PI0000825 (gene) Melon (PI 482460) v1

Overview


Name	PI0000825
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	Ty3-gypsy retrotransposon protein
Location	chr10: 3192836 .. 3195843 (+)
RNA-Seq Expression	PI0000825
Synteny	PI0000825

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCCTCCCCCAAATATAATGTCGGTTATGGTGACTGATGTCGATACGAGTGAAGATAGAATGGCGGAGCTTGAAAAGAAGGTTAACATGCTCCTGAAAGCGGTTGAAGAAAGGGATTATGAGATTGCATCCCTGAGAAATCATATTGAAAGTCGTGACGCTGCTGAATCAAGTCACACATATACCACCAAGAATAAGGACAAAGGGAAGGCAATTTTGCAGGAAAGTCAACCACAAAATTCGACCTCAATTGCATCGTTGTCTGTTCAACAGTTGCAGGATATGATAGCCAACTCCATCCGGACTCAATATGGTGGAACTGCTCAAACTTTCTCTTCGTATTCCAAGCCATATACGAAGAGGATCGACAATCTGAAAATGTCGATTGGTTACCAGCCACCTAAGTTCCAGCAATTTGATGGAAAAGGCAATCCAAAGCAACACGTCGCTCACTTTATCGAAACATGTGAAACTGCTGGTGCGCGAGGAGATTTGTTGGTTAGACAGTTCGTCCGAACTCTCAAGGGAAATGCTTTCGACTGGTACACCGACCTTGAGCCTGAAACCATTGATAGTTGGGAGCAGCTTGAGAGGGAATTTCTCAACCGCTTCTACAGCACTCAACGTATCGTTAGCATGATAGAGCTAACGGCCACCAAGCAGCGAAAGGGCGAGCCAGTCATTGACTACATTAATCGCTGAAGAGCGTTAAACCTTAACTGCAAAGACAGATTAACTGAACTGTCAGCAGTAAAAATGTGCACTCAAGGAATGCATTGGGGGCTTCTGTACATCTTGTAGGGAATAAAACCTCGCACCTTCGAAAAGTTAGCAACTAGAGCTCATGATATGGAGTTAAGTATTGCTAATAGAGGAAACAATGACCTGCTGATCCCAGAAGTGAGAAAGAAAAAGAAGGAAATCAAGAGCACCCTAAAGGTATCAAAGGGTGCTACCAAAGAAGCTATGGTCGTTACTACGACCCCTTTAAAGTTCGTTCCTAAAGAGAAGAAGATGGAAAAACGCCAAGATGAAGGCGAAAAAAGACACCCAACATTGAAAGAGAGGCAAGAAAAAGTTTACCCTTTTCCAGACTCTGACTTACCAGATATGTTAGAGCAATTACTGGAAAAACAACTCATTCAACTTCCTGAATGTAAACGACCAGCAGAAATTGGGTAGGTAAATGATCCTAATTACTGCAAATATCATCGAGTTATCAGCCACCCTGTAGAGAAATGCTTCGTGTTAAAAGAGTTAATTTTGAAATTAGCTCTAGACAAAAAAATTGAACTTGATGTCGATGATGTGGCACAAACGAATCATATTGCAGTAATGAGTCATGTAGAGGGTCGGTCACTTGCTACAGGTAGTCTAATCCAATTTGGATCTTTGGAGCCTGTTGTTGTATATTCTTCACCGGAGATCTTACAGAAAAATGACATCCGAACTGTTCACCCAAAAGAAGAAGAAAAGCACGTGGAGAATGCTGACGAGGGATGGACGCTAGTCACGCGTCGAAAAAAGCACAAACAAAATTACTCTAAAAAAGAGTCCCACTTGTACCGAGAGTATAAAAGAAAGGGTAAGTCTCAAAGAAGAAAAACAAGGAAGAATGCAAGGAAGTTTCAACCAATCACCAAAGAAGGTGAGGAGCTTCCTCGATCACGACAACCAATAACTTTGAAAGAATTTTTCGCTGAAAACTTTCCATTCGATATCGTTTCGTGCCATGCTGTTAGTACAACCGAGGATGACACTTCTCCCTCAAATTCTGCAGAAGTCAGTACAATTGGGGATGACACTTCTCCCTCAAAGTCCGCAGAAGCAACAACCAAGCTAGAGGAATTGCCTTCTATGGACATAAATGATTTGTTGTCACTCCCACGAGAAATCAAAGATACAATTATCGAGATACTAAAAAAGGATGATGTCTCGACTATTCCTGCATCACAGACAAAGGCATGTGATTCATGTTGTACATCGATATCATTCAACGATGAAGATTTGCTACTTGGGTCAAGACTTCATAACAGACCTTTATTTGTGTCTGGATATGTTCGGGAGCAAAAGCTCAATCAAATTCTCATCGATAGTGGCTCTACCGTCAACATTCTACCAAAATCAACCATGAATCGATTAGGTATCTCAATCGAGGAGTTATCAAGCAGTAAATTGGTGATTCAAGGCTTTAATCAAGGAGCACAGCGGGCGATAGGCACTGTTCGTTTGGAGATCACCATAGGCGATTTGCAGGCAAGCACTATATTTCATGTGATCGATTCAAGAACCACTTACAAGTTGTTGTTAGGACGACCATGGATTCATGAAAACAGAGTAGTAACTTCCACACTCCATCAATGCTTTAAATTTTATAAACAAGGAATAAAGAAGGTTGATGCTGACACTAAGCCATTTTAGAGGCTGAGTCTCACTTTGCGGATGCAAAATTTTACACAAAGGGAGATGATATAAGTGAGGTCATATCGACTGAAGTTCCCGTAACCAAAGGCACTTATAAGCCCGAGCAAGGAACGATCACAACAAAAAAGTCAAAGGAAGTGGATGTACTCAAAGGTCGAGAGAATGATAAACTAGCGACCCAAACTAAGTCTGAAGTGCCGGCAAACGAAAGTATAGCGGTTCCTCAAGAAAAAGCCTCAAAACCTCCTGTTTTACATTACATTCCACTATCTCGACGCAAGAAGGGAGAATCGCCATTTGCAGAAAATTCGCAAAATTTGGCGGTTGGAGGTGTCGAAATATTAAAGGAAAGTTTCACCATGCCACTTACCAAGATGGATAAAGGAGGGGCGAAAAGGATTGAGAAAGAGAGCATAGAAGCATGCCTTCTAGAAAAACGAACGACGGAAGGATTCGATCAAAAAGCATATAAGTTGATGGCAAAGGCGGGTTATGACTTTACAACCCGTACTGAGTTCAAAAGCAAGATATTTGATGAAAGGCATGGACTTTCTCCTACGCAAAGGAAGCTTCAAAAGCAATGA

