Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTCCCATCTCCAAGTGATCAGTCGTTAAGGCCAAGTGAAGGAAGAAGGGTAAGATGATTTATCTCGCATGGAAGCTACGCGAGCAAATCACAGTCTTTCACTCTAAGTTTTCTTGTAGTATGGGAGTGTTTATACTCCTAAAGACCTTGACACCGAGGGCTATAGCACAGTCCAAAAAGACAAGAGTTGGTTGACAAGGCTAGGTTTTCCTTGTAATAGGAAAGAAAGGAAATTGTTATCTATAAAGTGTTGGATCAAATGAATAAAATGGAATTGTATTGTTTAAAGATTATTTGTTGTGTTGATTTTATTCCGCTGCAATGTTTTATACTTATTGCTTAGAAGATGAAAAGAACTTAAGTGTTGATACTAGGCGATAAAGTCAGATCAAACGTTGTATTTGGTTAAGTGTTTAATTTCCGCTGCATTGTGTTGAAGTCTCTTGAGTTTGAAGTTGGAGCTTGGCGATAGAGACTGATTAAAGAAGTTGTTCCGCTTACTAGGCATCCAGTGTTCATCACTCGGTGTGGTTTACGTTGAATGTCTAGGCAACACGTCTCTTGCATATCGCATGAAGCAATTTTTTAAGCAGGACGTGACACTAAGTTCCATGCGCGATTCACTTTCTTTTCTTCTTTTCGCCATCCTGCGTAGAAAAATACTTAAAAGCATAGTTAATCAAACGTGATGACTTATGTAAGACACATTCTCTTATTATTACAAATTTACACTAGCGTTTTGATCATTTATCTCGCATTTTGACTTCATTGTTTTACCTAAAGGAGCACAATAACTTGTACTTCTGCAAGCTATCAAATGTGCTAATCGGATTGTAAGTTTACTTATGATTTACTTATATACAATATATAATATTTTGTTACATTACCTATGGTGACTTCACTTGTATTGTTGTATAGGATGAATTAGTTGCAATACATCAAGGTGAGGATATCTTGACCGAAGCATTGGGTACTGAGGAACATGGTGGACGTGTAAGAGGAGTGGGTGATTTTGTTTTTCAATCTCAATATTTCAAGTTAGTAAAAGGGATGATAAAAATGACTCCTGAAGTTGAAGTATGTAATAAAGAAAAGGATGTTCGATGTAACAAAGTTTTAAAAAGTAGAAGTTACAACAAGAAAAGTAATCACTCGAGATCGTCCATTGGAAGTTTCAACCTAGATCTTCATGAGGATGAGGATATGAGCAATACACCTAAAAAAGGATTGAAGGTAATTGAATTTGTTGGCACTTTTAACATTTTAAAGTTATTGTTCTTAACGATGCTTTTAATACTTGTGAAGGGAACACCATGCCACTTGTCTATAGGATCAATTGACGATAACATTGAATGTCCAGATGTTAATGTTTTGATAGACATTGTCATGGAAGAAGGTTTGACTATATCAAATCCAGTGAAGGGAAAAATAGAGACTTTAAATCAAGTAATGAGTAACATCATTTGA
mRNA sequence
ATGTTCCCATCTCCAAGTGATCAGTCGTTAAGGCCAAGTGAAGGAAGAAGGGATGAATTAGTTGCAATACATCAAGGTGAGGATATCTTGACCGAAGCATTGGGTACTGAGGAACATGGTGGACGTGTAAGAGGAGTGGGTGATTTTGTTTTTCAATCTCAATATTTCAAGTTAGTAAAAGGGATGATAAAAATGACTCCTGAAGTTGAAGTATGTAATAAAGAAAAGGATGTTCGATGTAACAAAGTTTTAAAAAGTAGAAGTTACAACAAGAAAAGTAATCACTCGAGATCGTCCATTGGAAGTTTCAACCTAGATCTTCATGAGGATGAGGATATGAGCAATACACCTAAAAAAGGATTGAAGGGAACACCATGCCACTTGTCTATAGGATCAATTGACGATAACATTGAATGTCCAGATGTTAATGTTTTGATAGACATTGTCATGGAAGAAGGTTTGACTATATCAAATCCAGTGAAGGGAAAAATAGAGACTTTAAATCAAGTAATGAGTAACATCATTTGA
Coding sequence (CDS)
