PI0001228 (gene) Melon (PI 482460) v1

Overview


Name	PI0001228
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	RING-type domain-containing protein
Location	chr06: 24072026 .. 24074095 (+)
RNA-Seq Expression	PI0001228
Synteny	PI0001228

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCTGCTGCAACCGGGGGTTCTCAGAGGGCGAGCAACGTGGCAATAGGAATGGAGAAACGACTGCGACAGCGGTAGCAACCGTGATGGTGGATCCTGAGGAGCGGAATCGTCAAATTCAAATGGCGATGGAGAAGTTGACGAAGCCATCAGCATATTATGATTACGAAGAGAATGATAAATCTCCATCGACATTGAGTGAATGCACGATATGTTTGGAGGATCTTGGAGAAAGAGTTTCGTGTCGAGTTTTTCCTAATTGCAAGCATATATTCCATACACATTGCATAATCAATTGGTTAGAGATTAATCAAACTTGTCCAATGTGTCGGACTCAGTTGTAGTCCACAACTACACCAACTCGAGTAAAGCTTAATTGGTTAAGACATGTACATTTAATTCAGGTATGTTGAACCAAAAAAAAACAAAAATTGCAGGGCCACAACAGACGTTATTCTATTCTAAGGCAATGTGTGGAAAGTTTTGTCTTTCAATTTACTCACAGGTTGAGGTTGTGCAATAATATTGAATTTAATTAGTGTGTTTTTTAATAGCTTCCCAACCAAAAAAATTGTTTTGTTTTTAAATGAACTCATATATATTTATCTTTTCAGGTCTATTTGGTGTCAATAATCTAAATTTTGTTTTATGTTTATTAGATTTAATTAGTCTCTTGGTAGATAATTTTACGATCCTATTTTTAAATATTGTTTGTTTTGAGATTTTTTAATCCAAACCCTGCAAATTTTGGAAACAGTTAACGTTTTTATATATTTTTAATGTATTAGTATTTTCAATTTTAAATCTTTAAAATGCACAATTATATTAAAAACACCCTTCATCTTTTAAATTAAAATATTTAGGGTGTAATTTATTATAAATTATATAATATTACAAAATAATAATTATATAAAAAATTTAACTAAAAATAATTGTTTAATTAACTTATAATCTAATTTTTAAATCAGTGTCGTCAACACACGTATATAAAAACATAAAATATAACTTTGTTTCATTGAATGACACCAACCCTAATAATTTGAAGTAAAATTTTGTCATATAGCTAAAAATAAATACTATGGAATGAAAAATGTCAACAAAAAGAACAGTACAATCAAACTAGAAGACTACATGATGAGTCACAGAACCATAAAAAACCACTAAGGATAAGGAGAAGTAAGACAAAAAGATCCACACTCCTTTAAAGCTTTAGACGCAAGAGAGTACACAAGACCATTATGACACTGACAAACATAAGAGAAAGAGATAACTCCTAAAATATTATCTCATGTCTTTGCCACCTCAATGAAGAAAGAAACCTATGTGATATCAACCACAATGTTATTCAGTAGGTTAGTCACCTCTAAGAAATCAGATTCCGCCATAAAATTTGAATGAAGGATTTGGGCTACACTCTCAAAATCAAGACAAATTAATTATCATCATTTCAAGAGTTTTCACCTCATCGTATCTAGGAATGAACTTTGTGCTAGCAAGATGAAACCTGACTAGATGATCCTTAATAGCACCCACTTAAGACCTCCCATCTTAGATACAGGATTCTAGGCCATCAATGTTCAGCTTCCAAAACGTCATCACGATGATTGTCATTCGATCTCCATTGTGCCTTTTCCATCTGACCCTCCTCACCAATCCTAACTCCTAAGTATATTGACCAATTGACTCACTAATGGACTTAATTAGCAGCAACCAGTTGCAATTGAAACAATATGTTATTCCTCCCTTCCAAATTTGCCAAACAATAGTACGTCACAACTTTATTCTAATCCATGAAGATGATTGATAGCACTCCAGAGGAGCTATCTTTCTCGGCCTAAATCACGTTAGTCCTATTGTATTTAATATTTATTCTAGTCATTAGACAGATTATTTAACAGTAGGAGCCTTCAGGAGAGTTTAGATACAGTTTGGGTTTAAACAAAGTAGTTAAGAAGAAAACATGTTGGGTTTTATGTCCTAAAGCTCGTGGTTAGTAAATGCTAAATATTTTATGTTATTTAATAAATTTTCTATTGAGATATTGTTCAATAAATTGTTATTGAATGAATGA

