PI0001122 (gene) Melon (PI 482460) v1

Overview


Name	PI0001122
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	Leucine-rich repeat family protein
Location	chr01: 620841 .. 623338 (-)
RNA-Seq Expression	PI0001122
Synteny	PI0001122

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CATACACAGAGACACATATTTCCAGAACGGCCCACAAGTGAAAATGGCCACAACCTCTGCTTTTGCATTTTTATCCATCTTTATCTCCTCCTCTTCTCCACATTTTCCGCTGTCGCCCTCGATATCGGTATCGGCATCGGCATCGGCGGCAATGGAAAGACCCCTCCGCCGTCGGAATCCCCTGATTGCAACACTCCACCACCTCCTCCACCACCACCCTCCTCCTCCATCACCTCCTCCTCCACCACCACCACCCCCACTTCCTCCTCCTCCTTCTCCGTCATCGCCATCACCACCGCTGCCAAAGCCGCCAAAAAAGCAACCACCACCGACCTCCCCAGAAAATCCTCCAAGAAGCCGCCGGCGCTGCGATTTGAGAGCGAGAGAATTAAAATTGCGTATTATGTGATAAAAACTACAAAAGTAGAATCGAGAATGACCCATGGCAGGTTAAGAAAACATGGGTTGGGACAAACGTTTGTACGTACAAAGGATTCAGTTGCGACGAAGTTCCCAATTACGGAAAACAGAGAGGGTTTTCGGGCCTTAGCTTCAACAATTTCAATTTCAGTGGCCGAAGATTGAGCCTCGATGGGCTAGTGGAAAAGCTGCCGGATCTCACATTCTTCCATGCAAATTCAAACTTCTTCTTCTCCACCATCCCCAAACTCATCTCCACTGTCAATTTCTTTTACGAGCTCGATCTTAGCAATAACAAATTACAGGGCCGTTCCCCGGTGAAGTCCTCGGCGCCGTTAATCTGACGTTCTTGGACATCCGGTTCAATAACTATTACGGTCCGATTCGGTCTGAGTTGTTTGATATGGATATTATCACCGCCATCTTCCTCAACAACAATAAGTTTAATCAGGACATTCCGGCCAACCTCGGCAACACCCCTGCTCGGTACCATATTTCCTCAAACTTTTCTCTTTTTTTCTCAAACCTAATATTTTGGGAAATTACAGAAACAACACAACTCTAGTGCTAATGGTAACTGCAATTACACATTAAAATTTATACAACTCAATTAAATTTCAACTCTCAAACATATATTAATTATATAATTGTAAAAATTTACACAATTATGTTAGGATCTAATTTTAATATTTCCATAAGTTTGAGGATCACTTTTTACCAATAAAATTTGATAATGTAATTGCAACTACTACCATAACCTAAAGATGGTTTTTATGTCAAAAATTTATTTAAACATTTACCATAACCTAAAGATGGTTTTTATGTCAAAAATTTATTTAAACATTTATCAAAAAAAAAAATTGGATAAGGTGAATTTTAACTTAAATCTCATCAATTTTTCCAATAATTCAAAAGTTTAGAAGGTACATTATTTAAAAAATATCATTTATTTTTCTTAATTTCCTTTTAATCTTATATTATTGACTTGAGTATACACTTATTTTACTTAGTCTGTGATTTTTTTTTTATAATACCTATTTTGATAAATTAAATTATTTATGTCTATTTTAGTAATCATTATTTTATTTTCCAAACATATGGATATCCTAACTTGAATATATATCTCAAAGTGATGAAATGGACATGATACCTTGGCCAAATCAGGTAGCCACCAAAACAAACACACACCTCTAATCCAGTTTTTTAAACATTTTAAAACATACAAAAACACTTGAGTGAAACTAAAATTAAAATTAAAGGTGAAAAGAGTAAATAACACAAGTTTGAATTAACAATTAACTAGATTAATAGTTTCCCTGATTAATGAATCATTTTCTGTAGGTACCTAACATTCACGAGCAATGAGTTCACCGGCCCAATCCCAAAAAGCATCGGAATCGGAAAAACAAAGAAGACCTAATCGAAGTTCTATTCTCCGACAACAAGCTTTCCGGCTGCTTACCGATGGAGATCGGTCTCTTAGAGAACACCATTCTCTTCAACGCAAGCAAAAACTACCTCACCGGCCCAATCCCATACTCCTTTTGCTGCTTAACCAAAATGCAGATTCTCATTTTCTCCGACAACAACTTATACGGCGCCGTTCCGGAGGACGTCTGTAAATTACCAAACCTTCAAAGTTTCAACCTTCGCAACAATTTCTTCACCCAAGTCGGCCCCGTCTGCCGGAGCTTGATCTGGAAGAAGGTTCTAGACGTTTCTGGAAACTGCATTTTGGGTTTGCCCAAACAGAAGTCGGAGAAGGAATGTACGTACTTCTTTAGCAAAGCTCATTCTTGTCCTGATGAAAAGTCTATGAAGATTATCCCTTGTAAGGCTACGGATTACCAGCCCCATCCAGCGCCGCCGAGGAAGCTGACGGAGATGAGAACTTATGCTGCTCTTATTCCTAATTGATTTTATGTCTATTACTATTATTGTAATTCCTTATTTTGTGTCTATTATATTATATTGCATCTCTACTTTTAATTTTAATTTCAACTTATGTTTTTTCAATCAATCTTTGCATAAGAACTTGTATTATCAATTTCTAAGATTAAAATTTGTGTACTAAGTAA

