PI0001388 (gene) Melon (PI 482460) v1

Overview


Name	PI0001388
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	Nuclear transcription factor Y subunit
Location	chr05: 22022307 .. 22027838 (-)
RNA-Seq Expression	PI0001388
Synteny	PI0001388

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CCTCACCTGCCCGTCATAATTCTGTATCTCACAACACACTTCAACTGGGAACCTGCTTTACCCGCTTCATTCATTTCATTGAAACCAAACTTTGTATTTCTTATGCCGAAACCGGAAGATGCGGTTGTGGGTGATTGAAATAGCTGGAACTCAACTCGGGTCCCGCAGTGGGTGAAGGGAACAGTAGCCGTAGCTCTTGAATTTGAGTTCCCAAAAGCCTCTTTGCTTTACTCCAAATTACTATGCTCTCTCTCTCAGTATGACAATCGCTCAAGAACTGAATTGACTCTTCAACTCTTTTCTTTTTTTTTTCCCAGATTCTCAGCGCCCTTGTTTCCTGAATCTAGGGCTTTGGATTTCCTCAATTTTCCCTCCAAGTGAGTTCATCTCTTTTCTCTCACTTGATTATGCTTCTTTTTCTTCTCAGCTCTCGATATTACTCTAGGGTTTTCCCAATTCAGTTCTTTCTCTTTTGGGTTTTGTTTATTTTTTAGTGTTGTTCTTTTTTGCATGGAATCGTGTTTGTTTAAGTTTATTGATTCAAGCGGGTAGGATTTTGGATTTTGGATTACTAGAGTCGAGAATTTCACTTGGTGGGGTTTGTTTGTTTTGAGAATCGGGTGGAATTGGGATCTTGATGGGAATTTAGAAGTCACAAGTTTGTTGATTTTTGCTGTTTTTTTTTTTTAAGATTGAATTTGCTCCGTCGTGTTCTGTTTTGCTTCTTCGAATTGGAATCTATCCCACTTTTTGGGTATTGGGTTCTGTTTGTTGTTTGCATGTGGGGATTATGATTCGTGCAGTCCTTAATGGTTGAATTTAGGATGGATTGTCAGTCGTCAAATATCGAAGTGAAAGTTTTTTATGGAACGGTATTAGTTACCTCTTCCCTTGCATGTGGATCATTGGTATGCTCAGCTTAGATGCCAAAGAGAACTTATTTAATCCAAGATACTAAACTATGATTTGATATTTGGCTGGAGCGTTTAGGTGGATTCACTAATATTTTCCTGCGACTTATCCCCTTTCATTGTTTATATTTCTTGAGTTGCGGTTGGAAGAGTCATATAAAAGGGTCGCCTTTGATAGTTTCTAGTCTAGCATGGAGAGAGATGGAGCCCGAAATAATAAGATATGACCGTGGATGTAGATAACAGAAGTTGTTTTGAAATTTTATGCATGGAAATAAATAGAGCTCAACTCAACATTGCGGGAATTGGTTTATGCTTTGAGTTAAAGATTATGCTTCTCTTTTGTGTCTTCAAAATTGAAACTGAAGGAATTCCAAGTTGTGATTTAGCCGAGCCCATAAAGCATTTACAATTCCAAAATTCTGCAAGCACAAATTAGAAACTAATTTGTTTTCTGTCTTTGATCTTGAATTCAATTGATGAATATCTGGAGAAGTAAACCAGCTTAGCGTAAAAGACCTGAAGAAATTAAAGTTGTAGAGCATTTTACATCCAATGAAGTGATAAGCCTCATTCAAGCAATGATTGAGCAATGCTCTGCACAAGGATTGGAAATAAATAAAAAATACAATTAGAGATTTGGTGAGATTATCCAATTTGTAAGATACTTATTTTGGATGAGCCACAAGCTAATAGGATGAACTAAATGAGTAACAGTCAAAGTATGATATGGGAAAGATTATGTGATCATAATTGAAAGGAAATGAAAAACACAGTTAATTGACTTAAGGATGGCACTTACTGCTGCTTGAGGTTAAGCTTTTCTTGCTGATCATCTCCTAGCCTTTCCCTGTATTTTCTCGCAGTTTCCTGAATAGTGAAGACTAACCCACCCTCTAATCTGACAGAATACTATTGCCTCCACTCTCATCTCAGACCATTTTATTGAAGACTGTAAGCAAAATTGCTTCAGCTGGCTATTGAATGTTCTTTTTCTTTTTGTTCTCTCACACATGTTATTTTAAACCTATGGAATCAAACTATTTTCCCTTCTCTTCAGAAAAGAATATTGGACAAAGATGATTTTTAAGGTTTTCAAAATGTACAATGTTTAATTCTTCTTCGTTTTCTTTTGATGCCTTCTTTTCAGTGCTTTCATCATAGACTGATGGCCTCTTCTCCGTTTGTCCAACATTTGTTCTGCATGGTCTGTGTATTCTAGTCGATTCCATCCTTATGTCTTATCTAACACATGTATTTGTTAAGAAGGTATGCAGTCGAAGTCTAAAAGTGTGAATCAACTAGAATCTGAACCACCAAATATGCAGCAGACTAGTAGTTATTCGGAACCTTGGTGGCGTAGTATCGGGTACAATCATATCTCCCCACCAGCAGCTGGAGGAAATGTGTCCAATTCAACATCACTGGAATGCACTAATGGTGCTTCAGAATCTAATGATGGTCAGTCAATGTCAAATGATGATTTAAATGAAGATGATGATGATGACACCACAAAAGATTCACATGGTATGACCCTCAACTGGTGTTGTTGCTTGCTAAATCGTGTTATAGTTCAAAGAAAGGCACTTACTGTTTTTAGCCTCTTTGGTTATGAATTGCAATTATTATACATTTGAGGACAATGACAATATAGCCTCATTGGATTGTTAACAAACATGTTATTGTCAAATTCACCAGCAAGTTATGGGCAAGTACAGCACAACTGTCAGCATGCTGTTTCTGCTGCGCCTATAGTGCATGGTGGATGTATCACGCAACCTCCTCAGCTTGAACTTGTAGGCCATTCTATTGTGAGTTCAATTTGCAACTCTGGTTGATTATTATTATTATTATGATTTAAAAAAAATTAGAGACATCCTTCTGACTCTTGGAGTCCAGTTTTTGAACATTGAACAACATTGGTGGGATTATGAGCTTATTTCAATCTTTTACAGGCATGTGCATCAAACCCATATCAGGATCCTTATTATGCAGGAGTGATGGCTGCCTATGGGCATCAACCGGTATGTAGGTTAAAATCATAAAAGATTAGGTGATGAGATATTGAGATGGTACATATAGATATGTATATATTTCTTATAATTTTTGCACCATATACACAAACTTTTTAGGTGTATACTAGCCATAAGTAATTTTGATGGTACTCTTGCTTTTCTTTTCCTATTGCTTTACCTTTTCAAGTATTCATGAACTTTCAATGTTGTTCCTTGTTCAGATTTTCACTTTTTCAAACTATTTCAATTAAAATAACATACGACTGTATGAGTGTATGAGCACATCAAGCGAACTAACTGAAAATTTCAGTTTCTTGGAAGAGGTTGTAGTGTGATAGTTGCAATATCTTGGCGTGGAATTATTTGCTTATTGGCCACAATGACAAGGTCGTATGTCAGAATGTCTGGGGTCATTGTGCAATGTTACCACTTTTTCCTTATACGTAAGAATTGAAGCTTGCCCTTGACAAGTCCTTCTTATGGTAGGGTTACCCTCCTTTTCTTGGGATGCCACATGCTAGAATGGCGTTGCCCCTTGAGGTGACACAGGAGCCTGTTTTTGTGAATGCCAAACAATATCAAGGGATTCTAAGGCGAAGACAAGCACGTGCTAAAGCAGAGGTTGAGAACAAACTAATAAAAGTTAGAAAGGTACGACTGCTATTCAGATGATTGCCTTTCATGTACTACAACTTGTCTCTTATACATGTTAAAGTAGCTGGAAATCTAGCAATGCTGTCTAATTGTATTGCACGCTCATTCTTCCCTACCGTTCAAATTTGATTAGGTACTTTATAAAATTCTCTCACTGAGTAGTTTTCTATTGTTTAATTACTATAAACATGTGAGTGGAGGATGACTAAAAAATTACTTTGTTGTGCTTGACAGTGGGTGGATGTACTCACCTAGGCTTTTTTAACATAGGTATCATCAGTAATTTTTCAGGGAATATACTTGATTTATTTACCTATTCTACCCTGAATATTTTGAATGCTCAGGATATCATTATTGCCAAATTGATTAATATTCCAGCTACCCACATTGAAAAGGTTTGCTTTATTCTCATAATCAGATTCTGCGCAAGTGGGAAGTCAAGTAACCTAAGTATTCTAGCTTAAACTTGCTGCATGGATTGTTGAGTGCTAAAATGAATGTGGTTAGTACCAAACATCACACCAATATGAATTGCCAAGTCGTTGTTTGAAGACCTTACAAAACTTATAAAAAAATTCGAAGTGAGGGCATAATATTGCATTGTGATTATGGTTATGTAAGACCAGAGGTTCTCAACTGAAGGTAAAAGTATAATAAACCATCTCCATATAAAATCACAGCTGAGTTGGGATCAAAGCGTTTACGTTTTAAATTTTGACTTCTGAGCCTTCATTTACATTTCACATTGAATGTTGGGGTGACCATGTGTGGTCGACTTACACTAGTTCAAGTTGAGTTATACCGAGTCAAAGCTGGTCTTTCACAATTTCGTGATTTCTTCTTGCCATATATAGTTCCTTTTATAGCTAATTCATTACCATTTGAGATGAAGATGGCTTGGTTGACTCAGTAGTTTCTGCATACTGTATATATATGTATGGATTGGACACGGTTAGATTTGAAAAATCAAATGTCGTTGAGCGTTGGTTGGTCATTGAGCAGGTTATTGTTTCTGTATGTTTGCAGAGTGATGACTGTTCACACTCCACCTTTTTTTCCCTCCATTTGAACAATTCTTTTGCTATAGCTTATATCCAGGTTTGCATGTTTCTGAAGTTCCTCTAATATATAGCTTGTGTTGTGTTATGCAGCCATATCTGCATGAATCTCGTCACCAGCATGCCATGAGACGGGCAAGGGGTAGTGGAGGACGATTTGCCAAGAAAAATGAAGCTAATTCCTCGGGTTCTACTATGAAGGACAAGGACTCCGGTTCTGGTCAAGCTATCTCATCTCACTCTGCTGGTTCATCTGGTTCTGAAGCAGCACCTTGTGCCTTGGCCGAAACCTGGAATTCTTCCAATGGCCAACAAGAAGCAAGGACCCAGTTGCATGAGGCATATGAAGCTCGAAGTTATGTGAATGGAAGTAGCCAATTTCATAATTACAGTAGCTTCCAAGCTTCTTCCTATGGTTTACGGTCTGGTGAGAGAGGCGATGATGGAGACTGCTCGGGACAGCAGCGAAGTATCTCAGAAAATCAGGCTGCACAGAGGCGTCTTGCCATCAAGTGAACCTCCTGGTTGCATAAATATGGGCTGCCCCTCTTGGGGCTACATTCCCTGGCAGTTCTCTGCTAGGCGGCAAATCATTCTTGGCTTTGTTCTGGTGCTTGTTCCTTAATCGTAAAGGAGATGGATAATATAAGTTGGCCATTTGGACCTTAGTTCTAGTGAAGTCCTTGGATGCTTTATTCCATCAACCTCCCCCATTTTTAACTTGTGTATAGAACAGACTCCATAGATTTCAAACGCTGTTCTTCTCAATTTCCAAACAACCTTGTTTAATGGAATGCTTATCTGTTATGTACTTGTGAGTGTGTCTTGAACTTTGATCCATAATTTGGTTGCTAATTTCATAAAAGTTCTCCAGGTACCAAATATTTCTTGCTA

