PI0001503 (gene) Melon (PI 482460) v1

Overview


Name	PI0001503
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	Gag/pol protein
Location	chr09: 9216210 .. 9218100 (+)
RNA-Seq Expression	PI0001503
Synteny	PI0001503

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCGGATCTTCAAGTCATCAAGATCACATTAGAGTACGTTCTGATGGCCCTGAATCAGAACGCCCTACATCATGGGGAAGTGGCGAACAAAAAATGCCACAATACACCCACTTGAAACACGGTAAGGGGAAGGTCTTACTGAAACCTCCGCCGGAAGCAGCTGACAATTTCTTGGAGGTTGAGGTTGATAATCAGGACAGAGGCGGTGCTCGAATTTCTTAACGAACGAGCAAAGAAGAGGAAAGAAGCCCACATCAAAAGGACTAAGGAAGCTCGTCGCCAAAAGGACGAGCGTGAGCGAAAAAGAGTTGATGCAATTCGAAAGGGGAAGAGCACACTAGAAATATGTTCACCGCCTAACGAGGTTGCAGAGCTTCACAAGAAGATCTCTGACAAGCTCGCACAAGTCTCGTTCGCTAAAACGAGGAAAACAATCGAAGCAGTTAAGGCTGCCTTAAAAAGGAAAGAAGAGAAGAAAAAGATGTTCGCAGAGTTGAGCGAGCAAGTAGCGGAGCTCCCAGCGAAAGCAAGAGCATTGGAGCCAGAGAGAAACCTCAAAGCAATCGCAGAAGAATTCGAGGATGAGTTAGAGGCGATGAGCCCACTTGACGACGGGCCACCGCCAAGAAAACCACGGGAGGTCGCAGGACCATCAAGAGGAAGGAAGAAAGCTGGGCGTTCTGGACCTGAAGAATGTCCATCAAGCGGTGACACCATAAACAAACCACCCTCTATCAACTCTCTCATCAAAGTTGAGAAGGGGTTGTTTCTGTTCAATGGTCAACTCCCGGATTTCCTCTACGCGCCAATTCAGGCGTTCGGATGGAAATCATTTTTCAAGGGGCACACCAAGATAAGATTAGGAGTGGTGGAAAAGTTTTACGCGGCTAAGCTCAACGCTGCAGAGTTTAGCGTACAAATAAGTGGAAAGACAGTGAGTTTCAGCGCGGAGGCCATCAATGCGTTGTATGATTTGCCCAATGACATTGAAACCTCAGGGCAAATATACGTAAACAGTCCTACGAAGAGGATGACCCGTGAAGCGCTGGAAATCATCGCATGGCCTGGGGCCGCATGGGAAGTAACGCCAACAGGGAAGTATCAGTTGTATCCACACCAACTAACCACTGAAGCAAGCGTGTGGTTGTTCTTTATCAAGAAAAAGATCTTCCCAACACGCCATGATAGCACCATCAATTTAGAGTCAGCAATGCTACTCTATTGTATCCTAGCGAAGAAGCGTGTTAATCTTGGCGAACTTATAGCCACATCCATTCTGTCATGGATGCGGGCTCCCAAAGGCGCGATGCCCTTCCCTTCTACCATTGAGGCCCTTTGCCTTAAAGTTGTGCCATTCTTATCCGCCATCCAAACCATCTCAATACCAGGCGGGCTGTGTAATCAAATGGCCTTAAACCGCATGATTACTTTCTATGGACACAAGGAAATGGAAAGGCGGGCAAAGACATTAGGCGACACACCTGAAGGAATGGCCCAAGCAGAAAGAAAAAGGAAGTCCCCAGTCGTCGCATCAACCCCCCCACCTAAAGCCAAAAAAACAAAGGTTCTTGCGACGAAGCAGCTTCCACTGAAATTTCTCCACTCCTCTCGCCCAATACAGCGAGCTACCCATCAGTCCAAAATTCCAGCAGCTCCAATCCTCCTCGCTCTTCTTCACCCATTCCAATCACCCCACCATCACCTAACATCTCTCCCCGCCATTCACCTCTCCCCCACATTTGTTCCCCTACCAACATCCCTCACCTTTCCCCACGACCGCCTACCCCTCCGCTCACAAAATCTACTTCTCCCCTTCCTTCCAAATCACCCTCACCAAGGCGGGCTGAACCTCTTTCGCCTTTTATTCTGTCGCCCATCATGGACCTGA

