PI0001777 (gene) Melon (PI 482460) v1

Overview


Name	PI0001777
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	histone H1
Location	chr05: 19742971 .. 19746392 (-)
RNA-Seq Expression	PI0001777
Synteny	PI0001777

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATCAAATAGTTTCTCTTTCTTGTCTTAAGATCTCAAATTTTCATTCCGATAATCTTCTTCTTCTTTCCTAATCCAATTCTATTCTTCTGTTCTTTTAACCCTAATTCTACTTTCGTATTGTTGGATTTGATCTTGTTTCTACTCCAATGGCTACTGAGGAACCGGTGGTACCGGTGGAGTCTGCGGCAGAGCCGACTGACGCCGAACAAGCGGAAGAAAATCCAACGAACAAAGCTGCGAAGTCTAAGAAGTCGAAAGAACCTAAAGAGAAGAAACCTGCTGCTCCTAGGAAACCTAGAAATCCCCCAACTCATCCTCCATATGAAGAGGTGTGTTACTGATTCGAATTCGAATTTTCTTTTGAATTTAATGTTTGGTGTATTAGATCTGTTTTGTTGATTCGGTTTGGTGTTTTGATTCAGATGATTAAGGATGCGATTGTTACGTTGAAGGAAAGGACTGGTTCGAGTCAGTATGCGATCACTAAATTTATTGAAGAGAAGCAAAAGCAACTTCCATCGAACTTTAAGAAGCTTTTGTTATTCCATTTGAAGAAACTTGTGGCTTCCGGGAAGTTGGTGAAGGTTAAGAGTTCGTTCAAGCTTAAACCGGCGAAGCCGGCAGTAGTGAAACCTGCTTCTCCTGCGAAGAAGAAGCCTGTAGCTGCTAAGCCGAAGTCTAAAGCCGTAGCTAAGCCCAAAGCTGTGGCAAAATCTCCTGCGAAGCCGAAAGCTGCTGCAAAGCCGAAGCCTAAGACGACTGCCAAACCCAAAGCTGCTCCTAAACCTAAACCAGCTCCAGCCAAGTCAAAGAGCAGTGCTGTGGCGAAGCCCAAGGCTGCGGCGAAGACTAAAGCCGCTCCCAAGCCGAAAGCCAAGGAAAAGCCTGCGAAGGCTGCAAGAACTTCGACGAGAACCTCACCAGGAAGGAAGGCACCAGCTCCAAAACCGGTAGTGAAGAAGGCACCGGCGGCCAAGAAGGCTCCGTCGAAAAGTGTTAAAGCTAAGAAAGTGAAATCGCTGGCGAAAAAGGCTCCGGCTAAAAGAGGAAGCAAAGGGAGGTAGATTGTGGCGGCGGTCCTGTAAATCCGTAATCCTTGTGGGTGTATAGACCCTTACATGCCGTGCTATAGAGGAGTGTACTTGAGACTTTTCGAATTTTTTTCTTTTATTTGTTAATTTGTAGAACTTTTTTTTTCTCCCCAAGTTGATGTATCAATCAGCTTAGTTTTTAATGGAAATTTAGTAATCAATTAGGAGCGTTGATTTCAGTTCTCAACCTATGATTTCTATGGGCAAATCGACTCCATCAATTATCAAGGAATCAATTCGTTTCTCTCAAGGCTCGAAATGGACTTGGATTGGATTTAGTAACTGAAGTTTGAAGCCTTGTTGTTAAGCCTGGTAAATCTCAATCCTTGTATTTCTCGCCCCTATTTTCTGTTTGTGTGGTTCCAGTTTTGCCTATTATATGTCTAAAAGATGAGTTCTTAGAGATACTGTCAATTAGCTTGTTATATTTGATGGTTTCTTAGATGGGTTTTGATTAGATGTTAAGTTTTGATCATAACTACTAATTCCTTTAGGCTGTTTGATTTAGAATAGCACCATTCTCACAATGTATGTATGGTGCTATCTACAGATGTTTGCATTGGTTGTTCCTTGTAGTTTGTTAGTTTTATTAGGGTTTGGATAGATTTACTGATTATTTTGATTCCACAAGGGATGAATTTATACGAATTACTGGATTAGGATGTCGTTTGTAACACAAACTTTTGAAGGACAAGAGACGCTACCCTTATGAAAACATCAAGGTTAGGAAGATTGCGAAGGTGTTTGGTTGCTGAAGAACGGGTTGGAATTTGGCTGAGAGATTTGTAAAGAAATTGGAGAAAAAACAAGAGCAATTTTCACAATGATATTGTAAGTTCTTGTATTGCGATGGTAGAGAATGATATTGGAAAACCTCATTGTGATGGTGATGTTGTCTGTTCTTCGACACCGATCATAATTGACCTCATAACTCTGACCCCAAGTGCCACCCATAAGGTGTATCATAACACTTATCCTGCTGCATTTTCAAACTTGGGACTGCACTTCCTTAGAATGTGATCAATCCCCAATTTGTAAAGGTGGGTCTTATGCTATTTGTAAAAGCGATATTGATGAAACTTCTTCCTTTATTGATAGTTAAAGTCCTGTGAGCATGTTTTGCATACTCGATAATTGACTATGTTTGCATACCATGATTCCTTCTCTTCAACTTTCATCAATTGCATTAGGAAATAGGTCCCTGATTTCAATCCTACCATGTTGAAGAGGCGTGTTTTCCAAACGCAACAAATGATCCACAACCTGATTCTTGGTACCTTTGTGGTTTAATATCCCCAAATCAAATACTTGGAGCAATAAAATCCATATGATTAACTGTGACTTGCCATCTTTCTTGGTCATTAGATATCTGATTGTAGAATGATAAGTGTGTATCGTGATTTTGGAGCCAACAACATAACTCCTATATTTCTCAAGCATAAATGTAGCGTTGACCACTTGCGTCGCACATCAATTCATATTTCTCAAGCACATAGGTAGAGGTCAACACGTCTTTTAGTGTTTGGAGCGCTTGATTGCATTTTTCATAAAAAAATGTAGGGTTGATTCAAACTAAGTAGATTACAAAATGACTTAGCAATTTGGGAGAAAATCTTCGGTAGAAGCTTGCATGGCCTAGAAAGCTTTGCAATATTTTGATAATAGAAGGTGATGGCAGCTTGCCCATGACATCAATCTTAGTAAGGTCAACTTCTAACCCCTTCTAGGATATCTTGTTTCCTAACACAATCCCCTCAATCATCATGAAGTGACACTTTTCCAAGTTCAACACCAAATTAGTTTATTCGCATCTTGCTAGAACAACTTCTTAATTGCTCAAACATCCTTCAAAGGAGTCTTCGGAGGCAGAGAAATCATCAATAAAGATCTCAACTGATCTTTCTTGGAAATAATAAAACATTGTCATCGTGTACCTCTGAAATGTCCCTAGTGTATAACATAATTCAAAGGTCATGCGACGAAAGACAAACGTGCTATATGGACAAGTAAACGTAGTTTTCTCTTGATCCTCGATGCTATTGTAATCTGGTTATAACCAGAATAACCATCCAGAAAGCAGAAATAATTGCTCCCAACCAACCTATTGAAAATTTGATCAATGAAGGACAATGGGAAATGGTCCTTCTTGGTGTCTACGTTCAACTTGCAATAATCTATACAAATATGTCACCCAGTAAGTATGAGTTCATCTTCTTCATTCGTGACTATTGTGATTCTGCCTTTCTTCGGAACTCACTGGATCGGGCTGACCCACTCACTATTAGAGATTGGATAATCACCCCACGTCAAGCCACTTAATTACTTCTTTCT