mRNA sequence

ATGCTGCTGCAACCGGGGGAGCGGAATCGTCAAATTCAAATGGCGATGGAGAAGTTGACGAAGCCATCAGCATATTATGATTACGAAGAGAATGATAAATCTCCATCGACATTGAGTGAATGCACGATATGTTTGGAGGATCTTGGAGAAAGAGTTTCGTGTCGAGTTTTTCCTAATTGCAAGCATATATTCCATACACATTGCATAATCAATTGGTTAGAGATTAATCAAACTTGTCCAATGTTAAATGCTAAATATTTTATGTTATTTAATAAATTTTCTATTGAGATATTGTTCAATAAATTGTTATTGAATGAATGA

Coding sequence (CDS)

ATGCTGCTGCAACCGGGGGAGCGGAATCGTCAAATTCAAATGGCGATGGAGAAGTTGACGAAGCCATCAGCATATTATGATTACGAAGAGAATGATAAATCTCCATCGACATTGAGTGAATGCACGATATGTTTGGAGGATCTTGGAGAAAGAGTTTCGTGTCGAGTTTTTCCTAATTGCAAGCATATATTCCATACACATTGCATAATCAATTGGTTAGAGATTAATCAAACTTGTCCAATGTTAAATGCTAAATATTTTATGTTATTTAATAAATTTTCTATTGAGATATTGTTCAATAAATTGTTATTGAATGAATGA

Protein sequence

MLLQPGERNRQIQMAMEKLTKPSAYYDYEENDKSPSTLSECTICLEDLGERVSCRVFPNCKHIFHTHCIINWLEINQTCPMLNAKYFMLFNKFSIEILFNKLLLNE

Homology

[Close]

BLAST of PI0001228 vs. ExPASy Swiss-Prot
Match: Q8LF65 (RING-H2 finger protein ATL17 OS=Arabidopsis thaliana OX=3702 GN=ATL17 PE=2 SV=2)

HSP 1 Score: 57.8 bits (138), Expect = 8.8e-08
Identity = 20/46 (43.48%), Postives = 29/46 (63.04%), Query Frame = 0


Query: 40  ECTICLEDLGERVSCRVFPNCKHIFHTHCIINWLEINQTCPMLNAK 86
           EC++CL +  +  S RV PNCKH FH HCI  W   + +CP+  ++
Sbjct: 75  ECSVCLSEFKDNESGRVMPNCKHTFHVHCIDMWFHSHSSCPLCRSQ 120

[Close]

BLAST of PI0001228 vs. ExPASy Swiss-Prot
Match: Q8RXX9 (E3 ubiquitin-protein ligase ATL6 OS=Arabidopsis thaliana OX=3702 GN=ATL6 PE=1 SV=2)

HSP 1 Score: 57.8 bits (138), Expect = 8.8e-08
Identity = 25/65 (38.46%), Postives = 34/65 (52.31%), Query Frame = 0


Query: 20  TKPSAYYDYEENDKSPSTLSECTICLEDLGERVSCRVFPNCKHIFHTHCIINWLEINQTC 79
           T P+  Y   +  K      EC ICL +  +  + R+ P C H+FH HCI  WLE + TC
Sbjct: 107 TFPTFLYSDVKTQKLGKGELECAICLNEFEDDETLRLLPKCDHVFHPHCIDAWLEAHVTC 166

