PI0001325 (gene) Melon (PI 482460) v1

Overview


Name	PI0001325
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	Retrovirus-related Pol polyprotein from transposon TNT 1-94
Location	chr04: 17233531 .. 17235226 (-)
RNA-Seq Expression	PI0001325
Synteny	PI0001325

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTGGCAGGCTGCAGAAAAATACCTGCCATCAGGTAAGTTTTGCTCTTTATTAAATGGAAATGGTGGATCAAAATGAAAGTTTAATGGAATTTAATTGTAGTAAGCTTCGAAATAACAAAAAAGATGGTTGTTGGACATTCTCATAAACGTTACCAAACCCAAACTTATTCAAAATCCATTCAAACAATTAAAGATGAATTAAAATATTTAAAAAAAGATAAGAAAATTTGACCCAATTTGGGTTATTTGGTAAAGTATGGTGCTTTTGTTGTTGTTTCTGCATGATTAATAGCAAATTTTAAAAAATTATGTCATTTACTCTATTGCCATAATTAGACTTAATTTTGGTTAATATTATTCTTGTACTTCTTAGCAATCTTTCCTTAAGTTGCTATCACATTTTGTATAATTAAACATGTATCTCTTGAAAATATAAAAAATATTCAATAAAAGTCACATGGTATTAGAGCTCCAATTAAATTAGGGTTTTTCTGCAATTTTTCCTCAAAGAAAATTTGTCGCAGTCCCTTAGTTAATCACGTCTGCCGTCCGTCGACACTCATCTCTGACGATGTCCGTCACAAACCTTTCCCGTTCGACGTCGTTCCAAATCCAGCCTCGCTGCTCAGAAACACAGAAACTCATTTCTATTCCAGATCCGTTCTGACGCTGTGAAATCCATATCCGCTTCCAAATTGCGTTCCAGATTCGTCCACTACGACCCTCACTCCTGAAACCCACTTTCAGATCGTGACTTTCCAGCTCTCCTCCGCCTCTGTGTCGAACGATTTCATCGTTCCAGATCTTCGACACCATCGCTCCAGATCTTTGATTCCATCGTTCCAAATTTCATTGCCTTTCTTTGTTCCAGACTTCTTTTACTCTGTCATTCTCACGTTGTTTCGAGGTCAATCGCTCAAATCCGTTACTTTAATCCATATTTGTGTTTGTGATTTGTGATTTCTGTGTAGATGGAGAAAAATGACATTGTCCGTCCTATTACCACCATTCTTGACGGCTCGAATTACATCACTTGGGCTCACCAAATAAGGAGTTTTTTTATCGGTCGAAAGTTATGACATATAGTTACTGGAGATATCACCAAACCTATCAAACCCACTCCTCCTAGGAAAAACATCAGTCAGGACACCATTGAGAATGTTGATGCAAACCTTTCTGATGTCACTATTCACGAGACTACTGCAGAAGACGTCAAGTACATTGAAAAACTTAAGGATTGGGATAGCAAAAATCATCAAATCATCACTTGGTTGGGTAACACTTCTATTTTGGCTATTCATACTCAATTTGATGCATTTGATACTGCAAAAGAACTTTGGGATTTTCTGTTCATACATTTTCAGTCTATTGGGCTTGCTCATTATTATCAATTACATTCTCGACTTGTTAGTCTAAACCAGGAGGTCGGACAATCTGTGAATGAATATTTTGCTACTTTTCAGCCTATTTGGACTCAGTTAGACCATGCAAAAATCAGCTCTGACCATATTCGCCTCATCAAAGTCCTCATGGGACTCCGTCCAGAGTATAAATCAGTTTGTGCTGCTCTGTTACATTGCAACCCTTTGCCATCTCTCGACGCTGTCATTCAGGAGATTTTATTTGAGGAGAAAAGACTTGGCAATGTCTTCTCTCTGCCATCTGATGTCGCTCTTGCAACCACTCATCCATGA

