PI0001290 (gene) Melon (PI 482460) v1

Overview


Name	PI0001290
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	Reverse transcriptase domain-containing protein
Location	chr01: 14552119 .. 14554428 (+)
RNA-Seq Expression	PI0001290
Synteny	PI0001290

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGAATGGAAGTAAGAAAAGATTCTCATTATAATCAAGACGTTAGGCCTTGCGACCATGAAGTTTTCATTACAATGCGTTTCTAAATTAATAAGTGAAATACAATGAAAAGGGTTGAGCCGCTGAGTATGATTTCTCATACTCCTTGGCTCTAATTTTTGCCTATACATTGAGGGAGAAGCAGTAGACAGACTCTCTCTCTCTATAATCAGGCTCTCACCTAGGCAGAGAAAGGAAATGGAGGAAAGGGACTCGCTCTCTCTAATTTCGCATATTGCGAATAAAGAAGTGGTCACTATATATAGGTGAGGTGTGATGTGACAGGACACTGGGTGGTTAATTAATACTTCTGCCAACCGTAACACTGTTGCAGGTGTCCTTTCTGACATCTACGCGAACTAGATTGTCGGCTAGTGCTCAGGATCGCCTAGCCATGCGTTAAGGTTTGCCTAGTTGCACGCGTGGTTCCTCGCCTGACGTTTTCTTTGCGTGGTTGCTTCTCTTTTCGTCTTAAAAACGTGCATAAGACATGGTAAAACGTGTAAAACGGGAATATGGCTCTTTTACTATTTGCGAAACAAATTATCTTCCACAATCATCAATTAATGCTATTTTCTCCGTTTCTACTGCATTATAGCTTCATTATTCTACCTGAAAGGCCACAATAACTTGTATTTCTACAAGTTATCAGCCCAACATGAGGTTGAGCGAGATCTTGGTCCTGTTGAGGTTGTCGTCAAGCTGGGCTTGCTACTGAGGCTTTCTGGTCAGCTATTAGACTAGAAAAAGCCTCTTTTCGTCATAAATCACGGATTAGGTGGTTGGAGATTGGTGATCAGAATTTCGCATTTTTCTATCATTCAGTTTGTTCTCGTATTAGTCATAATAATTTACTCTATGTTGTGGACTCTGATGGTATTCGTGTGACCTCCCATGATGGGCTGGTACATGTGGCGATTTACTTTTTTCGTAAAAGTTTGGGGTCACAAGAGATTGTTTATAGGAAGCTATCTCTTTTTGCTTAAGAAGTGGTTCAGTTTCGATGGTCTGAGGAGTGTTGTAATTCGTTACAGGCTCCTAGTAGGCGTGAGGAGGTTAGGAGGGTGCTTTTTGATATGGATAGTAGTAAGGCTCCTAGTCTTGATGATTTTTCTACGGGGTTCTTCAAAGATGCGTGGAATATGGTTGGTGAGGATTTTTGTGATGTTGTGATGCATTTCTTTGAGACTTGTTATCTGCCTACTGGTGTTAATGCTACTACGATCACTTTCATTGTCAAACGTTGTGGGGCTGAGCGTATGGAGGATTTTAGACCTATTTCGTGTTGTAATGTGGTGTATAAATGCATTTCTAAGATTTTGGCTGATAGGCTTCATGTGTGGCTTCCTTCTTTTATCAGTGGTAATTAGTCTGCCTTTGTTGCTAGGAAGAGTATTACTGATAACATTCTGCTTTGTCAGGAGTTGGTTGGGGGTTATCATAGTACTTCTAGTCCGCCTCGGTGTGCTATGAAGGTGGACCTTCAGAATGCTTATGGTTCGATCAATTAGGATTTTCTATTCAGCTTGATGATGGTTATTGGCATCCCATTGTGCTTTGTGAGTTGGATTAGGTCGTGTGTTACTTCCCCTATGTTCTCCATCATGGTTAATGGTTCTTGGAGGGATTTTTTTCTTGGAAGGAAAGGGTTGCGTTAGGGAGACCCTTTATCCCCTTTTTTGTTTGTGATGGTAATGGAGGTGCTTTCTCGTCTTTTGAATAAGCCCCCTCAGTGTTTTAAGTTTCATCATCGGTTGAGAAGGTTCGTTTGACCCATCTGACCTTCACTGATGATCTTATGATTTTTTGTGTTGTTGATGCCTCATCCATTGGGTTTGTGCAAGAGGCTCTCCATCAGTTTGGGGATTTATCGGGGCTGGTTGCTAATCTGGAGAAGAGCTCTATGTTTGTTGCAGGGGTTGACCGTGAGGATGCTACTGTGTTGGCGAATAATATGGGGTTTGCTCTGGGTACTCTTCCTGTTCGTTACCTGGGTCTTCCCTTACTCTCTGGTAGGTTGCGTCTACGGATTGCACGCCTCTCATTTAGCGTATTACTAGTCAGATTCGGTCTTGGTCTGTCCTTTGCTGGGAGACTTCAACTGGTGCGTTCTGTGTTGCAGAGTTTTCAGGTTTATTGGACTAGTGTGTTTGTTTTGTCGGTGGGTGTGCATCATGAGGTTGATAGGATTTTGATGTCGTATCTTTGGGGTAAGAAGGAAGGTAGAGGGGGGATGCAAAGGTCGCTTGGGTGGAGCTGTGTCGCCTAA

