.5 bits (145), Expect = 6.1e-06
Identity = 37/92 (40.22%), Postives = 54/92 (58.70%), Query Frame = 0

Query: 39  TSLQVGAVRNVVPCLKELENLLASSKIVYSDAAGAKKVKIVVTKEQFKLLLANAKKLQSR 98
           T L+ G V ++VP L  L   L  SKIV+ ++   +K+KIVVT+EQ +LLL +A K +S 
Sbjct: 61  TKLEQGEVYHLVPNLASLGKPLVPSKIVHQESCKRQKIKIVVTREQLELLLKSANKFRSP 120

Query: 99  HRL---LSYTGPRKGCKRWRPTLSAISEEKDF 128
             +   LS     +G  +WRP+L+ I E   F
Sbjct: 121 KEIGVQLSGRSGLEGSPKWRPSLAIIPEVHSF 152

BLAST of PI0001790 vs. ExPASy TrEMBL
Match: A0A251PDS0 (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_4G005300 PE=4 SV=1)

HSP 1 Score: 60.5 bits (145), Expect = 6.1e-06
Identity = 37/92 (40.22%), Postives = 54/92 (58.70%), Query Frame = 0

Query: 39  TSLQVGAVRNVVPCLKELENLLASSKIVYSDAAGAKKVKIVVTKEQFKLLLANAKKLQSR 98
           T L+ G V ++VP L  L   L  SKIV+ ++   +K+KIVVT+EQ +LLL +A K +S 
Sbjct: 61  TKLEQGEVYHLVPNLASLGKPLVPSKIVHQESCKRQKIKIVVTREQLELLLKSANKFRSP 120

Query: 99  HRL---LSYTGPRKGCKRWRPTLSAISEEKDF 128
             +   LS     +G  +WRP+L+ I E   F
Sbjct: 121 KEIGVQLSGRSGLEGSPKWRPSLAIIPEVHSF 152

BLAST of PI0001790 vs. NCBI nr
Match: KGN64995.1 (hypothetical protein Csa_022837 [Cucumis sativus])

HSP 1 Score: 220.3 bits (560), Expect = 9.5e-54
Identity = 115/126 (91.27%), Postives = 118/126 (93.65%), Query Frame = 0

Query: 2   KKLRGLKKATDLATTIVYSATECGNDPLLKDFISSTKTSLQVGAVRNVVPCLKELENLLA 61
           KKLRGLKKAT+LATTIV SATECGNDPLLKDF SSTKTSLQV  VRNVVPCLKELENLLA
Sbjct: 15  KKLRGLKKATELATTIVCSATECGNDPLLKDFKSSTKTSLQVCEVRNVVPCLKELENLLA 74

Query: 62  SSKIVYSDAAGAKKVKIVVTKEQFKLLLANAKKLQSRHRLLSYTGPRKGCKRWRPTLSAI 121
           S KIVYSD AGAKKVKIVVTKEQFKLLL+NAKKLQ RHRLLSYTGPRKGCK WRPTLSAI
Sbjct: 75  SLKIVYSDEAGAKKVKIVVTKEQFKLLLSNAKKLQYRHRLLSYTGPRKGCKNWRPTLSAI 134

Query: 122 SEEKDF 128
           SEE+DF
Sbjct: 135 SEEEDF 140

BLAST of PI0001790 vs. NCBI nr
Match: XP_038877793.1 (uncharacterized protein LOC120070018 isoform X1 [Benincasa hispida])

HSP 1 Score: 196.1 bits (497), Expect = 1.9e-46
Identity = 102/126 (80.95%), Postives = 110/126 (87.30%), Query Frame = 0

Query: 2   KKLRGLKKATDLATTIVYSATECGNDPLLKDFISSTKTSLQVGAVRNVVPCLKELENLLA 61
           KKLR L+KATD       SATECG DPLL DF S T+T LQVG V+N+VPCLKELENLLA
Sbjct: 19  KKLRELEKATD-------SATECGKDPLLLDFTSPTRTILQVGEVQNIVPCLKELENLLA 78

Query: 62  SSKIVYSDAAGAKKVKIVVTKEQFKLLLANAKKLQSRHRLLSYTGPRKGCKRWRPTLSAI 121
           SSKI YSD AGA+KVKIVVTKEQFKLLLANAKKLQSRHRLLSYTGPRKGC++WRPTLSAI
Sbjct: 79  SSKIAYSDGAGARKVKIVVTKEQFKLLLANAKKLQSRHRLLSYTGPRKGCRKWRPTLSAI 137