mRNA sequence

ATGTGGCAGGCTGCAGAAAAATACCTGCCATCAGATTCGTCCACTACGACCCTCACTCCTGAAACCCACTTTCAGATCGTGACTTTCCAGCTCTCCTCCGCCTCTGTGTCGAACGATTTCATCGTTCCAGATCTTCGACACCATCGCTCCAGATCTTTGATTCCATCGTTCCAAATTTCATTGCCTTTCTTTGTTCCAGACTTCTTTTACTCTGTCATTCTCACGTTGTTTCGAGTTACTGGAGATATCACCAAACCTATCAAACCCACTCCTCCTAGGAAAAACATCAGTCAGGACACCATTGAGAATGTTGATGCAAACCTTTCTGATGTCACTATTCACGAGACTACTGCAGAAGACGTCAAGTACATTGAAAAACTTAAGGATTGGGATAGCAAAAATCATCAAATCATCACTTGGTTGGGTAACACTTCTATTTTGGCTATTCATACTCAATTTGATGCATTTGATACTGCAAAAGAACTTTGGGATTTTCTGTTCATACATTTTCAGTCTATTGGGCTTGCTCATTATTATCAATTACATTCTCGACTTGTTAGTCTAAACCAGGAGGTCGGACAATCTGTGAATGAATATTTTGCTACTTTTCAGCCTATTTGGACTCAGTTAGACCATGCAAAAATCAGCTCTGACCATATTCGCCTCATCAAAGTCCTCATGGGACTCCGTCCAGAGTATAAATCAGTTTGTGCTGCTCTGTTACATTGCAACCCTTTGCCATCTCTCGACGCTGTCATTCAGGAGATTTTATTTGAGGAGAAAAGACTTGGCAATGTCTTCTCTCTGCCATCTGATGTCGCTCTTGCAACCACTCATCCATGA

Coding sequence (CDS)

ATGTGGCAGGCTGCAGAAAAATACCTGCCATCAGATTCGTCCACTACGACCCTCACTCCTGAAACCCACTTTCAGATCGTGACTTTCCAGCTCTCCTCCGCCTCTGTGTCGAACGATTTCATCGTTCCAGATCTTCGACACCATCGCTCCAGATCTTTGATTCCATCGTTCCAAATTTCATTGCCTTTCTTTGTTCCAGACTTCTTTTACTCTGTCATTCTCACGTTGTTTCGAGTTACTGGAGATATCACCAAACCTATCAAACCCACTCCTCCTAGGAAAAACATCAGTCAGGACACCATTGAGAATGTTGATGCAAACCTTTCTGATGTCACTATTCACGAGACTACTGCAGAAGACGTCAAGTACATTGAAAAACTTAAGGATTGGGATAGCAAAAATCATCAAATCATCACTTGGTTGGGTAACACTTCTATTTTGGCTATTCATACTCAATTTGATGCATTTGATACTGCAAAAGAACTTTGGGATTTTCTGTTCATACATTTTCAGTCTATTGGGCTTGCTCATTATTATCAATTACATTCTCGACTTGTTAGTCTAAACCAGGAGGTCGGACAATCTGTGAATGAATATTTTGCTACTTTTCAGCCTATTTGGACTCAGTTAGACCATGCAAAAATCAGCTCTGACCATATTCGCCTCATCAAAGTCCTCATGGGACTCCGTCCAGAGTATAAATCAGTTTGTGCTGCTCTGTTACATTGCAACCCTTTGCCATCTCTCGACGCTGTCATTCAGGAGATTTTATTTGAGGAGAAAAGACTTGGCAATGTCTTCTCTCTGCCATCTGATGTCGCTCTTGCAACCACTCATCCATGA

Protein sequence

MWQAAEKYLPSDSSTTTLTPETHFQIVTFQLSSASVSNDFIVPDLRHHRSRSLIPSFQISLPFFVPDFFYSVILTLFRVTGDITKPIKPTPPRKNISQDTIENVDANLSDVTIHETTAEDVKYIEKLKDWDSKNHQIITWLGNTSILAIHTQFDAFDTAKELWDFLFIHFQSIGLAHYYQLHSRLVSLNQEVGQSVNEYFATFQPIWTQLDHAKISSDHIRLIKVLMGLRPEYKSVCAALLHCNPLPSLDAVIQEILFEEKRLGNVFSLPSDVALATTHP

Homology

[Close]