mRNA sequence

ATCAAATAGTTTCTCTTTCTTGTCTTAAGATCTCAAATTTTCATTCCGATAATCTTCTTCTTCTTTCCTAATCCAATTCTATTCTTCTGTTCTTTTAACCCTAATTCTACTTTCGTATTGTTGGATTTGATCTTGTTTCTACTCCAATGGCTACTGAGGAACCGGTGGTACCGGTGGAGTCTGCGGCAGAGCCGACTGACGCCGAACAAGCGGAAGAAAATCCAACGAACAAAGCTGCGAAGTCTAAGAAGTCGAAAGAACCTAAAGAGAAGAAACCTGCTGCTCCTAGGAAACCTAGAAATCCCCCAACTCATCCTCCATATGAAGAGATGATTAAGGATGCGATTGTTACGTTGAAGGAAAGGACTGGTTCGAGTCAGTATGCGATCACTAAATTTATTGAAGAGAAGCAAAAGCAACTTCCATCGAACTTTAAGAAGCTTTTGTTATTCCATTTGAAGAAACTTGTGGCTTCCGGGAAGTTGGTGAAGGTTAAGAGTTCGTTCAAGCTTAAACCGGCGAAGCCGGCAGTAGTGAAACCTGCTTCTCCTGCGAAGAAGAAGCCTGTAGCTGCTAAGCCGAAGTCTAAAGCCGTAGCTAAGCCCAAAGCTGTGGCAAAATCTCCTGCGAAGCCGAAAGCTGCTGCAAAGCCGAAGCCTAAGACGACTGCCAAACCCAAAGCTGCTCCTAAACCTAAACCAGCTCCAGCCAAGTCAAAGAGCAGTGCTGTGGCGAAGCCCAAGGCTGCGGCGAAGACTAAAGCCGCTCCCAAGCCGAAAGCCAAGGAAAAGCCTGCGAAGGCTGCAAGAACTTCGACGAGAACCTCACCAGGAAGGAAGGCACCAGCTCCAAAACCGGTAGTGAAGAAGGCACCGGCGGCCAAGAAGGCTCCGTCGAAAAGTGTTAAAGCTAAGAAAGTGAAATCGCTGGCGAAAAAGGCTCCGGCTAAAAGAGGAAGCAAAGGGAGGTAGATTGTGGCGGCGGTCCTGTAAATCCGTAATCCTTGTGGGTGTATAGACCCTTACATGCCGTGCTATAGAGGAGTGTACTTGAGACTTTTCGAATTTTTTTCTTTTATTTGTTAATTTGTAGAACTTTTTTTTTCTCCCCAAGTTGATGTATCAATCAGCTTAGTTTTTAATGGAAATTTAGTAATCAATTAGGAGCGTTGATTTCAGTTCTCAACCTATGATTTCTATGGGCAAATCGACTCCATCAATTATCAAGGAATCAATTCGTTTCTCTCAAGGCTCGAAATGGACTTGGATTGGATTTAGTAACTGAAGTTTGAAGCCTTGTTGTTAAGCCTGGTAAATCTCAATCCTTGTATTTCTCGCCCCTATTTTCTGTTTGTGTGGTTCCAGTTTTGCCTATTATATGTCTAAAAGATGAGTTCTTAGAGATACTGTCAATTAGCTTGTTATATTTGATGGTTTCTTAGATGGGTTTTGATTAGATGTTAAGTTTTGATCATAACTACTAATTCCTTTAGGCTGTTTGATTTAGAATAGCACCATTCTCACAATGTATGTATGGTGCTATCTACAGATGTTTGCATTGGTTGTTCCTTGTAGTTTGTTAGTTTTATTAGGGTTTGGATAGATTTACTGATTATTTTGATTCCACAAGGGATGAATTTATACGAATTACTGGATTAGGATGTCGTTTGTAACACAAACTTTTGAAGGACAAGAGACGCTACCCTTATGAAAACATCAAGGTTAGGAAGATTGCGAAGGTGTTTGGTTGCTGAAGAACGGGTTGGAATTTGGCTGAGAGATTTGTAAAGAAATTGGAGAAAAAACAAGAGCAATTTTCACAATGATATTGTAAGTTCTTGTATTGCGATGGTAGAGAATGATATTGGAAAACCTCATTGTGATGGTGATGTTGTCTGTTCTTCGACACCGATCATAATTGACCTCATAACTCTGACCCCAAGTGCCACCCATAAGGTGTATCATAACACTTATCCTGCTGCATTTTCAAACTTGGGACTGCACTTCCTTAGAATGTGATCAATCCCCAATTTGTAAAGGTGGGTCTTATGCTATTTGTAAAAGCGATATTGATGAAACTTCTTCCTTTATTGATAGTTAAAGTCCTGTGAGCATGTTTTGCATACTCGATAATTGACTATGTTTGCATACCATGATTCCTTCTCTTCAACTTTCATCAATTGCATTAGGAAATAGGTCCCTGATTTCAATCCTACCATGTTGAAGAGGCGTGTTTTCCAAACGCAACAAATGATCCACAACCTGATTCTTGGTACCTTTGTGGTTTAATATCCCCAAATCAAATACTTGGAGCAATAAAATCCATATGATTAACTGTGACTTGCCATCTTTCTTGGTCATTAGATATCTGATTGTAGAATGATAAGTGTGTATCGTGATTTTGGAGCCAACAACATAACTCCTATATTTCTCAAGCATAAATGTAGCGTTGACCACTTGCGTCGCACATCAATTCATATTTCTCAAGCACATAGGTAGAGGTCAACACGTCTTTTAGTGTTTGGAGCGCTTGATTGCATTTTTCATAAAAAAATGTAGGGTTGATTCAAACTAAGTAGATTACAAAATGACTTAGCAATTTGGGAGAAAATCTTCGGTAGAAGCTTGCATGGCCTAGAAAGCTTTGCAATATTTTGATAATAGAAGGTGATGGCAGCTTGCCCATGACATCAATCTTAGTAAGGTCAACTTCTAACCCCTTCTAGGATATCTTGTTTCCTAACACAATCCCCTCAATCATCATGAAGTGACACTTTTCCAAGTTCAACACCAAATTAGTTTATTCGCATCTTGCTAGAACAACTTCTTAATTGCTCAAACATCCTTCAAAGGAGTCTTCGGAGGCAGAGAAATCATCAATAAAGATCTCAACTGATCTTTCTTGGAAATAATAAAACATTGTCATCGTGTACCTCTGAAATGTCCCTAGTGTATAACATAATTCAAAGGTCATGCGACGAAAGACAAACGTGCTATATGGACAAGTAAACGTAGTTTTCTCTTGATCCTCGATGCTATTGTAATCTGGTTATAACCAGAATAACCATCCAGAAAGCAGAAATAATTGCTCCCAACCAACCTATTGAAAATTTGATCAATGAAGGACAATGGGAAATGGTCCTTCTTGGTGTCTACGTTCAACTTGCAATAATCTATACAAATATGTCACCCAGTAAGTATGAGTTCATCTTCTTCATTCGTGACTATTGTGATTCTGCCTTTCTTCGGAACTCACTGGATCGGGCTGACCCACTCACTATTAGAGATTGGATAATCACCCCACGTCAAGCCACTTAATTACTTCTTTCT

Coding sequence (CDS)

ATGGCTACTGAGGAACCGGTGGTACCGGTGGAGTCTGCGGCAGAGCCGACTGACGCCGAACAAGCGGAAGAAAATCCAACGAACAAAGCTGCGAAGTCTAAGAAGTCGAAAGAACCTAAAGAGAAGAAACCTGCTGCTCCTAGGAAACCTAGAAATCCCCCAACTCATCCTCCATATGAAGAGATGATTAAGGATGCGATTGTTACGTTGAAGGAAAGGACTGGTTCGAGTCAGTATGCGATCACTAAATTTATTGAAGAGAAGCAAAAGCAACTTCCATCGAACTTTAAGAAGCTTTTGTTATTCCATTTGAAGAAACTTGTGGCTTCCGGGAAGTTGGTGAAGGTTAAGAGTTCGTTCAAGCTTAAACCGGCGAAGCCGGCAGTAGTGAAACCTGCTTCTCCTGCGAAGAAGAAGCCTGTAGCTGCTAAGCCGAAGTCTAAAGCCGTAGCTAAGCCCAAAGCTGTGGCAAAATCTCCTGCGAAGCCGAAAGCTGCTGCAAAGCCGAAGCCTAAGACGACTGCCAAACCCAAAGCTGCTCCTAAACCTAAACCAGCTCCAGCCAAGTCAAAGAGCAGTGCTGTGGCGAAGCCCAAGGCTGCGGCGAAGACTAAAGCCGCTCCCAAGCCGAAAGCCAAGGAAAAGCCTGCGAAGGCTGCAAGAACTTCGACGAGAACCTCACCAGGAAGGAAGGCACCAGCTCCAAAACCGGTAGTGAAGAAGGCACCGGCGGCCAAGAAGGCTCCGTCGAAAAGTGTTAAAGCTAAGAAAGTGAAATCGCTGGCGAAAAAGGCTCCGGCTAAAAGAGGAAGCAAAGGGAGGTAG

Protein sequence

MATEEPVVPVESAAEPTDAEQAEENPTNKAAKSKKSKEPKEKKPAAPRKPRNPPTHPPYEEMIKDAIVTLKERTGSSQYAITKFIEEKQKQLPSNFKKLLLFHLKKLVASGKLVKVKSSFKLKPAKPAVVKPASPAKKKPVAAKPKSKAVAKPKAVAKSPAKPKAAAKPKPKTTAKPKAAPKPKPAPAKSKSSAVAKPKAAAKTKAAPKPKAKEKPAKAARTSTRTSPGRKAPAPKPVVKKAPAAKKAPSKSVKAKKVKSLAKKAPAKRGSKGR