mRNA sequence

CATACACAGAGACACATATTTCCAGAACGGCCCACAAGTGAAAATGGCCACAACCTCTGCTTTTGCATTTTTATCCATCTTTATCTCCTCCTCTTCTCCACATTTTCCGCTGTCGCCCTCGATATCGGTATCGGCATCGGCATCGGCGGCAATGGAAAGACCCCTCCGCCGTCGGAATCCCCTGATTGCAACACTCCACCACCTCCTCCACCACCACCCTCCTCCTCCATCACCTCCTCCTCCACCACCACCACCCCCACTTCCTCCTCCTCCTTCTCCGTCATCGCCATCACCACCGCTGCCAAAGCCGCCAAAAAAGCAACCACCACCGACCTCCCCAGAAAATCCTCCAAGAAGCCGCCGGCGCTGCGATTTGAGAGCGAGAGAATTAAAATTGCGTATTATGTGATAAAAACTACAAAAGTAGAATCGAGAATGACCCATGGCAGGTTAAGAAAACATGGGTTGGGACAAACGTTTGTACGTACAAAGGATTCAGTTGCGACGAAGTTCCCAATTACGGAAAACAGAGAGGGTTTTCGGGCCTTAGCTTCAACAATTTCAATTTCAGTGGCCGAAGATTGAGCCTCGATGGGCTAGTGGAAAAGCTGCCGGATCTCACATTCTTCCATGCAAATTCAAACTTCTTCTTCTCCACCATCCCCAAACTCATCTCCACTGTCAATTTCTTTTACGAGCTCGATCTTAGCAATAACAAATTACAGGGCCGTTCCCCGGTGAAGTCCTCGGCGCCGTTAATCTGACGTTCTTGGACATCCGGTTCAATAACTATTACGGTCCGATTCGGTCTGAGTTGTTTGATATGGATATTATCACCGCCATCTTCCTCAACAACAATAAGTTTAATCAGGACATTCCGGCCAACCTCGGCAACACCCCTGCTCGGTACCTAACATTCACGAGCAATGAGTTCACCGGCCCAATCCCAAAAAGCATCGGAATCGGAAAAACAAAGAAGACCTAATCGAAGTTCTATTCTCCGACAACAAGCTTTCCGGCTGCTTACCGATGGAGATCGGTCTCTTAGAGAACACCATTCTCTTCAACGCAAGCAAAAACTACCTCACCGGCCCAATCCCATACTCCTTTTGCTGCTTAACCAAAATGCAGATTCTCATTTTCTCCGACAACAACTTATACGGCGCCGTTCCGGAGGACGTCTGTAAATTACCAAACCTTCAAAGTTTCAACCTTCGCAACAATTTCTTCACCCAAGTCGGCCCCGTCTGCCGGAGCTTGATCTGGAAGAAGGTTCTAGACGTTTCTGGAAACTGCATTTTGGGTTTGCCCAAACAGAAGTCGGAGAAGGAATGTACGTACTTCTTTAGCAAAGCTCATTCTTGTCCTGATGAAAAGTCTATGAAGATTATCCCTTGTAAGGCTACGGATTACCAGCCCCATCCAGCGCCGCCGAGGAAGCTGACGGAGATGAGAACTTATGCTGCTCTTATTCCTAATTGATTTTATGTCTATTACTATTATTGTAATTCCTTATTTTGTGTCTATTATATTATATTGCATCTCTACTTTTAATTTTAATTTCAACTTATGTTTTTTCAATCAATCTTTGCATAAGAACTTGTATTATCAATTTCTAAGATTAAAATTTGTGTACTAAGTAA

Coding sequence (CDS)

ATGGAGATCGGTCTCTTAGAGAACACCATTCTCTTCAACGCAAGCAAAAACTACCTCACCGGCCCAATCCCATACTCCTTTTGCTGCTTAACCAAAATGCAGATTCTCATTTTCTCCGACAACAACTTATACGGCGCCGTTCCGGAGGACGTCTGTAAATTACCAAACCTTCAAAGTTTCAACCTTCGCAACAATTTCTTCACCCAAGTCGGCCCCGTCTGCCGGAGCTTGATCTGGAAGAAGGTTCTAGACGTTTCTGGAAACTGCATTTTGGGTTTGCCCAAACAGAAGTCGGAGAAGGAATGTACGTACTTCTTTAGCAAAGCTCATTCTTGTCCTGATGAAAAGTCTATGAAGATTATCCCTTGTAAGGCTACGGATTACCAGCCCCATCCAGCGCCGCCGAGGAAGCTGACGGAGATGAGAACTTATGCTGCTCTTATTCCTAATTGA

Protein sequence

MEIGLLENTILFNASKNYLTGPIPYSFCCLTKMQILIFSDNNLYGAVPEDVCKLPNLQSFNLRNNFFTQVGPVCRSLIWKKVLDVSGNCILGLPKQKSEKECTYFFSKAHSCPDEKSMKIIPCKATDYQPHPAPPRKLTEMRTYAALIPN

Homology

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BLAST of PI0001122 vs. ExPASy Swiss-Prot
Match: Q8W3M4 (Uncharacterized protein At4g06744 OS=Arabidopsis thaliana OX=3702 GN=At4g06744 PE=2 SV=1)

HSP 1 Score: 107.8 bits (268), Expect = 1.1e-22
Identity = 56/116 (48.28%), Postives = 71/116 (61.21%), Query Frame = 0