mRNA sequence

ATGGAGAATGGAACTTCATTATTCTACCTGAAAGGCCACAATAACTTGTATTTCTACAAGTTATCAGCCCAACATGAGGTTGAGCGAGATCTTGGTCCTGTTGAGGTTGTCGTCAAGCTGGGCTTGCTACTGAGGCTTTCTGTTTGTTCTCGTATTAGTCATAATAATTTACTCTATGTTGTGGACTCTGATGGTATTCGTGTGACCTCCCATGATGGGCTGGTTCGTTTGACCCATCTGACCTTCACTGATGATCTTATGATTTTTTGTGTTGTTGATGCCTCATCCATTGGGTTTGTGCAAGAGGCTCTCCATCAGTTTGGGGATTTATCGGGGCTGGTTGCTAATCTGGAGAAGAGCTCTATGTTTGTTGCAGGGGTTGACCGTGAGGATGCTACTGTGTTGGCGAATAATATGGGGTTTGCTCTGGGTACTCTTCCTGTTCGTTACCTGGGTCTTCCCTTACTCTCTGGTAGGTTGCGTCTACGGATTGCACGCCTCTCATTTAGCGTATTACTAGTCAGATTCGGTCTTGGTCTGTCCTTTGCTGGGAGACTTCAACTGGTGCGTTCTGTGTTGCAGAGTTTTCAGGTTTATTGGACTAGTGTGTTTGTTTTGTCGGTGGGTGTGCATCATGAGGTTGATAGGATTTTGATGTCGTATCTTTGGGGTAAGAAGGAAGGTAGAGGGGGGATGCAAAGGTCGCTTGGGTGGAGCTGTGTCGCCTAA

Coding sequence (CDS)

ATGGAGAATGGAACTTCATTATTCTACCTGAAAGGCCACAATAACTTGTATTTCTACAAGTTATCAGCCCAACATGAGGTTGAGCGAGATCTTGGTCCTGTTGAGGTTGTCGTCAAGCTGGGCTTGCTACTGAGGCTTTCTGTTTGTTCTCGTATTAGTCATAATAATTTACTCTATGTTGTGGACTCTGATGGTATTCGTGTGACCTCCCATGATGGGCTGGTTCGTTTGACCCATCTGACCTTCACTGATGATCTTATGATTTTTTGTGTTGTTGATGCCTCATCCATTGGGTTTGTGCAAGAGGCTCTCCATCAGTTTGGGGATTTATCGGGGCTGGTTGCTAATCTGGAGAAGAGCTCTATGTTTGTTGCAGGGGTTGACCGTGAGGATGCTACTGTGTTGGCGAATAATATGGGGTTTGCTCTGGGTACTCTTCCTGTTCGTTACCTGGGTCTTCCCTTACTCTCTGGTAGGTTGCGTCTACGGATTGCACGCCTCTCATTTAGCGTATTACTAGTCAGATTCGGTCTTGGTCTGTCCTTTGCTGGGAGACTTCAACTGGTGCGTTCTGTGTTGCAGAGTTTTCAGGTTTATTGGACTAGTGTGTTTGTTTTGTCGGTGGGTGTGCATCATGAGGTTGATAGGATTTTGATGTCGTATCTTTGGGGTAAGAAGGAAGGTAGAGGGGGGATGCAAAGGTCGCTTGGGTGGAGCTGTGTCGCCTAA