BLAST of PI0001325 vs. ExPASy TrEMBL
Match: A0A5A7TXR0 (Putative mitochondrial protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold133G00330 PE=4 SV=1)

HSP 1 Score: 328.2 bits (840), Expect = 3.4e-86
Identity = 160/201 (79.60%), Postives = 176/201 (87.56%), Query Frame = 0


Query: 79  VTGDITKPIKPTPPRKNISQDTIENVDANLSDVTIHETTAEDVKYIEKLKDWDSKNHQII 138
           VTGDITKP+KPT P KN S++  E+ DAN SD+ +HE T ED++YIE+L+DWDSKNHQII
Sbjct: 39  VTGDITKPVKPTFPMKNTSKNNTEHNDANTSDIIVHEPTVEDIQYIERLEDWDSKNHQII 98

Query: 139 TWLGNTSILAIHTQFDAFDTAKELWDFLFIHFQSIGLAHYYQLHSRLVSLNQEVGQSVNE 198
           TWLGNTSI AIHTQFD FD+AKELW+FL+  FQSIGLAHYYQLHS LV+LNQEVGQSVNE
Sbjct: 99  TWLGNTSIPAIHTQFDTFDSAKELWNFLYTRFQSIGLAHYYQLHSTLVNLNQEVGQSVNE 158

Query: 199 YFATFQPIWTQLDHAKISSDHIRLIKVLMGLRPEYKSVCAALLHCNPLPSLDAVIQEILF 258
           Y  TFQPIWTQLD AKIS DHIRLIKVLMGLR EY+SV AALLH NPLPSLDA +QEILF
Sbjct: 159 YLVTFQPIWTQLDQAKISPDHIRLIKVLMGLRSEYESVRAALLHRNPLPSLDAAVQEILF 218

Query: 259 EEKRLGNVFSLPSDVALATTH 280
           EEKRLG V SLPSDVALATTH
Sbjct: 219 EEKRLGIVSSLPSDVALATTH 239

[Close]

BLAST of PI0001325 vs. ExPASy TrEMBL
Match: A0A1S4E0Y9 (uncharacterized protein LOC107991463 OS=Cucumis melo OX=3656 GN=LOC107991463 PE=4 SV=1)

HSP 1 Score: 319.3 bits (817), Expect = 1.6e-83
Identity = 160/201 (79.60%), Postives = 172/201 (85.57%), Query Frame = 0


Query: 79  VTGDITKPIKPTPPRKNISQDTIENVDANLSDVTIHETTAEDVKYIEKLKDWDSKNHQII 138
           VTGDITKPIKPT P KNI         AN SDV IHETTAED+KYIE+L+DWDSKNHQII
Sbjct: 39  VTGDITKPIKPTTPMKNIDN------TANTSDVLIHETTAEDIKYIERLEDWDSKNHQII 98

Query: 139 TWLGNTSILAIHTQFDAFDTAKELWDFLFIHFQSIGLAHYYQLHSRLVSLNQEVGQSVNE 198
           TWLGNTSI AIHTQ D+FDTAKELWDFL   FQSIGLAHYYQL+S L++LNQEVGQSVNE
Sbjct: 99  TWLGNTSIPAIHTQLDSFDTAKELWDFLATRFQSIGLAHYYQLYSTLINLNQEVGQSVNE 158

Query: 199 YFATFQPIWTQLDHAKISSDHIRLIKVLMGLRPEYKSVCAALLHCNPLPSLDAVIQEILF 258
           Y AT QPIWTQLD  KI+ DHIRLIKVLMGLRPEY+SV AALLH NPLPSLDA +QEILF
Sbjct: 159 YLATLQPIWTQLDQTKINPDHIRLIKVLMGLRPEYESVRAALLHRNPLPSLDAAVQEILF 218

Query: 259 EEKRLGNVFSLPSDVALATTH 280
           EEKRLG V +LPSDVALATT+
Sbjct: 219 EEKRLGIVSALPSDVALATTY 233

[Close]

BLAST of PI0001325 vs. ExPASy TrEMBL
Match: A0A5D3CPU5 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold832G00700 PE=4 SV=1)

HSP 1 Score: 315.8 bits (808), Expect = 1.8e-82
Identity = 158/199 (79.40%), Postives = 170/199 (85.43%), Query Frame = 0