Homology

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BLAST of PI0001777 vs. ExPASy Swiss-Prot
Match: P08283 (Histone H1 OS=Pisum sativum OX=3888 PE=2 SV=1)

HSP 1 Score: 188.0 bits (476), Expect = 1.5e-46
Identity = 163/283 (57.60%), Postives = 186/283 (65.72%), Query Frame = 0


Query: 1   MATEEPVVPVESAAEP--------TDAEQAE-ENPTNKAAKSKKSKEPKEKKPAAPRKPR 60
           MATEEP+V VE+  EP        T+ E  E E P  +  K+KK+K  K KK +   KPR
Sbjct: 1   MATEEPIVAVETVPEPIVTEPTTITEPEVPEKEEPKAEVEKTKKAKGSKPKKAS---KPR 60

Query: 61  NPPTHPPYEEMIKDAIVTLKERTGSSQYAITKFIEEKQKQLPSNFKKLLLFHLKKLVASG 120
           NP +HP YEEMIKDAIV+LKE+ GSSQYAI KFIEEKQKQLP+NFKKLLL +LKK VASG
Sbjct: 61  NPASHPTYEEMIKDAIVSLKEKNGSSQYAIAKFIEEKQKQLPANFKKLLLQNLKKNVASG 120

Query: 121 KLVKVKSSFKLKPAKPAVVKPASPAKKKPVAAKPKSKAVAKPKAV-AKSPAKPKAAAKPK 180
           KL+KVK SFKL           S A KKP  AKPK+K  AK K+V AK  AKPKA A  K
Sbjct: 121 KLIKVKGSFKL-----------SAAAKKPAVAKPKAKTAAKAKSVKAKPAAKPKAKAVVK 180

Query: 181 PKTTAKPKA-APKPKPAPAKSKSSAVAKPKAAAKTKAAPKPKAKEKPAKAARTSTRTSPG 240
           PK  +K KA A KPK A AK K+ A      AAK KA  KPK+K KPAK A+TS +T+PG
Sbjct: 181 PKVASKAKAVAAKPKKAAAKPKTVAAKTKPTAAKPKAVVKPKSKVKPAKVAKTSVKTTPG 240

Query: 241 RKAPAPKPVVKKAPAAKKAPSKSVKAKKVKSLAKKAPAKRGSK 273
           +K  A K V     AAKK P KSVKAK VKS  KK   KRG +
Sbjct: 241 KKVAAVKKV-----AAKKVPVKSVKAKSVKSPVKKVSVKRGGR 264

[Close]

BLAST of PI0001777 vs. ExPASy Swiss-Prot
Match: P37218 (Histone H1 OS=Solanum lycopersicum OX=4081 PE=3 SV=1)

HSP 1 Score: 186.8 bits (473), Expect = 3.3e-46
Identity = 176/297 (59.26%), Postives = 188/297 (63.30%), Query Frame = 0


Query: 1   MATEEPVVPVESAAEPTDAEQAEENPTNKAAKSKKSKEPKEKKPAAPRKPRNPPTHPPYE 60
           MATEEPV+  E   E    E  ++     A   K  KE K KKPAAPRK    PTHPPY 
Sbjct: 1   MATEEPVIVNEVVEEQAAPETVKDEANPPAKSGKAKKETKAKKPAAPRKRSATPTHPPYF 60

Query: 61  EMIKDAIVTLKERTGSSQYAITKFIEEKQKQLPSNFKKLLLFHLKKLVASGKLVKVKSSF 120
           EMIKDAIVTLKERTGSSQ+AITKFIEEKQK LPSNFKKLLL  LKK VAS KLVKVK+S+
Sbjct: 61  EMIKDAIVTLKERTGSSQHAITKFIEEKQKSLPSNFKKLLLTQLKKFVASEKLVKVKNSY 120

Query: 121 KL-KPAKPAVVKPASPAKKKPVAAKPKSKAVAKPKAVAKSPAKPKAAAKP---------- 180
           KL   +KPA    A PAKKKP AA  KSK  AKPKA  K  AKP A AKP          
Sbjct: 121 KLPSGSKPAAA--AVPAKKKPAAA--KSKPAAKPKAAVKPKAKPAAKAKPAAKAKPAAKA 180

Query: 181 KPKTTAKPKAAPKP----KP-APAKSKSSAVAKPKAA-------AKTKAAPKP--KAKEK 240
           KP   AKP A  KP    KP A AK K++A AKPKAA       AKTKAA KP  KAK  
Sbjct: 181 KPAAKAKPAAKAKPAAKAKPVAKAKPKAAAAAKPKAAVKPKAAPAKTKAAVKPNLKAKTT 240

Query: 241 PAKAARTSTRTSPGRKAPAPKPVVKKAPAAKKAPSKSVKAKKVKSLAKKAPAKRGSK 273
            AK A+T+TRT+P RKA AP     KA  AKK P K   AK VKS AKKA  KRG K
Sbjct: 241 TAKVAKTATRTTPSRKA-AP-----KATPAKKEPVKKAPAKNVKSPAKKATPKRGRK 287

[Close]

BLAST of PI0001777 vs. ExPASy Swiss-Prot
Match: P26569 (Histone H1.2 OS=Arabidopsis thaliana OX=3702 GN=At2g30620 PE=1 SV=1)

HSP 1 Score: 171.8 bits (434), Expect = 1.1e-41
Identity = 163/286 (56.99%), Postives = 186/286 (65.03%), Query Frame = 0


Query: 1   MATEEPVVP--VESAAEPTDAEQAEENPTNKAAKSKKSKEPK-EKKP---AAPRKPRNPP 60
           M+ EE  VP  V+S A  T  +  E+ P  K  KSKK+   K  KKP   AAP K +   
Sbjct: 1   MSIEEENVPTTVDSGAADTTVKSPEKKPAAKGGKSKKTTTAKATKKPVKAAAPTKKKTTS 60

Query: 61  THPPYEEMIKDAIVTLKERTGSSQYAITKFIEEKQKQLPSNFKKLLLFHLKKLVASGKLV 120
           +HP YEEMIKDAIVTLKERTGSSQYAI KFIEEK K LP  F+KLLL +LK+LVAS KLV
Sbjct: 61  SHPTYEEMIKDAIVTLKERTGSSQYAIQKFIEEKHKSLPPTFRKLLLVNLKRLVASEKLV 120

Query: 121 KVKSSFKLKPAKPAVV-KPASPAKKK-PVAAKPKSK-----AVAKPKAVAKSPAKPKAAA 180
           KVK+SFK+  A+ A   KPA+P KKK  V AKPK K     A AK KA AK   KP A  
Sbjct: 121 KVKASFKIPSARSAATPKPAAPVKKKATVVAKPKGKVAAAVAPAKAKAAAKGTKKPAAKV 180

Query: 181 KPKPKTTAKPKAAPKPKPAPAKSKSSAVAKPKAAAKTKA-APKPKAKEKPAKAARTSTRT 240
             K K TAKPKA    K   AK KS +VA   A +KTKA A KPKAKE+PAKA+RTSTRT
Sbjct: 181 VAKAKVTAKPKA----KVTAAKPKSKSVA---AVSKTKAVAAKPKAKERPAKASRTSTRT 240

Query: 241 SPGRKAPAPKPVVKKAPAAKKAPSKSVKAKKVKSLAKKAPAKRGSK 273
           SPG+K  AP    KK    KKAP+KSV   KVKS AK+A  ++  K
Sbjct: 241 SPGKKVAAP---AKKVAVTKKAPAKSV---KVKSPAKRASTRKAKK 273

[Close]

BLAST of PI0001777 vs. ExPASy Swiss-Prot
Match: P27806 (Histone H1 OS=Triticum aestivum OX=4565 PE=2 SV=2)

HSP 1 Score: 137.5 bits (345), Expect = 2.3e-31
Identity = 135/259 (52.12%), Postives = 160/259 (61.78%), Query Frame = 0


Query: 2   ATEEPVVPVESAAEPTDAEQAEENPTNKAAKSKKSKEPKEKKPAAPRKPRNPPTHPPYEE 61
           A + PV  VE A     A+ A + P  K AK+ K+ + K+  P  P+KPR  P HP Y E
Sbjct: 7   AADIPVPQVEVA-----ADAAVDTPAAKPAKAPKAAKAKKSTP-GPKKPRVTPAHPSYAE 66