mRNA sequence

ATGGCCGGATCTTCAAGTCATCAAGATCACATTAGAGTACGTTCTGATGGCCCTGAATCAGAACGCCCTACATCATGGGGAAGTGGCGAACAAAAAATGCCACAATACACCCACTTGAAACACGAGGCGGTGCTCGAATTTCTTAACGAACGAGCAAAGAAGAGGAAAGAAGCCCACATCAAAAGGACTAAGGAAGCTCGTCGCCAAAAGGACGAGCGTGAGCGAAAAAGAGTTGATGCAATTCGAAAGGGGAAGAGCACACTAGAAATATGTTCACCGCCTAACGAGGTTGCAGAGCTTCACAAGAAGATCTCTGACAAGCTCGCACAAGTCTCGTTCGCTAAAACGAGGAAAACAATCGAAGCAGTTAAGGCTGCCTTAAAAAGGAAAGAAGAGAAGAAAAAGATGTTCGCAGAGTTGAGCGAGCAAGTAGCGGAGCTCCCAGCGAAAGCAAGAGCATTGGAGCCAGAGAGAAACCTCAAAGCAATCGCAGAAGAATTCGAGGATGAGTTAGAGGCGATGAGCCCACTTGACGACGGGCCACCGCCAAGAAAACCACGGGAGGTCGCAGGACCATCAAGAGGAAGGAAGAAAGCTGGGCGTTCTGGACCTGAAGAATGTCCATCAAGCGGTGACACCATAAACAAACCACCCTCTATCAACTCTCTCATCAAAGTTGAGAAGGGGTTGTTTCTGTTCAATGGTCAACTCCCGGATTTCCTCTACGCGCCAATTCAGGCGTTCGGATGGAAATCATTTTTCAAGGGGCACACCAAGATAAGATTAGGAGTGGTGGAAAAGTTTTACGCGGCTAAGCTCAACGCTGCAGAGTTTAGCGTACAAATAAGTGGAAAGACAGTGAGTTTCAGCGCGGAGGCCATCAATGCGTTGTATGATTTGCCCAATGACATTGAAACCTCAGGGCAAATATACGTAAACAGTCCTACGAAGAGGATGACCCGTGAAGCGCTGGAAATCATCGCATGGCCTGGGGCCGCATGGGAAGTAACGCCAACAGGGAAGTATCAGTTGTATCCACACCAACTAACCACTGAAGCAAGCGTGTGGTTGTTCTTTATCAAGAAAAAGATCTTCCCAACACGCCATGATAGCACCATCAATTTAGAGTCAGCAATGCTACTCTATTGTATCCTAGCGAAGAAGCGTGTTAATCTTGGCGAACTTATAGCCACATCCATTCTGTCATGGATGCGGGCTCCCAAAGGCGCGATGCCCTTCCCTTCTACCATTGAGGCCCTTTGCCTTAAAGTTGTGCCATTCTTATCCGCCATCCAAACCATCTCAATACCAGGCGGGCTGTGTAATCAAATGGCCTTAAACCGCATGATTACTTTCTATGGACACAAGGAAATGGAAAGGCGGGCAAAGACATTAGGCGACACACCTGAAGGAATGGCCCAAGCAGAAAGAAAAAGGAAGTCCCCAGTCGTCGCATCAACCCCCCCACCTAAAGCCAAAAAAACAAAGGTTCTTGCGACGAAGCAGCTTCCACTGAAATTTCTCCACTCCTCTCGCCCAATACAGCGAGCTACCCATCAGTCCAAAATTCCAGCAGCTCCAATCCTCCTCGCTCTTCTTCACCCATTCCAATCACCCCACCATCACCTAACATCTCTCCCCGCCATTCACCTCTCCCCCACATTTGTTCCCCTACCAACATCCCTCACCTTTCCCCACGACCGCCTACCCCTCCGCTCACAAAATCTACTTCTCCCCTTCCTTCCAAATCACCCTCACCAAGGCGGGCTGAACCTCTTTCGCCTTTTATTCTGTCGCCCATCATGGACCTGA

Coding sequence (CDS)

