Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAATGACTGCGAAACAGTGGCTCTGACGCAGGTAACGAACGACGTCTTCAAGAATGGGGTACCCGAGAAGATGACAGACCCTGGTAGCTTCACGATGCCATGCTCAATAGGCGGCATGGATCTAGGTCGCGCACTATGTGATCTGGGAGCCAGTATCAACCTGATGCCCCTCTCCATCTTCAAGAAATTGGAGCTAGGGGAGGCGTAGCCAACACTCATGAGGCTCCAATTCGCTGACAGATCCATCGCCAAGCCTGAGGGGAAAATTGAAGACGTTTTGGTTATGGTGGATAAATTCTTGTTCCCCGCCGACTTTGTCATTCTGGATTACGAAGCGGATCGGGAGGTGCCAATTATCTTGGGGCGACCATTCTTGTCTACTGGTCGCGTCCTAATAGATGTCCACCAAGGGGAATTAACTCTGCGTTTGAATGATGAAGAGGTCAAGTTCAACGTCGCAAATGCAGTGAATTCCCCTTTGACGAAAGCTGCAGCACAATAG
mRNA sequence
ATGAATGACTGCGAAACAGTGGCTCTGACGCAGGTAACGAACGACGTCTTCAAGAATGGGGTACCCGAGAAGATGACAGACCCTGGTAGCTTCACGATGCCATGCTCAATAGGCGGCATGGATCTAGGTCGCGCACTATGTGATCTGGGAGCCAGTATCAACCTGATGCCCCTCTCCATCTTCAAGAAATTGGAGCTAGGGGAGGCATCCATCGCCAAGCCTGAGGGGAAAATTGAAGACGTTTTGGTTATGGTGGATAAATTCTTGTTCCCCGCCGACTTTGTCATTCTGGATTACGAAGCGGATCGGGAGGTGCCAATTATCTTGGGGCGACCATTCTTGTCTACTGGTCGCGTCCTAATAGATGTCCACCAAGGGGAATTAACTCTGCGTTTGAATGATGAAGAGGTCAAGTTCAACGTCGCAAATGCAGTGAATTCCCCTTTGACGAAAGCTGCAGCACAATAG
Coding sequence (CDS)
ATGAATGACTGCGAAACAGTGGCTCTGACGCAGGTAACGAACGACGTCTTCAAGAATGGGGTACCCGAGAAGATGACAGACCCTGGTAGCTTCACGATGCCATGCTCAATAGGCGGCATGGATCTAGGTCGCGCACTATGTGATCTGGGAGCCAGTATCAACCTGATGCCCCTCTCCATCTTCAAGAAATTGGAGCTAGGGGAGGCATCCATCGCCAAGCCTGAGGGGAAAATTGAAGACGTTTTGGTTATGGTGGATAAATTCTTGTTCCCCGCCGACTTTGTCATTCTGGATTACGAAGCGGATCGGGAGGTGCCAATTATCTTGGGGCGACCATTCTTGTCTACTGGTCGCGTCCTAATAGATGTCCACCAAGGGGAATTAACTCTGCGTTTGAATGATGAAGAGGTCAAGTTCAACGTCGCAAATGCAGTGAATTCCCCTTTGACGAAAGCTGCAGCACAATAG
Protein sequence
MNDCETVALTQVTNDVFKNGVPEKMTDPGSFTMPCSIGGMDLGRALCDLGASINLMPLSIFKKLELGEASIAKPEGKIEDVLVMVDKFLFPADFVILDYEADREVPIILGRPFLSTGRVLIDVHQGELTLRLNDEEVKFNVANAVNSPLTKAAAQ
Homology
BLAST of PI0000993 vs. ExPASy TrEMBL
Match:
A0A5A7VJ95 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold2484G00710 PE=4 SV=1)
HSP 1 Score: 217.6 bits (553), Expect = 3.6e-53
Identity = 113/159 (71.07%), Postives = 124/159 (77.99%), Query Frame = 0
Query: 2 NDCETVALTQVTNDVFKNGVPEKMTDPGSFTMPCSIGGMDLGRALCDLGASINLMPLSIF 61
NDCETVALT T+D+ KNG P+KMTD SFT+PCSI MDLG LCDLGASINLMPLSIF
Sbjct: 97 NDCETVALTLETSDILKNGAPKKMTDCRSFTVPCSINNMDLGHVLCDLGASINLMPLSIF 156
Query: 62 KKLELGEA------------SIAKPEGKIEDVLVMVDKFLFPADFVILDYEADREVPIIL 121