mRNA sequence

ATGCCTCCCCCAAATATAATGTCGGTTATGGTGACTGATGTCGATACGAGTGAAGATAGAATGGCGGAGCTTGAAAAGAAGGTTAACATGCTCCTGAAAGCGGTTGAAGAAAGGGATTATGAGATTGCATCCCTGAGAAATCATATTGAAAGTCGTGACGCTGCTGAATCAAGTCACACATATACCACCAAGAATAAGGACAAAGGGAAGGCAATTTTGCAGGAAAGTAGTCTAATCCAATTTGGATCTTTGGAGCCTGTTGTTGTATATTCTTCACCGGAGATCTTACAGAAAAATGACATCCGAACTGTTCACCCAAAAGAAGAAGAAAAGCACGTGGAGAATGCTGACGAGGGATGGACGCTAGTCACGCGTCGAAAAAAGCACAAACAAAATTACTCTAAAAAAGAGTCCCACTTGTACCGAGAGTATAAAAGAAAGGGTAAGTCTCAAAGAAGAAAAACAAGGAAGAATGCAAGGAAGTTTCAACCAATCACCAAAGAAGGTGAGGAGCTTCCTCGATCACGACAACCAATAACTTTGAAAGAATTTTTCGCTGAAAACTTTCCATTCGATATCGTTTCGTGCCATGCTGTTAGTACAACCGAGGATGACACTTCTCCCTCAAATTCTGCAGAAGTCAGTACAATTGGGGATGACACTTCTCCCTCAAAGTCCGCAGAAGCAACAACCAAGCTAGAGGAATTGCCTTCTATGGACATAAATGATTTGTTGTCACTCCCACGAGAAATCAAAGATACAATTATCGAGATACTAAAAAAGGATGATGTCTCGACTATTCCTGCATCACAGACAAAGGCATTTCCCGTAACCAAAGGCACTTATAAGCCCGAGCAAGGAACGATCACAACAAAAAAGTCAAAGGAAGTGGATGTACTCAAAGGTCGAGAGAATGATAAACTAGCGACCCAAACTAAGTCTGAAGTGCCGGCAAACGAAAGTATAGCGGTTCCTCAAGAAAAAGCCTCAAAACCTCCTGTTTTACATTACATTCCACTATCTCGACGCAAGAAGGGAGAATCGCCATTTGCAGAAAATTCGCAAAATTTGGCGGTTGGAGGTGTCGAAATATTAAAGGAAAGTTTCACCATGCCACTTACCAAGATGGATAAAGGAGGGGCGAAAAGGATTGAGAAAGAGAGCATAGAAGCATGCCTTCTAGAAAAACGAACGACGGAAGGATTCGATCAAAAAGCATATAAGTTGATGGCAAAGGCGGGTTATGACTTTACAACCCGTACTGAGTTCAAAAGCAAGATATTTGATGAAAGGCATGGACTTTCTCCTACGCAAAGGAAGCTTCAAAAGCAATGA

Coding sequence (CDS)

ATGCCTCCCCCAAATATAATGTCGGTTATGGTGACTGATGTCGATACGAGTGAAGATAGAATGGCGGAGCTTGAAAAGAAGGTTAACATGCTCCTGAAAGCGGTTGAAGAAAGGGATTATGAGATTGCATCCCTGAGAAATCATATTGAAAGTCGTGACGCTGCTGAATCAAGTCACACATATACCACCAAGAATAAGGACAAAGGGAAGGCAATTTTGCAGGAAAGTAGTCTAATCCAATTTGGATCTTTGGAGCCTGTTGTTGTATATTCTTCACCGGAGATCTTACAGAAAAATGACATCCGAACTGTTCACCCAAAAGAAGAAGAAAAGCACGTGGAGAATGCTGACGAGGGATGGACGCTAGTCACGCGTCGAAAAAAGCACAAACAAAATTACTCTAAAAAAGAGTCCCACTTGTACCGAGAGTATAAAAGAAAGGGTAAGTCTCAAAGAAGAAAAACAAGGAAGAATGCAAGGAAGTTTCAACCAATCACCAAAGAAGGTGAGGAGCTTCCTCGATCACGACAACCAATAACTTTGAAAGAATTTTTCGCTGAAAACTTTCCATTCGATATCGTTTCGTGCCATGCTGTTAGTACAACCGAGGATGACACTTCTCCCTCAAATTCTGCAGAAGTCAGTACAATTGGGGATGACACTTCTCCCTCAAAGTCCGCAGAAGCAACAACCAAGCTAGAGGAATTGCCTTCTATGGACATAAATGATTTGTTGTCACTCCCACGAGAAATCAAAGATACAATTATCGAGATACTAAAAAAGGATGATGTCTCGACTATTCCTGCATCACAGACAAAGGCATTTCCCGTAACCAAAGGCACTTATAAGCCCGAGCAAGGAACGATCACAACAAAAAAGTCAAAGGAAGTGGATGTACTCAAAGGTCGAGAGAATGATAAACTAGCGACCCAAACTAAGTCTGAAGTGCCGGCAAACGAAAGTATAGCGGTTCCTCAAGAAAAAGCCTCAAAACCTCCTGTTTTACATTACATTCCACTATCTCGACGCAAGAAGGGAGAATCGCCATTTGCAGAAAATTCGCAAAATTTGGCGGTTGGAGGTGTCGAAATATTAAAGGAAAGTTTCACCATGCCACTTACCAAGATGGATAAAGGAGGGGCGAAAAGGATTGAGAAAGAGAGCATAGAAGCATGCCTTCTAGAAAAACGAACGACGGAAGGATTCGATCAAAAAGCATATAAGTTGATGGCAAAGGCGGGTTATGACTTTACAACCCGTACTGAGTTCAAAAGCAAGATATTTGATGAAAGGCATGGACTTTCTCCTACGCAAAGGAAGCTTCAAAAGCAATGA