Query: 80  PMLNA 85
           P+  A
Sbjct: 167 PVCRA 171

[Close]

BLAST of PI0001228 vs. ExPASy Swiss-Prot
Match: Q9SLC4 (RING-H2 finger protein ATL40 OS=Arabidopsis thaliana OX=3702 GN=ATL40 PE=2 SV=1)

HSP 1 Score: 57.4 bits (137), Expect = 1.2e-07
Identity = 20/43 (46.51%), Postives = 28/43 (65.12%), Query Frame = 0


Query: 39  SECTICLEDLGERVSCRVFPNCKHIFHTHCIINWLEINQTCPM 82
           +EC +CL  L E+ + R+ PNCKH+FH  C+  WL    TCP+
Sbjct: 98  TECAVCLSLLEEKDNARMLPNCKHVFHVSCVDTWLTTQSTCPV 140

[Close]

BLAST of PI0001228 vs. ExPASy Swiss-Prot
Match: Q8RX29 (RING-H2 finger protein ATL70 OS=Arabidopsis thaliana OX=3702 GN=ATL70 PE=2 SV=1)

HSP 1 Score: 57.0 bits (136), Expect = 1.5e-07
Identity = 23/49 (46.94%), Postives = 29/49 (59.18%), Query Frame = 0


Query: 33  KSPSTLSECTICLEDLGERVSCRVFPNCKHIFHTHCIINWLEINQTCPM 82
           K P+T S C ICL D   +   R  P+C H+FH  CI  WL +N TCP+
Sbjct: 139 KGPTTASCCAICLGDYKGKHLLRQLPDCNHLFHLKCIDTWLRLNPTCPV 187

[Close]

BLAST of PI0001228 vs. ExPASy Swiss-Prot
Match: Q9FG21 (Putative RING-H2 finger protein ATL71 OS=Arabidopsis thaliana OX=3702 GN=ATL71 PE=3 SV=1)

HSP 1 Score: 56.2 bits (134), Expect = 2.6e-07
Identity = 22/49 (44.90%), Postives = 31/49 (63.27%), Query Frame = 0


Query: 33  KSPSTLSECTICLEDLGERVSCRVFPNCKHIFHTHCIINWLEINQTCPM 82
           K  ST S C+ICL D  +    RV P+C H+FH +C+  WL ++ TCP+
Sbjct: 121 KESSTTSCCSICLADYKKMDMIRVLPDCNHLFHDNCVDPWLRLHPTCPV 169

[Close]

BLAST of PI0001228 vs. ExPASy TrEMBL
Match: A0A0A0L7Y8 (RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G104940 PE=4 SV=1)

HSP 1 Score: 172.2 bits (435), Expect = 1.2e-39
Identity = 82/98 (83.67%), Postives = 89/98 (90.82%), Query Frame = 0


Query: 1  MLLQPGERNRQIQMAMEKLTKPSAYYDYEENDKSPSTLSECTICLEDLGERVSCRVFPNC 60
          MLLQPGERNRQ+QMAMEKLTKPSAYY+ EEND+SPSTLSECTICLEDLGERVSCRVFPNC
Sbjct: 1  MLLQPGERNRQLQMAMEKLTKPSAYYNCEENDESPSTLSECTICLEDLGERVSCRVFPNC 60

Query: 61 KHIFHTHCIINWLEINQTCPM---LNAKYFMLFNKFSI 96
          KHIFHTHCIINWLEINQTCP+   +NA+ F L  KF +
Sbjct: 61 KHIFHTHCIINWLEINQTCPISQPINARTFNLGYKFML 98

[Close]

BLAST of PI0001228 vs. ExPASy TrEMBL
Match: V4WEW6 (RING-type domain-containing protein OS=Citrus clementina OX=85681 GN=CICLE_v10010182mg PE=4 SV=1)