Query: 2   EIGLLENTILFNASKNYLTGPIPYSFCCLTKMQILIFSDNNLYGAVPEDVCKL--PNLQS 61
           EIG L    + +   N LTGP+P S  CL K++ L F+ N L+GAVPE VC L   NL +
Sbjct: 258 EIGFLTGASVIDIGGNKLTGPLPLSLMCLEKVEQLNFAGNLLFGAVPEAVCMLLRDNLVN 317

Query: 62  FNLRNNFFTQVGPVCRSLIWKKVLDVSGNCILGLPKQKSEKECTYFF--SKAHSCP 114
            +L +N+FT VGP CR L+ K VLDV  NCI   P Q+S +EC  FF   K + CP
Sbjct: 318 LSLSDNYFTHVGPWCRGLLEKGVLDVGNNCIPFFPGQRSMQECAEFFVKPKKYYCP 373

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BLAST of PI0001122 vs. ExPASy Swiss-Prot
Match: Q9XIL9 (Pollen-specific leucine-rich repeat extensin-like protein 3 OS=Arabidopsis thaliana OX=3702 GN=PEX3 PE=2 SV=1)

HSP 1 Score: 90.5 bits (223), Expect = 1.7e-17
Identity = 54/140 (38.57%), Postives = 72/140 (51.43%), Query Frame = 0


Query: 2   EIGLLENTILFNASKNYLTGPIPYSFCCLTKMQILIFSDNNLYGAVPEDVCKLPNLQSFN 61
           EIG L N  +F+AS N  TG +P SF  LT M+    S N L G +PE++CKLP L +  
Sbjct: 269 EIGKLANVNVFDASMNSFTGVLPPSFVGLTSMEEFDISGNKLTGFIPENICKLPKLVNLT 328

Query: 62  LRNNFFTQVGPVCRSLIWKKV-LDVSGNCILGLPKQKSEKECTYFFSKAHSCPDEK---- 121
              N+F   G  C     K++ LD + NC+   PKQ+S KEC    S+   C  +K    
Sbjct: 329 YAYNYFNGQGDSCVPGSQKQIALDDTRNCLPDRPKQRSAKECAVVISRPVDCSKDKCAGG 388

Query: 122 SMKIIPCKATDYQPHPAPPR 137
           S +  P K+    P P P R
Sbjct: 389 SSQATPSKS----PSPVPTR 404

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BLAST of PI0001122 vs. ExPASy Swiss-Prot
Match: Q9LHF1 (Leucine-rich repeat extensin-like protein 4 OS=Arabidopsis thaliana OX=3702 GN=LRX4 PE=1 SV=1)

HSP 1 Score: 84.0 bits (206), Expect = 1.6e-15
Identity = 47/140 (33.57%), Postives = 70/140 (50.00%), Query Frame = 0


Query: 2   EIGLLENTILFNASKNYLTGPIPYSFCCLTKMQILIFSDNNLYGAVPEDVCKLPNLQSFN 61
           +IG L+N  +F+ S N L GP+P S   + +++ L  + N L G +P  +C+LP L++F 
Sbjct: 283 DIGRLKNVTVFDVSFNELVGPLPESVGGMVEVEQLNVAHNLLSGKIPASICQLPKLENFT 342

Query: 62  LRNNFFTQVGPVCRSLIWKKVLDVSGNCILGLPKQKSEKECTYFFSK------AHSCPDE 121
              NFFT   PVC  L      D   NC+ G P Q+S ++C+ F S+      +  C   
Sbjct: 343 YSYNFFTGEAPVCLRL---SEFDDRRNCLPGRPAQRSSRQCSAFLSRPSVDCGSFGCGRS 402

Query: 122 KSMKIIPCKATDYQPHPAPP 136
                 P  A    P P+PP
Sbjct: 403 VVKPSPPIVALPPPPPPSPP 419

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BLAST of PI0001122 vs. ExPASy Swiss-Prot
Match: O81765 (Pollen-specific leucine-rich repeat extensin-like protein 4 OS=Arabidopsis thaliana OX=3702 GN=PEX4 PE=2 SV=1)

HSP 1 Score: 84.0 bits (206), Expect = 1.6e-15
Identity = 50/145 (34.48%), Postives = 73/145 (50.34%), Query Frame = 0


Query: 2   EIGLLENTILFNASKNYLTGPIPYSFCCLTKMQILIFSDNNLYGAVPEDVCKLPNLQSFN 61
           EIG L N  +F+ASKN   G +P SF  LT ++ +  S N L G VP ++C+LPNL +  
Sbjct: 295 EIGKLSNVTVFDASKNSFIGRLPTSFVGLTSVEEIDISGNKLTGLVPHNICQLPNLVNLT 354

Query: 62  LRNNFFTQVGPVCRSLIWKK--VLDVSGNCILGLPKQKSEKECTYFFSKAHSCPDEKSMK 121
              N+F+  G  C     +K   LD + NC+   P+Q+S +EC    ++   C  +K   
Sbjct: 355 YSYNYFSGQGGSCVPGGSRKEIALDDTRNCLASRPEQRSAQECAVVINRPVDCSKDK--- 414

Query: 122 IIPCKATDYQP-HPAPPRKLTEMRT 144
              C      P  P+P  K T + T
Sbjct: 415 ---CAGGSSTPSKPSPVHKPTPVPT 433

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BLAST of PI0001122 vs. ExPASy Swiss-Prot
Match: O48809 (Leucine-rich repeat extensin-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=LRX2 PE=1 SV=1)