KKLE+ E SIAK EGKIED+LV VDKFLF ADF+ILDYEA++EVPII
Sbjct: 157 KKLEIEEVQPMHMRLQFVDRSIAKHEGKIEDILVKVDKFLFHADFIILDYEANQEVPIIF 216
Query: 122 GRPFLSTGRVLIDVHQGELTLRLNDEEVKFNVANAVNSP 149
GRPFLSTG LIDVHQGELT+R ND EVKFNV NA+ P
Sbjct: 217 GRPFLSTGHALIDVHQGELTMRFND-EVKFNVMNAMKFP 254
BLAST of PI0000993 vs. ExPASy TrEMBL
Match:
A0A1S3CN55 (uncharacterized protein LOC103502805 OS=Cucumis melo OX=3656 GN=LOC103502805 PE=4 SV=1)
HSP 1 Score: 217.6 bits (553), Expect = 3.6e-53
Identity = 113/159 (71.07%), Postives = 124/159 (77.99%), Query Frame = 0
Query: 2 NDCETVALTQVTNDVFKNGVPEKMTDPGSFTMPCSIGGMDLGRALCDLGASINLMPLSIF 61
NDCETVALT T+D+ KNG P+KMTD SFT+PCSI MDLG LCDLGASINLMPLSIF
Sbjct: 8 NDCETVALTLETSDILKNGAPKKMTDCRSFTVPCSINNMDLGHVLCDLGASINLMPLSIF 67
Query: 62 KKLELGEA------------SIAKPEGKIEDVLVMVDKFLFPADFVILDYEADREVPIIL 121
KKLE+ E SIAK EGKIED+LV VDKFLF ADF+ILDYEA++EVPII
Sbjct: 68 KKLEIEEVQPMHMRLQFVDRSIAKHEGKIEDILVKVDKFLFHADFIILDYEANQEVPIIF 127
Query: 122 GRPFLSTGRVLIDVHQGELTLRLNDEEVKFNVANAVNSP 149
GRPFLSTG LIDVHQGELT+R ND EVKFNV NA+ P
Sbjct: 128 GRPFLSTGHALIDVHQGELTMRFND-EVKFNVMNAMKFP 165
BLAST of PI0000993 vs. ExPASy TrEMBL
Match:
A0A5D3DPZ2 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold862G00150 PE=4 SV=1)
HSP 1 Score: 209.9 bits (533), Expect = 7.5e-51
Identity = 109/148 (73.65%), Postives = 118/148 (79.73%), Query Frame = 0
Query: 1 MNDCETVALTQVTNDVFKNGVPEKMTDPGSFTMPCSIGGMDLGRALCDLGASINLMPLSI 60
+ND ETVALTQ TND FKNGVPEKMTDP SFT+ S GGMDLG ALCDLGASINLMPLSI
Sbjct: 18 INDFETVALTQATNDDFKNGVPEKMTDPRSFTVSYSKGGMDLGCALCDLGASINLMPLSI 77
Query: 61 FKKLELGEASIAKPEGKIEDVLVMVDKFLFPADFVILDYEADREVPIILGRPFLSTGRVL 120
FKK+ +G EGKIEDVLV VDKFLF DFVILDY+ADR+VPIILGRPFLST L
Sbjct: 78 FKKVGIG-------EGKIEDVLVKVDKFLFSEDFVILDYKADRKVPIILGRPFLSTSCTL 137
Query: 121 IDVHQGELTLRLNDEEVKFNVANAVNSP 149
I VHQGELT+ NDEE+KFNV + P
Sbjct: 138 IGVHQGELTMHFNDEEIKFNVVKPMKFP 158
BLAST of PI0000993 vs. ExPASy TrEMBL
Match:
A0A6J1DY39 (uncharacterized protein LOC111025653 OS=Momordica charantia OX=3673 GN=LOC111025653 PE=4 SV=1)
HSP 1 Score: 204.9 bits (520), Expect = 2.4e-49
Identity = 100/157 (63.69%), Postives = 127/157 (80.89%), Query Frame = 0
Query: 1 MNDCETVALTQVTNDVFKNGVPEKMTDPGSFTMPCSIGGMDLGRALCDLGASINLMPLSI 60