ATGTTCCCATCTCCAAGTGATCAGTCGTTAAGGCCAAGTGAAGGAAGAAGGGATGAATTAGTTGCAATACATCAAGGTGAGGATATCTTGACCGAAGCATTGGGTACTGAGGAACATGGTGGACGTGTAAGAGGAGTGGGTGATTTTGTTTTTCAATCTCAATATTTCAAGTTAGTAAAAGGGATGATAAAAATGACTCCTGAAGTTGAAGTATGTAATAAAGAAAAGGATGTTCGATGTAACAAAGTTTTAAAAAGTAGAAGTTACAACAAGAAAAGTAATCACTCGAGATCGTCCATTGGAAGTTTCAACCTAGATCTTCATGAGGATGAGGATATGAGCAATACACCTAAAAAAGGATTGAAGGGAACACCATGCCACTTGTCTATAGGATCAATTGACGATAACATTGAATGTCCAGATGTTAATGTTTTGATAGACATTGTCATGGAAGAAGGTTTGACTATATCAAATCCAGTGAAGGGAAAAATAGAGACTTTAAATCAAGTAATGAGTAACATCATTTGA
Protein sequence
MFPSPSDQSLRPSEGRRDELVAIHQGEDILTEALGTEEHGGRVRGVGDFVFQSQYFKLVKGMIKMTPEVEVCNKEKDVRCNKVLKSRSYNKKSNHSRSSIGSFNLDLHEDEDMSNTPKKGLKGTPCHLSIGSIDDNIECPDVNVLIDIVMEEGLTISNPVKGKIETLNQVMSNII
Homology
BLAST of PI0001095 vs. ExPASy TrEMBL
Match:
A0A5D3D7Q9 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1274G00260 PE=4 SV=1)
HSP 1 Score: 186.8 bits (473), Expect = 7.7e-44
Identity = 109/182 (59.89%), Postives = 128/182 (70.33%), Query Frame = 0
Query: 7 DQSLRPSEGRRDELVAIHQGEDILTEALGTEEHGGRVRGVGDFVFQSQYFKLVKGMIKM- 66
D + R R DELVA H+ EDILT+ALG++EHGG VRGVG FV QSQYF VKG KM
Sbjct: 221 DDATRDCASRIDELVATHKNEDILTDALGSKEHGGCVRGVGGFVSQSQYFNTVKGKEKMI 280
Query: 67 TPEVEVCNKEK-DVRCNKVLKSRSYNKKSNHSRSSIGSFNLDLHEDEDMSNTP-KKGLKG 126
TP+VE+C+KE+ D RC +S K+SNHSRSSIGS N+DL DED TP KG++G
Sbjct: 281 TPQVEICHKEEDDSRC------KSDKKRSNHSRSSIGSINIDLDADED---TPSNKGVEG 340
Query: 127 TPCHLSIGSI----------DDNIECPDVNVLIDIVMEEGLTISNPVKGKIETLNQVMSN 176
TPC LSIGSI +DNI C +V VL+D+VM E LTI NPVKGKIETLNQ + N
Sbjct: 341 TPCQLSIGSIKNIVAVATIVEDNIGCSNVKVLVDVVMGENLTIPNPVKGKIETLNQALGN 393
BLAST of PI0001095 vs. ExPASy TrEMBL
Match:
A0A5A7U589 (ULP_PROTEASE domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold175G00330 PE=3 SV=1)
HSP 1 Score: 184.9 bits (468), Expect = 2.9e-43
Identity = 107/179 (59.78%), Postives = 127/179 (70.95%), Query Frame = 0
Query: 7 DQSLRPSEGRRDELVAIHQGEDILTEALGTEEHGGRVRGVGDFVFQSQYFKLVKGMIKM- 66
D + R R DELVA H+ EDILT+ALG++EHGGRVRGVG FV QSQYF VKG KM
Sbjct: 184 DDATRDCASRIDELVATHKNEDILTDALGSKEHGGRVRGVGGFVSQSQYFNTVKGKEKMI 243
Query: 67 TPEVEVCNKEK-DVRCNKVLKSRSYNKKSNHSRSSIGSFNLDLHEDEDMSNTP-KKGLKG 126