mRNA sequence

CCTCACCTGCCCGTCATAATTCTGTATCTCACAACACACTTCAACTGGGAACCTGCTTTACCCGCTTCATTCATTTCATTGAAACCAAACTTTGTATTTCTTATGCCGAAACCGGAAGATGCGGTTGTGGGTGATTGAAATAGCTGGAACTCAACTCGGGTCCCGCAGTGGGTGAAGGGAACAGTAGCCGTAGCTCTTGAATTTGAGTTCCCAAAAGCCTCTTTGCTTTACTCCAAATTACTATGCTCTCTCTCTCAGTATGACAATCGCTCAAGAACTGAATTGACTCTTCAACTCTTTTCTTTTTTTTTTCCCAGATTCTCAGCGCCCTTGTTTCCTGAATCTAGGGCTTTGGATTTCCTCAATTTTCCCTCCAAGTATGCAGTCGAAGTCTAAAAGTGTGAATCAACTAGAATCTGAACCACCAAATATGCAGCAGACTAGTAGTTATTCGGAACCTTGGTGGCGTAGTATCGGGTACAATCATATCTCCCCACCAGCAGCTGGAGGAAATGTGTCCAATTCAACATCACTGGAATGCACTAATGGTGCTTCAGAATCTAATGATGGTCAGTCAATGTCAAATGATGATTTAAATGAAGATGATGATGATGACACCACAAAAGATTCACATGCAAGTTATGGGCAAGTACAGCACAACTGTCAGCATGCTGTTTCTGCTGCGCCTATAGTGCATGGTGGATGTATCACGCAACCTCCTCAGCTTGAACTTGTAGGCCATTCTATTGCATGTGCATCAAACCCATATCAGGATCCTTATTATGCAGGAGTGATGGCTGCCTATGGGCATCAACCGGGTTACCCTCCTTTTCTTGGGATGCCACATGCTAGAATGGCGTTGCCCCTTGAGGTGACACAGGAGCCTGTTTTTGTGAATGCCAAACAATATCAAGGGATTCTAAGGCGAAGACAAGCACGTGCTAAAGCAGAGGTTGAGAACAAACTAATAAAAGTTAGAAAGCCATATCTGCATGAATCTCGTCACCAGCATGCCATGAGACGGGCAAGGGGTAGTGGAGGACGATTTGCCAAGAAAAATGAAGCTAATTCCTCGGGTTCTACTATGAAGGACAAGGACTCCGGTTCTGGTCAAGCTATCTCATCTCACTCTGCTGGTTCATCTGGTTCTGAAGCAGCACCTTGTGCCTTGGCCGAAACCTGGAATTCTTCCAATGGCCAACAAGAAGCAAGGACCCAGTTGCATGAGGCATATGAAGCTCGAAGTTATGTGAATGGAAGTAGCCAATTTCATAATTACAGTAGCTTCCAAGCTTCTTCCTATGGTTTACGGTCTGGTGAGAGAGGCGATGATGGAGACTGCTCGGGACAGCAGCGAAGTATCTCAGAAAATCAGGCTGCACAGAGGCGTCTTGCCATCAAGTGAACCTCCTGGTTGCATAAATATGGGCTGCCCCTCTTGGGGCTACATTCCCTGGCAGTTCTCTGCTAGGCGGCAAATCATTCTTGGCTTTGTTCTGGTGCTTGTTCCTTAATCGTAAAGGAGATGGATAATATAAGTTGGCCATTTGGACCTTAGTTCTAGTGAAGTCCTTGGATGCTTTATTCCATCAACCTCCCCCATTTTTAACTTGTGTATAGAACAGACTCCATAGATTTCAAACGCTGTTCTTCTCAATTTCCAAACAACCTTGTTTAATGGAATGCTTATCTGTTATGTACTTGTGAGTGTGTCTTGAACTTTGATCCATAATTTGGTTGCTAATTTCATAAAAGTTCTCCAGGTACCAAATATTTCTTGCTA

Coding sequence (CDS)

ATGCAGTCGAAGTCTAAAAGTGTGAATCAACTAGAATCTGAACCACCAAATATGCAGCAGACTAGTAGTTATTCGGAACCTTGGTGGCGTAGTATCGGGTACAATCATATCTCCCCACCAGCAGCTGGAGGAAATGTGTCCAATTCAACATCACTGGAATGCACTAATGGTGCTTCAGAATCTAATGATGGTCAGTCAATGTCAAATGATGATTTAAATGAAGATGATGATGATGACACCACAAAAGATTCACATGCAAGTTATGGGCAAGTACAGCACAACTGTCAGCATGCTGTTTCTGCTGCGCCTATAGTGCATGGTGGATGTATCACGCAACCTCCTCAGCTTGAACTTGTAGGCCATTCTATTGCATGTGCATCAAACCCATATCAGGATCCTTATTATGCAGGAGTGATGGCTGCCTATGGGCATCAACCGGGTTACCCTCCTTTTCTTGGGATGCCACATGCTAGAATGGCGTTGCCCCTTGAGGTGACACAGGAGCCTGTTTTTGTGAATGCCAAACAATATCAAGGGATTCTAAGGCGAAGACAAGCACGTGCTAAAGCAGAGGTTGAGAACAAACTAATAAAAGTTAGAAAGCCATATCTGCATGAATCTCGTCACCAGCATGCCATGAGACGGGCAAGGGGTAGTGGAGGACGATTTGCCAAGAAAAATGAAGCTAATTCCTCGGGTTCTACTATGAAGGACAAGGACTCCGGTTCTGGTCAAGCTATCTCATCTCACTCTGCTGGTTCATCTGGTTCTGAAGCAGCACCTTGTGCCTTGGCCGAAACCTGGAATTCTTCCAATGGCCAACAAGAAGCAAGGACCCAGTTGCATGAGGCATATGAAGCTCGAAGTTATGTGAATGGAAGTAGCCAATTTCATAATTACAGTAGCTTCCAAGCTTCTTCCTATGGTTTACGGTCTGGTGAGAGAGGCGATGATGGAGACTGCTCGGGACAGCAGCGAAGTATCTCAGAAAATCAGGCTGCACAGAGGCGTCTTGCCATCAAGTGA

Protein sequence

MQSKSKSVNQLESEPPNMQQTSSYSEPWWRSIGYNHISPPAAGGNVSNSTSLECTNGASESNDGQSMSNDDLNEDDDDDTTKDSHASYGQVQHNCQHAVSAAPIVHGGCITQPPQLELVGHSIACASNPYQDPYYAGVMAAYGHQPGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGILRRRQARAKAEVENKLIKVRKPYLHESRHQHAMRRARGSGGRFAKKNEANSSGSTMKDKDSGSGQAISSHSAGSSGSEAAPCALAETWNSSNGQQEARTQLHEAYEARSYVNGSSQFHNYSSFQASSYGLRSGERGDDGDCSGQQRSISENQAAQRRLAIK