ATGGCCGGATCTTCAAGTCATCAAGATCACATTAGAGTACGTTCTGATGGCCCTGAATCAGAACGCCCTACATCATGGGGAAGTGGCGAACAAAAAATGCCACAATACACCCACTTGAAACACGAGGCGGTGCTCGAATTTCTTAACGAACGAGCAAAGAAGAGGAAAGAAGCCCACATCAAAAGGACTAAGGAAGCTCGTCGCCAAAAGGACGAGCGTGAGCGAAAAAGAGTTGATGCAATTCGAAAGGGGAAGAGCACACTAGAAATATGTTCACCGCCTAACGAGGTTGCAGAGCTTCACAAGAAGATCTCTGACAAGCTCGCACAAGTCTCGTTCGCTAAAACGAGGAAAACAATCGAAGCAGTTAAGGCTGCCTTAAAAAGGAAAGAAGAGAAGAAAAAGATGTTCGCAGAGTTGAGCGAGCAAGTAGCGGAGCTCCCAGCGAAAGCAAGAGCATTGGAGCCAGAGAGAAACCTCAAAGCAATCGCAGAAGAATTCGAGGATGAGTTAGAGGCGATGAGCCCACTTGACGACGGGCCACCGCCAAGAAAACCACGGGAGGTCGCAGGACCATCAAGAGGAAGGAAGAAAGCTGGGCGTTCTGGACCTGAAGAATGTCCATCAAGCGGTGACACCATAAACAAACCACCCTCTATCAACTCTCTCATCAAAGTTGAGAAGGGGTTGTTTCTGTTCAATGGTCAACTCCCGGATTTCCTCTACGCGCCAATTCAGGCGTTCGGATGGAAATCATTTTTCAAGGGGCACACCAAGATAAGATTAGGAGTGGTGGAAAAGTTTTACGCGGCTAAGCTCAACGCTGCAGAGTTTAGCGTACAAATAAGTGGAAAGACAGTGAGTTTCAGCGCGGAGGCCATCAATGCGTTGTATGATTTGCCCAATGACATTGAAACCTCAGGGCAAATATACGTAAACAGTCCTACGAAGAGGATGACCCGTGAAGCGCTGGAAATCATCGCATGGCCTGGGGCCGCATGGGAAGTAACGCCAACAGGGAAGTATCAGTTGTATCCACACCAACTAACCACTGAAGCAAGCGTGTGGTTGTTCTTTATCAAGAAAAAGATCTTCCCAACACGCCATGATAGCACCATCAATTTAGAGTCAGCAATGCTACTCTATTGTATCCTAGCGAAGAAGCGTGTTAATCTTGGCGAACTTATAGCCACATCCATTCTGTCATGGATGCGGGCTCCCAAAGGCGCGATGCCCTTCCCTTCTACCATTGAGGCCCTTTGCCTTAAAGTTGTGCCATTCTTATCCGCCATCCAAACCATCTCAATACCAGGCGGGCTGTGTAATCAAATGGCCTTAAACCGCATGATTACTTTCTATGGACACAAGGAAATGGAAAGGCGGGCAAAGACATTAGGCGACACACCTGAAGGAATGGCCCAAGCAGAAAGAAAAAGGAAGTCCCCAGTCGTCGCATCAACCCCCCCACCTAAAGCCAAAAAAACAAAGGTTCTTGCGACGAAGCAGCTTCCACTGAAATTTCTCCACTCCTCTCGCCCAATACAGCGAGCTACCCATCAGTCCAAAATTCCAGCAGCTCCAATCCTCCTCGCTCTTCTTCACCCATTCCAATCACCCCACCATCACCTAACATCTCTCCCCGCCATTCACCTCTCCCCCACATTTGTTCCCCTACCAACATCCCTCACCTTTCCCCACGACCGCCTACCCCTCCGCTCACAAAATCTACTTCTCCCCTTCCTTCCAAATCACCCTCACCAAGGCGGGCTGAACCTCTTTCGCCTTTTATTCTGTCGCCCATCATGGACCTGA