TP+VE+C+KE+ D RC +S K+SNHSRSSIGS N+DL DED TP KG++G
Sbjct: 244 TPQVEICHKEEDDSRC------KSDKKRSNHSRSSIGSINIDLDADED---TPSNKGVEG 303
Query: 127 TPCHLSIGSI----------DDNIECPDVNVLIDIVMEEGLTISNPVKGKIETLNQVMS 173
TPC LSIGSI +DNI C +V VL+D+V EE LTI NPVKGKIETLNQ ++
Sbjct: 304 TPCQLSIGSINNIVAVATIVEDNIGCFNVKVLVDVVTEENLTIPNPVKGKIETLNQALA 353
BLAST of PI0001095 vs. ExPASy TrEMBL
Match:
A0A5A7VCJ3 (Transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold17G00150 PE=4 SV=1)
HSP 1 Score: 183.0 bits (463), Expect = 1.1e-42
Identity = 106/182 (58.24%), Postives = 127/182 (69.78%), Query Frame = 0
Query: 7 DQSLRPSEGRRDELVAIHQGEDILTEALGTEEHGGRVRGVGDFVFQSQYFKLVKGMIKM- 66
D++ R R DELVA H+ EDILT+ LG++EHGG VRGVG FV QSQYF VKG KM
Sbjct: 755 DEATRDCASRIDELVATHKNEDILTDTLGSKEHGGHVRGVGGFVSQSQYFNTVKGKEKMI 814
Query: 67 TPEVEVCNKEK-DVRCNKVLKSRSYNKKSNHSRSSIGSFNLDLHEDEDMSNTP-KKGLKG 126
TP+VE+C+KE+ D RC +S K+SNHSRSSIGS N+DL DED TP KG++G
Sbjct: 815 TPQVEICHKEEDDSRC------KSDKKRSNHSRSSIGSINIDLDVDED---TPSNKGVEG 874
Query: 127 TPCHLSIGSIDD----------NIECPDVNVLIDIVMEEGLTISNPVKGKIETLNQVMSN 176
TPC LSIG I++ NI CP+V VL+D+V E LTI NPVKGKIETLNQ + N
Sbjct: 875 TPCQLSIGIINNIVAVATIVVHNIGCPNVKVLVDVVTGENLTIPNPVKGKIETLNQALGN 927
BLAST of PI0001095 vs. ExPASy TrEMBL
Match:
A0A5A7VBZ7 (DUF4216 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold205G00410 PE=4 SV=1)
HSP 1 Score: 182.6 bits (462), Expect = 1.4e-42
Identity = 107/182 (58.79%), Postives = 128/182 (70.33%), Query Frame = 0
Query: 7 DQSLRPSEGRRDELVAIHQGEDILTEALGTEEHGGRVRGVGDFVFQSQYFKLVKGMIKM- 66
D + R DELVA ++ EDILT+ALG++EHGGRVRGVGDFV QSQYF VKG KM
Sbjct: 372 DDATRDCASPIDELVATNKTEDILTDALGSKEHGGRVRGVGDFVSQSQYFNTVKGKEKMI 431
Query: 67 TPEVEVCNKEK-DVRCNKVLKSRSYNKKSNHSRSSIGSFNLDLHEDEDMSNTP-KKGLKG 126
TP+V++C+KE+ D RC +S K+SNHSRSSIGS N+DL DED TP KG++G
Sbjct: 432 TPQVKICHKEEDDSRC------KSDKKRSNHSRSSIGSINIDLDADED---TPTNKGVEG 491
Query: 127 TPCHLSIGSI----------DDNIECPDVNVLIDIVMEEGLTISNPVKGKIETLNQVMSN 176
TPC LSIGSI +DNIECP+V VL+D+V E LTI N VKGK ETLNQ + N
Sbjct: 492 TPCQLSIGSINNIVAVATIVEDNIECPNVKVLVDVVTGENLTIPNLVKGKTETLNQALGN 544
