PI0001769 (gene) Melon (PI 482460) v1

Overview


Name	PI0001769
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	WUSCHEL-related homeobox 4
Location	chr03: 1213425 .. 1214822 (+)
RNA-Seq Expression	PI0001769
Synteny	PI0001769

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CATGAAGGTTCATCAGTTTGCACGTGGATTTTGGGACGAACCCTCTCTCCCTTGGCTGCAAACGCTTACGCCCTCTTGCTCCTAAACTTCAACAACCCACCTCCGATAACACAACCACCACCACCACCACCACCCTCACACTTTCGACCTCAAAACCTTCATCAAACCCGATTGTGGTCCTCGCAAACCAGGTTCCTCCCATGATCACAGCAAAGACTCTTCCTCCTCTTCCTCTTCACTCCAGGTAACTAATTAACAACTACTCTTTTAATTACAATACTTCGAATATCTAAAAAGAAAACACTTGGTTTGTACAGACAGGGGTGGAAACGCATCCAGGAGGGACACGGTGGAATCCAACTCAAGAACAAATTGGGATATTGGAGATGCTTTATAGTAGAGGAATGAGGACTCCCAATGCCCAACAAATCGAACACATCACTGCACAACTTGGAAACTACGGCAAGATTGAAGGCAAGAATGTTTTTTATTGGTTTCAAAATCATAAAGCCCGTGAACGACAGAAGCAGAAACGCAACAGTCTTGGTCTTCCACACTCTCCAAGAACTCCTCCTCCTCCTCCCATCATTCCCGCCTTCCACACGGTACGTTTCCGAAATAATCTGCATGTCTTCTAATAATCATTATCCCTGCTTCCGTATAAATTAATCATAACACGGGGAATATAAATTAATTTGCAGGGAGAGGAAGATAGTCCGTACAAGAGGAAGTGCTTGTATTGGGGTTTTGAGTGTTTGGTAGAAGATAATGGTTTAATGTGTAAAAAGGAGGAAGGTCATGATAGGACTTTGGAGTTATTCCCCTTGCACCCAGAACGCTGATGATCCAAATTTTTGGAAATTCAAAAAAAGAAAAAAAAATGCATCTTTTGCTATGATCGTAAGATGTTATGAATTCTCTTTTTCTTTTTCTTTTTTTCTCTCGTTTTCGAGAAAAAAAAAAAAAGAAAGGTCGAAAAATACCAACTACCACTTCTCTTCTTTGTACTCATGTATGACGTACTGCCAATTTTCTTATGTGAAAGAAAGCGGAGGATAAATCCTGATTTCTTTTCCTTTTAACAAAACTTCCTTTAGTTTTATGTTAGTGAGAAAAACGGTTCCTTTTTTGAGAAACACTTTGTTAAAATGGAAGGCTTTTTTAGGTTAAAAGTGAGGGAGAAGCTATATTGGACACTGAAGTCCACAAGGGCTACCTTCCTTCTTGTTTCTTATCCTTTTTCTTGGATTTCAAACTCTTCTTCCACTTTTTTCCAATAACTATTATGAATAAAATTCGAAACGTTAACAAAATTTGACCACTTACGGAAGACTTTCATAAAGTGGCATATCAACCCAATCTAAGGACATGAATTTTCAACTTTTTTTTTTTTAAAAA