Protein sequence

MPPPNIMSVMVTDVDTSEDRMAELEKKVNMLLKAVEERDYEIASLRNHIESRDAAESSHTYTTKNKDKGKAILQESSLIQFGSLEPVVVYSSPEILQKNDIRTVHPKEEEKHVENADEGWTLVTRRKKHKQNYSKKESHLYREYKRKGKSQRRKTRKNARKFQPITKEGEELPRSRQPITLKEFFAENFPFDIVSCHAVSTTEDDTSPSNSAEVSTIGDDTSPSKSAEATTKLEELPSMDINDLLSLPREIKDTIIEILKKDDVSTIPASQTKAFPVTKGTYKPEQGTITTKKSKEVDVLKGRENDKLATQTKSEVPANESIAVPQEKASKPPVLHYIPLSRRKKGESPFAENSQNLAVGGVEILKESFTMPLTKMDKGGAKRIEKESIEACLLEKRTTEGFDQKAYKLMAKAGYDFTTRTEFKSKIFDERHGLSPTQRKLQKQ

Homology

[Close]

BLAST of PI0000825 vs. ExPASy TrEMBL
Match: A0A5A7TSN4 (Ty3-gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold114G00760 PE=4 SV=1)

HSP 1 Score: 360.9 bits (925), Expect = 7.5e-96
Identity = 237/521 (45.49%), Postives = 284/521 (54.51%), Query Frame = 0


Query: 49  IESRDAAESSHTYTTKNKDKGKAILQESSLIQFGSLEPVVVYSSPEILQKNDIRTVHPKE 108
           +E  D  +++H       +   + +   SLIQFGSLEPVV+YSSPE LQ ND R    KE
Sbjct: 205 LELDDVTQTNHAAVIIQSNSRLSAI--GSLIQFGSLEPVVIYSSPEDLQNNDFRADGLKE 264

Query: 109 EEKHVENADEGWTLVTRRKKHKQNYSKKESHLYREYKRKGKSQRRKTRKNARKFQPITKE 168
           EEK V+N +EGWTLVTRRKKHKQ++S+KES  YR Y  KGKSQRR TRKN RKF PI ++
Sbjct: 265 EEKQVDNVEEGWTLVTRRKKHKQSFSQKESGSYRTYMSKGKSQRRNTRKNLRKFLPIIEK 324

Query: 169 GEELPRSRQPITLKEFFAENFPFDIVSCHAVSTTEDDTSPSNSAEVSTIGDDTSPSKSAE 228
            E L R R+PI LK+FF +NFP +IVSCH  STTE+D  P N               + +
Sbjct: 325 SEGLSRPRRPIILKDFFPKNFPMEIVSCHTTSTTEEDAFPLN---------------AMK 384

Query: 229 ATTKLEELPSMDINDLLSLPREIKDTIIEILKKDDVSTIPASQTKA-------------- 288
            T + E+L S+ INDLL+L RE+KDTIIEILK DDVST   S TKA              
Sbjct: 385 ETPRPEDLLSLGINDLLTLSREVKDTIIEILKNDDVSTTVTSPTKACDSCCMSISFSDED 444

Query: 289 ------------------------------------------------------------ 348
                                                                       
Sbjct: 445 LLLGSKLHNRPLYVSGYVREQRLNQILIDNGSAVNILPKSTMNQLGISVEELSNSKLLIQ 504

Query: 349 --------------------------------------------------FPVTKGTYKP 408
                                                              PVTKGT+K 
Sbjct: 505 GFNQGAQRAIGTGIWKVDADSRPFTKAESHFADAKFYTKSEDVSEIISTEVPVTKGTFKN 564

Query: 409 EQGTITTKKSKEVDVLKGRENDKLATQTKSEVPANESIAVPQEKASKPPVLHYIPLSRRK 445
           EQ  IT+KK+ + D L  ++N +L T+TK   P  E IA  Q++ S PPVL YIPLSRRK
Sbjct: 565 EQEMITSKKTNKGDALNSQQNGELTTETKLRAPEAEKIATLQKEVSNPPVLRYIPLSRRK 624

[Close]

BLAST of PI0000825 vs. ExPASy TrEMBL
Match: A0A5A7UJR2 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold135G001080 PE=4 SV=1)

HSP 1 Score: 349.4 bits (895), Expect = 2.3e-92
Identity = 293/867 (33.79%), Postives = 340/867 (39.22%), Query Frame = 0


Query: 1   MPPPNIMSVMVTDVDTSEDRMAELEKKVNMLLKAVEERDYEIASLRNHIESRDAAESSHT 60
           +P PNIMSVMVTDVDTSEDRMA+LEKKVNM +K VEERD+EIA L+NHIESRDAAESSHT
Sbjct: 76  VPQPNIMSVMVTDVDTSEDRMADLEKKVNMFMKGVEERDFEIALLKNHIESRDAAESSHT 135

Query: 61  YTTKNKDKGKAILQES-------------------------------------------- 120
           +T KN +KGKAI+QES                                            
Sbjct: 136 HTIKNANKGKAIMQESQPQNSTSIASLSVQKLQEMIANSIKTQYGRPAQTLMERAIQNNM 195