Protein sequence

MAGSSSHQDHIRVRSDGPESERPTSWGSGEQKMPQYTHLKHEAVLEFLNERAKKRKEAHIKRTKEARRQKDERERKRVDAIRKGKSTLEICSPPNEVAELHKKISDKLAQVSFAKTRKTIEAVKAALKRKEEKKKMFAELSEQVAELPAKARALEPERNLKAIAEEFEDELEAMSPLDDGPPPRKPREVAGPSRGRKKAGRSGPEECPSSGDTINKPPSINSLIKVEKGLFLFNGQLPDFLYAPIQAFGWKSFFKGHTKIRLGVVEKFYAAKLNAAEFSVQISGKTVSFSAEAINALYDLPNDIETSGQIYVNSPTKRMTREALEIIAWPGAAWEVTPTGKYQLYPHQLTTEASVWLFFIKKKIFPTRHDSTINLESAMLLYCILAKKRVNLGELIATSILSWMRAPKGAMPFPSTIEALCLKVVPFLSAIQTISIPGGLCNQMALNRMITFYGHKEMERRAKTLGDTPEGMAQAERKRKSPVVASTPPPKAKKTKVLATKQLPLKFLHSSRPIQRATHQSKIPAAPILLALLHPFQSPHHHLTSLPAIHLSPTFVPLPTSLTFPHDRLPLRSQNLLLPFLPNHPHQGGLNLFRLLFCRPSWT

Homology

[Close]

BLAST of PI0001503 vs. ExPASy TrEMBL
Match: A0A5A7V6M5 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold683G00020 PE=4 SV=1)

HSP 1 Score: 182.2 bits (461), Expect = 6.5e-42
Identity = 91/180 (50.56%), Postives = 121/180 (67.22%), Query Frame = 0


Query: 259 KIRLGVVEKFYAAKLNAAEFSVQISGKTVSFSAEAINALYDLPNDIETSGQIYVNSPTKR 318
           KIR+ VV KFY  K N ++  + I  +   F+ E IN LY+ PND E  GQ  V   TK 
Sbjct: 2   KIRMDVVHKFYDVKFNPSDLFITIEDEKFYFNVEVINELYNSPNDAEYLGQEIVTKSTKG 61

Query: 319 MTREALEIIAWPGAAWEVTPTG-KYQLYPHQLTTEASVWLFFIKKKIFPTRHDSTINLES 378
           + +EAL+++AWPG   EV P   +YQLYPH LTT+A+VW+FF K KIFPT +DSTI+++ 
Sbjct: 62  LAKEALKVVAWPGIMSEVKPMKLRYQLYPH-LTTKANVWMFFTKNKIFPTCYDSTISMDY 121

Query: 379 AMLLYCILAKKRVNLGELIATSILSWMRAPKGAMPFPSTIEALCLKVVPFLSAIQTISIP 438
            ++LYCI+ KK +NL E+I  +IL+WM  PK AMPFPS +E LCLK +P L      +IP
Sbjct: 122 TVILYCIMIKKAINLDEIIKAAILTWMEIPKEAMPFPSLMEKLCLKFLPSLVRYPEKNIP 180

[Close]

BLAST of PI0001503 vs. ExPASy TrEMBL
Match: A0A5A7TZE0 (Protein MNN4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold600G001090 PE=4 SV=1)

HSP 1 Score: 175.3 bits (443), Expect = 8.0e-40
Identity = 109/291 (37.46%), Postives = 157/291 (53.95%), Query Frame = 0


Query: 122 AVKAALKRKEEKKKMF-AELSEQVAELPAKARALEPERNLKAIAEEFEDELEAMSPLDD- 181
           A KA  K ++ KK++   ++  Q  +  A+ +    E+     ++EFE ELE +SPL+D 
Sbjct: 18  ARKAQEKTEKLKKRLLKIKVKAQGVKALAEEKKERKEKTTDEYSKEFEKELEELSPLEDR 77

Query: 182 --GPPPRKPREVAGPS----RGRKKAGRSGPEECPSSGDTINKPPSINSLIKVEKGLFLF 241
                P+K R + G        + K  +   E   S  + +     +     +EKG+F F
Sbjct: 78  VVEKQPKKKRVLEGQDAMKREKKNKTVQREQESQKSEQEGVLFAEELGKHFMIEKGIFPF 137

Query: 242 NGQLPDFLYAPIQAFGWKSFFKGHTKIRLGVVEKFYAAKLNAAEFSVQISGKTVSFSAEA 301
            GQLP FL +PI+A  WK FF+G T IR  V+  FY   +N       + GK V+F  + 
Sbjct: 138 KGQLPLFLTSPIKALKWKQFFEGVTTIRPSVMNLFYNGSINTERHYAIVKGKMVNFGPKV 197