mRNA sequence

CATGAAGGTTCATCAGTTTGCACGTGGATTTTGGGACGAACCCTCTCTCCCTTGGCTGCAAACGCTTACGCCCTCTTGCTCCTAAACTTCAACAACCCACCTCCGATAACACAACCACCACCACCACCACCACCCTCACACTTTCGACCTCAAAACCTTCATCAAACCCGATTGTGGTCCTCGCAAACCAGGTTCCTCCCATGATCACAGCAAAGACTCTTCCTCCTCTTCCTCTTCACTCCAGACAGGGGTGGAAACGCATCCAGGAGGGACACGGTGGAATCCAACTCAAGAACAAATTGGGATATTGGAGATGCTTTATAGTAGAGGAATGAGGACTCCCAATGCCCAACAAATCGAACACATCACTGCACAACTTGGAAACTACGGCAAGATTGAAGGCAAGAATGTTTTTTATTGGTTTCAAAATCATAAAGCCCGTGAACGACAGAAGCAGAAACGCAACAGTCTTGGTCTTCCACACTCTCCAAGAACTCCTCCTCCTCCTCCCATCATTCCCGCCTTCCACACGGGAGAGGAAGATAGTCCGTACAAGAGGAAGTGCTTGTATTGGGGTTTTGAGTGTTTGGTAGAAGATAATGGTTTAATGTGTAAAAAGGAGGAAGGTCATGATAGGACTTTGGAGTTATTCCCCTTGCACCCAGAACGCTGATGATCCAAATTTTTGGAAATTCAAAAAAAGAAAAAAAAATGCATCTTTTGCTATGATCGTAAGATGTTATGAATTCTCTTTTTCTTTTTCTTTTTTTCTCTCGTTTTCGAGAAAAAAAAAAAAAGAAAGGTCGAAAAATACCAACTACCACTTCTCTTCTTTGTACTCATGTATGACGTACTGCCAATTTTCTTATGTGAAAGAAAGCGGAGGATAAATCCTGATTTCTTTTCCTTTTAACAAAACTTCCTTTAGTTTTATGTTAGTGAGAAAAACGGTTCCTTTTTTGAGAAACACTTTGTTAAAATGGAAGGCTTTTTTAGGTTAAAAGTGAGGGAGAAGCTATATTGGACACTGAAGTCCACAAGGGCTACCTTCCTTCTTGTTTCTTATCCTTTTTCTTGGATTTCAAACTCTTCTTCCACTTTTTTCCAATAACTATTATGAATAAAATTCGAAACGTTAACAAAATTTGACCACTTACGGAAGACTTTCATAAAGTGGCATATCAACCCAATCTAAGGACATGAATTTTCAACTTTTTTTTTTTTAAAAA

Coding sequence (CDS)

ATGCTTTATAGTAGAGGAATGAGGACTCCCAATGCCCAACAAATCGAACACATCACTGCACAACTTGGAAACTACGGCAAGATTGAAGGCAAGAATGTTTTTTATTGGTTTCAAAATCATAAAGCCCGTGAACGACAGAAGCAGAAACGCAACAGTCTTGGTCTTCCACACTCTCCAAGAACTCCTCCTCCTCCTCCCATCATTCCCGCCTTCCACACGGGAGAGGAAGATAGTCCGTACAAGAGGAAGTGCTTGTATTGGGGTTTTGAGTGTTTGGTAGAAGATAATGGTTTAATGTGTAAAAAGGAGGAAGGTCATGATAGGACTTTGGAGTTATTCCCCTTGCACCCAGAACGCTGA

Protein sequence

MLYSRGMRTPNAQQIEHITAQLGNYGKIEGKNVFYWFQNHKARERQKQKRNSLGLPHSPRTPPPPPIIPAFHTGEEDSPYKRKCLYWGFECLVEDNGLMCKKEEGHDRTLELFPLHPER

Homology

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BLAST of PI0001769 vs. ExPASy Swiss-Prot
Match: Q6X7J9 (WUSCHEL-related homeobox 4 OS=Arabidopsis thaliana OX=3702 GN=WOX4 PE=1 SV=1)

HSP 1 Score: 118.2 bits (295), Expect = 6.2e-26
Identity = 74/147 (50.34%), Postives = 81/147 (55.10%), Query Frame = 0


Query: 1   MLYSRGMRTPNAQQIEHITAQLGNYGKIEGKNVFYWFQNHKARERQKQKRNSL------- 60
           MLY  GMRTPNAQQIEHIT QLG YGKIEGKNVFYWFQNHKARERQKQKRN+L       
Sbjct: 103 MLYKGGMRTPNAQQIEHITLQLGKYGKIEGKNVFYWFQNHKARERQKQKRNNLISLSCQS 162

Query: 61  ----------GLPHSPRTPPPPPII--PAFHTGE--EDSPYKRKCLYWGFECLVEDNGLM 119
                      +    RT     I+  P     E  E++ YKR C  WGFE L  +N   
Sbjct: 163 SFTTTGVFNPSVTMKTRTSSSLDIMREPMVEKEELVEENEYKRTCRSWGFENLEIENRRN 222

[Close]

BLAST of PI0001769 vs. ExPASy Swiss-Prot
Match: Q25AM2 (WUSCHEL-related homeobox 4 OS=Oryza sativa subsp. indica OX=39946 GN=WOX4 PE=3 SV=1)