Query: 121 ------------------------------------------------------------ 180
                                                                       
Sbjct: 196 LLISSKLMKLLGIKPRTFEELATRAQDMELSIANRGNNDLLVPEVRKEKKEVKSTQKVLK 255

Query: 181 ------------------------------------------------------------ 240
                                                                       
Sbjct: 256 GATKEAMVVSTTPLKLVSKEKKMEKRQDEGKKRRPTLKERQEKIYPFPDSDLPDMLDQLL 315

Query: 241 ------------------------------------------------------------ 300
                                                                       
Sbjct: 316 EKQLIQLPECKRPAEMGKVNDPNYCKYHRVISHPVEKCFVLKELILKLALDKKIELELDD 375

Query: 301 ---------------------SLIQFGSLEPVVVYSSPEILQKNDIRTVHPKEEEKHVEN 360
                                SLIQFGSLE +V+YSSPE LQ ND RT  PKEEEK V+N
Sbjct: 376 VAQTNHAAVIIQSDSRLSIIGSLIQFGSLELIVIYSSPEDLQNNDFRTDSPKEEEKQVDN 435

Query: 361 ADEGWTLVTRRKKHKQNYSKKESHLYREYKRKGKSQRRKTRKNARKFQPITKEGEELPRS 420
            +EGWTLVTRRKK KQ++S+KES  YR Y+ KGKSQRR TRKN RKF PI +E E L R 
Sbjct: 436 VEEGWTLVTRRKKRKQSFSQKESGSYRTYRSKGKSQRRNTRKNLRKFLPIIEESEGLSRP 495

Query: 421 RQPITLKEFFAENFPFDIVSCHAVSTTEDDTSPSNSAEVSTIGDDTSPSKSAEATTKLEE 445
           R+PI LK+FF +NFP +I SCH  STTE+D  PSN               + E T K E+
Sbjct: 496 RRPIILKDFFPKNFPMEIFSCHTTSTTEEDAFPSN---------------AMEETPKPED 555

[Close]

BLAST of PI0000825 vs. ExPASy TrEMBL
Match: A0A5A7TZU9 (Ribonuclease H OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold498G00940 PE=4 SV=1)

HSP 1 Score: 347.8 bits (891), Expect = 6.6e-92
Identity = 243/574 (42.33%), Postives = 286/574 (49.83%), Query Frame = 0


Query: 49   IESRDAAESSHTYTTKNKDKGKAILQESSLIQFGSLEPVVVYSSPEILQKNDIRTVHPKE 108
            +E  D A+++H       D   + +   SLIQFGSLEPVV+YSSPE LQ ND R   PKE
Sbjct: 507  LELDDVAQTNHAAVIIQSDSRLSAI--GSLIQFGSLEPVVIYSSPEDLQNNDFRADGPKE 566

Query: 109  EEKHVENADEGWTLVTRRKKHKQNYSKKESHLYREYKRKGKSQRRKTRKNARKFQPITKE 168
            EEK V+N +EGWTLVTRRKK KQ++S+KES  YR Y+ KGKSQRR TRKN RKF PI +E
Sbjct: 567  EEKQVDNVEEGWTLVTRRKKRKQSFSQKESGAYRTYRSKGKSQRRNTRKNPRKFLPIIEE 626

Query: 169  GEELPRSRQPITLKEFFAENFPFDIVSCHAVSTTEDDTSPSNSAEVSTIGDDTSPSKSAE 228
             E L R R+PI LK+FF +NFP +IVSCH  STTE+D  PSN               + E
Sbjct: 627  SEGLSRPRRPIILKDFFPKNFPMEIVSCHTTSTTEEDACPSN---------------AME 686

Query: 229  ATTKLEELPSMDINDLLSLPREIKDTIIEILKKDDVSTIPASQ----------------- 288
             T K E+L  + INDLL+L RE+KDTIIEILK DDVSTI  S                  
Sbjct: 687  ETPKPEDLLPLGINDLLTLSREVKDTIIEILKNDDVSTIVTSPAMTYDSSCMSISFSDED 746

Query: 289  ------------------------------------------------------------ 348
                                                                        
Sbjct: 747  LLLGSKLHNRPLYVSGFVREQKLNQILIDNGSAVNILPKSTMNQLGISVEELSNSKLVIQ 806

Query: 349  ------------------------------------------------------------ 408
                                                                        
Sbjct: 807  GFNQGAQRAIGTVRLEVVIGDLQASTIFHVIDSRTTYKMLLGRPWIHENGIVTSTLHQCF 866

Query: 409  -----------------TKA-----------------------FPVTKGTYKPEQGTITT 445
                             TKA                        PVTKGT+K EQ  IT+
Sbjct: 867  KFYKQGIKKVDADSRPFTKAESHFADAKFYTKSEDVSEIISTEVPVTKGTFKNEQEMITS 926

[Close]

BLAST of PI0000825 vs. ExPASy TrEMBL
Match: A0A5A7TZU9 (Ribonuclease H OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold498G00940 PE=4 SV=1)

HSP 1 Score: 127.1 bits (318), Expect = 1.8e-25
Identity = 71/103 (68.93%), Postives = 83/103 (80.58%), Query Frame = 0


Query: 1   MPPPNIMSVMVTDVDTSEDRMAELEKKVNMLLKAVEERDYEIASLRNHIESRDAAESSHT 60
           +P PNIMSVMVTDVDTSEDRMAELEKKVNML+KAVEERD+EIA L+NHIESRDAAESSHT
Sbjct: 76  VPQPNIMSVMVTDVDTSEDRMAELEKKVNMLMKAVEERDFEIALLKNHIESRDAAESSHT 135

Query: 61  YTTKNKDKGKAILQESSLIQFGSLEPVVVYSSPEILQKNDIRT 104
           +T KN +KGKAI+QES      S+  + V    E++  N I+T
Sbjct: 136 HTIKNANKGKAIMQESQPQNSTSIASLSVQQLQEMI-ANSIKT 177