Homology

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BLAST of PI0001388 vs. ExPASy Swiss-Prot
Match: Q9LXV5 (Nuclear transcription factor Y subunit A-1 OS=Arabidopsis thaliana OX=3702 GN=NFYA1 PE=2 SV=1)

HSP 1 Score: 208.8 bits (530), Expect = 1.0e-52
Identity = 141/278 (50.72%), Postives = 173/278 (62.23%), Query Frame = 0


Query: 1   MQSKSKSVNQLE-SEPPNMQQTSSYSEPWWRSIGYNHISPPAAGGNVSNSTSLECTNGAS 60
           MQSK    N+ E +    +QQ   Y+EPWW++  +  +      G  SNS+SL+C NG S
Sbjct: 1   MQSKPGRENEEEVNNHHAVQQPMMYAEPWWKNNSFGVVPQARPSGIPSNSSSLDCPNG-S 60

Query: 61  ESNDGQSMSNDDLNEDDDDDTTKDSHA---SYGQVQHNCQHAVSAAPI--VHGGCITQPP 120
           ESND  S S D     ++D T KDS A   S     H  +    A  I  +H   + QPP
Sbjct: 61  ESNDVHSASEDGALNGENDGTWKDSQAATSSRSVDNHGMEGNDPALSIRNMHDQPLVQPP 120

Query: 121 QLELVGHSIACASNPYQDPYYAGVMAAYGHQP-GYPPFLGMPHARMALPLEVTQEPVFVN 180
             ELVGH IAC  NPYQDPYY G+M AYGHQ  G+ P+LGMP  R ALPL++ QEPV+VN
Sbjct: 121 --ELVGHYIACVPNPYQDPYYGGLMGAYGHQQLGFRPYLGMPRERTALPLDMAQEPVYVN 180

Query: 181 AKQYQGILRRRQARAKAEVENKLIKVRKPYLHESRHQHAMRRARGSGGRFAKKNEANSSG 240
           AKQY+GILRRR+ARAKAE+E K+I+ RKPYLHESRH+HAMRRAR SGGRFAKK+E  +  
Sbjct: 181 AKQYEGILRRRKARAKAELERKVIRDRKPYLHESRHKHAMRRARASGGRFAKKSEVEAG- 240

Query: 241 STMKDKDSGSGQAISSHSAGSSGSEAAPCALAETWNSS 272
                +D+G        +  SSGSE       ET NSS
Sbjct: 241 -----EDAGGRDRERGSATNSSGSEQVETDSNETLNSS 269

[Close]

BLAST of PI0001388 vs. ExPASy Swiss-Prot
Match: Q945M9 (Nuclear transcription factor Y subunit A-9 OS=Arabidopsis thaliana OX=3702 GN=NFYA9 PE=1 SV=1)

HSP 1 Score: 188.7 bits (478), Expect = 1.1e-46
Identity = 158/350 (45.14%), Postives = 193/350 (55.14%), Query Frame = 0


Query: 1   MQSKSKS-VNQLESEPPNMQQTSSYS-EPWWR-SIGYNHISPPAAGGNVSNSTSLECTNG 60
           M SKS S  N+++SE      +S  S  PW R +   N  S   AG   S S +L     
Sbjct: 6   MHSKSDSGGNKVDSEVHGTVSSSINSLNPWHRAAAACNANSSVEAGDKSSKSIAL----- 65

Query: 61  ASESNDGQSMSNDD--LNEDDDDDTTKDSHASYGQVQHNCQHAVSAAPIVHGGCITQ-PP 120
           A ESN  +S SN D  +N++    T+  S   Y        H        HG  ITQ PP
Sbjct: 66  ALESNGSKSPSNRDNTVNKESQVTTSPQSAGDYSDKNQESLH--------HG--ITQPPP 125

Query: 121 QLELVGHSIACA-SNPYQDPYYAGVMAAYGHQP-GYPPFLGMPHARMALPLEVTQEPVFV 180
             +LVGH++  A SNPYQDPYYAGVM AYGH P G+ P+ GMPH+RM LP E+ QEPVFV
Sbjct: 126 HPQLVGHTVGWASSNPYQDPYYAGVMGAYGHHPLGFVPYGGMPHSRMPLPPEMAQEPVFV 185

Query: 181 NAKQYQGILRRRQARAKAEVENKLIKVRKPYLHESRHQHAMRRARGSGGRFAKKNEANSS 240
           NAKQYQ ILRRRQARAKAE+E KLIK RKPYLHESRHQHAMRR RG+GGRFAKK   N+ 
Sbjct: 186 NAKQYQAILRRRQARAKAELEKKLIKSRKPYLHESRHQHAMRRPRGTGGRFAKK--TNTE 245

Query: 241 GSTMKDKDSGSGQAISSHSAGSSGSEAAPCALAETWNSSNGQQEARTQLHEAYEARSYVN 300
            S  K ++  +G    S S+ +S          E W                       N
Sbjct: 246 ASKRKAEEKSNGHVTQSPSSSNSDQ-------GEAW-----------------------N 303

Query: 301 GSSQFHNYSSFQASSYGLRSGERGDDGDCSGQQ-RSISENQAAQRRLAIK 342
           G  +       Q+S+Y     +R ++G+CSGQQ  S+S N  +Q RLAIK
Sbjct: 306 GDYRTPQGDEMQSSAY-----KRREEGECSGQQWNSLSSNHPSQARLAIK 303

[Close]

BLAST of PI0001388 vs. ExPASy Swiss-Prot
Match: Q84JP1 (Nuclear transcription factor Y subunit A-7 OS=Arabidopsis thaliana OX=3702 GN=NFYA7 PE=1 SV=1)

HSP 1 Score: 105.5 bits (262), Expect = 1.2e-21
Identity = 65/140 (46.43%), Postives = 92/140 (65.71%), Query Frame = 0


Query: 121 HSIACASNPYQDPYYAGVMA--AYGHQPGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQ 180
           +S+A    PY DPYY  + A     +   +   +G+    + LP +  +EPVFVNAKQY 
Sbjct: 51  NSMAPGQYPYPDPYYRSIFAPPPQPYTGVHLQLMGVQQQGVPLPSDAVEEPVFVNAKQYH 110

Query: 181 GILRRRQARAKAEVENKLIKVRKPYLHESRHQHAMRRARGSGGRF--AKKNEANSSGSTM 240
           GILRRRQ+RA+ E +NK+IK RKPYLHESRH HA+RR RG GGRF  AKK + +   S+ 
Sbjct: 111 GILRRRQSRARLESQNKVIKSRKPYLHESRHLHAIRRPRGCGGRFLNAKKEDEHHEDSSH 170

Query: 241 KDKDS-GSGQAISSHSAGSS 256
           ++K +  +G++  + S+G+S
Sbjct: 171 EEKSNLSAGKSAMAASSGTS 190

[Close]

BLAST of PI0001388 vs. ExPASy Swiss-Prot
Match: Q8VY64 (Nuclear transcription factor Y subunit A-4 OS=Arabidopsis thaliana OX=3702 GN=NFYA4 PE=1 SV=1)

HSP 1 Score: 103.2 bits (256), Expect = 5.9e-21
Identity = 63/128 (49.22%), Postives = 76/128 (59.38%), Query Frame = 0


Query: 129 PYQDPYYAGVMAAYGHQP-GYP----PFLGMPHARMALPLEVTQEPVFVNAKQYQGILRR 188
           PY DPYY  V A   + P  YP      +GM    + L  +  +EPVFVNAKQY GILRR
Sbjct: 54  PYPDPYYRSVFAQQAYLPHPYPGVQLQLMGMQQPGVPLQCDAVEEPVFVNAKQYHGILRR 113

Query: 189 RQARAKAEVENKLIKVRKPYLHESRHQHAMRRARGSGGRF--AKKNEANSSGSTMKDKDS 248
           RQ+RAK E  N+ IK +KPY+HESRH HA+RR RG GGRF  AKK   +         D 
Sbjct: 114 RQSRAKLEARNRAIKAKKPYMHESRHLHAIRRPRGCGGRFLNAKKENGDHKEEEEATSDE 173

Query: 249 GSGQAISS 250
            + +A SS
Sbjct: 174 NTSEASSS 181

[Close]

BLAST of PI0001388 vs. ExPASy Swiss-Prot
Match: Q9LVJ7 (Nuclear transcription factor Y subunit A-6 OS=Arabidopsis thaliana OX=3702 GN=NFYA6 PE=1 SV=1)

HSP 1 Score: 103.2 bits (256), Expect = 5.9e-21
Identity = 60/107 (56.07%), Postives = 75/107 (70.09%), Query Frame = 0


Query: 133 PYYAGVMA---AYGHQPGYPPFLGMPHARMALPLEVTQ-EPVFVNAKQYQGILRRRQARA 192
           P++ G ++   A  H   +P   G+  +RM LP  + + EP+FVNAKQYQ ILRRR+ RA
Sbjct: 132 PHFNGFLSFPYASQHTVQHPQIRGLVPSRMPLPHNIPENEPIFVNAKQYQAILRRRERRA 191