HSP 1 Score: 104.8 bits (260), Expect = 7.1e-22
Identity = 61/134 (45.52%), Postives = 80/134 (59.70%), Query Frame = 0


Query: 1   MLYSRGMRTPNAQQIEHITAQLGNYGKIEGKNVFYWFQNHKARERQKQKRNSLGLPHSPR 60
           MLY  GMRTPN+ QIE IT +LG YG+IEGKNVFYWFQNHKARERQKQKR +L       
Sbjct: 105 MLYRGGMRTPNSVQIERITEELGKYGRIEGKNVFYWFQNHKARERQKQKRAAL----LTL 164

Query: 61  TPPPPPIIPAFHTGEEDSP-------------YKRKCLYWGFECLVEDNGLMCKKEEG-- 119
           +   P ++PA     +++P              KR+C  WG +   + + ++  +  G  
Sbjct: 165 STLDPSLLPATANETKEAPEKKEKDVEDGLASCKRRCKAWG-DGAGDGDAVVATEAAGGC 224

[Close]

BLAST of PI0001769 vs. ExPASy Swiss-Prot
Match: Q7XTV3 (WUSCHEL-related homeobox 4 OS=Oryza sativa subsp. japonica OX=39947 GN=WOX4 PE=2 SV=2)

HSP 1 Score: 104.8 bits (260), Expect = 7.1e-22
Identity = 61/134 (45.52%), Postives = 80/134 (59.70%), Query Frame = 0


Query: 1   MLYSRGMRTPNAQQIEHITAQLGNYGKIEGKNVFYWFQNHKARERQKQKRNSLGLPHSPR 60
           MLY  GMRTPN+ QIE IT +LG YG+IEGKNVFYWFQNHKARERQKQKR +L       
Sbjct: 105 MLYRGGMRTPNSVQIERITEELGKYGRIEGKNVFYWFQNHKARERQKQKRAAL----LTL 164

Query: 61  TPPPPPIIPAFHTGEEDSP-------------YKRKCLYWGFECLVEDNGLMCKKEEG-- 119
           +   P ++PA     +++P              KR+C  WG +   + + ++  +  G  
Sbjct: 165 STLDPSLLPATANETKEAPEKKEKDVEDGLASCKRRCKAWG-DGAGDGDAVVATEAAGGC 224

[Close]

BLAST of PI0001769 vs. ExPASy Swiss-Prot
Match: A2WWU7 (WUSCHEL-related homeobox 5 OS=Oryza sativa subsp. indica OX=39946 GN=WOX5 PE=3 SV=1)

HSP 1 Score: 83.6 bits (205), Expect = 1.7e-15
Identity = 41/68 (60.29%), Postives = 51/68 (75.00%), Query Frame = 0


Query: 2   LYSRGMRTPNAQQIEHITAQLGNYGKIEGKNVFYWFQNHKARERQKQKRNSLG-LPHSPR 61
           LY +G+RTP A+QI+ ITA+L  +G IEGKNVFYWFQNHKAR+RQKQK+ S        R
Sbjct: 58  LYRQGLRTPTAEQIQQITARLREHGHIEGKNVFYWFQNHKARQRQKQKQQSFDYFSKLFR 117

Query: 62  TPPPPPII 69
            PPP P++
Sbjct: 118 RPPPLPVL 125

[Close]

BLAST of PI0001769 vs. ExPASy Swiss-Prot
Match: Q8LR86 (WUSCHEL-related homeobox 5 OS=Oryza sativa subsp. japonica OX=39947 GN=WOX5 PE=2 SV=1)

HSP 1 Score: 83.6 bits (205), Expect = 1.7e-15
Identity = 41/68 (60.29%), Postives = 51/68 (75.00%), Query Frame = 0


Query: 2   LYSRGMRTPNAQQIEHITAQLGNYGKIEGKNVFYWFQNHKARERQKQKRNSLG-LPHSPR 61
           LY +G+RTP A+QI+ ITA+L  +G IEGKNVFYWFQNHKAR+RQKQK+ S        R
Sbjct: 58  LYRQGLRTPTAEQIQQITARLREHGHIEGKNVFYWFQNHKARQRQKQKQQSFDYFSKLFR 117

Query: 62  TPPPPPII 69
            PPP P++
Sbjct: 118 RPPPLPVL 125

[Close]