Protein sequence

MENGTSLFYLKGHNNLYFYKLSAQHEVERDLGPVEVVVKLGLLLRLSVCSRISHNNLLYVVDSDGIRVTSHDGLVRLTHLTFTDDLMIFCVVDASSIGFVQEALHQFGDLSGLVANLEKSSMFVAGVDREDATVLANNMGFALGTLPVRYLGLPLLSGRLRLRIARLSFSVLLVRFGLGLSFAGRLQLVRSVLQSFQVYWTSVFVLSVGVHHEVDRILMSYLWGKKEGRGGMQRSLGWSCVA

Homology

[Close]

BLAST of PI0001290 vs. ExPASy TrEMBL
Match: A0A5A7SPE5 (Reverse transcriptase domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold581G00620 PE=4 SV=1)

HSP 1 Score: 183.3 bits (464), Expect = 1.2e-42
Identity = 103/165 (62.42%), Postives = 124/165 (75.15%), Query Frame = 0


Query: 75   VRLTHLTFTDDLMIFCVVDASSIGFVQEALHQFGDLSGLVANLEKSSMFVAGVDREDATV 134
            V+LTHLTF DDLMIFC  D  SI F+++ L +FG+LSGL AN  KSS+FVAGV+ E+A+ 
Sbjct: 950  VKLTHLTFADDLMIFCAADELSIRFIRDCLQKFGELSGLFANPRKSSIFVAGVNNENASH 1009

Query: 135  LANNMGFALGTLPVRYLGLPLLSGRLRLR-----IARLSFSVLLVRFGLGLSFAGRLQLV 194
            LA  MGFA G LPVRYLGLPLL+GRLR       I R++  +      + LSFAGRLQLV
Sbjct: 1010 LATCMGFARGNLPVRYLGLPLLTGRLRSNDCAPLIQRITSQIRSWNARV-LSFAGRLQLV 1069

Query: 195  RSVLQSFQVYWTSVFVLSVGVHHEVDRILMSYLW-GKKEGRGGMQ 234
            RSVL+S QVYW SVFVL   VH+EVD+IL SYLW GK+EGRGG++
Sbjct: 1070 RSVLRSLQVYWASVFVLPAYVHNEVDKILRSYLWRGKEEGRGGIK 1113

[Close]

BLAST of PI0001290 vs. ExPASy TrEMBL
Match: A0A5D3DXE4 (Reverse transcriptase domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1467G00020 PE=4 SV=1)

HSP 1 Score: 183.3 bits (464), Expect = 1.2e-42
Identity = 103/165 (62.42%), Postives = 124/165 (75.15%), Query Frame = 0


Query: 75   VRLTHLTFTDDLMIFCVVDASSIGFVQEALHQFGDLSGLVANLEKSSMFVAGVDREDATV 134
            V+LTHLTF DDLMIFC  D  SI F+++ L +FG+LSGL AN  KSS+FVAGV+ E+A+ 
Sbjct: 950  VKLTHLTFADDLMIFCAADELSIRFIRDCLQKFGELSGLFANPRKSSIFVAGVNNENASH 1009

Query: 135  LANNMGFALGTLPVRYLGLPLLSGRLRLR-----IARLSFSVLLVRFGLGLSFAGRLQLV 194
            LA  MGFA G LPVRYLGLPLL+GRLR       I R++  +      + LSFAGRLQLV
Sbjct: 1010 LATCMGFARGNLPVRYLGLPLLTGRLRSNDCAPLIQRITSQIRSWNARV-LSFAGRLQLV 1069