Query: 193 KAEVENKLIKVRKPYLHESRHQHAMRRARGSGGRF---AKKNEANSS 233
           K E +NKLIKVRKPYLHESRH HA++R RGSGGRF    K  E+NSS
Sbjct: 192 KLEAQNKLIKVRKPYLHESRHLHALKRVRGSGGRFLNTKKHQESNSS 238

[Close]

BLAST of PI0001388 vs. ExPASy TrEMBL
Match: A0A1S3BNK4 (Nuclear transcription factor Y subunit OS=Cucumis melo OX=3656 GN=LOC103491506 PE=3 SV=1)

HSP 1 Score: 639.8 bits (1649), Expect = 6.5e-180
Identity = 335/341 (98.24%), Postives = 336/341 (98.53%), Query Frame = 0


Query: 1   MQSKSKSVNQLESEPPNMQQTSSYSEPWWRSIGYNHISPPAAGGNVSNSTSLECTNGASE 60
           MQSKSKSVNQ ESEPPNMQQTSSYSEPWWRSIGYNHISPPAAGGNVSNSTSLECTNGASE
Sbjct: 1   MQSKSKSVNQPESEPPNMQQTSSYSEPWWRSIGYNHISPPAAGGNVSNSTSLECTNGASE 60

Query: 61  SNDGQSMSNDDLNEDDDDDTTKDSHASYGQVQHNCQHAVSAAPIVHGGCITQPPQLELVG 120
           SNDGQSMSNDDLNEDDDDDTTKDSHASYGQVQ+NCQHAVSAAPIVH GCITQPPQLELVG
Sbjct: 61  SNDGQSMSNDDLNEDDDDDTTKDSHASYGQVQNNCQHAVSAAPIVHSGCITQPPQLELVG 120

Query: 121 HSIACASNPYQDPYYAGVMAAYGHQPGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGI 180
           HSIACASNPYQDPYYAGVMAAYGHQPGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGI
Sbjct: 121 HSIACASNPYQDPYYAGVMAAYGHQPGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGI 180

Query: 181 LRRRQARAKAEVENKLIKVRKPYLHESRHQHAMRRARGSGGRFAKKNEANSSGSTMKDKD 240
           LRRRQARAKAEVENKLIKVRKPYLHESRHQHAMRRARGSGGRFAKKNE NS GSTMKDKD
Sbjct: 181 LRRRQARAKAEVENKLIKVRKPYLHESRHQHAMRRARGSGGRFAKKNETNSLGSTMKDKD 240

Query: 241 SGSGQAISSHSAGSSGSEAAPCALAETWNSSNGQQEARTQLHEAYEARSYVNGSSQFHNY 300
           SGSGQAISSHSAGSSGSEAA CALAETWNSSNGQQEARTQLHEAYEARSYVNGSSQFHNY
Sbjct: 241 SGSGQAISSHSAGSSGSEAAHCALAETWNSSNGQQEARTQLHEAYEARSYVNGSSQFHNY 300

Query: 301 SSFQASSYGLRSGERGDDGDCSGQQRSISENQAAQRRLAIK 342
           SSFQASSYGLRSGERGDDGDCSGQQRSISENQAAQRRLAIK
Sbjct: 301 SSFQASSYGLRSGERGDDGDCSGQQRSISENQAAQRRLAIK 341

[Close]

BLAST of PI0001388 vs. ExPASy TrEMBL
Match: A0A0A0KEL9 (Nuclear transcription factor Y subunit OS=Cucumis sativus OX=3659 GN=Csa_6G439960 PE=3 SV=1)

HSP 1 Score: 639.0 bits (1647), Expect = 1.1e-179
Identity = 331/341 (97.07%), Postives = 338/341 (99.12%), Query Frame = 0


Query: 1   MQSKSKSVNQLESEPPNMQQTSSYSEPWWRSIGYNHISPPAAGGNVSNSTSLECTNGASE 60
           MQSKSKSVNQLESEPPNMQQTSS+SEPWWRSIGYNHISPPAAGGNVSNSTSLECTNGASE
Sbjct: 1   MQSKSKSVNQLESEPPNMQQTSSFSEPWWRSIGYNHISPPAAGGNVSNSTSLECTNGASE 60

Query: 61  SNDGQSMSNDDLNEDDDDDTTKDSHASYGQVQHNCQHAVSAAPIVHGGCITQPPQLELVG 120
           SNDGQSMSNDDLNE+DDD+TTKDSHAS+GQVQHNCQHAVSAAPIVH GCITQPPQLELVG
Sbjct: 61  SNDGQSMSNDDLNEEDDDETTKDSHASFGQVQHNCQHAVSAAPIVHSGCITQPPQLELVG 120

Query: 121 HSIACASNPYQDPYYAGVMAAYGHQPGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGI 180
           HSIACASNPYQDPYYAGVMAAYGHQPGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGI
Sbjct: 121 HSIACASNPYQDPYYAGVMAAYGHQPGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGI 180

Query: 181 LRRRQARAKAEVENKLIKVRKPYLHESRHQHAMRRARGSGGRFAKKNEANSSGSTMKDKD 240
           LRRRQARAKAEVENKLIKVRKPYLHESRHQHAMRRARGSGGRFAKKNE NS GSTMKDKD
Sbjct: 181 LRRRQARAKAEVENKLIKVRKPYLHESRHQHAMRRARGSGGRFAKKNETNSLGSTMKDKD 240

Query: 241 SGSGQAISSHSAGSSGSEAAPCALAETWNSSNGQQEARTQLHEAYEARSYVNGSSQFHNY 300
           SGSGQAISSHSAGSSGS+AAPCALAETWNSSNGQQE+RTQLHEAYEARSY+NGSSQFHNY
Sbjct: 241 SGSGQAISSHSAGSSGSDAAPCALAETWNSSNGQQESRTQLHEAYEARSYMNGSSQFHNY 300

Query: 301 SSFQASSYGLRSGERGDDGDCSGQQRSISENQAAQRRLAIK 342
           SSFQASSYGLRSGERGDDGDCSGQQRSISENQAAQRRLAIK
Sbjct: 301 SSFQASSYGLRSGERGDDGDCSGQQRSISENQAAQRRLAIK 341

[Close]

BLAST of PI0001388 vs. ExPASy TrEMBL
Match: A0A1S4DXQ9 (Nuclear transcription factor Y subunit OS=Cucumis melo OX=3656 GN=LOC103491506 PE=3 SV=1)

HSP 1 Score: 623.6 bits (1607), Expect = 4.8e-175
Identity = 330/341 (96.77%), Postives = 331/341 (97.07%), Query Frame = 0


Query: 1   MQSKSKSVNQLESEPPNMQQTSSYSEPWWRSIGYNHISPPAAGGNVSNSTSLECTNGASE 60
           MQSKSKSVNQ ESEPPNMQQTSSYSEPWWRSIGYNHISPPAAGGNVSNSTSLECTNGASE
Sbjct: 1   MQSKSKSVNQPESEPPNMQQTSSYSEPWWRSIGYNHISPPAAGGNVSNSTSLECTNGASE 60

Query: 61  SNDGQSMSNDDLNEDDDDDTTKDSHASYGQVQHNCQHAVSAAPIVHGGCITQPPQLELVG 120
           SNDGQSMSNDDLNEDDDDDTTKDSHASYGQVQ+NCQHAVSAAPIVH GCITQPPQLEL  
Sbjct: 61  SNDGQSMSNDDLNEDDDDDTTKDSHASYGQVQNNCQHAVSAAPIVHSGCITQPPQLEL-- 120

Query: 121 HSIACASNPYQDPYYAGVMAAYGHQPGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGI 180
              ACASNPYQDPYYAGVMAAYGHQPGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGI
Sbjct: 121 ---ACASNPYQDPYYAGVMAAYGHQPGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGI 180

Query: 181 LRRRQARAKAEVENKLIKVRKPYLHESRHQHAMRRARGSGGRFAKKNEANSSGSTMKDKD 240
           LRRRQARAKAEVENKLIKVRKPYLHESRHQHAMRRARGSGGRFAKKNE NS GSTMKDKD
Sbjct: 181 LRRRQARAKAEVENKLIKVRKPYLHESRHQHAMRRARGSGGRFAKKNETNSLGSTMKDKD 240

Query: 241 SGSGQAISSHSAGSSGSEAAPCALAETWNSSNGQQEARTQLHEAYEARSYVNGSSQFHNY 300
           SGSGQAISSHSAGSSGSEAA CALAETWNSSNGQQEARTQLHEAYEARSYVNGSSQFHNY
Sbjct: 241 SGSGQAISSHSAGSSGSEAAHCALAETWNSSNGQQEARTQLHEAYEARSYVNGSSQFHNY 300

Query: 301 SSFQASSYGLRSGERGDDGDCSGQQRSISENQAAQRRLAIK 342
           SSFQASSYGLRSGERGDDGDCSGQQRSISENQAAQRRLAIK
Sbjct: 301 SSFQASSYGLRSGERGDDGDCSGQQRSISENQAAQRRLAIK 336

[Close]

BLAST of PI0001388 vs. ExPASy TrEMBL
Match: A0A6J1JHB5 (Nuclear transcription factor Y subunit OS=Cucurbita maxima OX=3661 GN=LOC111484375 PE=3 SV=1)

HSP 1 Score: 612.1 bits (1577), Expect = 1.4e-171
Identity = 324/343 (94.46%), Postives = 330/343 (96.21%), Query Frame = 0