BLAST of PI0001095 vs. ExPASy TrEMBL
Match:
A0A5A7U2C7 (DUF4216 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold133G00670 PE=4 SV=1)
HSP 1 Score: 181.8 bits (460), Expect = 2.5e-42
Identity = 99/177 (55.93%), Postives = 126/177 (71.19%), Query Frame = 0
Query: 7 DQSLRPSEGRRDELVAIHQGEDILTEALGTEEHGGRVRGVGDFVFQSQYFKLVKGMIKM- 66
D ++R R DELVA ++ EDILT+ LG++EHGGRVRGVG FV QSQYF VKG KM
Sbjct: 194 DDAIRDCASRIDELVATYKNEDILTDTLGSKEHGGRVRGVGGFVSQSQYFNTVKGKKKMK 253
Query: 67 TPEVEVCNKEKDVRCNKVLKSRSYNKKSNHSRSSIGSFNLDLHEDEDMSNTP-KKGLKGT 126
TP+VE+C+KE+D L+ +S K+SNHSRSSIGS ++DL DED+ NTP KG++GT
Sbjct: 254 TPQVEICHKEED-----DLRCKSDKKRSNHSRSSIGSIHIDLDADEDLVNTPSNKGVEGT 313
Query: 127 PCHLSIGS----------IDDNIECPDVNVLIDIVMEEGLTISNPVKGKIETLNQVM 172
PC LS+GS ++DNI CP+V VL+D++ E LTI N VK KIETLNQ +
Sbjct: 314 PCQLSVGSVNNIVAVATIVEDNIGCPNVKVLVDVITGENLTIPNLVKEKIETLNQAL 365
BLAST of PI0001095 vs. NCBI nr
Match:
TYK19584.1 (uncharacterized protein E5676_scaffold1274G00260 [Cucumis melo var. makuwa])
HSP 1 Score: 186.8 bits (473), Expect = 1.6e-43
Identity = 109/182 (59.89%), Postives = 128/182 (70.33%), Query Frame = 0
Query: 7 DQSLRPSEGRRDELVAIHQGEDILTEALGTEEHGGRVRGVGDFVFQSQYFKLVKGMIKM- 66
D + R R DELVA H+ EDILT+ALG++EHGG VRGVG FV QSQYF VKG KM
Sbjct: 221 DDATRDCASRIDELVATHKNEDILTDALGSKEHGGCVRGVGGFVSQSQYFNTVKGKEKMI 280
Query: 67 TPEVEVCNKEK-DVRCNKVLKSRSYNKKSNHSRSSIGSFNLDLHEDEDMSNTP-KKGLKG 126
TP+VE+C+KE+ D RC +S K+SNHSRSSIGS N+DL DED TP KG++G
Sbjct: 281 TPQVEICHKEEDDSRC------KSDKKRSNHSRSSIGSINIDLDADED---TPSNKGVEG 340
Query: 127 TPCHLSIGSI----------DDNIECPDVNVLIDIVMEEGLTISNPVKGKIETLNQVMSN 176
TPC LSIGSI +DNI C +V VL+D+VM E LTI NPVKGKIETLNQ + N
Sbjct: 341 TPCQLSIGSIKNIVAVATIVEDNIGCSNVKVLVDVVMGENLTIPNPVKGKIETLNQALGN 393
BLAST of PI0001095 vs. NCBI nr
Match:
KAA0050438.1 (uncharacterized protein E6C27_scaffold175G00330 [Cucumis melo var. makuwa])
HSP 1 Score: 184.9 bits (468), Expect = 6.0e-43
Identity = 107/179 (59.78%), Postives = 127/179 (70.95%), Query Frame = 0
Query: 7 DQSLRPSEGRRDELVAIHQGEDILTEALGTEEHGGRVRGVGDFVFQSQYFKLVKGMIKM- 66
D + R R DELVA H+ EDILT+ALG++EHGGRVRGVG FV QSQYF VKG KM