Query: 302 INALYDLPNDIETSGQIYVNSPTKRMTREALEIIAWPGAAWEVTPTGKYQLYPHQLTTEA 361
           +N LY L     T        P+    + ALE +AWPG  W++TP  KYQL+PH L T A
Sbjct: 198 VNVLYGLRQ--TTVEYPIFKEPSDIDMQNALERVAWPGMKWDITPIKKYQLFPHNLKTTA 257

Query: 362 SVWLFFIKKKIFPTRHDSTINLESAMLLYCILAKKRVNLGELIATSILSWM 405
           SVWL FIKK + PTRHD+TI+LE  MLLYCI+ +  +N+ E+I   I +W+
Sbjct: 258 SVWLVFIKKNLMPTRHDNTISLERIMLLYCIMEEIPLNVDEIIYEPIEAWV 306

[Close]

BLAST of PI0001503 vs. ExPASy TrEMBL
Match: A0A5D3DVQ6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1142G00370 PE=4 SV=1)

HSP 1 Score: 162.2 bits (409), Expect = 7.0e-36
Identity = 101/285 (35.44%), Postives = 146/285 (51.23%), Query Frame = 0


Query: 165 EEF-EDELEAMSPLDDGPPPRKPREVAGPSRGRKKAGRSGPEECPSSGDTINKPPSINSL 224
           +EF E++   +SPL++    R+PR+      G+    R   E+     ++      + S 
Sbjct: 32  DEFGEEDWNNLSPLEEEVEDRQPRKKKKALEGQDAMRRVKKEKTQQEEESQEIEDDVLSA 91

Query: 225 -----IKVEKGLFLFNGQLPDFLYAPIQAFGWKSFFKGHTKIRLGVVEKFYAAKLNAAEF 284
                  VEKG F+F  QL  FL  PI+A GW+ F +G   IR GVV+ FY  K++  + 
Sbjct: 92  EERKHFMVEKGFFMFEVQLQLFLVTPIKALGWQEFLRGVIAIRSGVVKMFYNGKIDTEKH 151

Query: 285 SVQISGKTVSFSAEAINALYDLPNDIETSGQIYVNSPTKRMTREALEIIAWPGAAWEVTP 344
              +  +                             P+    +EALE +AW    W+VT 
Sbjct: 152 YAIVKER---------------------------REPSDCDMQEALERVAWARKKWDVTS 211

Query: 345 TGKYQLYPHQLTTEASVWLFFIKKKIFPTRHDSTINLESAMLLYCILAKKRVNLGELIAT 404
             KY+L+ H LTTEASVWL FIKKK+ PTRHD+TI+ E  MLLYCI+ +  V++ E+I  
Sbjct: 212 IKKYRLFLHNLTTEASVWLVFIKKKLMPTRHDNTISFERIMLLYCIMEEIPVDVDEIICD 271

Query: 405 SILSWMRAPKGAMPFPSTIEALCLKVVPFL-SAIQTISIPGGLCN 443
            I +W++ P+GA PFP  IE LCL+    L  + Q   +  G+CN
Sbjct: 272 HIKAWVQHPRGAKPFPHLIERLCLRSCSELEQSPQIACVQDGMCN 289

[Close]

BLAST of PI0001503 vs. ExPASy TrEMBL
Match: A0A5A7U806 (Transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold163G00620 PE=4 SV=1)

HSP 1 Score: 156.8 bits (395), Expect = 2.9e-34
Identity = 82/163 (50.31%), Postives = 106/163 (65.03%), Query Frame = 0


Query: 282  ISGKTVSFSAEAINALYDLPNDIET-SGQIYVNSPTKRMTREALEIIAWPGAAWEVTPTG 341
            +  + V F+ E IN LYDLPND+    GQ  +    +   ++ +++I WP A    TPT 
Sbjct: 1227 VEDEKVPFTTEEINELYDLPNDLGAYPGQRLIVDCREGDAKKIIKLIVWPEADCTSTPTR 1286

Query: 342  KYQLYPHQLTTEASVWLFFIKKKIFPTRHDSTINLESAMLLYCILAKKRVNLGELIATSI 401
            + QL+PHQLT EA+VWLFFIKKKIFPT HDSTI  E A++LYCI AKK  NLG ++  + 
Sbjct: 1287 RLQLFPHQLTIEANVWLFFIKKKIFPTHHDSTILTEYALVLYCINAKKPFNLGYVMNEAF 1346