Query: 1   MQSKSKSVNQLESEPPNMQQTSSYSEPWWRSIGYNHISPPAAGGNVSNSTSLECTNGASE 60
           MQSK +SVNQLESEPPNMQQTSSYSEPWWRSIGYNHIS PAAGGN+SNSTSLEC NGASE
Sbjct: 1   MQSKPRSVNQLESEPPNMQQTSSYSEPWWRSIGYNHISSPAAGGNLSNSTSLECPNGASE 60

Query: 61  SNDGQSMSNDDLNEDDDDDTTKDSHA-SYGQVQHNCQHAVSAAPIVHGGCITQPPQLELV 120
           SNDG SMSNDDLNEDDDDDTTKDSHA SYGQVQ+NCQHAVSAAP VHGGCITQPPQLELV
Sbjct: 61  SNDGPSMSNDDLNEDDDDDTTKDSHAVSYGQVQNNCQHAVSAAPTVHGGCITQPPQLELV 120

Query: 121 GHSIACASNPYQDPYYAGVMAAYGHQPGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQG 180
           GHSIACASN YQDPYYAGVMAAYGHQPGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQG
Sbjct: 121 GHSIACASNLYQDPYYAGVMAAYGHQPGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQG 180

Query: 181 ILRRRQARAKAEVENKLIKVRKPYLHESRHQHAMRRARGSGGRFAKKNEANSSGSTMKDK 240
           ILRRRQARAKAEVENKLIK+RKPYLHESRHQHAMRRARGSGGRFAKKNE NSS ST+K+K
Sbjct: 181 ILRRRQARAKAEVENKLIKIRKPYLHESRHQHAMRRARGSGGRFAKKNEVNSSSSTVKNK 240

Query: 241 DSGSGQAISSHSAGSSGSEAAPCALAETWNSSNGQQEARTQLHEAYEARSYVNGSSQFHN 300
           DSGSGQA SSHSAGSSGSEAAPCALAETWNSSNGQQEARTQLHEAYEARSYVNGS QFHN
Sbjct: 241 DSGSGQAFSSHSAGSSGSEAAPCALAETWNSSNGQQEARTQLHEAYEARSYVNGSGQFHN 300

Query: 301 YSSFQASSYGLRSGERGDDGDCSGQQR-SISENQAAQRRLAIK 342
           YSSFQASSY LRSGERGDDGDCSGQQR SISENQAAQRRLAIK
Sbjct: 301 YSSFQASSYALRSGERGDDGDCSGQQRGSISENQAAQRRLAIK 343

[Close]

BLAST of PI0001388 vs. ExPASy TrEMBL
Match: A0A6J1FTP1 (Nuclear transcription factor Y subunit OS=Cucurbita moschata OX=3662 GN=LOC111448699 PE=3 SV=1)

HSP 1 Score: 608.2 bits (1567), Expect = 2.1e-170
Identity = 323/343 (94.17%), Postives = 329/343 (95.92%), Query Frame = 0


Query: 1   MQSKSKSVNQLESEPPNMQQTSSYSEPWWRSIGYNHISPPAAGGNVSNSTSLECTNGASE 60
           MQSK +SVNQLESEPPNMQQTSSYSEPWWRSIGYN ISPPAAGGN+SNSTSLEC NGASE
Sbjct: 1   MQSKPRSVNQLESEPPNMQQTSSYSEPWWRSIGYNQISPPAAGGNLSNSTSLECPNGASE 60

Query: 61  SNDGQSMSNDDLNEDDDDDTTKDSHA-SYGQVQHNCQHAVSAAPIVHGGCITQPPQLELV 120
           SNDG SMSNDDLNEDDDDDTTKDSHA SYGQVQ+N QHAVSAAP VHGGCITQPPQLELV
Sbjct: 61  SNDGPSMSNDDLNEDDDDDTTKDSHAVSYGQVQNNSQHAVSAAPTVHGGCITQPPQLELV 120

Query: 121 GHSIACASNPYQDPYYAGVMAAYGHQPGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQG 180
           GHSIACASN YQDPYYAGVMAAYGHQPGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQG
Sbjct: 121 GHSIACASNLYQDPYYAGVMAAYGHQPGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQG 180

Query: 181 ILRRRQARAKAEVENKLIKVRKPYLHESRHQHAMRRARGSGGRFAKKNEANSSGSTMKDK 240
           ILRRRQARAKAEVENKLIK+RKPYLHESRHQHAMRRARGSGGRFAKKNE NSS STMK+K
Sbjct: 181 ILRRRQARAKAEVENKLIKIRKPYLHESRHQHAMRRARGSGGRFAKKNEVNSSSSTMKNK 240

Query: 241 DSGSGQAISSHSAGSSGSEAAPCALAETWNSSNGQQEARTQLHEAYEARSYVNGSSQFHN 300
           DSGSGQA SSHSAGSSGSEAAPCALAETWNSSNGQQEARTQLHEAY+ARSYVNGS QFHN
Sbjct: 241 DSGSGQAFSSHSAGSSGSEAAPCALAETWNSSNGQQEARTQLHEAYKARSYVNGSEQFHN 300

Query: 301 YSSFQASSYGLRSGERGDDGDCSGQQR-SISENQAAQRRLAIK 342
           YSSFQASSY LRSGERGDDGDCSGQQR SISENQAAQRRLAIK
Sbjct: 301 YSSFQASSYALRSGERGDDGDCSGQQRGSISENQAAQRRLAIK 343

[Close]

BLAST of PI0001388 vs. NCBI nr
Match: XP_008449708.1 (PREDICTED: nuclear transcription factor Y subunit A-1-like isoform X1 [Cucumis melo] >XP_008449709.1 PREDICTED: nuclear transcription factor Y subunit A-1-like isoform X1 [Cucumis melo])

HSP 1 Score: 639.8 bits (1649), Expect = 1.3e-179
Identity = 335/341 (98.24%), Postives = 336/341 (98.53%), Query Frame = 0


Query: 1   MQSKSKSVNQLESEPPNMQQTSSYSEPWWRSIGYNHISPPAAGGNVSNSTSLECTNGASE 60
           MQSKSKSVNQ ESEPPNMQQTSSYSEPWWRSIGYNHISPPAAGGNVSNSTSLECTNGASE
Sbjct: 1   MQSKSKSVNQPESEPPNMQQTSSYSEPWWRSIGYNHISPPAAGGNVSNSTSLECTNGASE 60

Query: 61  SNDGQSMSNDDLNEDDDDDTTKDSHASYGQVQHNCQHAVSAAPIVHGGCITQPPQLELVG 120
           SNDGQSMSNDDLNEDDDDDTTKDSHASYGQVQ+NCQHAVSAAPIVH GCITQPPQLELVG
Sbjct: 61  SNDGQSMSNDDLNEDDDDDTTKDSHASYGQVQNNCQHAVSAAPIVHSGCITQPPQLELVG 120

Query: 121 HSIACASNPYQDPYYAGVMAAYGHQPGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGI 180
           HSIACASNPYQDPYYAGVMAAYGHQPGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGI
Sbjct: 121 HSIACASNPYQDPYYAGVMAAYGHQPGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGI 180

Query: 181 LRRRQARAKAEVENKLIKVRKPYLHESRHQHAMRRARGSGGRFAKKNEANSSGSTMKDKD 240
           LRRRQARAKAEVENKLIKVRKPYLHESRHQHAMRRARGSGGRFAKKNE NS GSTMKDKD
Sbjct: 181 LRRRQARAKAEVENKLIKVRKPYLHESRHQHAMRRARGSGGRFAKKNETNSLGSTMKDKD 240

Query: 241 SGSGQAISSHSAGSSGSEAAPCALAETWNSSNGQQEARTQLHEAYEARSYVNGSSQFHNY 300
           SGSGQAISSHSAGSSGSEAA CALAETWNSSNGQQEARTQLHEAYEARSYVNGSSQFHNY
Sbjct: 241 SGSGQAISSHSAGSSGSEAAHCALAETWNSSNGQQEARTQLHEAYEARSYVNGSSQFHNY 300

Query: 301 SSFQASSYGLRSGERGDDGDCSGQQRSISENQAAQRRLAIK 342
           SSFQASSYGLRSGERGDDGDCSGQQRSISENQAAQRRLAIK
Sbjct: 301 SSFQASSYGLRSGERGDDGDCSGQQRSISENQAAQRRLAIK 341

[Close]

BLAST of PI0001388 vs. NCBI nr
Match: XP_011657641.1 (nuclear transcription factor Y subunit A-1 isoform X1 [Cucumis sativus] >XP_011657642.1 nuclear transcription factor Y subunit A-1 isoform X1 [Cucumis sativus] >XP_031743004.1 nuclear transcription factor Y subunit A-1 isoform X1 [Cucumis sativus] >XP_031743005.1 nuclear transcription factor Y subunit A-1 isoform X1 [Cucumis sativus] >KGN48130.1 hypothetical protein Csa_003198 [Cucumis sativus])

HSP 1 Score: 639.0 bits (1647), Expect = 2.3e-179
Identity = 331/341 (97.07%), Postives = 338/341 (99.12%), Query Frame = 0


Query: 1   MQSKSKSVNQLESEPPNMQQTSSYSEPWWRSIGYNHISPPAAGGNVSNSTSLECTNGASE 60
           MQSKSKSVNQLESEPPNMQQTSS+SEPWWRSIGYNHISPPAAGGNVSNSTSLECTNGASE
Sbjct: 1   MQSKSKSVNQLESEPPNMQQTSSFSEPWWRSIGYNHISPPAAGGNVSNSTSLECTNGASE 60