HSP 2 Score: 347.8 bits (891), Expect = 6.6e-92
Identity = 232/513 (45.22%), Postives = 278/513 (54.19%), Query Frame = 0


Query: 49  IESRDAAESSHTYTTKNKDKGKAILQESSLIQFGSLEPVVVYSSPEILQKNDIRTVHPKE 108
           +E  D A+++H       D   + +   SLIQFGSLEPVV+YSSPE LQ ND R   PKE
Sbjct: 110 LELDDMAQTNHVAVIIQSDSRLSAI--GSLIQFGSLEPVVIYSSPEDLQNNDFRADGPKE 169

Query: 109 EEKHVENADEGWTLVTRRKKHKQNYSKKESHLYREYKRKGKSQRRKTRKNARKFQPITKE 168
           EEK V+N +EGWTLV RRKK KQ++S+KES   R Y+ KGKSQRR TRKN RKF PI +E
Sbjct: 170 EEKQVDNVEEGWTLVMRRKKRKQSFSQKESGSCRTYRSKGKSQRRNTRKNLRKFLPIIEE 229

Query: 169 GEELPRSRQPITLKEFFAENFPFDIVSCHAVSTTEDDTSPSNSAEVSTIGDDTSPSKSAE 228
            E L R R+PI LK+FF +NFP +IVSCH  S TE+D  PSN               + E
Sbjct: 230 SEGLSRPRRPIILKDFFPKNFPMEIVSCHTTSITEEDAFPSN---------------AME 289

Query: 229 ATTKLEELPSMDINDLLSLPREIKDTIIEILKKDDVSTIPASQTKAF------------- 288
            T K E+L  + INDLL+L RE+KDTIIEILK DDVSTI +S T+ +             
Sbjct: 290 ETPKPEDLLPLGINDLLTLSREVKDTIIEILKNDDVSTIVSSPTEVYDSCCMSISFSDED 349

Query: 289 ------------------------------------------------------------ 348
                                                                       
Sbjct: 350 LLLGSKLHNRPLYVLGYVREQKLNQILIDNGSVVNILPKSTMNQLGTIRLEIVIGDLQAS 409

Query: 349 -------------------------------------------PVTKGTYKPEQGTITTK 408
                                                      PVTKGT+K EQ  IT+K
Sbjct: 410 TIFHVIDSRTTYKMPFTKAEPHLADAKFYTKSEDVSEIISTEVPVTKGTFKNEQEMITSK 469

Query: 409 KSKEVDVLKGRENDKLATQTKSEVPANESIAVPQEKASKPPVLHYIPLSRRKKGESPFAE 445
           KS + D   G++N +  T+TK +    E IA  Q++ S P VL YIPLSRRK GES FAE
Sbjct: 470 KSNKGDAPNGQQNGESTTETKLKAREAEKIATLQKEVSNPSVLRYIPLSRRKNGESAFAE 529

[Close]

BLAST of PI0000825 vs. ExPASy TrEMBL
Match: A0A5D3BIH8 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold180G001270 PE=4 SV=1)

HSP 1 Score: 347.8 bits (891), Expect = 6.6e-92
Identity = 243/574 (42.33%), Postives = 286/574 (49.83%), Query Frame = 0


Query: 49   IESRDAAESSHTYTTKNKDKGKAILQESSLIQFGSLEPVVVYSSPEILQKNDIRTVHPKE 108
            +E  D A+++H       D   + +   SLIQFGSLEPVV+YSSPE LQ ND R   PKE
Sbjct: 485  LELDDVAQTNHAAVIIQSDSRLSAI--GSLIQFGSLEPVVIYSSPEDLQNNDFRADGPKE 544

Query: 109  EEKHVENADEGWTLVTRRKKHKQNYSKKESHLYREYKRKGKSQRRKTRKNARKFQPITKE 168
            EEK V+N +EGWTLVTRRKK KQ++S+KES  YR Y+ KGKSQRR TRKN RKF PI +E
Sbjct: 545  EEKQVDNVEEGWTLVTRRKKRKQSFSQKESGAYRTYRSKGKSQRRNTRKNPRKFLPIIEE 604

Query: 169  GEELPRSRQPITLKEFFAENFPFDIVSCHAVSTTEDDTSPSNSAEVSTIGDDTSPSKSAE 228
             E L R R+PI LK+FF +NFP +IVSCH  STTE+D  PSN               + E
Sbjct: 605  SEGLSRPRRPIILKDFFPKNFPMEIVSCHTTSTTEEDACPSN---------------AME 664

Query: 229  ATTKLEELPSMDINDLLSLPREIKDTIIEILKKDDVSTIPASQ----------------- 288
             T K E+L  + INDLL+L RE+KDTIIEILK DDVSTI  S                  
Sbjct: 665  ETPKPEDLLPLGINDLLTLSREVKDTIIEILKNDDVSTIVTSPAMTYDSSCMSISFSDED 724

Query: 289  ------------------------------------------------------------ 348
                                                                        
Sbjct: 725  LLLGSKLHNRPLYVSGFVREQKLNQILIDNGSAVNILPKSTMNQLGISVEELSNSKLVIQ 784

Query: 349  ------------------------------------------------------------ 408
                                                                        
Sbjct: 785  GFNQGAQRAIGTVRLEVVIGDLQASTIFHVIDSRTTYKMLLGRPWIHENGIVTSTLHQCF 844

Query: 409  -----------------TKA-----------------------FPVTKGTYKPEQGTITT 445
                             TKA                        PVTKGT+K EQ  IT+
Sbjct: 845  KFYKQGIKKVDADSRPFTKAESHFADAKFYTKSEDVSEIISTEVPVTKGTFKNEQEMITS 904

[Close]

BLAST of PI0000825 vs. NCBI nr
Match: KAA0046553.1 (ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 360.9 bits (925), Expect = 1.6e-95
Identity = 237/521 (45.49%), Postives = 284/521 (54.51%), Query Frame = 0