Query: 195  RSVLQSFQVYWTSVFVLSVGVHHEVDRILMSYLW-GKKEGRGGMQ 234
            RSVL+S QVYW SVFVL   VH+EVD+IL SYLW GK+EGRGG++
Sbjct: 1070 RSVLRSLQVYWASVFVLPAYVHNEVDKILRSYLWRGKEEGRGGIK 1113

[Close]

BLAST of PI0001290 vs. ExPASy TrEMBL
Match: A0A5A7UV01 (F17F8.5 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold896G00020 PE=4 SV=1)

HSP 1 Score: 181.0 bits (458), Expect = 5.8e-42
Identity = 102/165 (61.82%), Postives = 123/165 (74.55%), Query Frame = 0


Query: 75  VRLTHLTFTDDLMIFCVVDASSIGFVQEALHQFGDLSGLVANLEKSSMFVAGVDREDATV 134
           V+LT+LTF DDLMIFC  D  SI F++E L +FG+LSGL AN  KSS+FVAGV+ E+A+ 
Sbjct: 334 VKLTYLTFADDLMIFCAADEPSIRFIRECLQKFGELSGLFANPRKSSIFVAGVNNENASH 393

Query: 135 LANNMGFALGTLPVRYLGLPLLSGRLRLR-----IARLSFSVLLVRFGLGLSFAGRLQLV 194
           LA  MGF  G LP+RYLGLPLL+GRLR       I R++ S +       LSFAGRLQLV
Sbjct: 394 LAACMGFVRGNLPIRYLGLPLLAGRLRSNDYAPLIQRIT-SRIRSWTARVLSFAGRLQLV 453

Query: 195 RSVLQSFQVYWTSVFVLSVGVHHEVDRILMSYLW-GKKEGRGGMQ 234
           R VL+S QVYW SVFVL   VHHEVD+IL+SYLW GK+EGRGG++
Sbjct: 454 RFVLRSLQVYWASVFVLPAYVHHEVDKILISYLWRGKEEGRGGIK 497

[Close]

BLAST of PI0001290 vs. ExPASy TrEMBL
Match: A0A5A7V2L9 (Putative reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold154G00900 PE=4 SV=1)

HSP 1 Score: 178.7 bits (452), Expect = 2.9e-41
Identity = 100/165 (60.61%), Postives = 122/165 (73.94%), Query Frame = 0


Query: 75  VRLTHLTFTDDLMIFCVVDASSIGFVQEALHQFGDLSGLVANLEKSSMFVAGVDREDATV 134
           V+L HLTF DDLMIFC  D SS+ F++E L +FG+LSGL  NL K+SMFVAGV+ E A+ 
Sbjct: 130 VKLNHLTFADDLMIFCAADESSLRFIRECLQKFGELSGLFVNLTKNSMFVAGVNSEVASH 189

Query: 135 LANNMGFALGTLPVRYLGLPLLSGRLRLR-----IARLSFSVLLVRFGLGLSFAGRLQLV 194
           LA +MGF LG LPVRYLGLPLLSGRLR       I R++ S +   F    SFAGRLQL+
Sbjct: 190 LAASMGFVLGNLPVRYLGLPLLSGRLRSSDCAPLIQRIT-SRIRSWFARVFSFAGRLQLI 249

Query: 195 RSVLQSFQVYWTSVFVLSVGVHHEVDRILMSYLW-GKKEGRGGMQ 234
           R VL+S QV+W SVFVL   VH++VD+IL SYLW  K+EGRGG++
Sbjct: 250 RYVLRSLQVFWASVFVLPAYVHNKVDKILRSYLWRDKEEGRGGVK 293

[Close]

BLAST of PI0001290 vs. ExPASy TrEMBL
Match: A0A5A7V3Z0 (Reverse transcriptase domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold154G00690 PE=4 SV=1)

HSP 1 Score: 178.7 bits (452), Expect = 2.9e-41
Identity = 102/165 (61.82%), Postives = 122/165 (73.94%), Query Frame = 0


Query: 75  VRLTHLTFTDDLMIFCVVDASSIGFVQEALHQFGDLSGLVANLEKSSMFVAGVDREDATV 134
           V+LTHLTF DDLMIFC  +  SI F++E L +FG+LSGL AN  KSS+FVAGV+ E+A+ 
Sbjct: 440 VKLTHLTFADDLMIFCAANEPSIRFIRECLQKFGELSGLFANPRKSSIFVAGVNNENASH 499