Query: 62  MIKDAIVTLKERTGSSQYAITKFIEEKQK-QLPSNFKKLLLFHLKKLVASGKLVKVKSSF 121
           M+ +AI  LKER+GSS  AI KFIE+K K  LP+NF+K+LL  +KKLVA+GKL KVK S+
Sbjct: 67  MVSEAIAALKERSGSSTIAIGKFIEDKHKAHLPANFRKILLTQIKKLVAAGKLTKVKGSY 126

Query: 122 KLKPAKPAVVKPASPAKKKPVAAKPKSKAVAKPKAVAKSPAKPKAAAKPKPKTTAKPKAA 181
           KL  A PA VKP +  KKKP AAKPK+KA AK K  AKSPAK KAAAKPK K        
Sbjct: 127 KLAKA-PAAVKPKTATKKKP-AAKPKAKAPAK-KTAAKSPAK-KAAAKPKAK-------- 186

Query: 182 PKPKPAPAKSKSSAVAKPKAAAKTKAAPKPKAKEKPAKAARTSTRTSPGRKAPAPKPVVK 241
                APAK+K  AVAKPKAAAK KAA KPKAK    KA   +T   P  + P   P  +
Sbjct: 187 -----APAKAK--AVAKPKAAAKPKAAAKPKAKAAAKKAPAAATPKKPAARKP---PTKR 237

Query: 242 KAPAAKKAPSKSVKAKKVK 260
             P  K AP+K   AKK K
Sbjct: 247 ATPVKKAAPAKKPAAKKAK 237

[Close]

BLAST of PI0001777 vs. ExPASy Swiss-Prot
Match: P23444 (Histone H1 OS=Zea mays OX=4577 PE=2 SV=2)

HSP 1 Score: 133.3 bits (334), Expect = 4.3e-30
Identity = 139/261 (53.26%), Postives = 164/261 (62.84%), Query Frame = 0


Query: 3   TEEPVVPVESAAE-PTDAEQAEENPTNKAAKSKKSKEPKEKKPAAPRKPRNPPTHPPYEE 62
           TE P   V++A E P DA  A     N AAK+KK+  PK+         R  PTH PY E
Sbjct: 6   TETPAPLVDAAPEAPADAPAAPAADAN-AAKAKKATAPKK---------RASPTHLPYAE 65

Query: 63  MIKDAIVTLKERTGSSQYAITKFIEEKQK-QLPSNFKKLLLFHLKKLVASGKLVKVKSSF 122
           M+ +AI +LKERTGSS YAI KF+E+K K +LP NF+KLL   LKKLVA GKL KVK+S+
Sbjct: 66  MVSEAITSLKERTGSSSYAIAKFVEDKHKAKLPPNFRKLLNVQLKKLVAGGKLTKVKNSY 125

Query: 123 KLKPAKPAVVKPASPAKKKPVAAKPKSKAVAKPKAVAKSPAKPKAAAKPKPKTTAKPKAA 182
           KL  A     KP + A KKP     K KA AKPK  AK+PAK K A KPKP   AKPKA 
Sbjct: 126 KLSSATKPNPKPKA-APKKPKTGAKKPKAAAKPK--AKTPAKAKPATKPKP--AAKPKAV 185

Query: 183 PKPK-PAPAKSKSSAVAKPKAAAKTKAAPKPKAKEK-PAKAARTSTRTSPGRKAPAPK-- 242
            KPK PA  K+K +A AKPK A    A PKP AK+   AKAA+TS + +PG+KAPA K  
Sbjct: 186 VKPKTPAKPKAKPAAKAKPKTAG---AKPKPLAKKAGRAKAAKTSAKDTPGKKAPAKKAA 245

Query: 243 PVVKKAPAAKKAPSKSVKAKK 258
           P  K A   +KAPS+  KAKK
Sbjct: 246 PSKKAATPVRKAPSR--KAKK 246

[Close]

BLAST of PI0001777 vs. ExPASy TrEMBL
Match: A0A1S3BL93 (histone H1 OS=Cucumis melo OX=3656 GN=LOC103491272 PE=3 SV=1)

HSP 1 Score: 435.3 bits (1118), Expect = 1.9e-118
Identity = 268/274 (97.81%), Postives = 270/274 (98.54%), Query Frame = 0


Query: 1   MATEEPVVPVESAAEPTDAEQAEENPTNKAAKSKKSKEPKEKKPAAPRKPRNPPTHPPYE 60
           MATEEPVVPVESAAEPT+AEQAEENP NKAAKSKKSKEPKEKKPAAPRKPRNPPTHPPYE
Sbjct: 1   MATEEPVVPVESAAEPTNAEQAEENPPNKAAKSKKSKEPKEKKPAAPRKPRNPPTHPPYE 60

Query: 61  EMIKDAIVTLKERTGSSQYAITKFIEEKQKQLPSNFKKLLLFHLKKLVASGKLVKVKSSF 120
           EMIKDAIVTLKERTGSSQYAITKFIEEKQKQLPSNFKKLLLFHLKKLVASGKLVKVKSSF
Sbjct: 61  EMIKDAIVTLKERTGSSQYAITKFIEEKQKQLPSNFKKLLLFHLKKLVASGKLVKVKSSF 120

Query: 121 KLKPAKPAVVKPASPAKKKPVAAKPKSKAVAKPKAVAKSPAKPKAAAKPKPKTTAKPKAA 180
           KLKPAK AVVKPASPAKKKPVAAKPKSKAVAKPKAVAKSPAKPKAAAKPKPKTTAKPKAA
Sbjct: 121 KLKPAKSAVVKPASPAKKKPVAAKPKSKAVAKPKAVAKSPAKPKAAAKPKPKTTAKPKAA 180

Query: 181 PKPKPAPAKSKSSAVAKPKAAAKTKAAPKPKAKEKPAKAARTSTRTSPGRKAPAPKPVVK 240
           PKPK AP KSKSSAVAKPKAAAKTKAAPKPKAKEKPAKAARTSTRTSPGRKAPAPKPVVK
Sbjct: 181 PKPKAAPPKSKSSAVAKPKAAAKTKAAPKPKAKEKPAKAARTSTRTSPGRKAPAPKPVVK 240

Query: 241 KAPAAKKAPSKSVKAKKVKSLAKKAPAKRGSKGR 275
           KAPAAKKAPSKSVKAKKVKSLAKKAP+KRGSKGR
Sbjct: 241 KAPAAKKAPSKSVKAKKVKSLAKKAPSKRGSKGR 274

[Close]

BLAST of PI0001777 vs. ExPASy TrEMBL
Match: A0A5A7UQL0 (Histone H1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold216G00660 PE=3 SV=1)

HSP 1 Score: 433.7 bits (1114), Expect = 5.6e-118
Identity = 267/273 (97.80%), Postives = 269/273 (98.53%), Query Frame = 0


Query: 1   MATEEPVVPVESAAEPTDAEQAEENPTNKAAKSKKSKEPKEKKPAAPRKPRNPPTHPPYE 60
           MATEEPVVPVESAAEPT+AEQAEENP NKAAKSKKSKEPKEKKPAAPRKPRNPPTHPPYE
Sbjct: 1   MATEEPVVPVESAAEPTNAEQAEENPPNKAAKSKKSKEPKEKKPAAPRKPRNPPTHPPYE 60

Query: 61  EMIKDAIVTLKERTGSSQYAITKFIEEKQKQLPSNFKKLLLFHLKKLVASGKLVKVKSSF 120
           EMIKDAIVTLKERTGSSQYAITKFIEEKQKQLPSNFKKLLLFHLKKLVASGKLVKVKSSF
Sbjct: 61  EMIKDAIVTLKERTGSSQYAITKFIEEKQKQLPSNFKKLLLFHLKKLVASGKLVKVKSSF 120

Query: 121 KLKPAKPAVVKPASPAKKKPVAAKPKSKAVAKPKAVAKSPAKPKAAAKPKPKTTAKPKAA 180
           KLKPAK AVVKPASPAKKKPVAAKPKSKAVAKPKAVAKSPAKPKAAAKPKPKTTAKPKAA
Sbjct: 121 KLKPAKSAVVKPASPAKKKPVAAKPKSKAVAKPKAVAKSPAKPKAAAKPKPKTTAKPKAA 180

Query: 181 PKPKPAPAKSKSSAVAKPKAAAKTKAAPKPKAKEKPAKAARTSTRTSPGRKAPAPKPVVK 240
           PKPK AP KSKSSAVAKPKAAAKTKAAPKPKAKEKPAKAARTSTRTSPGRKAPAPKPVVK
Sbjct: 181 PKPKAAPPKSKSSAVAKPKAAAKTKAAPKPKAKEKPAKAARTSTRTSPGRKAPAPKPVVK 240

Query: 241 KAPAAKKAPSKSVKAKKVKSLAKKAPAKRGSKG 274
           KAPAAKKAPSKSVKAKKVKSLAKKAP+KRGSKG
Sbjct: 241 KAPAAKKAPSKSVKAKKVKSLAKKAPSKRGSKG 273