Query: 402  LSWMRAPKGAMPFPSTIEALCLKVV-PFLSAIQTISIPGGLCN 443
            LSWMR PK A PFP+T++ LCLK +      I  I + GG CN
Sbjct: 1347 LSWMRNPKNAKPFPTTVKKLCLKYLDEEPREIPQIDMVGGKCN 1389

[Close]

BLAST of PI0001503 vs. ExPASy TrEMBL
Match: A0A5D3CVL7 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold94G00870 PE=4 SV=1)

HSP 1 Score: 156.8 bits (395), Expect = 2.9e-34
Identity = 82/163 (50.31%), Postives = 106/163 (65.03%), Query Frame = 0


Query: 282 ISGKTVSFSAEAINALYDLPNDIET-SGQIYVNSPTKRMTREALEIIAWPGAAWEVTPTG 341
           +  + V F+ E IN LYDLPND+    GQ  +    +   ++ +++I WP A    TPT 
Sbjct: 66  VEDEKVPFTTEEINELYDLPNDLGAYPGQRLIVDCREGDAKKIIKLIVWPEADCTSTPTR 125

Query: 342 KYQLYPHQLTTEASVWLFFIKKKIFPTRHDSTINLESAMLLYCILAKKRVNLGELIATSI 401
           + QL+PHQLT EA+VWLFFIKKKIFPT HDSTI  E A++LYCI AKK  NLG ++  + 
Sbjct: 126 RLQLFPHQLTIEANVWLFFIKKKIFPTHHDSTILTEYALVLYCINAKKPFNLGYVMNEAF 185

Query: 402 LSWMRAPKGAMPFPSTIEALCLKVV-PFLSAIQTISIPGGLCN 443
           LSWMR PK A PFP+T++ LCLK +      I  I + GG CN
Sbjct: 186 LSWMRNPKNAKPFPTTVKKLCLKYLDEEPREIPQIDMVGGKCN 228

[Close]

BLAST of PI0001503 vs. NCBI nr
Match: KAA0062900.1 (gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 182.2 bits (461), Expect = 1.3e-41
Identity = 91/180 (50.56%), Postives = 121/180 (67.22%), Query Frame = 0


Query: 259 KIRLGVVEKFYAAKLNAAEFSVQISGKTVSFSAEAINALYDLPNDIETSGQIYVNSPTKR 318
           KIR+ VV KFY  K N ++  + I  +   F+ E IN LY+ PND E  GQ  V   TK 
Sbjct: 2   KIRMDVVHKFYDVKFNPSDLFITIEDEKFYFNVEVINELYNSPNDAEYLGQEIVTKSTKG 61

Query: 319 MTREALEIIAWPGAAWEVTPTG-KYQLYPHQLTTEASVWLFFIKKKIFPTRHDSTINLES 378
           + +EAL+++AWPG   EV P   +YQLYPH LTT+A+VW+FF K KIFPT +DSTI+++ 
Sbjct: 62  LAKEALKVVAWPGIMSEVKPMKLRYQLYPH-LTTKANVWMFFTKNKIFPTCYDSTISMDY 121

Query: 379 AMLLYCILAKKRVNLGELIATSILSWMRAPKGAMPFPSTIEALCLKVVPFLSAIQTISIP 438
            ++LYCI+ KK +NL E+I  +IL+WM  PK AMPFPS +E LCLK +P L      +IP
Sbjct: 122 TVILYCIMIKKAINLDEIIKAAILTWMEIPKEAMPFPSLMEKLCLKFLPSLVRYPEKNIP 180

[Close]

BLAST of PI0001503 vs. NCBI nr
Match: KAA0048500.1 (protein MNN4-like [Cucumis melo var. makuwa] >TYK28291.1 protein MNN4-like [Cucumis melo var. makuwa])

HSP 1 Score: 175.3 bits (443), Expect = 1.6e-39
Identity = 109/291 (37.46%), Postives = 157/291 (53.95%), Query Frame = 0


Query: 122 AVKAALKRKEEKKKMF-AELSEQVAELPAKARALEPERNLKAIAEEFEDELEAMSPLDD- 181
           A KA  K ++ KK++   ++  Q  +  A+ +    E+     ++EFE ELE +SPL+D 
Sbjct: 18  ARKAQEKTEKLKKRLLKIKVKAQGVKALAEEKKERKEKTTDEYSKEFEKELEELSPLEDR 77