Query: 135 LANNMGFALGTLPVRYLGLPLLSGRLRLR-----IARLSFSVLLVRFGLGLSFAGRLQLV 194
           LA  MGF  G L VRYLGLPLL+GRLR       I R++ S +       LSFAGRLQLV
Sbjct: 500 LATCMGFVRGNLSVRYLGLPLLAGRLRSNDYAPLIQRIT-SRIRSWTARVLSFAGRLQLV 559

Query: 195 RSVLQSFQVYWTSVFVLSVGVHHEVDRILMSYLW-GKKEGRGGMQ 234
            SVL+SFQVYW SVFVL   VH+EVD+IL SYLW GK+EGRGG++
Sbjct: 560 HSVLRSFQVYWASVFVLPAYVHNEVDKILRSYLWRGKEEGRGGIK 603

[Close]

BLAST of PI0001290 vs. NCBI nr
Match: TYK28099.1 (uncharacterized protein E5676_scaffold1467G00020 [Cucumis melo var. makuwa])

HSP 1 Score: 183.3 bits (464), Expect = 2.4e-42
Identity = 103/165 (62.42%), Postives = 124/165 (75.15%), Query Frame = 0


Query: 75   VRLTHLTFTDDLMIFCVVDASSIGFVQEALHQFGDLSGLVANLEKSSMFVAGVDREDATV 134
            V+LTHLTF DDLMIFC  D  SI F+++ L +FG+LSGL AN  KSS+FVAGV+ E+A+ 
Sbjct: 950  VKLTHLTFADDLMIFCAADELSIRFIRDCLQKFGELSGLFANPRKSSIFVAGVNNENASH 1009

Query: 135  LANNMGFALGTLPVRYLGLPLLSGRLRLR-----IARLSFSVLLVRFGLGLSFAGRLQLV 194
            LA  MGFA G LPVRYLGLPLL+GRLR       I R++  +      + LSFAGRLQLV
Sbjct: 1010 LATCMGFARGNLPVRYLGLPLLTGRLRSNDCAPLIQRITSQIRSWNARV-LSFAGRLQLV 1069

Query: 195  RSVLQSFQVYWTSVFVLSVGVHHEVDRILMSYLW-GKKEGRGGMQ 234
            RSVL+S QVYW SVFVL   VH+EVD+IL SYLW GK+EGRGG++
Sbjct: 1070 RSVLRSLQVYWASVFVLPAYVHNEVDKILRSYLWRGKEEGRGGIK 1113

[Close]

BLAST of PI0001290 vs. NCBI nr
Match: KAA0026071.1 (uncharacterized protein E6C27_scaffold581G00620 [Cucumis melo var. makuwa])

HSP 1 Score: 183.3 bits (464), Expect = 2.4e-42
Identity = 103/165 (62.42%), Postives = 124/165 (75.15%), Query Frame = 0


Query: 75   VRLTHLTFTDDLMIFCVVDASSIGFVQEALHQFGDLSGLVANLEKSSMFVAGVDREDATV 134
            V+LTHLTF DDLMIFC  D  SI F+++ L +FG+LSGL AN  KSS+FVAGV+ E+A+ 
Sbjct: 950  VKLTHLTFADDLMIFCAADELSIRFIRDCLQKFGELSGLFANPRKSSIFVAGVNNENASH 1009

Query: 135  LANNMGFALGTLPVRYLGLPLLSGRLRLR-----IARLSFSVLLVRFGLGLSFAGRLQLV 194
            LA  MGFA G LPVRYLGLPLL+GRLR       I R++  +      + LSFAGRLQLV
Sbjct: 1010 LATCMGFARGNLPVRYLGLPLLTGRLRSNDCAPLIQRITSQIRSWNARV-LSFAGRLQLV 1069

Query: 195  RSVLQSFQVYWTSVFVLSVGVHHEVDRILMSYLW-GKKEGRGGMQ 234
            RSVL+S QVYW SVFVL   VH+EVD+IL SYLW GK+EGRGG++
Sbjct: 1070 RSVLRSLQVYWASVFVLPAYVHNEVDKILRSYLWRGKEEGRGGIK 1113