HSP 1 Score: 82.4 bits (202), Expect = 4.7e-15
Identity = 49/149 (32.89%), Postives = 77/149 (51.68%), Query Frame = 0


Query: 2   EIGLLENTILFNASKNYLTGPIPYSFCCLTKMQILIFSDNNLYGAVPEDVCKLPNLQSFN 61
           +IG L+N  +F+ S N L+GP+P S   +  ++ L  ++N   G +P  +C+L NL++F 
Sbjct: 263 QIGNLKNVTVFDISFNRLSGPLPSSIGNMKSLEQLNVANNRFTGVIPSSICQLSNLENFT 322

Query: 62  LRNNFFTQVGPVCRSLIWKK-VLDVSGNCILGLPKQKSEKECTYFFSKAHSC-------- 121
             +NFFT   P C +L+    V++ S NCI G   Q+S KEC+   S++  C        
Sbjct: 323 YSSNFFTGDAPRCVALLGDNVVVNGSMNCIDGKEDQRSSKECSSPASRSVDCSKFGCNNF 382

Query: 122 --PDEKSMKIIPCKATDYQPHPAPPRKLT 140
             P   S K+ P       P P P  K++
Sbjct: 383 FSPPPPSFKMSP--TVRVLPPPPPSSKMS 409

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BLAST of PI0001122 vs. ExPASy TrEMBL
Match: A0A5A7SP18 (Leucine-rich repeat extensin-like protein 3 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold13G00740 PE=4 SV=1)

HSP 1 Score: 300.8 bits (769), Expect = 3.1e-78
Identity = 138/150 (92.00%), Postives = 143/150 (95.33%), Query Frame = 0


Query: 1   MEIGLLENTILFNASKNYLTGPIPYSFCCLTKMQILIFSDNNLYGAVPEDVCKLPNLQSF 60
           MEIGLLENT+LFNASKN LTGPIPYSFCCLTKMQIL FSDNNLYGAVPEDVCKLPNLQ F
Sbjct: 316 MEIGLLENTVLFNASKNSLTGPIPYSFCCLTKMQILNFSDNNLYGAVPEDVCKLPNLQRF 375

Query: 61  NLRNNFFTQVGPVCRSLIWKKVLDVSGNCILGLPKQKSEKECTYFFSKAHSCPDEKSMKI 120
           NLRNNFFTQVGP+CRSLIWK VLDVSGNCILGLPKQ+ EKECTYFFSK HSCPD+KSMKI
Sbjct: 376 NLRNNFFTQVGPICRSLIWKDVLDVSGNCILGLPKQRPEKECTYFFSKPHSCPDDKSMKI 435

Query: 121 IPCKATDYQPHPAPPRKLTEMRTYAALIPN 151
           IPCKATDY+PHP PPRKLTEMRTYAALIPN
Sbjct: 436 IPCKATDYRPHPPPPRKLTEMRTYAALIPN 465

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BLAST of PI0001122 vs. ExPASy TrEMBL
Match: A0A1S3C0I8 (uncharacterized protein At4g06744-like OS=Cucumis melo OX=3656 GN=LOC103495255 PE=4 SV=1)

HSP 1 Score: 300.8 bits (769), Expect = 3.1e-78
Identity = 138/150 (92.00%), Postives = 143/150 (95.33%), Query Frame = 0


Query: 1   MEIGLLENTILFNASKNYLTGPIPYSFCCLTKMQILIFSDNNLYGAVPEDVCKLPNLQSF 60
           MEIGLLENT+LFNASKN LTGPIPYSFCCLTKMQIL FSDNNLYGAVPEDVCKLPNLQ F
Sbjct: 279 MEIGLLENTVLFNASKNSLTGPIPYSFCCLTKMQILNFSDNNLYGAVPEDVCKLPNLQRF 338

Query: 61  NLRNNFFTQVGPVCRSLIWKKVLDVSGNCILGLPKQKSEKECTYFFSKAHSCPDEKSMKI 120
           NLRNNFFTQVGP+CRSLIWK VLDVSGNCILGLPKQ+ EKECTYFFSK HSCPD+KSMKI
Sbjct: 339 NLRNNFFTQVGPICRSLIWKDVLDVSGNCILGLPKQRPEKECTYFFSKPHSCPDDKSMKI 398

Query: 121 IPCKATDYQPHPAPPRKLTEMRTYAALIPN 151
           IPCKATDY+PHP PPRKLTEMRTYAALIPN
Sbjct: 399 IPCKATDYRPHPPPPRKLTEMRTYAALIPN 428

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BLAST of PI0001122 vs. ExPASy TrEMBL
Match: A0A0A0K2K4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G073410 PE=4 SV=1)

HSP 1 Score: 280.4 bits (716), Expect = 4.4e-72
Identity = 132/151 (87.42%), Postives = 137/151 (90.73%), Query Frame = 0


Query: 1   MEIGLLENTILFNASKNYLTGPIPYSFCCLTKMQILIFSDNNLYGAVPEDVCKLPNLQSF 60
           MEIGLLENT+LFNASKN LTGPIPYSFCCLTKM+IL F  NNLYGA+PEDVCKLPNLQ F
Sbjct: 318 MEIGLLENTVLFNASKNCLTGPIPYSFCCLTKMEILNFFGNNLYGAIPEDVCKLPNLQKF 377