[Close]

BLAST of PI0001777 vs. ExPASy TrEMBL
Match: A0A0A0KDR2 (H15 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G407650 PE=3 SV=1)

HSP 1 Score: 423.3 bits (1087), Expect = 7.6e-115
Identity = 260/274 (94.89%), Postives = 265/274 (96.72%), Query Frame = 0


Query: 1   MATEEPVVPVESAAEPTDAEQAEENPTNKAAKSKKSKEPKEKKPAAPRKPRNPPTHPPYE 60
           MATEEPVVPVESAAEPT+AEQAEENP NK+ +SKKSKEPK+KKPAAPRKPRNPPTHPPYE
Sbjct: 1   MATEEPVVPVESAAEPTNAEQAEENPANKSGRSKKSKEPKDKKPAAPRKPRNPPTHPPYE 60

Query: 61  EMIKDAIVTLKERTGSSQYAITKFIEEKQKQLPSNFKKLLLFHLKKLVASGKLVKVKSSF 120
           EMIKDAIVTLKERTGSSQYAITKFIEEKQKQLP NFKKLLLFHLKKLV SGKLVKVKSSF
Sbjct: 61  EMIKDAIVTLKERTGSSQYAITKFIEEKQKQLPPNFKKLLLFHLKKLVTSGKLVKVKSSF 120

Query: 121 KLKPAKPAVVKPASPAKKKPVAAKPKSKAVAKPKAVAKSPAKPKAAAKPKPKTTAKPKAA 180
           KLKPAK AVVKPASPAKKKPVAAKPKSK VAKPKAVAKSPAKPKAAAKPKPK T KPKAA
Sbjct: 121 KLKPAKSAVVKPASPAKKKPVAAKPKSKPVAKPKAVAKSPAKPKAAAKPKPKATPKPKAA 180

Query: 181 PKPKPAPAKSKSSAVAKPKAAAKTKAAPKPKAKEKPAKAARTSTRTSPGRKAPAPKPVVK 240
           PKPK APAKSKSSAVAKPKAAAKTKAAPKPKAKEKPAKAARTSTRTSPGRKAPAPKPVVK
Sbjct: 181 PKPKAAPAKSKSSAVAKPKAAAKTKAAPKPKAKEKPAKAARTSTRTSPGRKAPAPKPVVK 240

Query: 241 KAPAAKKAPSKSVKAKKVKSLAKKAPAKRGSKGR 275
           KAPAAKKAPSKSVKAKKVKSLAKK+PAKRGSKGR
Sbjct: 241 KAPAAKKAPSKSVKAKKVKSLAKKSPAKRGSKGR 274

[Close]

BLAST of PI0001777 vs. ExPASy TrEMBL
Match: A0A6J1CWP2 (histone H1 OS=Momordica charantia OX=3673 GN=LOC111015272 PE=3 SV=1)

HSP 1 Score: 405.6 bits (1041), Expect = 1.6e-109
Identity = 252/272 (92.65%), Postives = 254/272 (93.38%), Query Frame = 0


Query: 1   MATEEPVVPVESAAEPTDAEQAEENPTNKAAKSKKSKEPKEKKPAAPRKPRNPPTHPPYE 60
           MATEEPVVPVESAAEPT AE AEENP NKAAKSKKSKEPKEKKPAAPRKPRNPPTHPPYE
Sbjct: 1   MATEEPVVPVESAAEPTSAEAAEENPPNKAAKSKKSKEPKEKKPAAPRKPRNPPTHPPYE 60

Query: 61  EMIKDAIVTLKERTGSSQYAITKFIEEKQKQLPSNFKKLLLFHLKKLVASGKLVKVKSSF 120
           EMI DAIVTLKERTGSSQYAITKFIEEKQK LPSNFKKLLLFHLKKLVASGKLVKVKSSF
Sbjct: 61  EMINDAIVTLKERTGSSQYAITKFIEEKQKHLPSNFKKLLLFHLKKLVASGKLVKVKSSF 120

Query: 121 KLKPAKPAVVKPASPAKKKPVAAKPKSKAVAKPKAVAKSPAKPKAAAKPKPKTTAKPKAA 180
           KLKPAK AVVKP SPAKKKP AAKPK KA AK KAVAKSPAKPKAAAKPKPKT AKPKAA
Sbjct: 121 KLKPAKSAVVKPPSPAKKKPAAAKPKPKAAAKTKAVAKSPAKPKAAAKPKPKTAAKPKAA 180

Query: 181 PKPKPAPAKSKSSAVAKPKAAAKTKAAPKPKAKEKPAKAARTSTRTSPGRKAPAPKPVVK 240
           PKPKPAPAKSKSSAVAKPKAA KTKAAPKPKAKEKPAK ARTSTRTSPGR+APAPKP  K
Sbjct: 181 PKPKPAPAKSKSSAVAKPKAATKTKAAPKPKAKEKPAKVARTSTRTSPGRRAPAPKPAPK 240

Query: 241 KAPAAKKAPSKSVKAKKVKSLAKKAPAKRGSK 273
           KAPAAKKAP+KSVKAKKVKS AKKAPAKRG K
Sbjct: 241 KAPAAKKAPAKSVKAKKVKSPAKKAPAKRGKK 272

[Close]

BLAST of PI0001777 vs. ExPASy TrEMBL
Match: A0A1S3BGU4 (histone H1-like OS=Cucumis melo OX=3656 GN=LOC103489696 PE=3 SV=1)

HSP 1 Score: 380.2 bits (975), Expect = 7.4e-102
Identity = 243/272 (89.34%), Postives = 253/272 (93.01%), Query Frame = 0


Query: 1   MATEEPVVPVESAAEPTDAEQAEENPTNKAAKSKKSKEPKEKKPAAPRKPRNPPTHPPYE 60
           MATEEPVVPVE AAE T+AEQAEENP N+AAKSKKS+EPKEKKPAA RKPR+PPTHPPYE
Sbjct: 1   MATEEPVVPVEYAAELTNAEQAEENPANEAAKSKKSREPKEKKPAAHRKPRSPPTHPPYE 60

Query: 61  EMIKDAIVTLKERTGSSQYAITKFIEEKQKQLPSNFKKLLLFHLKKLVASGKLVKVKSSF 120
           EMIKDAIVTLKERTGSSQYAITKFIE KQKQLPSNFKKLLLFHLKKL+ASGKLVKVKSSF
Sbjct: 61  EMIKDAIVTLKERTGSSQYAITKFIETKQKQLPSNFKKLLLFHLKKLLASGKLVKVKSSF 120

Query: 121 KLKPAKPAVVKPASPAKKKPVAAKPKSKAVAKPKAVAKSPAKPKAAAKPKPKTTAKPKAA 180
           KL   KPAV KPASP  KKPVAAKP+SK VAKPKAVAKSPAKPKAAAKPKPKT AKPKAA
Sbjct: 121 KL---KPAVAKPASPV-KKPVAAKPRSKTVAKPKAVAKSPAKPKAAAKPKPKTAAKPKAA 180

Query: 181 PKPKPAPAKSKSSAVAKPKAAAKTKAAPKPKAKEKPAKAARTSTRTSPGRKAPAPKPVVK 240
           PKPKPAPAKSKSSAVAKPKAA KTKAAPKPKAKEKPAK ARTSTRTSPGRKAPAPKPVVK
Sbjct: 181 PKPKPAPAKSKSSAVAKPKAATKTKAAPKPKAKEKPAKVARTSTRTSPGRKAPAPKPVVK 240

Query: 241 KAPAAKKAPSKSVKAKKVKSLAKKAPAKRGSK 273
           KAPAAKKA ++SVK+KKV+S AK APAKRG K
Sbjct: 241 KAPAAKKALARSVKSKKVESPAKTAPAKRGRK 268

[Close]

BLAST of PI0001777 vs. NCBI nr
Match: XP_008449373.1 (PREDICTED: histone H1 [Cucumis melo])

HSP 1 Score: 435.3 bits (1118), Expect = 4.0e-118
Identity = 268/274 (97.81%), Postives = 270/274 (98.54%), Query Frame = 0


Query: 1   MATEEPVVPVESAAEPTDAEQAEENPTNKAAKSKKSKEPKEKKPAAPRKPRNPPTHPPYE 60
           MATEEPVVPVESAAEPT+AEQAEENP NKAAKSKKSKEPKEKKPAAPRKPRNPPTHPPYE
Sbjct: 1   MATEEPVVPVESAAEPTNAEQAEENPPNKAAKSKKSKEPKEKKPAAPRKPRNPPTHPPYE 60