[Close]

BLAST of PI0001290 vs. NCBI nr
Match: KAA0059752.1 (F17F8.5 [Cucumis melo var. makuwa] >TYJ99767.1 F17F8.5 [Cucumis melo var. makuwa])

HSP 1 Score: 181.0 bits (458), Expect = 1.2e-41
Identity = 102/165 (61.82%), Postives = 123/165 (74.55%), Query Frame = 0


Query: 75  VRLTHLTFTDDLMIFCVVDASSIGFVQEALHQFGDLSGLVANLEKSSMFVAGVDREDATV 134
           V+LT+LTF DDLMIFC  D  SI F++E L +FG+LSGL AN  KSS+FVAGV+ E+A+ 
Sbjct: 334 VKLTYLTFADDLMIFCAADEPSIRFIRECLQKFGELSGLFANPRKSSIFVAGVNNENASH 393

Query: 135 LANNMGFALGTLPVRYLGLPLLSGRLRLR-----IARLSFSVLLVRFGLGLSFAGRLQLV 194
           LA  MGF  G LP+RYLGLPLL+GRLR       I R++ S +       LSFAGRLQLV
Sbjct: 394 LAACMGFVRGNLPIRYLGLPLLAGRLRSNDYAPLIQRIT-SRIRSWTARVLSFAGRLQLV 453

Query: 195 RSVLQSFQVYWTSVFVLSVGVHHEVDRILMSYLW-GKKEGRGGMQ 234
           R VL+S QVYW SVFVL   VHHEVD+IL+SYLW GK+EGRGG++
Sbjct: 454 RFVLRSLQVYWASVFVLPAYVHHEVDKILISYLWRGKEEGRGGIK 497

[Close]

BLAST of PI0001290 vs. NCBI nr
Match: KAA0062318.1 (uncharacterized protein E6C27_scaffold154G00690 [Cucumis melo var. makuwa])

HSP 1 Score: 178.7 bits (452), Expect = 6.0e-41
Identity = 102/165 (61.82%), Postives = 122/165 (73.94%), Query Frame = 0


Query: 75  VRLTHLTFTDDLMIFCVVDASSIGFVQEALHQFGDLSGLVANLEKSSMFVAGVDREDATV 134
           V+LTHLTF DDLMIFC  +  SI F++E L +FG+LSGL AN  KSS+FVAGV+ E+A+ 
Sbjct: 440 VKLTHLTFADDLMIFCAANEPSIRFIRECLQKFGELSGLFANPRKSSIFVAGVNNENASH 499

Query: 135 LANNMGFALGTLPVRYLGLPLLSGRLRLR-----IARLSFSVLLVRFGLGLSFAGRLQLV 194
           LA  MGF  G L VRYLGLPLL+GRLR       I R++ S +       LSFAGRLQLV
Sbjct: 500 LATCMGFVRGNLSVRYLGLPLLAGRLRSNDYAPLIQRIT-SRIRSWTARVLSFAGRLQLV 559

Query: 195 RSVLQSFQVYWTSVFVLSVGVHHEVDRILMSYLW-GKKEGRGGMQ 234
            SVL+SFQVYW SVFVL   VH+EVD+IL SYLW GK+EGRGG++
Sbjct: 560 HSVLRSFQVYWASVFVLPAYVHNEVDKILRSYLWRGKEEGRGGIK 603

[Close]

BLAST of PI0001290 vs. NCBI nr
Match: KAA0062333.1 (putative reverse transcriptase [Cucumis melo var. makuwa])

HSP 1 Score: 178.7 bits (452), Expect = 6.0e-41
Identity = 100/165 (60.61%), Postives = 122/165 (73.94%), Query Frame = 0


Query: 75  VRLTHLTFTDDLMIFCVVDASSIGFVQEALHQFGDLSGLVANLEKSSMFVAGVDREDATV 134
           V+L HLTF DDLMIFC  D SS+ F++E L +FG+LSGL  NL K+SMFVAGV+ E A+ 
Sbjct: 130 VKLNHLTFADDLMIFCAADESSLRFIRECLQKFGELSGLFVNLTKNSMFVAGVNSEVASH 189