HSP 1 Score: 72.0 bits (175), Expect = 1.7e-09
Identity = 34/76 (44.74%), Postives = 43/76 (56.58%), Query Frame = 0


Query: 6   GERNRQIQMAMEKLTKPSAYYDYEENDKSPSTLSECTICLEDLGERVSCRVFPNCKHIFH 65
           GER  Q Q A+EKL     Y     + +  S   +C+ICL+D  +   CRVFP CKHIFH
Sbjct: 81  GERREQRQEALEKLLPLVKYGSSSSSGEILSNFGDCSICLDDYRDGEFCRVFPVCKHIFH 140

Query: 66  THCIINWLEINQTCPM 82
             CI +WL    TCP+
Sbjct: 141 VKCIDHWLNNQLTCPI 156

[Close]

BLAST of PI0001228 vs. ExPASy TrEMBL
Match: A0A5D2W4C4 (RING-type domain-containing protein OS=Gossypium mustelinum OX=34275 GN=E1A91_D01G068400v1 PE=4 SV=1)

HSP 1 Score: 72.0 bits (175), Expect = 1.7e-09
Identity = 36/69 (52.17%), Postives = 43/69 (62.32%), Query Frame = 0


Query: 13  QMAMEKLTKPSAYYDYEENDKSPSTLSECTICLEDLGERVSCRVFPNCKHIFHTHCIINW 72
           Q A+EKL  P AY      DK     SEC ICL+D     SCRVFP+CKHIFH  CI +W
Sbjct: 111 QQALEKLLPPMAY----GVDKHALKSSECPICLDDYVVGESCRVFPDCKHIFHLSCIDHW 170

Query: 73  LEINQTCPM 82
           L+ + TCP+
Sbjct: 171 LKNHLTCPV 175

[Close]

BLAST of PI0001228 vs. ExPASy TrEMBL
Match: A0A067FG84 (RING-type domain-containing protein OS=Citrus sinensis OX=2711 GN=CISIN_1g035583mg PE=4 SV=1)

HSP 1 Score: 71.6 bits (174), Expect = 2.2e-09
Identity = 34/76 (44.74%), Postives = 43/76 (56.58%), Query Frame = 0


Query: 6   GERNRQIQMAMEKLTKPSAYYDYEENDKSPSTLSECTICLEDLGERVSCRVFPNCKHIFH 65
           GER  Q Q A+EKL     Y     + +  S   +C+ICL+D  +   CRVFP CKHIFH
Sbjct: 74  GERREQRQEALEKLLPLVKYGSSSSSREILSNFGDCSICLDDYRDGEFCRVFPVCKHIFH 133

Query: 66  THCIINWLEINQTCPM 82
             CI +WL    TCP+
Sbjct: 134 VKCIDHWLNNQLTCPI 149

[Close]

BLAST of PI0001228 vs. ExPASy TrEMBL
Match: A0A2H5P674 (RING-type domain-containing protein OS=Citrus unshiu OX=55188 GN=CUMW_107580 PE=4 SV=1)

HSP 1 Score: 71.6 bits (174), Expect = 2.2e-09
Identity = 34/76 (44.74%), Postives = 43/76 (56.58%), Query Frame = 0


Query: 6   GERNRQIQMAMEKLTKPSAYYDYEENDKSPSTLSECTICLEDLGERVSCRVFPNCKHIFH 65
           GER  Q Q A+EKL     Y     + +  S   +C+ICL+D  +   CRVFP CKHIFH
Sbjct: 81  GERREQRQEALEKLLPLVKYGSSSSSREILSNFGDCSICLDDYRDGEFCRVFPVCKHIFH 140

Query: 66  THCIINWLEINQTCPM 82
             CI +WL    TCP+
Sbjct: 141 VKCIDHWLNNQLTCPI 156

[Close]

BLAST of PI0001228 vs. NCBI nr
Match: XP_011652743.1 (uncharacterized protein LOC105435076 [Cucumis sativus] >KGN56259.2 hypothetical protein Csa_011552 [Cucumis sativus])