Query: 61  EMIKDAIVTLKERTGSSQYAITKFIEEKQKQLPSNFKKLLLFHLKKLVASGKLVKVKSSF 120
           EMIKDAIVTLKERTGSSQYAITKFIEEKQKQLPSNFKKLLLFHLKKLVASGKLVKVKSSF
Sbjct: 61  EMIKDAIVTLKERTGSSQYAITKFIEEKQKQLPSNFKKLLLFHLKKLVASGKLVKVKSSF 120

Query: 121 KLKPAKPAVVKPASPAKKKPVAAKPKSKAVAKPKAVAKSPAKPKAAAKPKPKTTAKPKAA 180
           KLKPAK AVVKPASPAKKKPVAAKPKSKAVAKPKAVAKSPAKPKAAAKPKPKTTAKPKAA
Sbjct: 121 KLKPAKSAVVKPASPAKKKPVAAKPKSKAVAKPKAVAKSPAKPKAAAKPKPKTTAKPKAA 180

Query: 181 PKPKPAPAKSKSSAVAKPKAAAKTKAAPKPKAKEKPAKAARTSTRTSPGRKAPAPKPVVK 240
           PKPK AP KSKSSAVAKPKAAAKTKAAPKPKAKEKPAKAARTSTRTSPGRKAPAPKPVVK
Sbjct: 181 PKPKAAPPKSKSSAVAKPKAAAKTKAAPKPKAKEKPAKAARTSTRTSPGRKAPAPKPVVK 240

Query: 241 KAPAAKKAPSKSVKAKKVKSLAKKAPAKRGSKGR 275
           KAPAAKKAPSKSVKAKKVKSLAKKAP+KRGSKGR
Sbjct: 241 KAPAAKKAPSKSVKAKKVKSLAKKAPSKRGSKGR 274

[Close]

BLAST of PI0001777 vs. NCBI nr
Match: KAA0057394.1 (histone H1 [Cucumis melo var. makuwa] >TYK30091.1 histone H1 [Cucumis melo var. makuwa])

HSP 1 Score: 433.7 bits (1114), Expect = 1.2e-117
Identity = 267/273 (97.80%), Postives = 269/273 (98.53%), Query Frame = 0


Query: 1   MATEEPVVPVESAAEPTDAEQAEENPTNKAAKSKKSKEPKEKKPAAPRKPRNPPTHPPYE 60
           MATEEPVVPVESAAEPT+AEQAEENP NKAAKSKKSKEPKEKKPAAPRKPRNPPTHPPYE
Sbjct: 1   MATEEPVVPVESAAEPTNAEQAEENPPNKAAKSKKSKEPKEKKPAAPRKPRNPPTHPPYE 60

Query: 61  EMIKDAIVTLKERTGSSQYAITKFIEEKQKQLPSNFKKLLLFHLKKLVASGKLVKVKSSF 120
           EMIKDAIVTLKERTGSSQYAITKFIEEKQKQLPSNFKKLLLFHLKKLVASGKLVKVKSSF
Sbjct: 61  EMIKDAIVTLKERTGSSQYAITKFIEEKQKQLPSNFKKLLLFHLKKLVASGKLVKVKSSF 120

Query: 121 KLKPAKPAVVKPASPAKKKPVAAKPKSKAVAKPKAVAKSPAKPKAAAKPKPKTTAKPKAA 180
           KLKPAK AVVKPASPAKKKPVAAKPKSKAVAKPKAVAKSPAKPKAAAKPKPKTTAKPKAA
Sbjct: 121 KLKPAKSAVVKPASPAKKKPVAAKPKSKAVAKPKAVAKSPAKPKAAAKPKPKTTAKPKAA 180

Query: 181 PKPKPAPAKSKSSAVAKPKAAAKTKAAPKPKAKEKPAKAARTSTRTSPGRKAPAPKPVVK 240
           PKPK AP KSKSSAVAKPKAAAKTKAAPKPKAKEKPAKAARTSTRTSPGRKAPAPKPVVK
Sbjct: 181 PKPKAAPPKSKSSAVAKPKAAAKTKAAPKPKAKEKPAKAARTSTRTSPGRKAPAPKPVVK 240

Query: 241 KAPAAKKAPSKSVKAKKVKSLAKKAPAKRGSKG 274
           KAPAAKKAPSKSVKAKKVKSLAKKAP+KRGSKG
Sbjct: 241 KAPAAKKAPSKSVKAKKVKSLAKKAPSKRGSKG 273

[Close]

BLAST of PI0001777 vs. NCBI nr
Match: XP_004140078.1 (histone H1 [Cucumis sativus] >KGN47855.1 hypothetical protein Csa_003138 [Cucumis sativus])

HSP 1 Score: 423.3 bits (1087), Expect = 1.6e-114
Identity = 260/274 (94.89%), Postives = 265/274 (96.72%), Query Frame = 0


Query: 1   MATEEPVVPVESAAEPTDAEQAEENPTNKAAKSKKSKEPKEKKPAAPRKPRNPPTHPPYE 60
           MATEEPVVPVESAAEPT+AEQAEENP NK+ +SKKSKEPK+KKPAAPRKPRNPPTHPPYE
Sbjct: 1   MATEEPVVPVESAAEPTNAEQAEENPANKSGRSKKSKEPKDKKPAAPRKPRNPPTHPPYE 60

Query: 61  EMIKDAIVTLKERTGSSQYAITKFIEEKQKQLPSNFKKLLLFHLKKLVASGKLVKVKSSF 120
           EMIKDAIVTLKERTGSSQYAITKFIEEKQKQLP NFKKLLLFHLKKLV SGKLVKVKSSF
Sbjct: 61  EMIKDAIVTLKERTGSSQYAITKFIEEKQKQLPPNFKKLLLFHLKKLVTSGKLVKVKSSF 120

Query: 121 KLKPAKPAVVKPASPAKKKPVAAKPKSKAVAKPKAVAKSPAKPKAAAKPKPKTTAKPKAA 180
           KLKPAK AVVKPASPAKKKPVAAKPKSK VAKPKAVAKSPAKPKAAAKPKPK T KPKAA
Sbjct: 121 KLKPAKSAVVKPASPAKKKPVAAKPKSKPVAKPKAVAKSPAKPKAAAKPKPKATPKPKAA 180

Query: 181 PKPKPAPAKSKSSAVAKPKAAAKTKAAPKPKAKEKPAKAARTSTRTSPGRKAPAPKPVVK 240
           PKPK APAKSKSSAVAKPKAAAKTKAAPKPKAKEKPAKAARTSTRTSPGRKAPAPKPVVK
Sbjct: 181 PKPKAAPAKSKSSAVAKPKAAAKTKAAPKPKAKEKPAKAARTSTRTSPGRKAPAPKPVVK 240

Query: 241 KAPAAKKAPSKSVKAKKVKSLAKKAPAKRGSKGR 275
           KAPAAKKAPSKSVKAKKVKSLAKK+PAKRGSKGR
Sbjct: 241 KAPAAKKAPSKSVKAKKVKSLAKKSPAKRGSKGR 274

[Close]

BLAST of PI0001777 vs. NCBI nr
Match: XP_022145924.1 (histone H1 [Momordica charantia])

HSP 1 Score: 405.6 bits (1041), Expect = 3.4e-109
Identity = 252/272 (92.65%), Postives = 254/272 (93.38%), Query Frame = 0


Query: 1   MATEEPVVPVESAAEPTDAEQAEENPTNKAAKSKKSKEPKEKKPAAPRKPRNPPTHPPYE 60
           MATEEPVVPVESAAEPT AE AEENP NKAAKSKKSKEPKEKKPAAPRKPRNPPTHPPYE
Sbjct: 1   MATEEPVVPVESAAEPTSAEAAEENPPNKAAKSKKSKEPKEKKPAAPRKPRNPPTHPPYE 60

Query: 61  EMIKDAIVTLKERTGSSQYAITKFIEEKQKQLPSNFKKLLLFHLKKLVASGKLVKVKSSF 120
           EMI DAIVTLKERTGSSQYAITKFIEEKQK LPSNFKKLLLFHLKKLVASGKLVKVKSSF
Sbjct: 61  EMINDAIVTLKERTGSSQYAITKFIEEKQKHLPSNFKKLLLFHLKKLVASGKLVKVKSSF 120

Query: 121 KLKPAKPAVVKPASPAKKKPVAAKPKSKAVAKPKAVAKSPAKPKAAAKPKPKTTAKPKAA 180
           KLKPAK AVVKP SPAKKKP AAKPK KA AK KAVAKSPAKPKAAAKPKPKT AKPKAA
Sbjct: 121 KLKPAKSAVVKPPSPAKKKPAAAKPKPKAAAKTKAVAKSPAKPKAAAKPKPKTAAKPKAA 180