BLAST of PI0001769 vs. ExPASy TrEMBL
Match: A0A5A7V042 (WUSCHEL-related homeobox 4 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold501G00510 PE=4 SV=1)

HSP 1 Score: 260.4 bits (664), Expect = 3.7e-66
Identity = 118/119 (99.16%), Postives = 119/119 (100.00%), Query Frame = 0


Query: 1   MLYSRGMRTPNAQQIEHITAQLGNYGKIEGKNVFYWFQNHKARERQKQKRNSLGLPHSPR 60
           MLYSRGMRTPNAQQIEHITAQLGNYGKIEGKNVFYWFQNHKARERQKQKRNSLGLPHSPR
Sbjct: 105 MLYSRGMRTPNAQQIEHITAQLGNYGKIEGKNVFYWFQNHKARERQKQKRNSLGLPHSPR 164

Query: 61  TPPPPPIIPAFHTGEEDSPYKRKCLYWGFECLVEDNGLMCKKEEGHDRTLELFPLHPER 120
           TPPPPPIIPAFHTG+EDSPYKRKCLYWGFECLVEDNGLMCKKEEGHDRTLELFPLHPER
Sbjct: 165 TPPPPPIIPAFHTGDEDSPYKRKCLYWGFECLVEDNGLMCKKEEGHDRTLELFPLHPER 223

[Close]

BLAST of PI0001769 vs. ExPASy TrEMBL
Match: E5GB81 (Homeodomain transcription factor OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)

HSP 1 Score: 260.4 bits (664), Expect = 3.7e-66
Identity = 118/119 (99.16%), Postives = 119/119 (100.00%), Query Frame = 0


Query: 1   MLYSRGMRTPNAQQIEHITAQLGNYGKIEGKNVFYWFQNHKARERQKQKRNSLGLPHSPR 60
           MLYSRGMRTPNAQQIEHITAQLGNYGKIEGKNVFYWFQNHKARERQKQKRNSLGLPHSPR
Sbjct: 107 MLYSRGMRTPNAQQIEHITAQLGNYGKIEGKNVFYWFQNHKARERQKQKRNSLGLPHSPR 166

Query: 61  TPPPPPIIPAFHTGEEDSPYKRKCLYWGFECLVEDNGLMCKKEEGHDRTLELFPLHPER 120
           TPPPPPIIPAFHTG+EDSPYKRKCLYWGFECLVEDNGLMCKKEEGHDRTLELFPLHPER
Sbjct: 167 TPPPPPIIPAFHTGDEDSPYKRKCLYWGFECLVEDNGLMCKKEEGHDRTLELFPLHPER 225

[Close]

BLAST of PI0001769 vs. ExPASy TrEMBL
Match: A0A1S3BBG0 (WUSCHEL-related homeobox 4 OS=Cucumis melo OX=3656 GN=LOC103487871 PE=4 SV=1)

HSP 1 Score: 260.4 bits (664), Expect = 3.7e-66
Identity = 118/119 (99.16%), Postives = 119/119 (100.00%), Query Frame = 0


Query: 1   MLYSRGMRTPNAQQIEHITAQLGNYGKIEGKNVFYWFQNHKARERQKQKRNSLGLPHSPR 60
           MLYSRGMRTPNAQQIEHITAQLGNYGKIEGKNVFYWFQNHKARERQKQKRNSLGLPHSPR
Sbjct: 111 MLYSRGMRTPNAQQIEHITAQLGNYGKIEGKNVFYWFQNHKARERQKQKRNSLGLPHSPR 170

Query: 61  TPPPPPIIPAFHTGEEDSPYKRKCLYWGFECLVEDNGLMCKKEEGHDRTLELFPLHPER 120
           TPPPPPIIPAFHTG+EDSPYKRKCLYWGFECLVEDNGLMCKKEEGHDRTLELFPLHPER
Sbjct: 171 TPPPPPIIPAFHTGDEDSPYKRKCLYWGFECLVEDNGLMCKKEEGHDRTLELFPLHPER 229

[Close]

BLAST of PI0001769 vs. ExPASy TrEMBL
Match: A0A0A0LNZ2 (Homeobox domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G356610 PE=4 SV=1)

HSP 1 Score: 258.8 bits (660), Expect = 1.1e-65
Identity = 118/119 (99.16%), Postives = 118/119 (99.16%), Query Frame = 0