Query: 81  GDITKPIKPTPPRKNISQDTIENVDANLSDVTIHETTAEDVKYIEKLKDWDSKNHQIITW 140
           GDITKPIKPT P KNI         AN SDV IHETTAED+KYIE+L+DWDSKNHQIITW
Sbjct: 16  GDITKPIKPTTPMKNIDN------TANTSDVLIHETTAEDIKYIERLEDWDSKNHQIITW 75

Query: 141 LGNTSILAIHTQFDAFDTAKELWDFLFIHFQSIGLAHYYQLHSRLVSLNQEVGQSVNEYF 200
           LGNTSI AIHTQ D+FDTAKELWDFL   FQSIGLAHYYQL+S L++LNQEVGQSVNEY 
Sbjct: 76  LGNTSIPAIHTQLDSFDTAKELWDFLATRFQSIGLAHYYQLYSTLINLNQEVGQSVNEYL 135

Query: 201 ATFQPIWTQLDHAKISSDHIRLIKVLMGLRPEYKSVCAALLHCNPLPSLDAVIQEILFEE 260
           AT QPIWTQLD  KI+ DHIRLIKVLMGLRPEY+SV AALLH NPLPSLDA +QEILFEE
Sbjct: 136 ATLQPIWTQLDQTKINPDHIRLIKVLMGLRPEYESVRAALLHRNPLPSLDAAVQEILFEE 195

Query: 261 KRLGNVFSLPSDVALATTH 280
           KRLG V +LPSDVALATT+
Sbjct: 196 KRLGIVSALPSDVALATTY 208

[Close]

BLAST of PI0001325 vs. ExPASy TrEMBL
Match: A0A5A7UKE6 (Integrase, catalytic core OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold480G00500 PE=4 SV=1)

HSP 1 Score: 306.2 bits (783), Expect = 1.4e-79
Identity = 152/200 (76.00%), Postives = 169/200 (84.50%), Query Frame = 0


Query: 79  VTGDITKPIKPTPPRKNISQDTIENVDANLSDVTIHETTAEDVKYIEKLKDWDSKNHQII 138
           VTGDITKP+KP PP ++  Q++IE+     +D+  H+TTAED+KYIE+L+DWD KNHQII
Sbjct: 38  VTGDITKPVKPIPPVQSTGQNSIEH-----NDIMDHDTTAEDIKYIERLEDWDRKNHQII 97

Query: 139 TWLGNTSILAIHTQFDAFDTAKELWDFLFIHFQSIGLAHYYQLHSRLVSLNQEVGQSVNE 198
           TWLGNTSI  IHTQFDAFDTAKELWDFL+  FQSIGLAHYYQLHS LVSLNQEVGQSVNE
Sbjct: 98  TWLGNTSIPVIHTQFDAFDTAKELWDFLYTRFQSIGLAHYYQLHSTLVSLNQEVGQSVNE 157

Query: 199 YFATFQPIWTQLDHAKISSDHIRLIKVLMGLRPEYKSVCAALLHCNPLPSLDAVIQEILF 258
           Y AT QPIWTQL+ AKIS DHI LIKVLMGLRPEY+SV AALLH NPLPSLD  IQ+ILF
Sbjct: 158 YLATLQPIWTQLEQAKISLDHIHLIKVLMGLRPEYESVYAALLHRNPLPSLDVAIQKILF 217

Query: 259 EEKRLGNVFSLPSDVALATT 279
           EEKRL    SLPSDVAL T+
Sbjct: 218 EEKRLDIFSSLPSDVALTTS 232

[Close]

BLAST of PI0001325 vs. ExPASy TrEMBL
Match: A0A5D3DG18 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold195G00850 PE=4 SV=1)

HSP 1 Score: 300.8 bits (769), Expect = 5.8e-78
Identity = 152/201 (75.62%), Postives = 164/201 (81.59%), Query Frame = 0


Query: 79  VTGDITKPIKPTPPRKNISQDTIENVDANLSDVTIHETTAEDVKYIEKLKDWDSKNHQII 138
           VTGDITKP+KP                       +HET+AED++YIE+L+DWDSKNHQII
Sbjct: 39  VTGDITKPVKP----------------------IVHETSAEDIQYIERLEDWDSKNHQII 98