Query: 181 PKPKPAPAKSKSSAVAKPKAAAKTKAAPKPKAKEKPAKAARTSTRTSPGRKAPAPKPVVK 240
           PKPKPAPAKSKSSAVAKPKAA KTKAAPKPKAKEKPAK ARTSTRTSPGR+APAPKP  K
Sbjct: 181 PKPKPAPAKSKSSAVAKPKAATKTKAAPKPKAKEKPAKVARTSTRTSPGRRAPAPKPAPK 240

Query: 241 KAPAAKKAPSKSVKAKKVKSLAKKAPAKRGSK 273
           KAPAAKKAP+KSVKAKKVKS AKKAPAKRG K
Sbjct: 241 KAPAAKKAPAKSVKAKKVKSPAKKAPAKRGKK 272

[Close]

BLAST of PI0001777 vs. NCBI nr
Match: XP_038888055.1 (histone H1-like [Benincasa hispida])

HSP 1 Score: 397.5 bits (1020), Expect = 9.3e-107
Identity = 248/272 (91.18%), Postives = 256/272 (94.12%), Query Frame = 0


Query: 1   MATEEPVVPVESAAEPTDAEQAEENPTNKAAKSKKSKEPKEKKPAAPRKPRNPPTHPPYE 60
           MATEEPVVPVESAAEP + EQAEENP NKAAKSKKSKEPKEKKPAA +K RNPPTHPPYE
Sbjct: 1   MATEEPVVPVESAAEPDNVEQAEENPANKAAKSKKSKEPKEKKPAARKKTRNPPTHPPYE 60

Query: 61  EMIKDAIVTLKERTGSSQYAITKFIEEKQKQLPSNFKKLLLFHLKKLVASGKLVKVKSSF 120
           EMIKDAIVTLKERTGSSQYAITKFIEEK+KQLP NFKK+LLFHLKKLVASGKLVKVK+SF
Sbjct: 61  EMIKDAIVTLKERTGSSQYAITKFIEEKEKQLPPNFKKILLFHLKKLVASGKLVKVKNSF 120

Query: 121 KLKPAKPAVVKPASPAKKKPVAAKPKSKAVAKPKAVAKSPAKPKAAAKPKPKTTAKPKAA 180
           KLKPAK A+VKPA+PAKKKPVAAKPKSKAVAKPKAVAKSPAKPKAAAKPKPKT AKPKAA
Sbjct: 121 KLKPAKSAIVKPAAPAKKKPVAAKPKSKAVAKPKAVAKSPAKPKAAAKPKPKTAAKPKAA 180

Query: 181 PKPKPAPAKSKSSAVAKPKAAAKTKAAPKPKAKEKPAKAARTSTRTSPGRKAPAPKPVVK 240
           PKPKPA AKSKSSAVAKPKAAAKTKAAPKPKAKEKPAK ARTSTRTSPGRKAPAPKP VK
Sbjct: 181 PKPKPATAKSKSSAVAKPKAAAKTKAAPKPKAKEKPAKVARTSTRTSPGRKAPAPKPAVK 240

Query: 241 KAPAAKKAPSKSVKAKKVKSLAKKAPAKRGSK 273
           KA A KKAP+KSVKAKKVKS AKKA AKRG K
Sbjct: 241 KAQATKKAPAKSVKAKKVKSPAKKALAKRGRK 272

[Close]

BLAST of PI0001777 vs. TAIR 10
Match: AT2G30620.1 (winged-helix DNA-binding transcription factor family protein )

HSP 1 Score: 171.8 bits (434), Expect = 7.7e-43
Identity = 163/286 (56.99%), Postives = 186/286 (65.03%), Query Frame = 0


Query: 1   MATEEPVVP--VESAAEPTDAEQAEENPTNKAAKSKKSKEPK-EKKP---AAPRKPRNPP 60
           M+ EE  VP  V+S A  T  +  E+ P  K  KSKK+   K  KKP   AAP K +   
Sbjct: 1   MSIEEENVPTTVDSGAADTTVKSPEKKPAAKGGKSKKTTTAKATKKPVKAAAPTKKKTTS 60

Query: 61  THPPYEEMIKDAIVTLKERTGSSQYAITKFIEEKQKQLPSNFKKLLLFHLKKLVASGKLV 120
           +HP YEEMIKDAIVTLKERTGSSQYAI KFIEEK K LP  F+KLLL +LK+LVAS KLV
Sbjct: 61  SHPTYEEMIKDAIVTLKERTGSSQYAIQKFIEEKHKSLPPTFRKLLLVNLKRLVASEKLV 120

Query: 121 KVKSSFKLKPAKPAVV-KPASPAKKK-PVAAKPKSK-----AVAKPKAVAKSPAKPKAAA 180
           KVK+SFK+  A+ A   KPA+P KKK  V AKPK K     A AK KA AK   KP A  
Sbjct: 121 KVKASFKIPSARSAATPKPAAPVKKKATVVAKPKGKVAAAVAPAKAKAAAKGTKKPAAKV 180

Query: 181 KPKPKTTAKPKAAPKPKPAPAKSKSSAVAKPKAAAKTKA-APKPKAKEKPAKAARTSTRT 240
             K K TAKPKA    K   AK KS +VA   A +KTKA A KPKAKE+PAKA+RTSTRT
Sbjct: 181 VAKAKVTAKPKA----KVTAAKPKSKSVA---AVSKTKAVAAKPKAKERPAKASRTSTRT 240

Query: 241 SPGRKAPAPKPVVKKAPAAKKAPSKSVKAKKVKSLAKKAPAKRGSK 273
           SPG+K  AP    KK    KKAP+KSV   KVKS AK+A  ++  K
Sbjct: 241 SPGKKVAAP---AKKVAVTKKAPAKSV---KVKSPAKRASTRKAKK 273

[Close]

BLAST of PI0001777 vs. TAIR 10
Match: AT1G06760.1 (winged-helix DNA-binding transcription factor family protein )

HSP 1 Score: 132.5 bits (332), Expect = 5.2e-31
Identity = 130/260 (50.00%), Postives = 154/260 (59.23%), Query Frame = 0


Query: 12  SAAEPTDAEQAEENPTNKAAKSKKSKEPKEKKP-AAPRKPRNPPTHPPYEEMIKDAIVTL 71
           +A  P      E+ P  K  K+K  KE KEKK  AA  K R   +HP YEEMIKDAIVTL
Sbjct: 17  AADAPVTDAAVEKKPAAKGRKTKNVKEVKEKKTVAAAPKKRTVSSHPTYEEMIKDAIVTL 76

Query: 72  KERTGSSQYAITKFIEEKQKQLPSNFKKLLLFHLKKLVASGKLVKVKSSFKLKPAKPAVV 131
           KERTGSSQYAI KFIEEK+K+LP  F+KLLL +LK+LVASGKLVKVK+SFKL  A     
Sbjct: 77  KERTGSSQYAIQKFIEEKRKELPPTFRKLLLLNLKRLVASGKLVKVKASFKLPSASAKAS 136

Query: 132 KPASPAKKK-PVAAKPKSKAVAKPKAVAKSPAKPKAAAKPKPKTTAKPKAAPKPKPAPAK 191
            P + A+K  P   KP + AV K K    + +K K     KPKT A  K   K K  P  
Sbjct: 137 SPKAAAEKSAPAKKKPATVAVTKAKRKVAAASKAKKTIAVKPKTAAAKKVTAKAKAKPVP 196

Query: 192 SKSSAVAKPKAAAKTKAAPKPKAKEKPAKAARTSTRTSPGRKAPAPKPVVKKAPAAKKAP 251
             ++A  K KA        KPKAK +PAKAA+T+  TSP +KA A    V      KK P
Sbjct: 197 RATAAATKRKA-----VDAKPKAKARPAKAAKTAKVTSPAKKAVAATKKVATVATKKKTP 256

Query: 252 -SKSVKAKKVKSLAKKAPAK 269
             K VK K VKS AK+A ++
Sbjct: 257 VKKVVKPKTVKSPAKRASSR 271

[Close]

BLAST of PI0001777 vs. TAIR 10
Match: AT2G30620.2 (winged-helix DNA-binding transcription factor family protein )

HSP 1 Score: 111.3 bits (277), Expect = 1.2e-24
Identity = 108/205 (52.68%), Postives = 125/205 (60.98%), Query Frame = 0


Query: 1   MATEEPVVP--VESAAEPTDAEQAEENPTNKAAKSKKSKEPK-EKKP---AAPRKPRNPP 60
           M+ EE  VP  V+S A  T  +  E+ P  K  KSKK+   K  KKP   AAP K +   
Sbjct: 1   MSIEEENVPTTVDSGAADTTVKSPEKKPAAKGGKSKKTTTAKATKKPVKAAAPTKKKTTS 60