Query: 1   MLYSRGMRTPNAQQIEHITAQLGNYGKIEGKNVFYWFQNHKARERQKQKRNSLGLPHSPR 60
           MLYSRGMRTPNAQQIEHITAQLGNYGKIEGKNVFYWFQNHKARERQKQKRNSLGLPHSPR
Sbjct: 109 MLYSRGMRTPNAQQIEHITAQLGNYGKIEGKNVFYWFQNHKARERQKQKRNSLGLPHSPR 168

Query: 61  TPPPPPIIPAFHTGEEDSPYKRKCLYWGFECLVEDNGLMCKKEEGHDRTLELFPLHPER 120
           TPPPPPIIPAFHTGEEDSPYKRKCLYWGFECLVEDNGLMCKKEE HDRTLELFPLHPER
Sbjct: 169 TPPPPPIIPAFHTGEEDSPYKRKCLYWGFECLVEDNGLMCKKEEDHDRTLELFPLHPER 227

[Close]

BLAST of PI0001769 vs. ExPASy TrEMBL
Match: A0A6J1KA18 (WUSCHEL-related homeobox 4-like OS=Cucurbita maxima OX=3661 GN=LOC111492455 PE=4 SV=1)

HSP 1 Score: 228.4 bits (581), Expect = 1.6e-56
Identity = 108/121 (89.26%), Postives = 113/121 (93.39%), Query Frame = 0


Query: 1   MLYSRGMRTPNAQQIEHITAQLGNYGKIEGKNVFYWFQNHKARERQKQKRNSLGLPHSPR 60
           MLYSRGMRTPNAQQIEHITAQLGNYGKIEGKNVFYWFQNHKARERQKQKRNSLGLPHSPR
Sbjct: 129 MLYSRGMRTPNAQQIEHITAQLGNYGKIEGKNVFYWFQNHKARERQKQKRNSLGLPHSPR 188

Query: 61  TPPPPPIIPAFH---TGEEDSPYKRKCLYWGFECLVEDNGLMCKKEEGHDRTLELFPLHP 119
           T PPPPI+P FH    GEEDSPYK+KCLYWGFECLVE NG++CKKE+G DRTLELFPLHP
Sbjct: 189 T-PPPPILPTFHPSFPGEEDSPYKKKCLYWGFECLVEHNGILCKKEDG-DRTLELFPLHP 247

[Close]

BLAST of PI0001769 vs. NCBI nr
Match: KAA0060918.1 (WUSCHEL-related homeobox 4 [Cucumis melo var. makuwa])

HSP 1 Score: 260.4 bits (664), Expect = 7.7e-66
Identity = 118/119 (99.16%), Postives = 119/119 (100.00%), Query Frame = 0


Query: 1   MLYSRGMRTPNAQQIEHITAQLGNYGKIEGKNVFYWFQNHKARERQKQKRNSLGLPHSPR 60
           MLYSRGMRTPNAQQIEHITAQLGNYGKIEGKNVFYWFQNHKARERQKQKRNSLGLPHSPR
Sbjct: 105 MLYSRGMRTPNAQQIEHITAQLGNYGKIEGKNVFYWFQNHKARERQKQKRNSLGLPHSPR 164

Query: 61  TPPPPPIIPAFHTGEEDSPYKRKCLYWGFECLVEDNGLMCKKEEGHDRTLELFPLHPER 120
           TPPPPPIIPAFHTG+EDSPYKRKCLYWGFECLVEDNGLMCKKEEGHDRTLELFPLHPER
Sbjct: 165 TPPPPPIIPAFHTGDEDSPYKRKCLYWGFECLVEDNGLMCKKEEGHDRTLELFPLHPER 223

[Close]

BLAST of PI0001769 vs. NCBI nr
Match: ADN33723.1 (homeodomain transcription factor [Cucumis melo subsp. melo])

HSP 1 Score: 260.4 bits (664), Expect = 7.7e-66
Identity = 118/119 (99.16%), Postives = 119/119 (100.00%), Query Frame = 0


Query: 1   MLYSRGMRTPNAQQIEHITAQLGNYGKIEGKNVFYWFQNHKARERQKQKRNSLGLPHSPR 60
           MLYSRGMRTPNAQQIEHITAQLGNYGKIEGKNVFYWFQNHKARERQKQKRNSLGLPHSPR
Sbjct: 107 MLYSRGMRTPNAQQIEHITAQLGNYGKIEGKNVFYWFQNHKARERQKQKRNSLGLPHSPR 166