Query: 139 TWLGNTSILAIHTQFDAFDTAKELWDFLFIHFQSIGLAHYYQLHSRLVSLNQEVGQSVNE 198
           TWLGNTSI AIHTQFDAFD+AKELWDFL+  FQSIGLAHYYQLHS LVSLNQE+GQSVNE
Sbjct: 99  TWLGNTSIPAIHTQFDAFDSAKELWDFLYTRFQSIGLAHYYQLHSTLVSLNQEMGQSVNE 158

Query: 199 YFATFQPIWTQLDHAKISSDHIRLIKVLMGLRPEYKSVCAALLHCNPLPSLDAVIQEILF 258
           Y AT QPIWTQLD AKIS DHIRLIKVLMGLRPEY+SV AALLH NPLPSLDA +QEILF
Sbjct: 159 YLATLQPIWTQLDQAKISPDHIRLIKVLMGLRPEYESVRAALLHRNPLPSLDAAVQEILF 217

Query: 259 EEKRLGNVFSLPSDVALATTH 280
           EEKRLG V SL SDVALATTH
Sbjct: 219 EEKRLGIVSSLHSDVALATTH 217

[Close]

BLAST of PI0001325 vs. NCBI nr
Match: KAA0047794.1 (putative mitochondrial protein [Cucumis melo var. makuwa])

HSP 1 Score: 328.2 bits (840), Expect = 7.0e-86
Identity = 160/201 (79.60%), Postives = 176/201 (87.56%), Query Frame = 0


Query: 79  VTGDITKPIKPTPPRKNISQDTIENVDANLSDVTIHETTAEDVKYIEKLKDWDSKNHQII 138
           VTGDITKP+KPT P KN S++  E+ DAN SD+ +HE T ED++YIE+L+DWDSKNHQII
Sbjct: 39  VTGDITKPVKPTFPMKNTSKNNTEHNDANTSDIIVHEPTVEDIQYIERLEDWDSKNHQII 98

Query: 139 TWLGNTSILAIHTQFDAFDTAKELWDFLFIHFQSIGLAHYYQLHSRLVSLNQEVGQSVNE 198
           TWLGNTSI AIHTQFD FD+AKELW+FL+  FQSIGLAHYYQLHS LV+LNQEVGQSVNE
Sbjct: 99  TWLGNTSIPAIHTQFDTFDSAKELWNFLYTRFQSIGLAHYYQLHSTLVNLNQEVGQSVNE 158

Query: 199 YFATFQPIWTQLDHAKISSDHIRLIKVLMGLRPEYKSVCAALLHCNPLPSLDAVIQEILF 258
           Y  TFQPIWTQLD AKIS DHIRLIKVLMGLR EY+SV AALLH NPLPSLDA +QEILF
Sbjct: 159 YLVTFQPIWTQLDQAKISPDHIRLIKVLMGLRSEYESVRAALLHRNPLPSLDAAVQEILF 218

Query: 259 EEKRLGNVFSLPSDVALATTH 280
           EEKRLG V SLPSDVALATTH
Sbjct: 219 EEKRLGIVSSLPSDVALATTH 239

[Close]

BLAST of PI0001325 vs. NCBI nr
Match: XP_031739694.1 (uncharacterized protein LOC105434738 [Cucumis sativus])

HSP 1 Score: 323.2 bits (827), Expect = 2.3e-84
Identity = 164/201 (81.59%), Postives = 173/201 (86.07%), Query Frame = 0


Query: 79  VTGDITKPIKPTPPRKNISQDTIENVDANLSDVTIHETTAEDVKYIEKLKDWDSKNHQII 138
           VTGDITKP+KPTP       DT EN+D + SDVT+ ETTAE  KYIE+L+DWDSKNHQII
Sbjct: 39  VTGDITKPVKPTP-----LMDTTENIDTDPSDVTVQETTAETDKYIERLEDWDSKNHQII 98