Query: 61  SNDGQSMSNDDLNEDDDDDTTKDSHASYGQVQHNCQHAVSAAPIVHGGCITQPPQLELVG 120
           SNDGQSMSNDDLNE+DDD+TTKDSHAS+GQVQHNCQHAVSAAPIVH GCITQPPQLELVG
Sbjct: 61  SNDGQSMSNDDLNEEDDDETTKDSHASFGQVQHNCQHAVSAAPIVHSGCITQPPQLELVG 120

Query: 121 HSIACASNPYQDPYYAGVMAAYGHQPGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGI 180
           HSIACASNPYQDPYYAGVMAAYGHQPGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGI
Sbjct: 121 HSIACASNPYQDPYYAGVMAAYGHQPGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGI 180

Query: 181 LRRRQARAKAEVENKLIKVRKPYLHESRHQHAMRRARGSGGRFAKKNEANSSGSTMKDKD 240
           LRRRQARAKAEVENKLIKVRKPYLHESRHQHAMRRARGSGGRFAKKNE NS GSTMKDKD
Sbjct: 181 LRRRQARAKAEVENKLIKVRKPYLHESRHQHAMRRARGSGGRFAKKNETNSLGSTMKDKD 240

Query: 241 SGSGQAISSHSAGSSGSEAAPCALAETWNSSNGQQEARTQLHEAYEARSYVNGSSQFHNY 300
           SGSGQAISSHSAGSSGS+AAPCALAETWNSSNGQQE+RTQLHEAYEARSY+NGSSQFHNY
Sbjct: 241 SGSGQAISSHSAGSSGSDAAPCALAETWNSSNGQQESRTQLHEAYEARSYMNGSSQFHNY 300

Query: 301 SSFQASSYGLRSGERGDDGDCSGQQRSISENQAAQRRLAIK 342
           SSFQASSYGLRSGERGDDGDCSGQQRSISENQAAQRRLAIK
Sbjct: 301 SSFQASSYGLRSGERGDDGDCSGQQRSISENQAAQRRLAIK 341

[Close]

BLAST of PI0001388 vs. NCBI nr
Match: XP_008449711.1 (PREDICTED: nuclear transcription factor Y subunit A-1-like isoform X2 [Cucumis melo] >XP_016900766.1 PREDICTED: nuclear transcription factor Y subunit A-1-like isoform X2 [Cucumis melo])

HSP 1 Score: 623.6 bits (1607), Expect = 9.9e-175
Identity = 330/341 (96.77%), Postives = 331/341 (97.07%), Query Frame = 0


Query: 1   MQSKSKSVNQLESEPPNMQQTSSYSEPWWRSIGYNHISPPAAGGNVSNSTSLECTNGASE 60
           MQSKSKSVNQ ESEPPNMQQTSSYSEPWWRSIGYNHISPPAAGGNVSNSTSLECTNGASE
Sbjct: 1   MQSKSKSVNQPESEPPNMQQTSSYSEPWWRSIGYNHISPPAAGGNVSNSTSLECTNGASE 60

Query: 61  SNDGQSMSNDDLNEDDDDDTTKDSHASYGQVQHNCQHAVSAAPIVHGGCITQPPQLELVG 120
           SNDGQSMSNDDLNEDDDDDTTKDSHASYGQVQ+NCQHAVSAAPIVH GCITQPPQLEL  
Sbjct: 61  SNDGQSMSNDDLNEDDDDDTTKDSHASYGQVQNNCQHAVSAAPIVHSGCITQPPQLEL-- 120

Query: 121 HSIACASNPYQDPYYAGVMAAYGHQPGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGI 180
              ACASNPYQDPYYAGVMAAYGHQPGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGI
Sbjct: 121 ---ACASNPYQDPYYAGVMAAYGHQPGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGI 180

Query: 181 LRRRQARAKAEVENKLIKVRKPYLHESRHQHAMRRARGSGGRFAKKNEANSSGSTMKDKD 240
           LRRRQARAKAEVENKLIKVRKPYLHESRHQHAMRRARGSGGRFAKKNE NS GSTMKDKD
Sbjct: 181 LRRRQARAKAEVENKLIKVRKPYLHESRHQHAMRRARGSGGRFAKKNETNSLGSTMKDKD 240

Query: 241 SGSGQAISSHSAGSSGSEAAPCALAETWNSSNGQQEARTQLHEAYEARSYVNGSSQFHNY 300
           SGSGQAISSHSAGSSGSEAA CALAETWNSSNGQQEARTQLHEAYEARSYVNGSSQFHNY
Sbjct: 241 SGSGQAISSHSAGSSGSEAAHCALAETWNSSNGQQEARTQLHEAYEARSYVNGSSQFHNY 300

Query: 301 SSFQASSYGLRSGERGDDGDCSGQQRSISENQAAQRRLAIK 342
           SSFQASSYGLRSGERGDDGDCSGQQRSISENQAAQRRLAIK
Sbjct: 301 SSFQASSYGLRSGERGDDGDCSGQQRSISENQAAQRRLAIK 336

[Close]

BLAST of PI0001388 vs. NCBI nr
Match: XP_011657643.1 (nuclear transcription factor Y subunit A-1 isoform X2 [Cucumis sativus] >XP_011657644.1 nuclear transcription factor Y subunit A-1 isoform X2 [Cucumis sativus])

HSP 1 Score: 622.9 bits (1605), Expect = 1.7e-174
Identity = 326/341 (95.60%), Postives = 333/341 (97.65%), Query Frame = 0


Query: 1   MQSKSKSVNQLESEPPNMQQTSSYSEPWWRSIGYNHISPPAAGGNVSNSTSLECTNGASE 60
           MQSKSKSVNQLESEPPNMQQTSS+SEPWWRSIGYNHISPPAAGGNVSNSTSLECTNGASE
Sbjct: 1   MQSKSKSVNQLESEPPNMQQTSSFSEPWWRSIGYNHISPPAAGGNVSNSTSLECTNGASE 60

Query: 61  SNDGQSMSNDDLNEDDDDDTTKDSHASYGQVQHNCQHAVSAAPIVHGGCITQPPQLELVG 120
           SNDGQSMSNDDLNE+DDD+TTKDSHAS+GQVQHNCQHAVSAAPIVH GCITQPPQLEL  
Sbjct: 61  SNDGQSMSNDDLNEEDDDETTKDSHASFGQVQHNCQHAVSAAPIVHSGCITQPPQLEL-- 120

Query: 121 HSIACASNPYQDPYYAGVMAAYGHQPGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGI 180
              ACASNPYQDPYYAGVMAAYGHQPGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGI
Sbjct: 121 ---ACASNPYQDPYYAGVMAAYGHQPGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGI 180

Query: 181 LRRRQARAKAEVENKLIKVRKPYLHESRHQHAMRRARGSGGRFAKKNEANSSGSTMKDKD 240
           LRRRQARAKAEVENKLIKVRKPYLHESRHQHAMRRARGSGGRFAKKNE NS GSTMKDKD
Sbjct: 181 LRRRQARAKAEVENKLIKVRKPYLHESRHQHAMRRARGSGGRFAKKNETNSLGSTMKDKD 240

Query: 241 SGSGQAISSHSAGSSGSEAAPCALAETWNSSNGQQEARTQLHEAYEARSYVNGSSQFHNY 300
           SGSGQAISSHSAGSSGS+AAPCALAETWNSSNGQQE+RTQLHEAYEARSY+NGSSQFHNY
Sbjct: 241 SGSGQAISSHSAGSSGSDAAPCALAETWNSSNGQQESRTQLHEAYEARSYMNGSSQFHNY 300

Query: 301 SSFQASSYGLRSGERGDDGDCSGQQRSISENQAAQRRLAIK 342
           SSFQASSYGLRSGERGDDGDCSGQQRSISENQAAQRRLAIK
Sbjct: 301 SSFQASSYGLRSGERGDDGDCSGQQRSISENQAAQRRLAIK 336

[Close]

BLAST of PI0001388 vs. NCBI nr
Match: XP_038901586.1 (nuclear transcription factor Y subunit A-1-like isoform X1 [Benincasa hispida] >XP_038901587.1 nuclear transcription factor Y subunit A-1-like isoform X1 [Benincasa hispida] >XP_038901588.1 nuclear transcription factor Y subunit A-1-like isoform X1 [Benincasa hispida] >XP_038901589.1 nuclear transcription factor Y subunit A-1-like isoform X1 [Benincasa hispida])

HSP 1 Score: 621.7 bits (1602), Expect = 3.8e-174
Identity = 326/341 (95.60%), Postives = 331/341 (97.07%), Query Frame = 0


Query: 1   MQSKSKSVNQLESEPPNMQQTSSYSEPWWRSIGYNHISPPAAGGNVSNSTSLECTNGASE 60
           MQSKSKSVNQLESEPPNMQQTS Y+EPWWRSIGYNHISPP AGGN+SNSTSLECTNGASE
Sbjct: 1   MQSKSKSVNQLESEPPNMQQTSGYTEPWWRSIGYNHISPP-AGGNLSNSTSLECTNGASE 60