Query: 61  TPPPPPIIPAFHTGEEDSPYKRKCLYWGFECLVEDNGLMCKKEEGHDRTLELFPLHPER 120
           TPPPPPIIPAFHTG+EDSPYKRKCLYWGFECLVEDNGLMCKKEEGHDRTLELFPLHPER
Sbjct: 167 TPPPPPIIPAFHTGDEDSPYKRKCLYWGFECLVEDNGLMCKKEEGHDRTLELFPLHPER 225

[Close]

BLAST of PI0001769 vs. NCBI nr
Match: XP_008444600.1 (PREDICTED: WUSCHEL-related homeobox 4 [Cucumis melo])

HSP 1 Score: 260.4 bits (664), Expect = 7.7e-66
Identity = 118/119 (99.16%), Postives = 119/119 (100.00%), Query Frame = 0


Query: 1   MLYSRGMRTPNAQQIEHITAQLGNYGKIEGKNVFYWFQNHKARERQKQKRNSLGLPHSPR 60
           MLYSRGMRTPNAQQIEHITAQLGNYGKIEGKNVFYWFQNHKARERQKQKRNSLGLPHSPR
Sbjct: 111 MLYSRGMRTPNAQQIEHITAQLGNYGKIEGKNVFYWFQNHKARERQKQKRNSLGLPHSPR 170

Query: 61  TPPPPPIIPAFHTGEEDSPYKRKCLYWGFECLVEDNGLMCKKEEGHDRTLELFPLHPER 120
           TPPPPPIIPAFHTG+EDSPYKRKCLYWGFECLVEDNGLMCKKEEGHDRTLELFPLHPER
Sbjct: 171 TPPPPPIIPAFHTGDEDSPYKRKCLYWGFECLVEDNGLMCKKEEGHDRTLELFPLHPER 229

[Close]

BLAST of PI0001769 vs. NCBI nr
Match: XP_004142872.1 (WUSCHEL-related homeobox 4 [Cucumis sativus] >KGN62487.1 hypothetical protein Csa_018691 [Cucumis sativus])

HSP 1 Score: 258.8 bits (660), Expect = 2.2e-65
Identity = 118/119 (99.16%), Postives = 118/119 (99.16%), Query Frame = 0


Query: 1   MLYSRGMRTPNAQQIEHITAQLGNYGKIEGKNVFYWFQNHKARERQKQKRNSLGLPHSPR 60
           MLYSRGMRTPNAQQIEHITAQLGNYGKIEGKNVFYWFQNHKARERQKQKRNSLGLPHSPR
Sbjct: 109 MLYSRGMRTPNAQQIEHITAQLGNYGKIEGKNVFYWFQNHKARERQKQKRNSLGLPHSPR 168

Query: 61  TPPPPPIIPAFHTGEEDSPYKRKCLYWGFECLVEDNGLMCKKEEGHDRTLELFPLHPER 120
           TPPPPPIIPAFHTGEEDSPYKRKCLYWGFECLVEDNGLMCKKEE HDRTLELFPLHPER
Sbjct: 169 TPPPPPIIPAFHTGEEDSPYKRKCLYWGFECLVEDNGLMCKKEEDHDRTLELFPLHPER 227

[Close]

BLAST of PI0001769 vs. NCBI nr
Match: XP_038885673.1 (WUSCHEL-related homeobox 4 [Benincasa hispida])

HSP 1 Score: 255.0 bits (650), Expect = 3.2e-64
Identity = 117/120 (97.50%), Postives = 119/120 (99.17%), Query Frame = 0


Query: 1   MLYSRGMRTPNAQQIEHITAQLGNYGKIEGKNVFYWFQNHKARERQKQKRNSLGLPHSPR 60
           MLYSRGMRTPNAQQIEHITAQLGNYGKIEGKNVFYWFQNHKARERQKQKRNSLGLPHSPR
Sbjct: 116 MLYSRGMRTPNAQQIEHITAQLGNYGKIEGKNVFYWFQNHKARERQKQKRNSLGLPHSPR 175