Query: 61  THPPYEEMIKDAIVTLKERTGSSQYAITKFIEEKQKQLPSNFKKLLLFHLKKLVASGKLV 120
           +HP YEEMIKDAIVTLKERTGSSQYAI KFIEEK K LP  F+KLLL +LK+LVAS KLV
Sbjct: 61  SHPTYEEMIKDAIVTLKERTGSSQYAIQKFIEEKHKSLPPTFRKLLLVNLKRLVASEKLV 120

Query: 121 KVKSSFKLKPAKPAVV-KPASPAKKK-PVAAKPKSKAVAKPKAVAKSPAKPKAAAKPKPK 180
           KVK+SFK+  A+ A   KPA+P KKK  V AKPK    A   +   SP K  AA   K  
Sbjct: 121 KVKASFKIPSARSAATPKPAAPVKKKATVVAKPK----ASRTSTRTSPGKKVAAPAKKVA 180

Query: 181 TTAKPKAAPKPKPAPAKSKSSAVAK 198
            T K  A      +PAK  S+  AK
Sbjct: 181 VTKKAPAKSVKVKSPAKRASTRKAK 201

[Close]

BLAST of PI0001777 vs. TAIR 10
Match: AT2G18050.1 (histone H1-3 )

HSP 1 Score: 60.5 bits (145), Expect = 2.5e-09
Identity = 68/168 (40.48%), Postives = 92/168 (54.76%), Query Frame = 0


Query: 42  KKPAAPRKPRNP--PTHPPYEEMIKDAIVTLKERTGSSQYAITKFIEEKQKQ-LPSNFKK 101
           KK  A +KPR P   THPPY +MIK+A++ LKE+ GSS YAI K IEEK K  LP +F+K
Sbjct: 8   KKTPAAKKPRKPKTTTHPPYFQMIKEALMVLKEKNGSSPYAIAKKIEEKHKSLLPESFRK 67

Query: 102 LLLFHLKKLVASGKLVKVKSSFKLKPAKPAVVKPASPAKKKPVAAKPKSKAVAKPKAVAK 161
            L   LK  VA GKLVK+++S+KL      + +      KK +  K + K + K +  + 
Sbjct: 68  TLSLQLKNSVAKGKLVKIRASYKLSDTTKMITRQQDKKNKKNM--KQEDKEITK-RTRSS 127

Query: 162 SPAKPKAAAKPKPKTTAKPKAAPKPKPAPAKSKSSAVAKPKAAAKTKA 207
           S    K  +  K +   K K A +P     KS  S+V K KA   + A
Sbjct: 128 STRPKKTVSVNKQEKKRKVKKARQP-----KSIKSSVGKKKAMKASAA 167

[Close]

BLAST of PI0001777 vs. TAIR 10
Match: AT2G18050.2 (histone H1-3 )

HSP 1 Score: 45.1 bits (105), Expect = 1.1e-04
Identity = 56/146 (38.36%), Postives = 78/146 (53.42%), Query Frame = 0


Query: 62  MIKDAIVTLKERTGSSQYAITKFIEEKQKQ-LPSNFKKLLLFHLKKLVASGKLVKVKSSF 121
           MIK+A++ LKE+ GSS YAI K IEEK K  LP +F+K L   LK  VA GKLVK+++S+
Sbjct: 1   MIKEALMVLKEKNGSSPYAIAKKIEEKHKSLLPESFRKTLSLQLKNSVAKGKLVKIRASY 60

Query: 122 KLKPAKPAVVKPASPAKKKPVAAKPKSKAVAKPKAVAKSPAKPKAAAKPKPKTTAKPKAA 181
           KL      + +      KK +  K + K + K +  + S    K  +  K +   K K A
Sbjct: 61  KLSDTTKMITRQQDKKNKKNM--KQEDKEITK-RTRSSSTRPKKTVSVNKQEKKRKVKKA 120

Query: 182 PKPKPAPAKSKSSAVAKPKAAAKTKA 207
            +P     KS  S+V K KA   + A
Sbjct: 121 RQP-----KSIKSSVGKKKAMKASAA 138

The following BLAST results are available for this feature:

BLAST of PI0001777 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P08283	1.5e-46	57.60	Histone H1 OS=Pisum sativum OX=3888 PE=2 SV=1	[more]
P37218	3.3e-46	59.26	Histone H1 OS=Solanum lycopersicum OX=4081 PE=3 SV=1	[more]
P26569	1.1e-41	56.99	Histone H1.2 OS=Arabidopsis thaliana OX=3702 GN=At2g30620 PE=1 SV=1	[more]
P27806	2.3e-31	52.12	Histone H1 OS=Triticum aestivum OX=4565 PE=2 SV=2	[more]
P23444	4.3e-30	53.26	Histone H1 OS=Zea mays OX=4577 PE=2 SV=2	[more]

BLAST of PI0001777 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3BL93	1.9e-118	97.81	histone H1 OS=Cucumis melo OX=3656 GN=LOC103491272 PE=3 SV=1	[more]
A0A5A7UQL0	5.6e-118	97.80	Histone H1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold216G00660 PE=...	[more]
A0A0A0KDR2	7.6e-115	94.89	H15 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G407650 PE=3 SV...	[more]
A0A6J1CWP2	1.6e-109	92.65	histone H1 OS=Momordica charantia OX=3673 GN=LOC111015272 PE=3 SV=1	[more]
A0A1S3BGU4	7.4e-102	89.34	histone H1-like OS=Cucumis melo OX=3656 GN=LOC103489696 PE=3 SV=1	[more]

BLAST of PI0001777 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008449373.1	4.0e-118	97.81	PREDICTED: histone H1 [Cucumis melo]	[more]
KAA0057394.1	1.2e-117	97.80	histone H1 [Cucumis melo var. makuwa] >TYK30091.1 histone H1 [Cucumis melo var. ...	[more]
XP_004140078.1	1.6e-114	94.89	histone H1 [Cucumis sativus] >KGN47855.1 hypothetical protein Csa_003138 [Cucumi...	[more]
XP_022145924.1	3.4e-109	92.65	histone H1 [Momordica charantia]	[more]
XP_038888055.1	9.3e-107	91.18	histone H1-like [Benincasa hispida]	[more]

BLAST of PI0001777 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G30620.1	7.7e-43	56.99	winged-helix DNA-binding transcription factor family protein	[more]
AT1G06760.1	5.2e-31	50.00	winged-helix DNA-binding transcription factor family protein	[more]
AT2G30620.2	1.2e-24	52.68	winged-helix DNA-binding transcription factor family protein	[more]
AT2G18050.1	2.5e-09	40.48	histone H1-3	[more]
AT2G18050.2	1.1e-04	38.36	histone H1-3	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005819	Linker histone H1/H5	PRINTS	PR00624	HISTONEH5	coord: 182..199 score: 37.65 coord: 152..166 score: 40.74 coord: 204..223 score: 23.33 coord: 69..86 score: 43.21 coord: 42..63 score: 37.37
IPR005818	Linker histone H1/H5, domain H15	SMART	SM00526	h15plus2	coord: 53..119 e-value: 2.7E-34 score: 129.9
IPR005818	Linker histone H1/H5, domain H15	PFAM	PF00538	Linker_histone	coord: 56..122 e-value: 2.5E-19 score: 69.4
IPR005818	Linker histone H1/H5, domain H15	PROSITE	PS51504	H15	coord: 55..124 score: 30.695316
IPR005818	Linker histone H1/H5, domain H15	CDD	cd00073	H15	coord: 53..133 e-value: 2.13644E-19 score: 78.4319
IPR036388	Winged helix-like DNA-binding domain superfamily	GENE3D	1.10.10.10		coord: 50..139 e-value: 7.5E-24 score: 85.7
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 121..274
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 250..274
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..63
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 25..48
None	No IPR available	PANTHER	PTHR11467:SF131	HISTONE H1.1	coord: 2..272
None	No IPR available	PANTHER	PTHR11467	HISTONE H1	coord: 2..272
IPR036390	Winged helix DNA-binding domain superfamily	SUPERFAMILY	46785	"Winged helix" DNA-binding domain	coord: 52..129

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0001777.1	PI0001777.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0030261	chromosome condensation
biological_process	GO:0045910	negative regulation of DNA recombination
biological_process	GO:0006334	nucleosome assembly
biological_process	GO:0016584	nucleosome positioning
cellular_component	GO:0000786	nucleosome
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003690	double-stranded DNA binding
molecular_function	GO:0008168	methyltransferase activity
molecular_function	GO:0031492	nucleosomal DNA binding
molecular_function	GO:0003677	DNA binding