Query: 135 LANNMGFALGTLPVRYLGLPLLSGRLRLR-----IARLSFSVLLVRFGLGLSFAGRLQLV 194
           LA +MGF LG LPVRYLGLPLLSGRLR       I R++ S +   F    SFAGRLQL+
Sbjct: 190 LAASMGFVLGNLPVRYLGLPLLSGRLRSSDCAPLIQRIT-SRIRSWFARVFSFAGRLQLI 249

Query: 195 RSVLQSFQVYWTSVFVLSVGVHHEVDRILMSYLW-GKKEGRGGMQ 234
           R VL+S QV+W SVFVL   VH++VD+IL SYLW  K+EGRGG++
Sbjct: 250 RYVLRSLQVFWASVFVLPAYVHNKVDKILRSYLWRDKEEGRGGVK 293

[Close]

BLAST of PI0001290 vs. TAIR 10
Match: AT3G24255.1 (RNA-directed DNA polymerase (reverse transcriptase)-related family protein )

HSP 1 Score: 68.9 bits (167), Expect = 6.2e-12
Identity = 44/108 (40.74%), Postives = 57/108 (52.78%), Query Frame = 0


Query: 124 VAGVDREDATVLANNMGFALGTLPVRYLGLPLLSGRLRLRIARLSFSVLLVRFG----LG 183
           +AGV   D   + ++  FA G LPVRYLGLPLL+ ++           + VR G      
Sbjct: 1   MAGVKDNDKADILHSFPFASGALPVRYLGLPLLTKKMTTSDYGPLVEKIRVRIGKWTARH 60

Query: 184 LSFAGRLQLVRSVLQSFQVYWTSVFVLSVGVHHEVDRILMSYLWGKKE 228
           LSFAGRLQL+ SV+ S   +W S F L      E+D I  S+LW   E
Sbjct: 61  LSFAGRLQLISSVIHSLTNFWMSAFRLPSACIKEIDSICSSFLWSGPE 108

The following BLAST results are available for this feature:

BLAST of PI0001290 vs.


Match Name	E-value	Identity	Description

BLAST of PI0001290 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7SPE5	1.2e-42	62.42	Reverse transcriptase domain-containing protein OS=Cucumis melo var. makuwa OX=1...	[more]
A0A5D3DXE4	1.2e-42	62.42	Reverse transcriptase domain-containing protein OS=Cucumis melo var. makuwa OX=1...	[more]
A0A5A7UV01	5.8e-42	61.82	F17F8.5 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold896G00020 PE=4 S...	[more]
A0A5A7V2L9	2.9e-41	60.61	Putative reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_s...	[more]
A0A5A7V3Z0	2.9e-41	61.82	Reverse transcriptase domain-containing protein OS=Cucumis melo var. makuwa OX=1...	[more]

BLAST of PI0001290 vs. NCBI nr


Match Name	E-value	Identity	Description
TYK28099.1	2.4e-42	62.42	uncharacterized protein E5676_scaffold1467G00020 [Cucumis melo var. makuwa]	[more]
KAA0026071.1	2.4e-42	62.42	uncharacterized protein E6C27_scaffold581G00620 [Cucumis melo var. makuwa]	[more]
KAA0059752.1	1.2e-41	61.82	F17F8.5 [Cucumis melo var. makuwa] >TYJ99767.1 F17F8.5 [Cucumis melo var. makuwa...	[more]
KAA0062318.1	6.0e-41	61.82	uncharacterized protein E6C27_scaffold154G00690 [Cucumis melo var. makuwa]	[more]
KAA0062333.1	6.0e-41	60.61	putative reverse transcriptase [Cucumis melo var. makuwa]	[more]

BLAST of PI0001290 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G24255.1	6.2e-12	40.74	RNA-directed DNA polymerase (reverse transcriptase)-related family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33116	REVERSE TRANSCRIPTASE ZINC-BINDING DOMAIN-CONTAINING PROTEIN-RELATED-RELATED	coord: 55..228

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0001290.1	PI0001290.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016020	membrane