Query: 182 --GPPPRKPREVAGPS----RGRKKAGRSGPEECPSSGDTINKPPSINSLIKVEKGLFLF 241
                P+K R + G        + K  +   E   S  + +     +     +EKG+F F
Sbjct: 78  VVEKQPKKKRVLEGQDAMKREKKNKTVQREQESQKSEQEGVLFAEELGKHFMIEKGIFPF 137

Query: 242 NGQLPDFLYAPIQAFGWKSFFKGHTKIRLGVVEKFYAAKLNAAEFSVQISGKTVSFSAEA 301
            GQLP FL +PI+A  WK FF+G T IR  V+  FY   +N       + GK V+F  + 
Sbjct: 138 KGQLPLFLTSPIKALKWKQFFEGVTTIRPSVMNLFYNGSINTERHYAIVKGKMVNFGPKV 197

Query: 302 INALYDLPNDIETSGQIYVNSPTKRMTREALEIIAWPGAAWEVTPTGKYQLYPHQLTTEA 361
           +N LY L     T        P+    + ALE +AWPG  W++TP  KYQL+PH L T A
Sbjct: 198 VNVLYGLRQ--TTVEYPIFKEPSDIDMQNALERVAWPGMKWDITPIKKYQLFPHNLKTTA 257

Query: 362 SVWLFFIKKKIFPTRHDSTINLESAMLLYCILAKKRVNLGELIATSILSWM 405
           SVWL FIKK + PTRHD+TI+LE  MLLYCI+ +  +N+ E+I   I +W+
Sbjct: 258 SVWLVFIKKNLMPTRHDNTISLERIMLLYCIMEEIPLNVDEIIYEPIEAWV 306

[Close]

BLAST of PI0001503 vs. NCBI nr
Match: KAA0054837.1 (hypothetical protein E6C27_scaffold406G00150 [Cucumis melo var. makuwa] >TYK27771.1 hypothetical protein E5676_scaffold1142G00370 [Cucumis melo var. makuwa])

HSP 1 Score: 162.2 bits (409), Expect = 1.4e-35
Identity = 101/285 (35.44%), Postives = 146/285 (51.23%), Query Frame = 0


Query: 165 EEF-EDELEAMSPLDDGPPPRKPREVAGPSRGRKKAGRSGPEECPSSGDTINKPPSINSL 224
           +EF E++   +SPL++    R+PR+      G+    R   E+     ++      + S 
Sbjct: 32  DEFGEEDWNNLSPLEEEVEDRQPRKKKKALEGQDAMRRVKKEKTQQEEESQEIEDDVLSA 91

Query: 225 -----IKVEKGLFLFNGQLPDFLYAPIQAFGWKSFFKGHTKIRLGVVEKFYAAKLNAAEF 284
                  VEKG F+F  QL  FL  PI+A GW+ F +G   IR GVV+ FY  K++  + 
Sbjct: 92  EERKHFMVEKGFFMFEVQLQLFLVTPIKALGWQEFLRGVIAIRSGVVKMFYNGKIDTEKH 151

Query: 285 SVQISGKTVSFSAEAINALYDLPNDIETSGQIYVNSPTKRMTREALEIIAWPGAAWEVTP 344
              +  +                             P+    +EALE +AW    W+VT 
Sbjct: 152 YAIVKER---------------------------REPSDCDMQEALERVAWARKKWDVTS 211

Query: 345 TGKYQLYPHQLTTEASVWLFFIKKKIFPTRHDSTINLESAMLLYCILAKKRVNLGELIAT 404
             KY+L+ H LTTEASVWL FIKKK+ PTRHD+TI+ E  MLLYCI+ +  V++ E+I  
Sbjct: 212 IKKYRLFLHNLTTEASVWLVFIKKKLMPTRHDNTISFERIMLLYCIMEEIPVDVDEIICD 271

Query: 405 SILSWMRAPKGAMPFPSTIEALCLKVVPFL-SAIQTISIPGGLCN 443
            I +W++ P+GA PFP  IE LCL+    L  + Q   +  G+CN
Sbjct: 272 HIKAWVQHPRGAKPFPHLIERLCLRSCSELEQSPQIACVQDGMCN 289

[Close]

BLAST of PI0001503 vs. NCBI nr
Match: KAA0049609.1 (transposase [Cucumis melo var. makuwa])

HSP 1 Score: 156.8 bits (395), Expect = 6.1e-34
Identity = 82/163 (50.31%), Postives = 106/163 (65.03%), Query Frame = 0