HSP 1 Score: 162.2 bits (409), Expect = 2.5e-36
Identity = 73/85 (85.88%), Postives = 78/85 (91.76%), Query Frame = 0


Query: 1   MLLQPGERNRQIQMAMEKLTKPSAYYDYEENDKSPSTLSECTICLEDLGERVSCRVFPNC 60
           M+  P ERNRQ+QMAMEKLTKPSAYY+ EEND+SPSTLSECTICLEDLGERVSCRVFPNC
Sbjct: 183 MVADPEERNRQLQMAMEKLTKPSAYYNCEENDESPSTLSECTICLEDLGERVSCRVFPNC 242

Query: 61  KHIFHTHCIINWLEINQTCPMLNAK 86
           KHIFHTHCIINWLEINQTCP+   K
Sbjct: 243 KHIFHTHCIINWLEINQTCPICRTK 267

[Close]

BLAST of PI0001228 vs. NCBI nr
Match: KAG6577374.1 (RING-H2 finger protein ATL8, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 114.4 bits (285), Expect = 6.1e-22
Identity = 49/75 (65.33%), Postives = 60/75 (80.00%), Query Frame = 0


Query: 7   ERNRQIQMAMEKLTKPSAYYDYEENDKSPSTLSECTICLEDLGERVSCRVFPNCKHIFHT 66
           E NR IQ+AMEKLTKPS  YDYE+++++ S LS+C ICLE+      CRVFPNCKH+FHT
Sbjct: 64  EINRHIQIAMEKLTKPSTEYDYEKDNEAVSVLSQCAICLEEFENTDLCRVFPNCKHMFHT 123

Query: 67  HCIINWLEINQTCPM 82
           HCI+ WL INQTCP+
Sbjct: 124 HCIVRWLGINQTCPV 138

[Close]

BLAST of PI0001228 vs. NCBI nr
Match: XP_023545744.1 (RING-H2 finger protein ATL52-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 107.1 bits (266), Expect = 9.7e-20
Identity = 51/81 (62.96%), Postives = 57/81 (70.37%), Query Frame = 0


Query: 3   LQPGERNRQIQMAMEKLTKPSAYYDYEEND--KSPSTLSECTICLEDLGERVSCRVFPNC 62
           + P E N QI  AMEKLT P   Y  +END   + S L+EC ICLE  G RVSCRVFPNC
Sbjct: 77  VNPEELNHQIHRAMEKLTMPLVDYGCKENDGEVAGSELNECAICLEAFGNRVSCRVFPNC 136

Query: 63  KHIFHTHCIINWLEINQTCPM 82
           KH+FHTHCII WL IN TCP+
Sbjct: 137 KHMFHTHCIIKWLGINLTCPI 157

[Close]

BLAST of PI0001228 vs. NCBI nr
Match: KAG7031368.1 (RING-H2 finger protein ATL52, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 104.0 bits (258), Expect = 8.2e-19
Identity = 49/81 (60.49%), Postives = 55/81 (67.90%), Query Frame = 0


Query: 3   LQPGERNRQIQMAMEKLTKPSAYYDYEEND--KSPSTLSECTICLEDLGERVSCRVFPNC 62
           + P E N Q    MEKLT P   Y  +END   + S L+EC ICLE  G RVSCRVFPNC
Sbjct: 221 VNPEELNHQTHRVMEKLTMPLVDYGCKENDGEVASSELNECAICLEAFGNRVSCRVFPNC 280

Query: 63  KHIFHTHCIINWLEINQTCPM 82
           KH+FHTHCII WL IN TCP+
Sbjct: 281 KHMFHTHCIIKWLGINLTCPI 301

[Close]

BLAST of PI0001228 vs. NCBI nr
Match: KAG6600728.1 (putative RING-H2 finger protein ATL19, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 104.0 bits (258), Expect = 8.2e-19
Identity = 49/81 (60.49%), Postives = 55/81 (67.90%), Query Frame = 0