Query: 49  IESRDAAESSHTYTTKNKDKGKAILQESSLIQFGSLEPVVVYSSPEILQKNDIRTVHPKE 108
           +E  D  +++H       +   + +   SLIQFGSLEPVV+YSSPE LQ ND R    KE
Sbjct: 205 LELDDVTQTNHAAVIIQSNSRLSAI--GSLIQFGSLEPVVIYSSPEDLQNNDFRADGLKE 264

Query: 109 EEKHVENADEGWTLVTRRKKHKQNYSKKESHLYREYKRKGKSQRRKTRKNARKFQPITKE 168
           EEK V+N +EGWTLVTRRKKHKQ++S+KES  YR Y  KGKSQRR TRKN RKF PI ++
Sbjct: 265 EEKQVDNVEEGWTLVTRRKKHKQSFSQKESGSYRTYMSKGKSQRRNTRKNLRKFLPIIEK 324

Query: 169 GEELPRSRQPITLKEFFAENFPFDIVSCHAVSTTEDDTSPSNSAEVSTIGDDTSPSKSAE 228
            E L R R+PI LK+FF +NFP +IVSCH  STTE+D  P N               + +
Sbjct: 325 SEGLSRPRRPIILKDFFPKNFPMEIVSCHTTSTTEEDAFPLN---------------AMK 384

Query: 229 ATTKLEELPSMDINDLLSLPREIKDTIIEILKKDDVSTIPASQTKA-------------- 288
            T + E+L S+ INDLL+L RE+KDTIIEILK DDVST   S TKA              
Sbjct: 385 ETPRPEDLLSLGINDLLTLSREVKDTIIEILKNDDVSTTVTSPTKACDSCCMSISFSDED 444

Query: 289 ------------------------------------------------------------ 348
                                                                       
Sbjct: 445 LLLGSKLHNRPLYVSGYVREQRLNQILIDNGSAVNILPKSTMNQLGISVEELSNSKLLIQ 504

Query: 349 --------------------------------------------------FPVTKGTYKP 408
                                                              PVTKGT+K 
Sbjct: 505 GFNQGAQRAIGTGIWKVDADSRPFTKAESHFADAKFYTKSEDVSEIISTEVPVTKGTFKN 564

Query: 409 EQGTITTKKSKEVDVLKGRENDKLATQTKSEVPANESIAVPQEKASKPPVLHYIPLSRRK 445
           EQ  IT+KK+ + D L  ++N +L T+TK   P  E IA  Q++ S PPVL YIPLSRRK
Sbjct: 565 EQEMITSKKTNKGDALNSQQNGELTTETKLRAPEAEKIATLQKEVSNPPVLRYIPLSRRK 624

[Close]

BLAST of PI0000825 vs. NCBI nr
Match: KAA0053731.1 (uncharacterized protein E6C27_scaffold135G001080 [Cucumis melo var. makuwa])

HSP 1 Score: 349.4 bits (895), Expect = 4.7e-92
Identity = 293/867 (33.79%), Postives = 340/867 (39.22%), Query Frame = 0


Query: 1   MPPPNIMSVMVTDVDTSEDRMAELEKKVNMLLKAVEERDYEIASLRNHIESRDAAESSHT 60
           +P PNIMSVMVTDVDTSEDRMA+LEKKVNM +K VEERD+EIA L+NHIESRDAAESSHT
Sbjct: 76  VPQPNIMSVMVTDVDTSEDRMADLEKKVNMFMKGVEERDFEIALLKNHIESRDAAESSHT 135

Query: 61  YTTKNKDKGKAILQES-------------------------------------------- 120
           +T KN +KGKAI+QES                                            
Sbjct: 136 HTIKNANKGKAIMQESQPQNSTSIASLSVQKLQEMIANSIKTQYGRPAQTLMERAIQNNM 195

Query: 121 ------------------------------------------------------------ 180
                                                                       
Sbjct: 196 LLISSKLMKLLGIKPRTFEELATRAQDMELSIANRGNNDLLVPEVRKEKKEVKSTQKVLK 255

Query: 181 ------------------------------------------------------------ 240
                                                                       
Sbjct: 256 GATKEAMVVSTTPLKLVSKEKKMEKRQDEGKKRRPTLKERQEKIYPFPDSDLPDMLDQLL 315

Query: 241 ------------------------------------------------------------ 300
                                                                       
Sbjct: 316 EKQLIQLPECKRPAEMGKVNDPNYCKYHRVISHPVEKCFVLKELILKLALDKKIELELDD 375

Query: 301 ---------------------SLIQFGSLEPVVVYSSPEILQKNDIRTVHPKEEEKHVEN 360
                                SLIQFGSLE +V+YSSPE LQ ND RT  PKEEEK V+N
Sbjct: 376 VAQTNHAAVIIQSDSRLSIIGSLIQFGSLELIVIYSSPEDLQNNDFRTDSPKEEEKQVDN 435

Query: 361 ADEGWTLVTRRKKHKQNYSKKESHLYREYKRKGKSQRRKTRKNARKFQPITKEGEELPRS 420
            +EGWTLVTRRKK KQ++S+KES  YR Y+ KGKSQRR TRKN RKF PI +E E L R 
Sbjct: 436 VEEGWTLVTRRKKRKQSFSQKESGSYRTYRSKGKSQRRNTRKNLRKFLPIIEESEGLSRP 495

Query: 421 RQPITLKEFFAENFPFDIVSCHAVSTTEDDTSPSNSAEVSTIGDDTSPSKSAEATTKLEE 445
           R+PI LK+FF +NFP +I SCH  STTE+D  PSN               + E T K E+
Sbjct: 496 RRPIILKDFFPKNFPMEIFSCHTTSTTEEDAFPSN---------------AMEETPKPED 555

[Close]

BLAST of PI0000825 vs. NCBI nr
Match: TYJ98225.1 (uncharacterized protein E5676_scaffold180G001270 [Cucumis melo var. makuwa])