Query: 61  NLRNNFFTQVGPVCRSLIWKKVLDVSGNCILGLPKQKSEKECTYFFSKAHSCPDEKSMKI 120
           NL NNF TQVGPVCRSLIWK +LDVSGNCILGLPKQ+ EKECT FFSKAHSCPDEKSMKI
Sbjct: 378 NLSNNFITQVGPVCRSLIWKNILDVSGNCILGLPKQRPEKECTNFFSKAHSCPDEKSMKI 437

Query: 121 IPCKATD-YQPHPAPPRKLTEMRTYAALIPN 151
           IPCKATD YQ HP PPRKLTEMRT AALIPN
Sbjct: 438 IPCKATDYYQSHPPPPRKLTEMRTTAALIPN 468

[Close]

BLAST of PI0001122 vs. ExPASy TrEMBL
Match: A0A6J1I5U8 (uncharacterized protein At4g06744-like OS=Cucurbita maxima OX=3661 GN=LOC111470957 PE=4 SV=1)

HSP 1 Score: 240.7 bits (613), Expect = 3.8e-60
Identity = 117/157 (74.52%), Postives = 129/157 (82.17%), Query Frame = 0


Query: 1   MEIGLLENTILFNASKNYLTGPIPYSFCCLTKMQILIFSDNNLYGAVPEDVCKLPNLQSF 60
           MEIG LENTILF+ASKN LTGPIPYSF CL KM++L F++N LYGAVPE VCKLPNLQ+F
Sbjct: 319 MEIGQLENTILFDASKNTLTGPIPYSFACLAKMEVLNFANNRLYGAVPEAVCKLPNLQNF 378

Query: 61  NLRNNFFTQVGPVCRSLIWKKVLDVSGNCILGLPKQKSEKECTYFFSKAHSCPDEKSMKI 120
            L NNF TQVGPVCRSLI +K+LDVSGNCILGLP Q+SEKEC+YFFSK HSC DEKSMK 
Sbjct: 379 TLYNNFLTQVGPVCRSLIGRKILDVSGNCILGLPGQRSEKECSYFFSKVHSCSDEKSMKY 438

Query: 121 IPCKATDY-------QPHPAPPRKLTEMRTYAALIPN 151
           IPC A  Y        P P PPRK+TEMRTYAAL+PN
Sbjct: 439 IPCTANKYLYGNPTAGPLP-PPRKMTEMRTYAALVPN 474

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BLAST of PI0001122 vs. ExPASy TrEMBL
Match: A0A6J1GJ99 (uncharacterized protein At4g06744-like OS=Cucurbita moschata OX=3662 GN=LOC111454839 PE=4 SV=1)

HSP 1 Score: 239.2 bits (609), Expect = 1.1e-59
Identity = 116/157 (73.89%), Postives = 128/157 (81.53%), Query Frame = 0


Query: 1   MEIGLLENTILFNASKNYLTGPIPYSFCCLTKMQILIFSDNNLYGAVPEDVCKLPNLQSF 60
           MEIG LENTILF+ASKN LTGPIPYSF CL KM++L F++N LYG VPE VCKLPNLQ+F
Sbjct: 317 MEIGQLENTILFDASKNTLTGPIPYSFACLAKMEVLNFANNRLYGTVPEAVCKLPNLQNF 376

Query: 61  NLRNNFFTQVGPVCRSLIWKKVLDVSGNCILGLPKQKSEKECTYFFSKAHSCPDEKSMKI 120
            L NNF TQVGPVCRSLI +K+LDVSGNCILGLP Q+SEKEC+YFFSK HSC DEKSMK 
Sbjct: 377 TLYNNFLTQVGPVCRSLIGRKILDVSGNCILGLPGQRSEKECSYFFSKVHSCSDEKSMKY 436

Query: 121 IPCKATDY-------QPHPAPPRKLTEMRTYAALIPN 151
           IPC A  Y        P P PPRK+TEMRTYAAL+PN
Sbjct: 437 IPCTANKYLYGDPTAGPLP-PPRKMTEMRTYAALVPN 472

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BLAST of PI0001122 vs. NCBI nr
Match: KAA0031321.1 (leucine-rich repeat extensin-like protein 3 [Cucumis melo var. makuwa] >TYK06772.1 leucine-rich repeat extensin-like protein 3 [Cucumis melo var. makuwa])

HSP 1 Score: 300.8 bits (769), Expect = 6.5e-78
Identity = 138/150 (92.00%), Postives = 143/150 (95.33%), Query Frame = 0


Query: 1   MEIGLLENTILFNASKNYLTGPIPYSFCCLTKMQILIFSDNNLYGAVPEDVCKLPNLQSF 60
           MEIGLLENT+LFNASKN LTGPIPYSFCCLTKMQIL FSDNNLYGAVPEDVCKLPNLQ F
Sbjct: 316 MEIGLLENTVLFNASKNSLTGPIPYSFCCLTKMQILNFSDNNLYGAVPEDVCKLPNLQRF 375

Query: 61  NLRNNFFTQVGPVCRSLIWKKVLDVSGNCILGLPKQKSEKECTYFFSKAHSCPDEKSMKI 120
           NLRNNFFTQVGP+CRSLIWK VLDVSGNCILGLPKQ+ EKECTYFFSK HSCPD+KSMKI
Sbjct: 376 NLRNNFFTQVGPICRSLIWKDVLDVSGNCILGLPKQRPEKECTYFFSKPHSCPDDKSMKI 435

Query: 121 IPCKATDYQPHPAPPRKLTEMRTYAALIPN 151
           IPCKATDY+PHP PPRKLTEMRTYAALIPN
Sbjct: 436 IPCKATDYRPHPPPPRKLTEMRTYAALIPN 465