Sbjct: 184 DDATRDCASRIDELVATHKNEDILTDALGSKEHGGRVRGVGGFVSQSQYFNTVKGKEKMI 243
Query: 67 TPEVEVCNKEK-DVRCNKVLKSRSYNKKSNHSRSSIGSFNLDLHEDEDMSNTP-KKGLKG 126
TP+VE+C+KE+ D RC +S K+SNHSRSSIGS N+DL DED TP KG++G
Sbjct: 244 TPQVEICHKEEDDSRC------KSDKKRSNHSRSSIGSINIDLDADED---TPSNKGVEG 303
Query: 127 TPCHLSIGSI----------DDNIECPDVNVLIDIVMEEGLTISNPVKGKIETLNQVMS 173
TPC LSIGSI +DNI C +V VL+D+V EE LTI NPVKGKIETLNQ ++
Sbjct: 304 TPCQLSIGSINNIVAVATIVEDNIGCFNVKVLVDVVTEENLTIPNPVKGKIETLNQALA 353
BLAST of PI0001095 vs. NCBI nr
Match:
KAA0065358.1 (transposase [Cucumis melo var. makuwa])
HSP 1 Score: 183.0 bits (463), Expect = 2.3e-42
Identity = 106/182 (58.24%), Postives = 127/182 (69.78%), Query Frame = 0
Query: 7 DQSLRPSEGRRDELVAIHQGEDILTEALGTEEHGGRVRGVGDFVFQSQYFKLVKGMIKM- 66
D++ R R DELVA H+ EDILT+ LG++EHGG VRGVG FV QSQYF VKG KM
Sbjct: 755 DEATRDCASRIDELVATHKNEDILTDTLGSKEHGGHVRGVGGFVSQSQYFNTVKGKEKMI 814
Query: 67 TPEVEVCNKEK-DVRCNKVLKSRSYNKKSNHSRSSIGSFNLDLHEDEDMSNTP-KKGLKG 126
TP+VE+C+KE+ D RC +S K+SNHSRSSIGS N+DL DED TP KG++G
Sbjct: 815 TPQVEICHKEEDDSRC------KSDKKRSNHSRSSIGSINIDLDVDED---TPSNKGVEG 874
Query: 127 TPCHLSIGSIDD----------NIECPDVNVLIDIVMEEGLTISNPVKGKIETLNQVMSN 176
TPC LSIG I++ NI CP+V VL+D+V E LTI NPVKGKIETLNQ + N
Sbjct: 875 TPCQLSIGIINNIVAVATIVVHNIGCPNVKVLVDVVTGENLTIPNPVKGKIETLNQALGN 927
BLAST of PI0001095 vs. NCBI nr
Match:
KAA0063231.1 (uncharacterized protein E6C27_scaffold205G00410 [Cucumis melo var. makuwa])
HSP 1 Score: 182.6 bits (462), Expect = 3.0e-42
Identity = 107/182 (58.79%), Postives = 128/182 (70.33%), Query Frame = 0
Query: 7 DQSLRPSEGRRDELVAIHQGEDILTEALGTEEHGGRVRGVGDFVFQSQYFKLVKGMIKM- 66
D + R DELVA ++ EDILT+ALG++EHGGRVRGVGDFV QSQYF VKG KM
Sbjct: 372 DDATRDCASPIDELVATNKTEDILTDALGSKEHGGRVRGVGDFVSQSQYFNTVKGKEKMI 431
Query: 67 TPEVEVCNKEK-DVRCNKVLKSRSYNKKSNHSRSSIGSFNLDLHEDEDMSNTP-KKGLKG 126
TP+V++C+KE+ D RC +S K+SNHSRSSIGS N+DL DED TP KG++G
Sbjct: 432 TPQVKICHKEEDDSRC------KSDKKRSNHSRSSIGSINIDLDADED---TPTNKGVEG 491
Query: 127 TPCHLSIGSI----------DDNIECPDVNVLIDIVMEEGLTISNPVKGKIETLNQVMSN 176
TPC LSIGSI +DNIECP+V VL+D+V E LTI N VKGK ETLNQ + N