Query: 282  ISGKTVSFSAEAINALYDLPNDIET-SGQIYVNSPTKRMTREALEIIAWPGAAWEVTPTG 341
            +  + V F+ E IN LYDLPND+    GQ  +    +   ++ +++I WP A    TPT 
Sbjct: 1227 VEDEKVPFTTEEINELYDLPNDLGAYPGQRLIVDCREGDAKKIIKLIVWPEADCTSTPTR 1286

Query: 342  KYQLYPHQLTTEASVWLFFIKKKIFPTRHDSTINLESAMLLYCILAKKRVNLGELIATSI 401
            + QL+PHQLT EA+VWLFFIKKKIFPT HDSTI  E A++LYCI AKK  NLG ++  + 
Sbjct: 1287 RLQLFPHQLTIEANVWLFFIKKKIFPTHHDSTILTEYALVLYCINAKKPFNLGYVMNEAF 1346

Query: 402  LSWMRAPKGAMPFPSTIEALCLKVV-PFLSAIQTISIPGGLCN 443
            LSWMR PK A PFP+T++ LCLK +      I  I + GG CN
Sbjct: 1347 LSWMRNPKNAKPFPTTVKKLCLKYLDEEPREIPQIDMVGGKCN 1389

[Close]

BLAST of PI0001503 vs. NCBI nr
Match: TYK15967.1 (hypothetical protein E5676_scaffold94G00870 [Cucumis melo var. makuwa])

HSP 1 Score: 156.8 bits (395), Expect = 6.1e-34
Identity = 82/163 (50.31%), Postives = 106/163 (65.03%), Query Frame = 0


Query: 282 ISGKTVSFSAEAINALYDLPNDIET-SGQIYVNSPTKRMTREALEIIAWPGAAWEVTPTG 341
           +  + V F+ E IN LYDLPND+    GQ  +    +   ++ +++I WP A    TPT 
Sbjct: 66  VEDEKVPFTTEEINELYDLPNDLGAYPGQRLIVDCREGDAKKIIKLIVWPEADCTSTPTR 125

Query: 342 KYQLYPHQLTTEASVWLFFIKKKIFPTRHDSTINLESAMLLYCILAKKRVNLGELIATSI 401
           + QL+PHQLT EA+VWLFFIKKKIFPT HDSTI  E A++LYCI AKK  NLG ++  + 
Sbjct: 126 RLQLFPHQLTIEANVWLFFIKKKIFPTHHDSTILTEYALVLYCINAKKPFNLGYVMNEAF 185

Query: 402 LSWMRAPKGAMPFPSTIEALCLKVV-PFLSAIQTISIPGGLCN 443
           LSWMR PK A PFP+T++ LCLK +      I  I + GG CN
Sbjct: 186 LSWMRNPKNAKPFPTTVKKLCLKYLDEEPREIPQIDMVGGKCN 228

The following BLAST results are available for this feature:

BLAST of PI0001503 vs.


Match Name	E-value	Identity	Description

BLAST of PI0001503 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7V6M5	6.5e-42	50.56	Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold683G0002...	[more]
A0A5A7TZE0	8.0e-40	37.46	Protein MNN4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold600G00...	[more]
A0A5D3DVQ6	7.0e-36	35.44	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5A7U806	2.9e-34	50.31	Transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold163G00620 PE...	[more]
A0A5D3CVL7	2.9e-34	50.31	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]

BLAST of PI0001503 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0062900.1	1.3e-41	50.56	gag/pol protein [Cucumis melo var. makuwa]	[more]
KAA0048500.1	1.6e-39	37.46	protein MNN4-like [Cucumis melo var. makuwa] >TYK28291.1 protein MNN4-like [Cucu...	[more]
KAA0054837.1	1.4e-35	35.44	hypothetical protein E6C27_scaffold406G00150 [Cucumis melo var. makuwa] >TYK2777...	[more]
KAA0049609.1	6.1e-34	50.31	transposase [Cucumis melo var. makuwa]	[more]
TYK15967.1	6.1e-34	50.31	hypothetical protein E5676_scaffold94G00870 [Cucumis melo var. makuwa]	[more]

BLAST of PI0001503 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 49..69
None	No IPR available	COILS	Coil	Coil	coord: 113..143
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 53..77
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 172..218
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 181..203
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 464..495
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..35

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0001503.1	PI0001503.1	mRNA