Query: 139 TWLGNTSILAIHTQFDAFDTAKELWDFLFIHFQSIGLAHYYQLHSRLVSLNQEVGQSVNE 198
           TWLGNTSI AIHTQFDAFDTAKELWDFL   FQSIGLAHYYQLHSRLVSLNQE GQSVNE
Sbjct: 99  TWLGNTSIPAIHTQFDAFDTAKELWDFLSTRFQSIGLAHYYQLHSRLVSLNQEGGQSVNE 158

Query: 199 YFATFQPIWTQLDHAKISSDHIRLIKVLMGLRPEYKSVCAALLHCNPLPSLDAVIQEILF 258
           Y AT QPIWTQLD AKI+ +HIRLIKVLMGLRPEY+SV AALLH NPLPSLDA IQEILF
Sbjct: 159 YLATLQPIWTQLDQAKINPEHIRLIKVLMGLRPEYESVRAALLHRNPLPSLDAAIQEILF 218

Query: 259 EEKRLGNVFSLPSDVALATTH 280
           EE RLG V SLPSDVALATTH
Sbjct: 219 EENRLGIVSSLPSDVALATTH 234

[Close]

BLAST of PI0001325 vs. NCBI nr
Match: XP_016901896.1 (PREDICTED: uncharacterized protein LOC107991463 [Cucumis melo])

HSP 1 Score: 319.3 bits (817), Expect = 3.3e-83
Identity = 160/201 (79.60%), Postives = 172/201 (85.57%), Query Frame = 0


Query: 79  VTGDITKPIKPTPPRKNISQDTIENVDANLSDVTIHETTAEDVKYIEKLKDWDSKNHQII 138
           VTGDITKPIKPT P KNI         AN SDV IHETTAED+KYIE+L+DWDSKNHQII
Sbjct: 39  VTGDITKPIKPTTPMKNIDN------TANTSDVLIHETTAEDIKYIERLEDWDSKNHQII 98

Query: 139 TWLGNTSILAIHTQFDAFDTAKELWDFLFIHFQSIGLAHYYQLHSRLVSLNQEVGQSVNE 198
           TWLGNTSI AIHTQ D+FDTAKELWDFL   FQSIGLAHYYQL+S L++LNQEVGQSVNE
Sbjct: 99  TWLGNTSIPAIHTQLDSFDTAKELWDFLATRFQSIGLAHYYQLYSTLINLNQEVGQSVNE 158

Query: 199 YFATFQPIWTQLDHAKISSDHIRLIKVLMGLRPEYKSVCAALLHCNPLPSLDAVIQEILF 258
           Y AT QPIWTQLD  KI+ DHIRLIKVLMGLRPEY+SV AALLH NPLPSLDA +QEILF
Sbjct: 159 YLATLQPIWTQLDQTKINPDHIRLIKVLMGLRPEYESVRAALLHRNPLPSLDAAVQEILF 218

Query: 259 EEKRLGNVFSLPSDVALATTH 280
           EEKRLG V +LPSDVALATT+
Sbjct: 219 EEKRLGIVSALPSDVALATTY 233

[Close]

BLAST of PI0001325 vs. NCBI nr
Match: KAA0037189.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa] >TYK13883.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa])

HSP 1 Score: 315.8 bits (808), Expect = 3.6e-82
Identity = 158/199 (79.40%), Postives = 170/199 (85.43%), Query Frame = 0


Query: 81  GDITKPIKPTPPRKNISQDTIENVDANLSDVTIHETTAEDVKYIEKLKDWDSKNHQIITW 140
           GDITKPIKPT P KNI         AN SDV IHETTAED+KYIE+L+DWDSKNHQIITW
Sbjct: 16  GDITKPIKPTTPMKNIDN------TANTSDVLIHETTAEDIKYIERLEDWDSKNHQIITW 75

Query: 141 LGNTSILAIHTQFDAFDTAKELWDFLFIHFQSIGLAHYYQLHSRLVSLNQEVGQSVNEYF 200
           LGNTSI AIHTQ D+FDTAKELWDFL   FQSIGLAHYYQL+S L++LNQEVGQSVNEY 
Sbjct: 76  LGNTSIPAIHTQLDSFDTAKELWDFLATRFQSIGLAHYYQLYSTLINLNQEVGQSVNEYL 135