Query: 61  TPPPPPIIPAFHTGEEDSPYKRKCLYWGFECLVEDNGLMCKKEEG-HDRTLELFPLHPER 120
           TPPPPPIIPAFHTGEEDSPYKRKCLYWGFECLVEDNG+MCKKE+G HDRTLELFPLHPER
Sbjct: 176 TPPPPPIIPAFHTGEEDSPYKRKCLYWGFECLVEDNGIMCKKEDGDHDRTLELFPLHPER 235

[Close]

BLAST of PI0001769 vs. TAIR 10
Match: AT1G46480.1 (WUSCHEL related homeobox 4 )

HSP 1 Score: 118.2 bits (295), Expect = 4.4e-27
Identity = 74/147 (50.34%), Postives = 81/147 (55.10%), Query Frame = 0


Query: 1   MLYSRGMRTPNAQQIEHITAQLGNYGKIEGKNVFYWFQNHKARERQKQKRNSL------- 60
           MLY  GMRTPNAQQIEHIT QLG YGKIEGKNVFYWFQNHKARERQKQKRN+L       
Sbjct: 103 MLYKGGMRTPNAQQIEHITLQLGKYGKIEGKNVFYWFQNHKARERQKQKRNNLISLSCQS 162

Query: 61  ----------GLPHSPRTPPPPPII--PAFHTGE--EDSPYKRKCLYWGFECLVEDNGLM 119
                      +    RT     I+  P     E  E++ YKR C  WGFE L  +N   
Sbjct: 163 SFTTTGVFNPSVTMKTRTSSSLDIMREPMVEKEELVEENEYKRTCRSWGFENLEIENRRN 222

[Close]

BLAST of PI0001769 vs. TAIR 10
Match: AT3G18010.1 (WUSCHEL related homeobox 1 )

HSP 1 Score: 82.0 bits (201), Expect = 3.5e-16
Identity = 37/49 (75.51%), Postives = 42/49 (85.71%), Query Frame = 0


Query: 2   LYSRGMRTPNAQQIEHITAQLGNYGKIEGKNVFYWFQNHKARERQKQKR 51
           LY +G RTP+A  I+ ITAQL  YGKIEGKNVFYWFQNHKARERQK++R
Sbjct: 90  LYRQGTRTPSADHIQQITAQLRRYGKIEGKNVFYWFQNHKARERQKRRR 138

[Close]

BLAST of PI0001769 vs. TAIR 10
Match: AT3G11260.1 (WUSCHEL related homeobox 5 )

HSP 1 Score: 81.3 bits (199), Expect = 5.9e-16
Identity = 46/115 (40.00%), Postives = 61/115 (53.04%), Query Frame = 0


Query: 2   LYSRGMRTPNAQQIEHITAQLGNYGKIEGKNVFYWFQNHKARERQKQKRNSLGLPHSPRT 61
           L+  G+RTP   QI+ I+ +L  YGKIE KNVFYWFQNHKARERQK+++ S+   H    
Sbjct: 38  LFRAGLRTPTTDQIQKISTELSFYGKIESKNVFYWFQNHKARERQKRRKISIDFDHHHHQ 97

Query: 62  PPPPPIIPAFHTGEEDSPYKRKCLYWGFECLVEDNGLMCKKEEGHDRTLELFPLH 117
           P    +   F   EED                      C++EE    TL+LFP++
Sbjct: 98  PSTRDV---FEISEED----------------------CQEEEKVIETLQLFPVN 127

[Close]

BLAST of PI0001769 vs. TAIR 10
Match: AT2G28610.1 (Homeodomain-like superfamily protein )

HSP 1 Score: 77.4 bits (189), Expect = 8.6e-15
Identity = 34/49 (69.39%), Postives = 41/49 (83.67%), Query Frame = 0


Query: 2  LYSRGMRTPNAQQIEHITAQLGNYGKIEGKNVFYWFQNHKARERQKQKR 51
          +Y  G+RTPNA QI+ ITA L  YG+IEGKNVFYWFQNHKAR+RQK ++
Sbjct: 22 MYRSGIRTPNAVQIQQITAHLAFYGRIEGKNVFYWFQNHKARDRQKLRK 70

[Close]

BLAST of PI0001769 vs. TAIR 10
Match: AT5G59340.1 (WUSCHEL related homeobox 2 )

HSP 1 Score: 76.6 bits (187), Expect = 1.5e-14
Identity = 40/70 (57.14%), Postives = 48/70 (68.57%), Query Frame = 0