Query: 61  SNDGQSMSNDDLNEDDDDDTTKDSHASYGQVQHNCQHAVSAAPIVHGGCITQPPQLELVG 120
           SNDGQSMSNDDLNEDDDDDTTKDSHASYGQVQHNCQ AVSAAP VHGGC+TQPPQLELVG
Sbjct: 61  SNDGQSMSNDDLNEDDDDDTTKDSHASYGQVQHNCQLAVSAAPTVHGGCVTQPPQLELVG 120

Query: 121 HSIACASNPYQDPYYAGVMAAYGHQPGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGI 180
           HSIACASNPYQDPYYAGVMAAYGHQPGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGI
Sbjct: 121 HSIACASNPYQDPYYAGVMAAYGHQPGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGI 180

Query: 181 LRRRQARAKAEVENKLIKVRKPYLHESRHQHAMRRARGSGGRFAKKNEANSSGSTMKDKD 240
           LRRRQARAKAEVENKLIKVRKPYLHESRHQHAMRRARGSGGRFAKKNEANS  STMKDKD
Sbjct: 181 LRRRQARAKAEVENKLIKVRKPYLHESRHQHAMRRARGSGGRFAKKNEANSLSSTMKDKD 240

Query: 241 SGSGQAISSHSAGSSGSEAAPCALAETWNSSNGQQEARTQLHEAYEARSYVNGSSQFHNY 300
           S SGQAISSHSAGSSGSEAAPCALAETWNSS+GQQEARTQLHEAYEARSYVN  SQFHNY
Sbjct: 241 SASGQAISSHSAGSSGSEAAPCALAETWNSSSGQQEARTQLHEAYEARSYVNHGSQFHNY 300

Query: 301 SSFQASSYGLRSGERGDDGDCSGQQRSISENQAAQRRLAIK 342
           SSFQASSYGLRSGERG+DGDCSGQQRSISENQA QRRLAIK
Sbjct: 301 SSFQASSYGLRSGERGEDGDCSGQQRSISENQAGQRRLAIK 340

[Close]

BLAST of PI0001388 vs. TAIR 10
Match: AT5G12840.2 (nuclear factor Y, subunit A1 )

HSP 1 Score: 209.1 bits (531), Expect = 5.4e-54
Identity = 141/277 (50.90%), Postives = 173/277 (62.45%), Query Frame = 0


Query: 1   MQSKSKSVNQLE-SEPPNMQQTSSYSEPWWRSIGYNHISPPAAGGNVSNSTSLECTNGAS 60
           MQSK    N+ E +    +QQ   Y+EPWW++  +  +      G  SNS+SL+C NG S
Sbjct: 1   MQSKPGRENEEEVNNHHAVQQPMMYAEPWWKNNSFGVVPQARPSGIPSNSSSLDCPNG-S 60

Query: 61  ESNDGQSMSNDDLNEDDDDDTTKDSHA--SYGQVQHNCQHAVSAAPI--VHGGCITQPPQ 120
           ESND  S S D     ++D T KDS A  S     H  +    A  I  +H   + QPP 
Sbjct: 61  ESNDVHSASEDGALNGENDGTWKDSQAATSSRSDNHGMEGNDPALSIRNMHDQPLVQPP- 120

Query: 121 LELVGHSIACASNPYQDPYYAGVMAAYGHQP-GYPPFLGMPHARMALPLEVTQEPVFVNA 180
            ELVGH IAC  NPYQDPYY G+M AYGHQ  G+ P+LGMP  R ALPL++ QEPV+VNA
Sbjct: 121 -ELVGHYIACVPNPYQDPYYGGLMGAYGHQQLGFRPYLGMPRERTALPLDMAQEPVYVNA 180

Query: 181 KQYQGILRRRQARAKAEVENKLIKVRKPYLHESRHQHAMRRARGSGGRFAKKNEANSSGS 240
           KQY+GILRRR+ARAKAE+E K+I+ RKPYLHESRH+HAMRRAR SGGRFAKK+E  +   
Sbjct: 181 KQYEGILRRRKARAKAELERKVIRDRKPYLHESRHKHAMRRARASGGRFAKKSEVEAG-- 240

Query: 241 TMKDKDSGSGQAISSHSAGSSGSEAAPCALAETWNSS 272
               +D+G        +  SSGSE       ET NSS
Sbjct: 241 ----EDAGGRDRERGSATNSSGSEQVETDSNETLNSS 268

[Close]

BLAST of PI0001388 vs. TAIR 10
Match: AT5G12840.4 (nuclear factor Y, subunit A1 )

HSP 1 Score: 209.1 bits (531), Expect = 5.4e-54
Identity = 141/277 (50.90%), Postives = 173/277 (62.45%), Query Frame = 0


Query: 1   MQSKSKSVNQLE-SEPPNMQQTSSYSEPWWRSIGYNHISPPAAGGNVSNSTSLECTNGAS 60
           MQSK    N+ E +    +QQ   Y+EPWW++  +  +      G  SNS+SL+C NG S
Sbjct: 1   MQSKPGRENEEEVNNHHAVQQPMMYAEPWWKNNSFGVVPQARPSGIPSNSSSLDCPNG-S 60

Query: 61  ESNDGQSMSNDDLNEDDDDDTTKDSHA--SYGQVQHNCQHAVSAAPI--VHGGCITQPPQ 120
           ESND  S S D     ++D T KDS A  S     H  +    A  I  +H   + QPP 
Sbjct: 61  ESNDVHSASEDGALNGENDGTWKDSQAATSSRSDNHGMEGNDPALSIRNMHDQPLVQPP- 120

Query: 121 LELVGHSIACASNPYQDPYYAGVMAAYGHQP-GYPPFLGMPHARMALPLEVTQEPVFVNA 180
            ELVGH IAC  NPYQDPYY G+M AYGHQ  G+ P+LGMP  R ALPL++ QEPV+VNA
Sbjct: 121 -ELVGHYIACVPNPYQDPYYGGLMGAYGHQQLGFRPYLGMPRERTALPLDMAQEPVYVNA 180

Query: 181 KQYQGILRRRQARAKAEVENKLIKVRKPYLHESRHQHAMRRARGSGGRFAKKNEANSSGS 240
           KQY+GILRRR+ARAKAE+E K+I+ RKPYLHESRH+HAMRRAR SGGRFAKK+E  +   
Sbjct: 181 KQYEGILRRRKARAKAELERKVIRDRKPYLHESRHKHAMRRARASGGRFAKKSEVEAG-- 240

Query: 241 TMKDKDSGSGQAISSHSAGSSGSEAAPCALAETWNSS 272
               +D+G        +  SSGSE       ET NSS
Sbjct: 241 ----EDAGGRDRERGSATNSSGSEQVETDSNETLNSS 268

[Close]

BLAST of PI0001388 vs. TAIR 10
Match: AT5G12840.1 (nuclear factor Y, subunit A1 )

HSP 1 Score: 208.8 bits (530), Expect = 7.1e-54
Identity = 141/278 (50.72%), Postives = 173/278 (62.23%), Query Frame = 0


Query: 1   MQSKSKSVNQLE-SEPPNMQQTSSYSEPWWRSIGYNHISPPAAGGNVSNSTSLECTNGAS 60
           MQSK    N+ E +    +QQ   Y+EPWW++  +  +      G  SNS+SL+C NG S
Sbjct: 1   MQSKPGRENEEEVNNHHAVQQPMMYAEPWWKNNSFGVVPQARPSGIPSNSSSLDCPNG-S 60

Query: 61  ESNDGQSMSNDDLNEDDDDDTTKDSHA---SYGQVQHNCQHAVSAAPI--VHGGCITQPP 120
           ESND  S S D     ++D T KDS A   S     H  +    A  I  +H   + QPP
Sbjct: 61  ESNDVHSASEDGALNGENDGTWKDSQAATSSRSVDNHGMEGNDPALSIRNMHDQPLVQPP 120

Query: 121 QLELVGHSIACASNPYQDPYYAGVMAAYGHQP-GYPPFLGMPHARMALPLEVTQEPVFVN 180
             ELVGH IAC  NPYQDPYY G+M AYGHQ  G+ P+LGMP  R ALPL++ QEPV+VN
Sbjct: 121 --ELVGHYIACVPNPYQDPYYGGLMGAYGHQQLGFRPYLGMPRERTALPLDMAQEPVYVN 180

Query: 181 AKQYQGILRRRQARAKAEVENKLIKVRKPYLHESRHQHAMRRARGSGGRFAKKNEANSSG 240
           AKQY+GILRRR+ARAKAE+E K+I+ RKPYLHESRH+HAMRRAR SGGRFAKK+E  +  
Sbjct: 181 AKQYEGILRRRKARAKAELERKVIRDRKPYLHESRHKHAMRRARASGGRFAKKSEVEAG- 240

Query: 241 STMKDKDSGSGQAISSHSAGSSGSEAAPCALAETWNSS 272
                +D+G        +  SSGSE       ET NSS
Sbjct: 241 -----EDAGGRDRERGSATNSSGSEQVETDSNETLNSS 269

[Close]

BLAST of PI0001388 vs. TAIR 10
Match: AT5G12840.3 (nuclear factor Y, subunit A1 )

HSP 1 Score: 208.8 bits (530), Expect = 7.1e-54
Identity = 141/278 (50.72%), Postives = 173/278 (62.23%), Query Frame = 0