HSP 1 Score: 347.8 bits (891), Expect = 1.4e-91
Identity = 243/574 (42.33%), Postives = 286/574 (49.83%), Query Frame = 0


Query: 49   IESRDAAESSHTYTTKNKDKGKAILQESSLIQFGSLEPVVVYSSPEILQKNDIRTVHPKE 108
            +E  D A+++H       D   + +   SLIQFGSLEPVV+YSSPE LQ ND R   PKE
Sbjct: 485  LELDDVAQTNHAAVIIQSDSRLSAI--GSLIQFGSLEPVVIYSSPEDLQNNDFRADGPKE 544

Query: 109  EEKHVENADEGWTLVTRRKKHKQNYSKKESHLYREYKRKGKSQRRKTRKNARKFQPITKE 168
            EEK V+N +EGWTLVTRRKK KQ++S+KES  YR Y+ KGKSQRR TRKN RKF PI +E
Sbjct: 545  EEKQVDNVEEGWTLVTRRKKRKQSFSQKESGAYRTYRSKGKSQRRNTRKNPRKFLPIIEE 604

Query: 169  GEELPRSRQPITLKEFFAENFPFDIVSCHAVSTTEDDTSPSNSAEVSTIGDDTSPSKSAE 228
             E L R R+PI LK+FF +NFP +IVSCH  STTE+D  PSN               + E
Sbjct: 605  SEGLSRPRRPIILKDFFPKNFPMEIVSCHTTSTTEEDACPSN---------------AME 664

Query: 229  ATTKLEELPSMDINDLLSLPREIKDTIIEILKKDDVSTIPASQ----------------- 288
             T K E+L  + INDLL+L RE+KDTIIEILK DDVSTI  S                  
Sbjct: 665  ETPKPEDLLPLGINDLLTLSREVKDTIIEILKNDDVSTIVTSPAMTYDSSCMSISFSDED 724

Query: 289  ------------------------------------------------------------ 348
                                                                        
Sbjct: 725  LLLGSKLHNRPLYVSGFVREQKLNQILIDNGSAVNILPKSTMNQLGISVEELSNSKLVIQ 784

Query: 349  ------------------------------------------------------------ 408
                                                                        
Sbjct: 785  GFNQGAQRAIGTVRLEVVIGDLQASTIFHVIDSRTTYKMLLGRPWIHENGIVTSTLHQCF 844

Query: 409  -----------------TKA-----------------------FPVTKGTYKPEQGTITT 445
                             TKA                        PVTKGT+K EQ  IT+
Sbjct: 845  KFYKQGIKKVDADSRPFTKAESHFADAKFYTKSEDVSEIISTEVPVTKGTFKNEQEMITS 904

[Close]

BLAST of PI0000825 vs. NCBI nr
Match: TYJ98225.1 (uncharacterized protein E5676_scaffold180G001270 [Cucumis melo var. makuwa])

HSP 1 Score: 119.8 bits (299), Expect = 6.0e-23
Identity = 69/112 (61.61%), Postives = 83/112 (74.11%), Query Frame = 0


Query: 1   MPPPNIMSVMVTDVDTSEDRMAELEKKVNMLLKAVEERDYEIASLRNHIESRDAAESSHT 60
           +P PNIMSVMVTDVDTSEDRM  LEKKVNM +KAVEERD+EIA L+NHIESRDAAESSHT
Sbjct: 76  VPQPNIMSVMVTDVDTSEDRMVVLEKKVNMHMKAVEERDFEIALLKNHIESRDAAESSHT 135

Query: 61  YTTKNKDKGKAILQESSLIQFGSLEPVVVYSSPEILQKNDIRTVHPKEEEKH 113
           +T KN +KGKAI+QES      S+  + V    E++  N I+T +    + H
Sbjct: 136 HTIKNANKGKAIMQESQPQNSTSIASLSVQQLQEMI-ANSIKTQYGGPAQTH 186

HSP 2 Score: 347.8 bits (891), Expect = 1.4e-91
Identity = 243/574 (42.33%), Postives = 286/574 (49.83%), Query Frame = 0


Query: 49   IESRDAAESSHTYTTKNKDKGKAILQESSLIQFGSLEPVVVYSSPEILQKNDIRTVHPKE 108
            +E  D A+++H       D   + +   SLIQFGSLEPVV+YSSPE LQ ND R   PKE
Sbjct: 507  LELDDVAQTNHAAVIIQSDSRLSAI--GSLIQFGSLEPVVIYSSPEDLQNNDFRADGPKE 566

Query: 109  EEKHVENADEGWTLVTRRKKHKQNYSKKESHLYREYKRKGKSQRRKTRKNARKFQPITKE 168
            EEK V+N +EGWTLVTRRKK KQ++S+KES  YR Y+ KGKSQRR TRKN RKF PI +E
Sbjct: 567  EEKQVDNVEEGWTLVTRRKKRKQSFSQKESGAYRTYRSKGKSQRRNTRKNPRKFLPIIEE 626

Query: 169  GEELPRSRQPITLKEFFAENFPFDIVSCHAVSTTEDDTSPSNSAEVSTIGDDTSPSKSAE 228
             E L R R+PI LK+FF +NFP +IVSCH  STTE+D  PSN               + E
Sbjct: 627  SEGLSRPRRPIILKDFFPKNFPMEIVSCHTTSTTEEDACPSN---------------AME 686

Query: 229  ATTKLEELPSMDINDLLSLPREIKDTIIEILKKDDVSTIPASQ----------------- 288
             T K E+L  + INDLL+L RE+KDTIIEILK DDVSTI  S                  
Sbjct: 687  ETPKPEDLLPLGINDLLTLSREVKDTIIEILKNDDVSTIVTSPAMTYDSSCMSISFSDED 746