+ + ETVALT+ +++VFK+ +P K+ DPGSFT+PC IGG D+GRALCDLGASINLMPLSI
Sbjct: 588 LGEYETVALTECSSNVFKSKMPPKLKDPGSFTIPCLIGGKDVGRALCDLGASINLMPLSI 647
Query: 61 FKKLELGEA------------SIAKPEGKIEDVLVMVDKFLFPADFVILDYEADREVPII 120
FKK E+G+A SI KPEGKIEDVLV VDKF+FP DF+ILD EAD++VPII
Sbjct: 648 FKKFEIGKASPTTVTLQLADRSITKPEGKIEDVLVKVDKFIFPTDFIILDCEADKDVPII 707
Query: 121 LGRPFLSTGRVLIDVHQGELTLRLNDEEVKFNVANAV 146
LGRPFL+TG LIDV +GELT+R++D++V FN+ +A+
Sbjct: 708 LGRPFLATGETLIDVKKGELTMRVDDQKVTFNMLDAM 744
BLAST of PI0000993 vs. ExPASy TrEMBL
Match:
A0A6J1CPJ3 (uncharacterized protein LOC111012947 OS=Momordica charantia OX=3673 GN=LOC111012947 PE=4 SV=1)
HSP 1 Score: 204.1 bits (518), Expect = 4.1e-49
Identity = 101/160 (63.12%), Postives = 127/160 (79.38%), Query Frame = 0
Query: 1 MNDCETVALTQVTNDVFKNGVPEKMTDPGSFTMPCSIGGMDLGRALCDLGASINLMPLSI 60
+ + ETVALT+ +++VFK+ P K+ DPGSFT+ C IGG D+GRALCDLGA INLMPLSI
Sbjct: 586 LGEYETVALTECSSNVFKSKXPPKLKDPGSFTIXCLIGGKDVGRALCDLGAXINLMPLSI 645
Query: 61 FKKLELGEA------------SIAKPEGKIEDVLVMVDKFLFPADFVILDYEADREVPII 120
FKKLE+G+A SI KPEGKIEDVLV VDKF+FPADF+ILD EAD++VPII
Sbjct: 646 FKKLEIGKAXPTTVTLXLADRSITKPEGKIEDVLVKVDKFIFPADFIILDCEADKDVPII 705
Query: 121 LGRPFLSTGRVLIDVHQGELTLRLNDEEVKFNVANAVNSP 149
LGRPFL+TG LIDV +GELT+R++D++V FN+ +A+ P
Sbjct: 706 LGRPFLATGETLIDVKKGELTMRVDDQKVTFNMLDAMKYP 745
BLAST of PI0000993 vs. NCBI nr
Match:
KAA0067858.1 (uncharacterized protein E6C27_scaffold2484G00710 [Cucumis melo var. makuwa])
HSP 1 Score: 217.6 bits (553), Expect = 7.4e-53
Identity = 113/159 (71.07%), Postives = 124/159 (77.99%), Query Frame = 0
Query: 2 NDCETVALTQVTNDVFKNGVPEKMTDPGSFTMPCSIGGMDLGRALCDLGASINLMPLSIF 61
NDCETVALT T+D+ KNG P+KMTD SFT+PCSI MDLG LCDLGASINLMPLSIF
Sbjct: 97 NDCETVALTLETSDILKNGAPKKMTDCRSFTVPCSINNMDLGHVLCDLGASINLMPLSIF 156
Query: 62 KKLELGEA------------SIAKPEGKIEDVLVMVDKFLFPADFVILDYEADREVPIIL 121
KKLE+ E SIAK EGKIED+LV VDKFLF ADF+ILDYEA++EVPII
Sbjct: 157 KKLEIEEVQPMHMRLQFVDRSIAKHEGKIEDILVKVDKFLFHADFIILDYEANQEVPIIF 216
Query: 122 GRPFLSTGRVLIDVHQGELTLRLNDEEVKFNVANAVNSP 149
GRPFLSTG LIDVHQGELT+R ND EVKFNV NA+ P
Sbjct: 217 GRPFLSTGHALIDVHQGELTMRFND-EVKFNVMNAMKFP 254
BLAST of PI0000993 vs. NCBI nr
Match:
XP_008465121.1 (PREDICTED: uncharacterized protein LOC103502805 [Cucumis melo])
HSP 1 Score: 217.6 bits (553), Expect = 7.4e-53
Identity = 113/159 (71.07%), Postives = 124/159 (77.99%), Query Frame = 0
Query: 2 NDCETVALTQVTNDVFKNGVPEKMTDPGSFTMPCSIGGMDLGRALCDLGASINLMPLSIF 61
NDCETVALT T+D+ KNG P+KMTD SFT+PCSI MDLG LCDLGASINLMPLSIF
Sbjct: 8 NDCETVALTLETSDILKNGAPKKMTDCRSFTVPCSINNMDLGHVLCDLGASINLMPLSIF 67
Query: 62 KKLELGEA------------SIAKPEGKIEDVLVMVDKFLFPADFVILDYEADREVPIIL 121
KKLE+ E SIAK EGKIED+LV VDKFLF ADF+ILDYEA++EVPII
Sbjct: 68 KKLEIEEVQPMHMRLQFVDRSIAKHEGKIEDILVKVDKFLFHADFIILDYEANQEVPIIF 127
Query: 122 GRPFLSTGRVLIDVHQGELTLRLNDEEVKFNVANAVNSP 149
GRPFLSTG LIDVHQGELT+R ND EVKFNV NA+ P
Sbjct: 128 GRPFLSTGHALIDVHQGELTMRFND-EVKFNVMNAMKFP 165
BLAST of PI0000993 vs. NCBI nr
Match:
XP_030477929.1 (uncharacterized protein LOC115694963 [Cannabis sativa])
HSP 1 Score: 214.5 bits (545), Expect = 6.3e-52
Identity = 106/160 (66.25%), Postives = 128/160 (80.00%), Query Frame = 0
Query: 1 MNDCETVALTQVTNDVFKNGVPEKMTDPGSFTMPCSIGGMDLGRALCDLGASINLMPLSI 60
+ + ETVALT+ + + K+ +P K+ DPGSFT+PCSIGG D+GRALCDLGASINLMP+SI
Sbjct: 46 LGEFETVALTEGCSAMLKSKIPPKLKDPGSFTIPCSIGGRDVGRALCDLGASINLMPMSI 105
Query: 61 FKKLELGEA------------SIAKPEGKIEDVLVMVDKFLFPADFVILDYEADREVPII 120
FKKL +GEA S+A PEGKIEDVLV VDKF+FPADF+ILDYEADR+VPII
Sbjct: 106 FKKLGIGEARPTTVTLQLADRSMAHPEGKIEDVLVQVDKFIFPADFIILDYEADRDVPII 165
Query: 121 LGRPFLSTGRVLIDVHQGELTLRLNDEEVKFNVANAVNSP 149
LGRPFL+TGR LIDV GELT+R+ND++V FNV NA+ P
Sbjct: 166 LGRPFLATGRTLIDVQNGELTMRVNDQKVTFNVFNAMRFP 205
BLAST of PI0000993 vs. NCBI nr
Match:
XP_030478287.1 (uncharacterized protein LOC115695357 [Cannabis sativa])
HSP 1 Score: 214.5 bits (545), Expect = 6.3e-52
Identity = 106/160 (66.25%), Postives = 128/160 (80.00%), Query Frame = 0
Query: 1 MNDCETVALTQVTNDVFKNGVPEKMTDPGSFTMPCSIGGMDLGRALCDLGASINLMPLSI 60
+ + ETVALT+ + + K+ +P K+ DPGSFT+PCSIGG D+GRALCDLGASINLMP+SI
Sbjct: 67 LGEFETVALTEGCSAMLKSKIPPKLKDPGSFTIPCSIGGRDVGRALCDLGASINLMPMSI 126
Query: 61 FKKLELGEA------------SIAKPEGKIEDVLVMVDKFLFPADFVILDYEADREVPII 120
FKKL +GEA S+A PEGKIEDVLV VDKF+FPADF+ILDYEADR+VPII
Sbjct: 127 FKKLGIGEARPTTVTLQLADRSMAHPEGKIEDVLVQVDKFIFPADFIILDYEADRDVPII 186
Query: 121 LGRPFLSTGRVLIDVHQGELTLRLNDEEVKFNVANAVNSP 149