Query: 3   LQPGERNRQIQMAMEKLTKPSAYYDYEEND--KSPSTLSECTICLEDLGERVSCRVFPNC 62
           + P E N Q    MEKLT P   Y  +END   + S L+EC ICLE  G RVSCRVFPNC
Sbjct: 60  VNPEELNHQTHRVMEKLTMPLVDYGCKENDGEVASSELNECAICLEAFGNRVSCRVFPNC 119

Query: 63  KHIFHTHCIINWLEINQTCPM 82
           KH+FHTHCII WL IN TCP+
Sbjct: 120 KHMFHTHCIIKWLGINLTCPI 140

[Close]

BLAST of PI0001228 vs. TAIR 10
Match: AT3G05200.1 (RING/U-box superfamily protein )

HSP 1 Score: 57.8 bits (138), Expect = 6.3e-09
Identity = 25/65 (38.46%), Postives = 34/65 (52.31%), Query Frame = 0


Query: 20  TKPSAYYDYEENDKSPSTLSECTICLEDLGERVSCRVFPNCKHIFHTHCIINWLEINQTC 79
           T P+  Y   +  K      EC ICL +  +  + R+ P C H+FH HCI  WLE + TC
Sbjct: 107 TFPTFLYSDVKTQKLGKGELECAICLNEFEDDETLRLLPKCDHVFHPHCIDAWLEAHVTC 166

Query: 80  PMLNA 85
           P+  A
Sbjct: 167 PVCRA 171

[Close]

BLAST of PI0001228 vs. TAIR 10
Match: AT2G42350.1 (RING/U-box superfamily protein )

HSP 1 Score: 57.4 bits (137), Expect = 8.2e-09
Identity = 20/43 (46.51%), Postives = 28/43 (65.12%), Query Frame = 0


Query: 39  SECTICLEDLGERVSCRVFPNCKHIFHTHCIINWLEINQTCPM 82
           +EC +CL  L E+ + R+ PNCKH+FH  C+  WL    TCP+
Sbjct: 98  TECAVCLSLLEEKDNARMLPNCKHVFHVSCVDTWLTTQSTCPV 140

[Close]

BLAST of PI0001228 vs. TAIR 10
Match: AT2G35910.1 (RING/U-box superfamily protein )

HSP 1 Score: 57.0 bits (136), Expect = 1.1e-08
Identity = 23/49 (46.94%), Postives = 29/49 (59.18%), Query Frame = 0


Query: 33  KSPSTLSECTICLEDLGERVSCRVFPNCKHIFHTHCIINWLEINQTCPM 82
           K P+T S C ICL D   +   R  P+C H+FH  CI  WL +N TCP+
Sbjct: 139 KGPTTASCCAICLGDYKGKHLLRQLPDCNHLFHLKCIDTWLRLNPTCPV 187

[Close]

BLAST of PI0001228 vs. TAIR 10
Match: AT5G06490.1 (RING/U-box superfamily protein )

HSP 1 Score: 56.2 bits (134), Expect = 1.8e-08
Identity = 22/49 (44.90%), Postives = 31/49 (63.27%), Query Frame = 0


Query: 33  KSPSTLSECTICLEDLGERVSCRVFPNCKHIFHTHCIINWLEINQTCPM 82
           K  ST S C+ICL D  +    RV P+C H+FH +C+  WL ++ TCP+
Sbjct: 121 KESSTTSCCSICLADYKKMDMIRVLPDCNHLFHDNCVDPWLRLHPTCPV 169

[Close]

BLAST of PI0001228 vs. TAIR 10
Match: AT1G53010.1 (RING/U-box superfamily protein )

HSP 1 Score: 55.8 bits (133), Expect = 2.4e-08
Identity = 23/54 (42.59%), Postives = 32/54 (59.26%), Query Frame = 0