Query: 122 SEEKDF 128
           SEE+DF
Sbjct: 139 SEEEDF 137

BLAST of PI0001790 vs. NCBI nr
Match: KAA0042344.1 (hypothetical protein E6C27_scaffold795G00420 [Cucumis melo var. makuwa] >TYK15468.1 hypothetical protein E5676_scaffold477G00390 [Cucumis melo var. makuwa])

HSP 1 Score: 178.3 bits (451), Expect = 4.1e-41
Identity = 95/107 (88.79%), Postives = 99/107 (92.52%), Query Frame = 0

Query: 2   KKLRGLKKATDLATTIVYSATECGNDPLLKDFISSTKTSLQVGAVRNVVPCLKELENLLA 61
           KKL+GLKKAT LAT IVYSA+ECGNDPLLK   SSTKTSLQVG VRNVVPCLKELENLLA
Sbjct: 15  KKLQGLKKATGLATPIVYSASECGNDPLLKYCNSSTKTSLQVGEVRNVVPCLKELENLLA 74

Query: 62  SSKIVYSDAAGAKKVKIVVTKEQFKLLLANAKKLQSRHRLLSYTGPR 109
           SSKIVYSD  GAKKVKIVVT+EQFKLLLANAKKLQSR+RLLSYTGPR
Sbjct: 75  SSKIVYSDGGGAKKVKIVVTREQFKLLLANAKKLQSRYRLLSYTGPR 121

BLAST of PI0001790 vs. NCBI nr
Match: KAG6583721.1 (hypothetical protein SDJN03_19653, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 152.1 bits (383), Expect = 3.2e-33
Identity = 84/99 (84.85%), Postives = 89/99 (89.90%), Query Frame = 0

Query: 2   KKLRGLKKATDLATTIVYSATECGNDPLLKDFISSTKTSLQVGAVRNVVPCLKELENLLA 61
           KKLRG++KATDLATT V SATEC ND LL DF SST+TSLQVG VR+VVPCLKELE LL 
Sbjct: 15  KKLRGIEKATDLATT-VDSATECCNDHLLHDFSSSTRTSLQVGEVRDVVPCLKELEKLLV 74

Query: 62  SSKIVYSDAAGAKKVKIVVTKEQFKLLLANAKKLQSRHR 101
           SSKIVYSD AGA+KVKIVVTKEQFKLLLANAKKLQSRHR
Sbjct: 75  SSKIVYSDGAGARKVKIVVTKEQFKLLLANAKKLQSRHR 112

BLAST of PI0001790 vs. NCBI nr
Match: XP_023542404.1 (uncharacterized protein LOC111802317 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 119.8 bits (299), Expect = 1.7e-23
Identity = 66/111 (59.46%), Postives = 78/111 (70.27%), Query Frame = 0

Query: 16  TIVYSATECGNDPLLKDFISSTKTSLQVGAVRNVVPCLKELENLLASSKIVYSDAAGAKK 75
           T+V SATE GNDPLL                 +VVPCLKELENLL   K  YS   GA++
Sbjct: 158 TVVDSATEQGNDPLL-----------------DVVPCLKELENLLVYLKTAYSSGGGARE 217

Query: 76  VKIVVTKEQFKLLLANAKKLQSRHRLLSYTGPRKGCKRWRPTLSAISEEKD 127
           VKIVVT+EQFKLLLANAKK+QS +RLLSY GP +G ++WRP LS ISEE++
Sbjct: 218 VKIVVTREQFKLLLANAKKMQSAYRLLSYRGPGRGRRKWRPMLSVISEEEE 251

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A0LSY94.6e-5491.27Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G173150 PE=4 SV=1[more]
A0A5D3CW412.0e-4188.79Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A6J5UND53.6e-0640.22Uncharacterized protein OS=Prunus armeniaca OX=36596 GN=CURHAP_LOCUS24534 PE=4 S... [more]
A0A5E4GL566.1e-0640.22PREDICTED: POPTR_0006s01910g OS=Prunus dulcis OX=3755 GN=ALMOND_2B008489 PE=4 SV... [more]
A0A251PDS06.1e-0640.22Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_4G005300 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
KGN64995.19.5e-5491.27hypothetical protein Csa_022837 [Cucumis sativus][more]
XP_038877793.11.9e-4680.95uncharacterized protein LOC120070018 isoform X1 [Benincasa hispida][more]
KAA0042344.14.1e-4188.79hypothetical protein E6C27_scaffold795G00420 [Cucumis melo var. makuwa] >TYK1546... [more]
KAG6583721.13.2e-3384.85hypothetical protein SDJN03_19653, partial [Cucurbita argyrosperma subsp. sorori... [more]
XP_023542404.11.7e-2359.46uncharacterized protein LOC111802317 [Cucurbita pepo subsp. pepo][more]
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
PI0001790.1PI0001790.1mRNA