LGRPFL+TGR LIDV GELT+R+ND++V FNV NA+ P
Sbjct: 187 LGRPFLATGRTLIDVQNGELTMRVNDQKVTFNVFNAMRFP 226
BLAST of PI0000993 vs. NCBI nr
Match:
KAA0035429.1 (uncharacterized protein E6C27_scaffold285G00480 [Cucumis melo var. makuwa] >TYK25723.1 uncharacterized protein E5676_scaffold862G00150 [Cucumis melo var. makuwa])
HSP 1 Score: 209.9 bits (533), Expect = 1.5e-50
Identity = 109/148 (73.65%), Postives = 118/148 (79.73%), Query Frame = 0
Query: 1 MNDCETVALTQVTNDVFKNGVPEKMTDPGSFTMPCSIGGMDLGRALCDLGASINLMPLSI 60
+ND ETVALTQ TND FKNGVPEKMTDP SFT+ S GGMDLG ALCDLGASINLMPLSI
Sbjct: 18 INDFETVALTQATNDDFKNGVPEKMTDPRSFTVSYSKGGMDLGCALCDLGASINLMPLSI 77
Query: 61 FKKLELGEASIAKPEGKIEDVLVMVDKFLFPADFVILDYEADREVPIILGRPFLSTGRVL 120
FKK+ +G EGKIEDVLV VDKFLF DFVILDY+ADR+VPIILGRPFLST L
Sbjct: 78 FKKVGIG-------EGKIEDVLVKVDKFLFSEDFVILDYKADRKVPIILGRPFLSTSCTL 137
Query: 121 IDVHQGELTLRLNDEEVKFNVANAVNSP 149
I VHQGELT+ NDEE+KFNV + P
Sbjct: 138 IGVHQGELTMHFNDEEIKFNVVKPMKFP 158
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A5A7VJ95 | 3.6e-53 | 71.07 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... | [more] |
A0A1S3CN55 | 3.6e-53 | 71.07 | uncharacterized protein LOC103502805 OS=Cucumis melo OX=3656 GN=LOC103502805 PE=... | [more] |
A0A5D3DPZ2 | 7.5e-51 | 73.65 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
A0A6J1DY39 | 2.4e-49 | 63.69 | uncharacterized protein LOC111025653 OS=Momordica charantia OX=3673 GN=LOC111025... | [more] |
A0A6J1CPJ3 | 4.1e-49 | 63.13 | uncharacterized protein LOC111012947 OS=Momordica charantia OX=3673 GN=LOC111012... | [more] |
Match Name | E-value | Identity | Description | |
KAA0067858.1 | 7.4e-53 | 71.07 | uncharacterized protein E6C27_scaffold2484G00710 [Cucumis melo var. makuwa] | [more] |
XP_008465121.1 | 7.4e-53 | 71.07 | PREDICTED: uncharacterized protein LOC103502805 [Cucumis melo] | [more] |
XP_030477929.1 | 6.3e-52 | 66.25 | uncharacterized protein LOC115694963 [Cannabis sativa] | [more] |
XP_030478287.1 | 6.3e-52 | 66.25 | uncharacterized protein LOC115695357 [Cannabis sativa] | [more] |
KAA0035429.1 | 1.5e-50 | 73.65 | uncharacterized protein E6C27_scaffold285G00480 [Cucumis melo var. makuwa] >TYK2... | [more] |
Match Name | E-value | Identity | Description | |