[Close]

BLAST of PI0001122 vs. NCBI nr
Match: XP_008454972.1 (PREDICTED: uncharacterized protein At4g06744-like [Cucumis melo])

HSP 1 Score: 300.8 bits (769), Expect = 6.5e-78
Identity = 138/150 (92.00%), Postives = 143/150 (95.33%), Query Frame = 0


Query: 1   MEIGLLENTILFNASKNYLTGPIPYSFCCLTKMQILIFSDNNLYGAVPEDVCKLPNLQSF 60
           MEIGLLENT+LFNASKN LTGPIPYSFCCLTKMQIL FSDNNLYGAVPEDVCKLPNLQ F
Sbjct: 279 MEIGLLENTVLFNASKNSLTGPIPYSFCCLTKMQILNFSDNNLYGAVPEDVCKLPNLQRF 338

Query: 61  NLRNNFFTQVGPVCRSLIWKKVLDVSGNCILGLPKQKSEKECTYFFSKAHSCPDEKSMKI 120
           NLRNNFFTQVGP+CRSLIWK VLDVSGNCILGLPKQ+ EKECTYFFSK HSCPD+KSMKI
Sbjct: 339 NLRNNFFTQVGPICRSLIWKDVLDVSGNCILGLPKQRPEKECTYFFSKPHSCPDDKSMKI 398

Query: 121 IPCKATDYQPHPAPPRKLTEMRTYAALIPN 151
           IPCKATDY+PHP PPRKLTEMRTYAALIPN
Sbjct: 399 IPCKATDYRPHPPPPRKLTEMRTYAALIPN 428

[Close]

BLAST of PI0001122 vs. NCBI nr
Match: XP_004137106.2 (uncharacterized protein At4g06744 [Cucumis sativus] >KGN43905.1 hypothetical protein Csa_017097 [Cucumis sativus])

HSP 1 Score: 280.4 bits (716), Expect = 9.0e-72
Identity = 132/151 (87.42%), Postives = 137/151 (90.73%), Query Frame = 0


Query: 1   MEIGLLENTILFNASKNYLTGPIPYSFCCLTKMQILIFSDNNLYGAVPEDVCKLPNLQSF 60
           MEIGLLENT+LFNASKN LTGPIPYSFCCLTKM+IL F  NNLYGA+PEDVCKLPNLQ F
Sbjct: 318 MEIGLLENTVLFNASKNCLTGPIPYSFCCLTKMEILNFFGNNLYGAIPEDVCKLPNLQKF 377

Query: 61  NLRNNFFTQVGPVCRSLIWKKVLDVSGNCILGLPKQKSEKECTYFFSKAHSCPDEKSMKI 120
           NL NNF TQVGPVCRSLIWK +LDVSGNCILGLPKQ+ EKECT FFSKAHSCPDEKSMKI
Sbjct: 378 NLSNNFITQVGPVCRSLIWKNILDVSGNCILGLPKQRPEKECTNFFSKAHSCPDEKSMKI 437

Query: 121 IPCKATD-YQPHPAPPRKLTEMRTYAALIPN 151
           IPCKATD YQ HP PPRKLTEMRT AALIPN
Sbjct: 438 IPCKATDYYQSHPPPPRKLTEMRTTAALIPN 468

[Close]

BLAST of PI0001122 vs. NCBI nr
Match: XP_022972386.1 (uncharacterized protein At4g06744-like [Cucurbita maxima])

HSP 1 Score: 240.7 bits (613), Expect = 7.9e-60
Identity = 117/157 (74.52%), Postives = 129/157 (82.17%), Query Frame = 0


Query: 1   MEIGLLENTILFNASKNYLTGPIPYSFCCLTKMQILIFSDNNLYGAVPEDVCKLPNLQSF 60
           MEIG LENTILF+ASKN LTGPIPYSF CL KM++L F++N LYGAVPE VCKLPNLQ+F
Sbjct: 319 MEIGQLENTILFDASKNTLTGPIPYSFACLAKMEVLNFANNRLYGAVPEAVCKLPNLQNF 378

Query: 61  NLRNNFFTQVGPVCRSLIWKKVLDVSGNCILGLPKQKSEKECTYFFSKAHSCPDEKSMKI 120
            L NNF TQVGPVCRSLI +K+LDVSGNCILGLP Q+SEKEC+YFFSK HSC DEKSMK 
Sbjct: 379 TLYNNFLTQVGPVCRSLIGRKILDVSGNCILGLPGQRSEKECSYFFSKVHSCSDEKSMKY 438

Query: 121 IPCKATDY-------QPHPAPPRKLTEMRTYAALIPN 151
           IPC A  Y        P P PPRK+TEMRTYAAL+PN
Sbjct: 439 IPCTANKYLYGNPTAGPLP-PPRKMTEMRTYAALVPN 474

[Close]

BLAST of PI0001122 vs. NCBI nr
Match: XP_023553810.1 (uncharacterized protein At4g06744-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 240.7 bits (613), Expect = 7.9e-60
Identity = 117/157 (74.52%), Postives = 129/157 (82.17%), Query Frame = 0


Query: 1   MEIGLLENTILFNASKNYLTGPIPYSFCCLTKMQILIFSDNNLYGAVPEDVCKLPNLQSF 60
           MEIG LENTILF+ASKN LTGPIPYSF CL KM++L F++N LYGAVPE VCKLPNLQ+F
Sbjct: 319 MEIGQLENTILFDASKNTLTGPIPYSFACLAKMEVLNFANNRLYGAVPEAVCKLPNLQNF 378