Query: 1   MQSKSKSVNQLE-SEPPNMQQTSSYSEPWWRSIGYNHISPPAAGGNVSNSTSLECTNGAS 60
           MQSK    N+ E +    +QQ   Y+EPWW++  +  +      G  SNS+SL+C NG S
Sbjct: 1   MQSKPGRENEEEVNNHHAVQQPMMYAEPWWKNNSFGVVPQARPSGIPSNSSSLDCPNG-S 60

Query: 61  ESNDGQSMSNDDLNEDDDDDTTKDSHA---SYGQVQHNCQHAVSAAPI--VHGGCITQPP 120
           ESND  S S D     ++D T KDS A   S     H  +    A  I  +H   + QPP
Sbjct: 61  ESNDVHSASEDGALNGENDGTWKDSQAATSSRSVDNHGMEGNDPALSIRNMHDQPLVQPP 120

Query: 121 QLELVGHSIACASNPYQDPYYAGVMAAYGHQP-GYPPFLGMPHARMALPLEVTQEPVFVN 180
             ELVGH IAC  NPYQDPYY G+M AYGHQ  G+ P+LGMP  R ALPL++ QEPV+VN
Sbjct: 121 --ELVGHYIACVPNPYQDPYYGGLMGAYGHQQLGFRPYLGMPRERTALPLDMAQEPVYVN 180

Query: 181 AKQYQGILRRRQARAKAEVENKLIKVRKPYLHESRHQHAMRRARGSGGRFAKKNEANSSG 240
           AKQY+GILRRR+ARAKAE+E K+I+ RKPYLHESRH+HAMRRAR SGGRFAKK+E  +  
Sbjct: 181 AKQYEGILRRRKARAKAELERKVIRDRKPYLHESRHKHAMRRARASGGRFAKKSEVEAG- 240

Query: 241 STMKDKDSGSGQAISSHSAGSSGSEAAPCALAETWNSS 272
                +D+G        +  SSGSE       ET NSS
Sbjct: 241 -----EDAGGRDRERGSATNSSGSEQVETDSNETLNSS 269

[Close]

BLAST of PI0001388 vs. TAIR 10
Match: AT3G20910.1 (nuclear factor Y, subunit A9 )

HSP 1 Score: 188.7 bits (478), Expect = 7.6e-48
Identity = 158/350 (45.14%), Postives = 193/350 (55.14%), Query Frame = 0


Query: 1   MQSKSKS-VNQLESEPPNMQQTSSYS-EPWWR-SIGYNHISPPAAGGNVSNSTSLECTNG 60
           M SKS S  N+++SE      +S  S  PW R +   N  S   AG   S S +L     
Sbjct: 6   MHSKSDSGGNKVDSEVHGTVSSSINSLNPWHRAAAACNANSSVEAGDKSSKSIAL----- 65

Query: 61  ASESNDGQSMSNDD--LNEDDDDDTTKDSHASYGQVQHNCQHAVSAAPIVHGGCITQ-PP 120
           A ESN  +S SN D  +N++    T+  S   Y        H        HG  ITQ PP
Sbjct: 66  ALESNGSKSPSNRDNTVNKESQVTTSPQSAGDYSDKNQESLH--------HG--ITQPPP 125

Query: 121 QLELVGHSIACA-SNPYQDPYYAGVMAAYGHQP-GYPPFLGMPHARMALPLEVTQEPVFV 180
             +LVGH++  A SNPYQDPYYAGVM AYGH P G+ P+ GMPH+RM LP E+ QEPVFV
Sbjct: 126 HPQLVGHTVGWASSNPYQDPYYAGVMGAYGHHPLGFVPYGGMPHSRMPLPPEMAQEPVFV 185

Query: 181 NAKQYQGILRRRQARAKAEVENKLIKVRKPYLHESRHQHAMRRARGSGGRFAKKNEANSS 240
           NAKQYQ ILRRRQARAKAE+E KLIK RKPYLHESRHQHAMRR RG+GGRFAKK   N+ 
Sbjct: 186 NAKQYQAILRRRQARAKAELEKKLIKSRKPYLHESRHQHAMRRPRGTGGRFAKK--TNTE 245

Query: 241 GSTMKDKDSGSGQAISSHSAGSSGSEAAPCALAETWNSSNGQQEARTQLHEAYEARSYVN 300
            S  K ++  +G    S S+ +S          E W                       N
Sbjct: 246 ASKRKAEEKSNGHVTQSPSSSNSDQ-------GEAW-----------------------N 303

Query: 301 GSSQFHNYSSFQASSYGLRSGERGDDGDCSGQQ-RSISENQAAQRRLAIK 342
           G  +       Q+S+Y     +R ++G+CSGQQ  S+S N  +Q RLAIK
Sbjct: 306 GDYRTPQGDEMQSSAY-----KRREEGECSGQQWNSLSSNHPSQARLAIK 303

The following BLAST results are available for this feature:

BLAST of PI0001388 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LXV5	1.0e-52	50.72	Nuclear transcription factor Y subunit A-1 OS=Arabidopsis thaliana OX=3702 GN=NF...	[more]
Q945M9	1.1e-46	45.14	Nuclear transcription factor Y subunit A-9 OS=Arabidopsis thaliana OX=3702 GN=NF...	[more]
Q84JP1	1.2e-21	46.43	Nuclear transcription factor Y subunit A-7 OS=Arabidopsis thaliana OX=3702 GN=NF...	[more]
Q8VY64	5.9e-21	49.22	Nuclear transcription factor Y subunit A-4 OS=Arabidopsis thaliana OX=3702 GN=NF...	[more]
Q9LVJ7	5.9e-21	56.07	Nuclear transcription factor Y subunit A-6 OS=Arabidopsis thaliana OX=3702 GN=NF...	[more]

BLAST of PI0001388 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3BNK4	6.5e-180	98.24	Nuclear transcription factor Y subunit OS=Cucumis melo OX=3656 GN=LOC103491506 P...	[more]
A0A0A0KEL9	1.1e-179	97.07	Nuclear transcription factor Y subunit OS=Cucumis sativus OX=3659 GN=Csa_6G43996...	[more]
A0A1S4DXQ9	4.8e-175	96.77	Nuclear transcription factor Y subunit OS=Cucumis melo OX=3656 GN=LOC103491506 P...	[more]
A0A6J1JHB5	1.4e-171	94.46	Nuclear transcription factor Y subunit OS=Cucurbita maxima OX=3661 GN=LOC1114843...	[more]
A0A6J1FTP1	2.1e-170	94.17	Nuclear transcription factor Y subunit OS=Cucurbita moschata OX=3662 GN=LOC11144...	[more]

BLAST of PI0001388 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008449708.1	1.3e-179	98.24	PREDICTED: nuclear transcription factor Y subunit A-1-like isoform X1 [Cucumis m...	[more]
XP_011657641.1	2.3e-179	97.07	nuclear transcription factor Y subunit A-1 isoform X1 [Cucumis sativus] >XP_0116...	[more]
XP_008449711.1	9.9e-175	96.77	PREDICTED: nuclear transcription factor Y subunit A-1-like isoform X2 [Cucumis m...	[more]
XP_011657643.1	1.7e-174	95.60	nuclear transcription factor Y subunit A-1 isoform X2 [Cucumis sativus] >XP_0116...	[more]
XP_038901586.1	3.8e-174	95.60	nuclear transcription factor Y subunit A-1-like isoform X1 [Benincasa hispida] >...	[more]

BLAST of PI0001388 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G12840.2	5.4e-54	50.90	nuclear factor Y, subunit A1	[more]
AT5G12840.4	5.4e-54	50.90	nuclear factor Y, subunit A1	[more]
AT5G12840.1	7.1e-54	50.72	nuclear factor Y, subunit A1	[more]
AT5G12840.3	7.1e-54	50.72	nuclear factor Y, subunit A1	[more]
AT3G20910.1	7.6e-48	45.14	nuclear factor Y, subunit A9	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001289	Nuclear transcription factor Y subunit A	PRINTS	PR00616	CCAATSUBUNTB	coord: 169..191 score: 74.15 coord: 200..223 score: 81.94
IPR001289	Nuclear transcription factor Y subunit A	SMART	SM00521	cbf3	coord: 165..226 e-value: 2.3E-35 score: 133.5
IPR001289	Nuclear transcription factor Y subunit A	PFAM	PF02045	CBFB_NFYA	coord: 168..223 e-value: 1.9E-26 score: 92.4
IPR001289	Nuclear transcription factor Y subunit A	PANTHER	PTHR12632	TRANSCRIPTION FACTOR NF-Y ALPHA-RELATED	coord: 31..328
IPR001289	Nuclear transcription factor Y subunit A	PROSITE	PS51152	NFYA_HAP2_2	coord: 166..226 score: 36.156738
None	No IPR available	GENE3D	6.10.250.2430		coord: 166..228 e-value: 3.0E-30 score: 106.6
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..29
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 204..260
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..86
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 41..68
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 307..341
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 204..220
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 225..256
None	No IPR available	PANTHER	PTHR12632:SF59	NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT A-9	coord: 31..328
IPR018362	CCAAT-binding factor, conserved site	PROSITE	PS00686	NFYA_HAP2_1	coord: 171..191

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0001388.1	PI0001388.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006357	regulation of transcription by RNA polymerase II
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0016602	CCAAT-binding factor complex
molecular_function	GO:0000981	DNA-binding transcription factor activity, RNA polymerase II-specific
molecular_function	GO:0000978	RNA polymerase II cis-regulatory region sequence-specific DNA binding
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	DNA-binding transcription factor activity