Query: 27  DYEENDKSPSTLSECTICLEDLGERVSCRVFPNCKHIFHTHCIINWLEINQTCP 81
           ++EE+++      EC ICL        CRVFP C+HI+H  CI  WL+ + TCP
Sbjct: 116 NHEEDEEKSLESRECAICLSGYVVNEECRVFPVCRHIYHALCIDAWLKNHLTCP 169

The following BLAST results are available for this feature:

BLAST of PI0001228 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8LF65	8.8e-08	43.48	RING-H2 finger protein ATL17 OS=Arabidopsis thaliana OX=3702 GN=ATL17 PE=2 SV=2	[more]
Q8RXX9	8.8e-08	38.46	E3 ubiquitin-protein ligase ATL6 OS=Arabidopsis thaliana OX=3702 GN=ATL6 PE=1 SV...	[more]
Q9SLC4	1.2e-07	46.51	RING-H2 finger protein ATL40 OS=Arabidopsis thaliana OX=3702 GN=ATL40 PE=2 SV=1	[more]
Q8RX29	1.5e-07	46.94	RING-H2 finger protein ATL70 OS=Arabidopsis thaliana OX=3702 GN=ATL70 PE=2 SV=1	[more]
Q9FG21	2.6e-07	44.90	Putative RING-H2 finger protein ATL71 OS=Arabidopsis thaliana OX=3702 GN=ATL71 P...	[more]

BLAST of PI0001228 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L7Y8	1.2e-39	83.67	RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G104940 P...	[more]
V4WEW6	1.7e-09	44.74	RING-type domain-containing protein OS=Citrus clementina OX=85681 GN=CICLE_v1001...	[more]
A0A5D2W4C4	1.7e-09	52.17	RING-type domain-containing protein OS=Gossypium mustelinum OX=34275 GN=E1A91_D0...	[more]
A0A067FG84	2.2e-09	44.74	RING-type domain-containing protein OS=Citrus sinensis OX=2711 GN=CISIN_1g035583...	[more]
A0A2H5P674	2.2e-09	44.74	RING-type domain-containing protein OS=Citrus unshiu OX=55188 GN=CUMW_107580 PE=...	[more]

BLAST of PI0001228 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011652743.1	2.5e-36	85.88	uncharacterized protein LOC105435076 [Cucumis sativus] >KGN56259.2 hypothetical ...	[more]
KAG6577374.1	6.1e-22	65.33	RING-H2 finger protein ATL8, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_023545744.1	9.7e-20	62.96	RING-H2 finger protein ATL52-like [Cucurbita pepo subsp. pepo]	[more]
KAG7031368.1	8.2e-19	60.49	RING-H2 finger protein ATL52, partial [Cucurbita argyrosperma subsp. argyrosperm...	[more]
KAG6600728.1	8.2e-19	60.49	putative RING-H2 finger protein ATL19, partial [Cucurbita argyrosperma subsp. so...	[more]

BLAST of PI0001228 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G05200.1	6.3e-09	38.46	RING/U-box superfamily protein	[more]
AT2G42350.1	8.2e-09	46.51	RING/U-box superfamily protein	[more]
AT2G35910.1	1.1e-08	46.94	RING/U-box superfamily protein	[more]
AT5G06490.1	1.8e-08	44.90	RING/U-box superfamily protein	[more]
AT1G53010.1	2.4e-08	42.59	RING/U-box superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 41..82 e-value: 4.2E-4 score: 29.6
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 40..81 e-value: 2.7E-11 score: 43.6
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 41..83 score: 10.92546
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 4..86 e-value: 3.9E-17 score: 63.7
None	No IPR available	PANTHER	PTHR45798	RING-H2 FINGER PROTEIN ATL61-RELATED-RELATED	coord: 10..81
None	No IPR available	PANTHER	PTHR45798:SF62	RING-H2 FINGER PROTEIN ATL3-LIKE	coord: 10..81
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 40..81

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0001228.1	PI0001228.1	mRNA