Sbjct: 492 TPCQLSIGSINNIVAVATIVEDNIECPNVKVLVDVVTGENLTIPNLVKGKTETLNQALGN 544
BLAST of PI0001095 vs. NCBI nr
Match:
KAA0047815.1 (hypothetical protein E6C27_scaffold133G00670 [Cucumis melo var. makuwa])
HSP 1 Score: 181.8 bits (460), Expect = 5.1e-42
Identity = 99/177 (55.93%), Postives = 126/177 (71.19%), Query Frame = 0
Query: 7 DQSLRPSEGRRDELVAIHQGEDILTEALGTEEHGGRVRGVGDFVFQSQYFKLVKGMIKM- 66
D ++R R DELVA ++ EDILT+ LG++EHGGRVRGVG FV QSQYF VKG KM
Sbjct: 194 DDAIRDCASRIDELVATYKNEDILTDTLGSKEHGGRVRGVGGFVSQSQYFNTVKGKKKMK 253
Query: 67 TPEVEVCNKEKDVRCNKVLKSRSYNKKSNHSRSSIGSFNLDLHEDEDMSNTP-KKGLKGT 126
TP+VE+C+KE+D L+ +S K+SNHSRSSIGS ++DL DED+ NTP KG++GT
Sbjct: 254 TPQVEICHKEED-----DLRCKSDKKRSNHSRSSIGSIHIDLDADEDLVNTPSNKGVEGT 313
Query: 127 PCHLSIGS----------IDDNIECPDVNVLIDIVMEEGLTISNPVKGKIETLNQVM 172
PC LS+GS ++DNI CP+V VL+D++ E LTI N VK KIETLNQ +
Sbjct: 314 PCQLSVGSVNNIVAVATIVEDNIGCPNVKVLVDVITGENLTIPNLVKEKIETLNQAL 365
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| A0A5D3D7Q9 | 7.7e-44 | 59.89 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
| A0A5A7U589 | 2.9e-43 | 59.78 | ULP_PROTEASE domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN... | [more] |
| A0A5A7VCJ3 | 1.1e-42 | 58.24 | Transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold17G00150 PE=... | [more] |
| A0A5A7VBZ7 | 1.4e-42 | 58.79 | DUF4216 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2... | [more] |
| A0A5A7U2C7 | 2.5e-42 | 55.93 | DUF4216 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| TYK19584.1 | 1.6e-43 | 59.89 | uncharacterized protein E5676_scaffold1274G00260 [Cucumis melo var. makuwa] | [more] |
| KAA0050438.1 | 6.0e-43 | 59.78 | uncharacterized protein E6C27_scaffold175G00330 [Cucumis melo var. makuwa] | [more] |
| KAA0065358.1 | 2.3e-42 | 58.24 | transposase [Cucumis melo var. makuwa] | [more] |
| KAA0063231.1 | 3.0e-42 | 58.79 | uncharacterized protein E6C27_scaffold205G00410 [Cucumis melo var. makuwa] | [more] |
| KAA0047815.1 | 5.1e-42 | 55.93 | hypothetical protein E6C27_scaffold133G00670 [Cucumis melo var. makuwa] | [more] |
| Match Name | E-value | Identity | Description | |
|---|