Query: 201 ATFQPIWTQLDHAKISSDHIRLIKVLMGLRPEYKSVCAALLHCNPLPSLDAVIQEILFEE 260
           AT QPIWTQLD  KI+ DHIRLIKVLMGLRPEY+SV AALLH NPLPSLDA +QEILFEE
Sbjct: 136 ATLQPIWTQLDQTKINPDHIRLIKVLMGLRPEYESVRAALLHRNPLPSLDAAVQEILFEE 195

Query: 261 KRLGNVFSLPSDVALATTH 280
           KRLG V +LPSDVALATT+
Sbjct: 196 KRLGIVSALPSDVALATTY 208

[Close]

BLAST of PI0001325 vs. NCBI nr
Match: KAA0053979.1 (Integrase, catalytic core [Cucumis melo var. makuwa] >TYK20664.1 Integrase, catalytic core [Cucumis melo var. makuwa])

HSP 1 Score: 306.2 bits (783), Expect = 2.9e-79
Identity = 152/200 (76.00%), Postives = 169/200 (84.50%), Query Frame = 0


Query: 79  VTGDITKPIKPTPPRKNISQDTIENVDANLSDVTIHETTAEDVKYIEKLKDWDSKNHQII 138
           VTGDITKP+KP PP ++  Q++IE+     +D+  H+TTAED+KYIE+L+DWD KNHQII
Sbjct: 38  VTGDITKPVKPIPPVQSTGQNSIEH-----NDIMDHDTTAEDIKYIERLEDWDRKNHQII 97

Query: 139 TWLGNTSILAIHTQFDAFDTAKELWDFLFIHFQSIGLAHYYQLHSRLVSLNQEVGQSVNE 198
           TWLGNTSI  IHTQFDAFDTAKELWDFL+  FQSIGLAHYYQLHS LVSLNQEVGQSVNE
Sbjct: 98  TWLGNTSIPVIHTQFDAFDTAKELWDFLYTRFQSIGLAHYYQLHSTLVSLNQEVGQSVNE 157

Query: 199 YFATFQPIWTQLDHAKISSDHIRLIKVLMGLRPEYKSVCAALLHCNPLPSLDAVIQEILF 258
           Y AT QPIWTQL+ AKIS DHI LIKVLMGLRPEY+SV AALLH NPLPSLD  IQ+ILF
Sbjct: 158 YLATLQPIWTQLEQAKISLDHIHLIKVLMGLRPEYESVYAALLHRNPLPSLDVAIQKILF 217

Query: 259 EEKRLGNVFSLPSDVALATT 279
           EEKRL    SLPSDVAL T+
Sbjct: 218 EEKRLDIFSSLPSDVALTTS 232

The following BLAST results are available for this feature:

BLAST of PI0001325 vs.


Match Name	E-value	Identity	Description

BLAST of PI0001325 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7TXR0	3.4e-86	79.60	Putative mitochondrial protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_s...	[more]
A0A1S4E0Y9	1.6e-83	79.60	uncharacterized protein LOC107991463 OS=Cucumis melo OX=3656 GN=LOC107991463 PE=...	[more]
A0A5D3CPU5	1.8e-82	79.40	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var....	[more]
A0A5A7UKE6	1.4e-79	76.00	Integrase, catalytic core OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffo...	[more]
A0A5D3DG18	5.8e-78	75.62	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var....	[more]

BLAST of PI0001325 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0047794.1	7.0e-86	79.60	putative mitochondrial protein [Cucumis melo var. makuwa]	[more]
XP_031739694.1	2.3e-84	81.59	uncharacterized protein LOC105434738 [Cucumis sativus]	[more]
XP_016901896.1	3.3e-83	79.60	PREDICTED: uncharacterized protein LOC107991463 [Cucumis melo]	[more]
KAA0037189.1	3.6e-82	79.40	Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. m...	[more]
KAA0053979.1	2.9e-79	76.00	Integrase, catalytic core [Cucumis melo var. makuwa] >TYK20664.1 Integrase, cata...	[more]

BLAST of PI0001325 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PFAM	PF14223	Retrotran_gag_2	coord: 148..263 e-value: 5.6E-12 score: 45.6

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0001325.1	PI0001325.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0008270	zinc ion binding