Query: 61  NLRNNFFTQVGPVCRSLIWKKVLDVSGNCILGLPKQKSEKECTYFFSKAHSCPDEKSMKI 120
            L NNF TQVGPVCRSLI +K+LDVSGNCILGLP Q+SEKEC+YFFSK HSC DEKSMK 
Sbjct: 379 TLYNNFLTQVGPVCRSLIGRKILDVSGNCILGLPGQRSEKECSYFFSKVHSCSDEKSMKY 438

Query: 121 IPCKATDY-------QPHPAPPRKLTEMRTYAALIPN 151
           IPC A  Y        P P PPRK+TEMRTYAAL+PN
Sbjct: 439 IPCTANKYLYGDPTAGPLP-PPRKMTEMRTYAALVPN 474

[Close]

BLAST of PI0001122 vs. TAIR 10
Match: AT1G49750.1 (Leucine-rich repeat (LRR) family protein )

HSP 1 Score: 139.4 bits (350), Expect = 2.3e-33
Identity = 65/134 (48.51%), Postives = 86/134 (64.18%), Query Frame = 0


Query: 2   EIGLLENTILFNASKNYLTGPIPYSFCCLTKMQILIFSDNNLYGAVPEDVCKLPNLQSFN 61
           +IG L    +F+   N LTGPIPYSF CL  M+ L  + N  YG +PE VC++  LQ+ +
Sbjct: 335 QIGNLTRATVFDVGFNQLTGPIPYSFGCLETMEQLNLAGNKFYGTIPEIVCEIACLQNVS 394

Query: 62  LRNNFFTQVGPVCRSLIWKKVLDVSGNCILGLPKQKSEKECTYFFSKAHSCPDEKSMKII 121
           L NN+FTQVGP CR LI +K++DVS NCIL LP QK+  EC  FF +  +CP+ KS+  +
Sbjct: 395 LSNNYFTQVGPKCRKLIKRKIMDVSMNCILDLPNQKTPSECAKFFMRKQTCPNSKSLFTV 454

Query: 122 PCKATDYQPHPAPP 136
           PC   D  P+   P
Sbjct: 455 PC---DKNPNRGKP 465

[Close]

BLAST of PI0001122 vs. TAIR 10
Match: AT3G19320.1 (Leucine-rich repeat (LRR) family protein )

HSP 1 Score: 134.0 bits (336), Expect = 9.7e-32
Identity = 63/131 (48.09%), Postives = 84/131 (64.12%), Query Frame = 0


Query: 2   EIGLLENTILFNASKNYLTGPIPYSFCCLTKMQILIFSDNNLYGAVPEDVCKLPNLQSFN 61
           +IG L    +F+   N LTGPIPYSF CL KM+ L  + NN YG +PE VC+L  L++ +
Sbjct: 337 QIGNLNRATVFDVELNQLTGPIPYSFGCLKKMEQLNLARNNFYGTIPEIVCELSALKNLS 396

Query: 62  LRNNFFTQVGPVCRSLIWKKVLDVSGNCILGLPKQKSEKECTYFFSKAHSCPDEKSMKII 121
           L  N+FTQVGP CR+LI +K+LDV  NCIL L  Q++  EC  FF +  SCP+ KS   +
Sbjct: 397 LSYNYFTQVGPKCRTLIKRKILDVGMNCILDLTNQRTPWECAKFFLRKQSCPNFKSFFYL 456

Query: 122 PCKATDYQPHP 133
           PC    ++  P
Sbjct: 457 PCGKDPHRIKP 467

[Close]

BLAST of PI0001122 vs. TAIR 10
Match: AT4G06744.1 (Leucine-rich repeat (LRR) family protein )

HSP 1 Score: 107.8 bits (268), Expect = 7.5e-24
Identity = 56/116 (48.28%), Postives = 71/116 (61.21%), Query Frame = 0


Query: 2   EIGLLENTILFNASKNYLTGPIPYSFCCLTKMQILIFSDNNLYGAVPEDVCKL--PNLQS 61
           EIG L    + +   N LTGP+P S  CL K++ L F+ N L+GAVPE VC L   NL +
Sbjct: 258 EIGFLTGASVIDIGGNKLTGPLPLSLMCLEKVEQLNFAGNLLFGAVPEAVCMLLRDNLVN 317

Query: 62  FNLRNNFFTQVGPVCRSLIWKKVLDVSGNCILGLPKQKSEKECTYFF--SKAHSCP 114
            +L +N+FT VGP CR L+ K VLDV  NCI   P Q+S +EC  FF   K + CP
Sbjct: 318 LSLSDNYFTHVGPWCRGLLEKGVLDVGNNCIPFFPGQRSMQECAEFFVKPKKYYCP 373

[Close]

BLAST of PI0001122 vs. TAIR 10
Match: AT2G15880.1 (Leucine-rich repeat (LRR) family protein )

HSP 1 Score: 90.5 bits (223), Expect = 1.2e-18
Identity = 54/140 (38.57%), Postives = 72/140 (51.43%), Query Frame = 0


Query: 2   EIGLLENTILFNASKNYLTGPIPYSFCCLTKMQILIFSDNNLYGAVPEDVCKLPNLQSFN 61
           EIG L N  +F+AS N  TG +P SF  LT M+    S N L G +PE++CKLP L +  
Sbjct: 269 EIGKLANVNVFDASMNSFTGVLPPSFVGLTSMEEFDISGNKLTGFIPENICKLPKLVNLT 328