Query: 289  ------------------------------------------------------------ 348
                                                                        
Sbjct: 747  LLLGSKLHNRPLYVSGFVREQKLNQILIDNGSAVNILPKSTMNQLGISVEELSNSKLVIQ 806

Query: 349  ------------------------------------------------------------ 408
                                                                        
Sbjct: 807  GFNQGAQRAIGTVRLEVVIGDLQASTIFHVIDSRTTYKMLLGRPWIHENGIVTSTLHQCF 866

Query: 409  -----------------TKA-----------------------FPVTKGTYKPEQGTITT 445
                             TKA                        PVTKGT+K EQ  IT+
Sbjct: 867  KFYKQGIKKVDADSRPFTKAESHFADAKFYTKSEDVSEIISTEVPVTKGTFKNEQEMITS 926

[Close]

BLAST of PI0000825 vs. NCBI nr
Match: KAA0047477.1 (uncharacterized protein E6C27_scaffold498G00940 [Cucumis melo var. makuwa])

HSP 1 Score: 127.1 bits (318), Expect = 3.8e-25
Identity = 71/103 (68.93%), Postives = 83/103 (80.58%), Query Frame = 0


Query: 1   MPPPNIMSVMVTDVDTSEDRMAELEKKVNMLLKAVEERDYEIASLRNHIESRDAAESSHT 60
           +P PNIMSVMVTDVDTSEDRMAELEKKVNML+KAVEERD+EIA L+NHIESRDAAESSHT
Sbjct: 76  VPQPNIMSVMVTDVDTSEDRMAELEKKVNMLMKAVEERDFEIALLKNHIESRDAAESSHT 135

Query: 61  YTTKNKDKGKAILQESSLIQFGSLEPVVVYSSPEILQKNDIRT 104
           +T KN +KGKAI+QES      S+  + V    E++  N I+T
Sbjct: 136 HTIKNANKGKAIMQESQPQNSTSIASLSVQQLQEMI-ANSIKT 177

HSP 2 Score: 347.8 bits (891), Expect = 1.4e-91
Identity = 243/574 (42.33%), Postives = 286/574 (49.83%), Query Frame = 0


Query: 49  IESRDAAESSHTYTTKNKDKGKAILQESSLIQFGSLEPVVVYSSPEILQKNDIRTVHPKE 108
           +E  D A+++H       D   + +   SLIQFGSLEPVV+YSSPE LQ ND R   PKE
Sbjct: 437 LELDDVAQTNHAAVIIQSDSRLSAI--GSLIQFGSLEPVVIYSSPEDLQNNDFRADGPKE 496

Query: 109 EEKHVENADEGWTLVTRRKKHKQNYSKKESHLYREYKRKGKSQRRKTRKNARKFQPITKE 168
           EEK V+N +EGWTLVTRRKK KQ++S+KES  YR Y+ KGKSQRR TRKN RKF PI +E
Sbjct: 497 EEKQVDNVEEGWTLVTRRKKRKQSFSQKESGAYRTYRSKGKSQRRNTRKNPRKFLPIIEE 556

Query: 169 GEELPRSRQPITLKEFFAENFPFDIVSCHAVSTTEDDTSPSNSAEVSTIGDDTSPSKSAE 228
            E L R R+PI LK+FF +NFP +IVSCH  STTE+D  PSN               + E
Sbjct: 557 SEGLSRPRRPIILKDFFPKNFPMEIVSCHTTSTTEEDACPSN---------------AME 616

Query: 229 ATTKLEELPSMDINDLLSLPREIKDTIIEILKKDDVSTIPASQ----------------- 288
            T K E+L  + INDLL+L RE+KDTIIEILK DDVSTI  S                  
Sbjct: 617 ETPKPEDLLPLGINDLLTLSREVKDTIIEILKNDDVSTIVTSPAMTYDSSCMSISFSDED 676

Query: 289 ------------------------------------------------------------ 348
                                                                       
Sbjct: 677 LLLGSKLHNRPLYVSGFVREQKLNQILIDNGSAVNILPKSTMNQLGISVEELSNSKLVIQ 736

Query: 349 ------------------------------------------------------------ 408
                                                                       
Sbjct: 737 GFNQGAQRAIGTVRLEVVIGDLQASTIFHVIDSRTTYKMLLGRPWIHENGIVTSTLHQCF 796

Query: 409 -----------------TKA-----------------------FPVTKGTYKPEQGTITT 445
                            TKA                        PVTKGT+K EQ  IT+
Sbjct: 797 KFYKQGIKKVDADSRPFTKAESHFADAKFYTKSEDVSEIISTEVPVTKGTFKNEQEMITS 856

The following BLAST results are available for this feature:

BLAST of PI0000825 vs.


Match Name	E-value	Identity	Description

BLAST of PI0000825 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7TSN4	7.5e-96	45.49	Ty3-gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2...	[more]
A0A5A7UJR2	2.3e-92	33.79	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold13...	[more]
A0A5A7TZU9	6.6e-92	42.33	Ribonuclease H OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold498G00940...	[more]
A0A5A7TZU9	1.8e-25	68.93	Ribonuclease H OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold498G00940...	[more]
A0A5D3BIH8	6.6e-92	42.33	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]

Pages

BLAST of PI0000825 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0046553.1	1.6e-95	45.49	ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]	[more]
KAA0053731.1	4.7e-92	33.79	uncharacterized protein E6C27_scaffold135G001080 [Cucumis melo var. makuwa]	[more]
TYJ98225.1	1.4e-91	42.33	uncharacterized protein E5676_scaffold180G001270 [Cucumis melo var. makuwa]	[more]
TYJ98225.1	6.0e-23	61.61	uncharacterized protein E5676_scaffold180G001270 [Cucumis melo var. makuwa]	[more]
KAA0047477.1	3.8e-25	68.93	uncharacterized protein E6C27_scaffold498G00940 [Cucumis melo var. makuwa]	[more]

Pages

BLAST of PI0000825 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 14..34
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 145..160
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 126..174
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 200..229

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0000825.1	PI0000825.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006259	DNA metabolic process
molecular_function	GO:0140640	catalytic activity, acting on a nucleic acid
molecular_function	GO:0003676	nucleic acid binding