Query: 2  LYSRGMRTPNAQQIEHITAQLGNYGKIEGKNVFYWFQNHKARERQKQKRNSLG-----LP 61
          LY  G+RTP+A QI+ IT +L  YG IEGKNVFYWFQNHKAR+RQKQK+  +      L 
Sbjct: 28 LYKEGIRTPSADQIQQITGRLRAYGHIEGKNVFYWFQNHKARQRQKQKQERMAYFNRLLH 87

Query: 62 HSPRTPPPPP 67
           + R   PPP
Sbjct: 88 KTSRFFYPPP 97

The following BLAST results are available for this feature:

BLAST of PI0001769 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q6X7J9	6.2e-26	50.34	WUSCHEL-related homeobox 4 OS=Arabidopsis thaliana OX=3702 GN=WOX4 PE=1 SV=1	[more]
Q25AM2	7.1e-22	45.52	WUSCHEL-related homeobox 4 OS=Oryza sativa subsp. indica OX=39946 GN=WOX4 PE=3 S...	[more]
Q7XTV3	7.1e-22	45.52	WUSCHEL-related homeobox 4 OS=Oryza sativa subsp. japonica OX=39947 GN=WOX4 PE=2...	[more]
A2WWU7	1.7e-15	60.29	WUSCHEL-related homeobox 5 OS=Oryza sativa subsp. indica OX=39946 GN=WOX5 PE=3 S...	[more]
Q8LR86	1.7e-15	60.29	WUSCHEL-related homeobox 5 OS=Oryza sativa subsp. japonica OX=39947 GN=WOX5 PE=2...	[more]

BLAST of PI0001769 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7V042	3.7e-66	99.16	WUSCHEL-related homeobox 4 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaff...	[more]
E5GB81	3.7e-66	99.16	Homeodomain transcription factor OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1	[more]
A0A1S3BBG0	3.7e-66	99.16	WUSCHEL-related homeobox 4 OS=Cucumis melo OX=3656 GN=LOC103487871 PE=4 SV=1	[more]
A0A0A0LNZ2	1.1e-65	99.16	Homeobox domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G356610 PE...	[more]
A0A6J1KA18	1.6e-56	89.26	WUSCHEL-related homeobox 4-like OS=Cucurbita maxima OX=3661 GN=LOC111492455 PE=4...	[more]

BLAST of PI0001769 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0060918.1	7.7e-66	99.16	WUSCHEL-related homeobox 4 [Cucumis melo var. makuwa]	[more]
ADN33723.1	7.7e-66	99.16	homeodomain transcription factor [Cucumis melo subsp. melo]	[more]
XP_008444600.1	7.7e-66	99.16	PREDICTED: WUSCHEL-related homeobox 4 [Cucumis melo]	[more]
XP_004142872.1	2.2e-65	99.16	WUSCHEL-related homeobox 4 [Cucumis sativus] >KGN62487.1 hypothetical protein Cs...	[more]
XP_038885673.1	3.2e-64	97.50	WUSCHEL-related homeobox 4 [Benincasa hispida]	[more]

BLAST of PI0001769 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G46480.1	4.4e-27	50.34	WUSCHEL related homeobox 4	[more]
AT3G18010.1	3.5e-16	75.51	WUSCHEL related homeobox 1	[more]
AT3G11260.1	5.9e-16	40.00	WUSCHEL related homeobox 5	[more]
AT2G28610.1	8.6e-15	69.39	Homeodomain-like superfamily protein	[more]
AT5G59340.1	1.5e-14	57.14	WUSCHEL related homeobox 2	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	1.10.10.60		coord: 2..53 e-value: 4.2E-6 score: 28.1
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 42..76
IPR001356	Homeobox domain	PFAM	PF00046	Homeodomain	coord: 5..46 e-value: 5.0E-12 score: 45.5
IPR001356	Homeobox domain	PROSITE	PS50071	HOMEOBOX_2	coord: 1..47 score: 8.745886
IPR044186	WUSCHEL-related homeobox 4	PANTHER	PTHR47716	WUSCHEL-RELATED HOMEOBOX 4	coord: 1..118
IPR009057	Homeobox-like domain superfamily	SUPERFAMILY	46689	Homeodomain-like	coord: 7..53

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0001769.1	PI0001769.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0051301	cell division
biological_process	GO:0010087	phloem or xylem histogenesis
biological_process	GO:0010067	procambium histogenesis
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	DNA-binding transcription factor activity