Query: 62  LRNNFFTQVGPVCRSLIWKKV-LDVSGNCILGLPKQKSEKECTYFFSKAHSCPDEK---- 121
              N+F   G  C     K++ LD + NC+   PKQ+S KEC    S+   C  +K    
Sbjct: 329 YAYNYFNGQGDSCVPGSQKQIALDDTRNCLPDRPKQRSAKECAVVISRPVDCSKDKCAGG 388

Query: 122 SMKIIPCKATDYQPHPAPPR 137
           S +  P K+    P P P R
Sbjct: 389 SSQATPSKS----PSPVPTR 404

[Close]

BLAST of PI0001122 vs. TAIR 10
Match: AT3G24480.1 (Leucine-rich repeat (LRR) family protein )

HSP 1 Score: 84.0 bits (206), Expect = 1.2e-16
Identity = 47/140 (33.57%), Postives = 70/140 (50.00%), Query Frame = 0


Query: 2   EIGLLENTILFNASKNYLTGPIPYSFCCLTKMQILIFSDNNLYGAVPEDVCKLPNLQSFN 61
           +IG L+N  +F+ S N L GP+P S   + +++ L  + N L G +P  +C+LP L++F 
Sbjct: 283 DIGRLKNVTVFDVSFNELVGPLPESVGGMVEVEQLNVAHNLLSGKIPASICQLPKLENFT 342

Query: 62  LRNNFFTQVGPVCRSLIWKKVLDVSGNCILGLPKQKSEKECTYFFSK------AHSCPDE 121
              NFFT   PVC  L      D   NC+ G P Q+S ++C+ F S+      +  C   
Sbjct: 343 YSYNFFTGEAPVCLRL---SEFDDRRNCLPGRPAQRSSRQCSAFLSRPSVDCGSFGCGRS 402

Query: 122 KSMKIIPCKATDYQPHPAPP 136
                 P  A    P P+PP
Sbjct: 403 VVKPSPPIVALPPPPPPSPP 419

The following BLAST results are available for this feature:

BLAST of PI0001122 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8W3M4	1.1e-22	48.28	Uncharacterized protein At4g06744 OS=Arabidopsis thaliana OX=3702 GN=At4g06744 P...	[more]
Q9XIL9	1.7e-17	38.57	Pollen-specific leucine-rich repeat extensin-like protein 3 OS=Arabidopsis thali...	[more]
Q9LHF1	1.6e-15	33.57	Leucine-rich repeat extensin-like protein 4 OS=Arabidopsis thaliana OX=3702 GN=L...	[more]
O81765	1.6e-15	34.48	Pollen-specific leucine-rich repeat extensin-like protein 4 OS=Arabidopsis thali...	[more]
O48809	4.7e-15	32.89	Leucine-rich repeat extensin-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=L...	[more]

BLAST of PI0001122 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7SP18	3.1e-78	92.00	Leucine-rich repeat extensin-like protein 3 OS=Cucumis melo var. makuwa OX=11946...	[more]
A0A1S3C0I8	3.1e-78	92.00	uncharacterized protein At4g06744-like OS=Cucumis melo OX=3656 GN=LOC103495255 P...	[more]
A0A0A0K2K4	4.4e-72	87.42	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G073410 PE=4 SV=1	[more]
A0A6J1I5U8	3.8e-60	74.52	uncharacterized protein At4g06744-like OS=Cucurbita maxima OX=3661 GN=LOC1114709...	[more]
A0A6J1GJ99	1.1e-59	73.89	uncharacterized protein At4g06744-like OS=Cucurbita moschata OX=3662 GN=LOC11145...	[more]

BLAST of PI0001122 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0031321.1	6.5e-78	92.00	leucine-rich repeat extensin-like protein 3 [Cucumis melo var. makuwa] >TYK06772...	[more]
XP_008454972.1	6.5e-78	92.00	PREDICTED: uncharacterized protein At4g06744-like [Cucumis melo]	[more]
XP_004137106.2	9.0e-72	87.42	uncharacterized protein At4g06744 [Cucumis sativus] >KGN43905.1 hypothetical pro...	[more]
XP_022972386.1	7.9e-60	74.52	uncharacterized protein At4g06744-like [Cucurbita maxima]	[more]
XP_023553810.1	7.9e-60	74.52	uncharacterized protein At4g06744-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of PI0001122 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G49750.1	2.3e-33	48.51	Leucine-rich repeat (LRR) family protein	[more]
AT3G19320.1	9.7e-32	48.09	Leucine-rich repeat (LRR) family protein	[more]
AT4G06744.1	7.5e-24	48.28	Leucine-rich repeat (LRR) family protein	[more]
AT2G15880.1	1.2e-18	38.57	Leucine-rich repeat (LRR) family protein	[more]
AT3G24480.1	1.2e-16	33.57	Leucine-rich repeat (LRR) family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR032675	Leucine-rich repeat domain superfamily	GENE3D	3.80.10.10	Ribonuclease Inhibitor	coord: 1..127 e-value: 9.9E-18 score: 66.1
IPR001611	Leucine-rich repeat	PFAM	PF00560	LRR_1	coord: 56..72 e-value: 1.2 score: 10.0
None	No IPR available	PANTHER	PTHR32093	LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED	coord: 1..134
None	No IPR available	PANTHER	PTHR32093:SF131	BNAC05G26270D PROTEIN	coord: 1..134
None	No IPR available	SUPERFAMILY	52058	L domain-like	coord: 10..94

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0001122.1	PI0001122.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding