PI0000737 (gene) Melon (PI 482460) v1

Overview


Name	PI0000737
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	Gibberellin regulated protein
Location	chr04: 29637388 .. 29638240 (-)
RNA-Seq Expression	PI0000737
Synteny	PI0000737

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TCTTTCTCTCTTCATCTTAATACCATGGCAATTCCTAAAATCGTCGCTTGTCTTTTTGTGTCGTCTCTTCTTCTTCTTTGTTTTGTTGAAGCTGATGAAATGGTAAATTTAATATTATATTCTTAATTAAACGTGTTTTTAATCCTACAAAATTATTCTCATATTCAATTTGGATTTTAGGTCGATGATGTTGCAGCTATTCCCGTTAAGAGTCAAAATATTGGTAAGTTAATGTTATTTGGGATTATTTATTTGTTTTAAGTATTTTGATATATACAAAGATTGCGAAATTTGTGAAAATTATGTATGTGTGTGTACATATATATTTTAGATTGTGGAGGAGCTTGTGCATCGAGGTGCAAATTATCATCAAGGCCGAACTTGTGCAAGAGGGCATGTGGCACGTGCTGTGCTCGTTGTAGCTGCGTGCCGCCGGGCACTTTCGGAAACTATGAAGCTTGTCCTTGCTACGCAAAACTCACCACTCATGGCGGCCGGCGAAAGTGTCCTTAAATTATTTCATTACAGATACTGTATTTAAAAGTCCGTCATAATTTCCCCCATGCAAAAATTTCTGTTCTGTTCTGTTTTTGTTCATTGTCATCTTCAACCTTTCTCAAGCTTTGATTAATAAATAAATTTTCAAAGAGTGTTTAATATAAGGAATTAATCTAAAATAAAATTTCTATATGGGAAAAAAATCAGATTTTTTTTCCCTCTCTTTTGTTTGTTTTTCCCAATTATGTGAGTCAATATACAAAACAAATATGAATTATATTCTTGTACGTTACAAGTGTTTTTTTATTTGTATGTGTAATAAAACTACAATTAATTGATCAAAACTTTATTGAAA

mRNA sequence

TCTTTCTCTCTTCATCTTAATACCATGGCAATTCCTAAAATCGTCGCTTGTCTTTTTGTGTCGTCTCTTCTTCTTCTTTGTTTTGTTGAAGCTGATGAAATGGTCGATGATGTTGCAGCTATTCCCGTTAAGAGTCAAAATATTGATTGTGGAGGAGCTTGTGCATCGAGGTGCAAATTATCATCAAGGCCGAACTTGTGCAAGAGGGCATGTGGCACGTGCTGTGCTCGTTGTAGCTGCGTGCCGCCGGGCACTTTCGGAAACTATGAAGCTTGTCCTTGCTACGCAAAACTCACCACTCATGGCGGCCGGCGAAAGTGTCCTTAAATTATTTCATTACAGATACTGTATTTAAAAGTCCGTCATAATTTCCCCCATGCAAAAATTTCTGTTCTGTTCTGTTTTTGTTCATTGTCATCTTCAACCTTTCTCAAGCTTTGATTAATAAATAAATTTTCAAAGAGTGTTTAATATAAGGAATTAATCTAAAATAAAATTTCTATATGGGAAAAAAATCAGATTTTTTTTCCCTCTCTTTTGTTTGTTTTTCCCAATTATGTGAGTCAATATACAAAACAAATATGAATTATATTCTTGTACGTTACAAGTGTTTTTTTATTTGTATGTGTAATAAAACTACAATTAATTGATCAAAACTTTATTGAAA

Coding sequence (CDS)

ATGGCAATTCCTAAAATCGTCGCTTGTCTTTTTGTGTCGTCTCTTCTTCTTCTTTGTTTTGTTGAAGCTGATGAAATGGTCGATGATGTTGCAGCTATTCCCGTTAAGAGTCAAAATATTGATTGTGGAGGAGCTTGTGCATCGAGGTGCAAATTATCATCAAGGCCGAACTTGTGCAAGAGGGCATGTGGCACGTGCTGTGCTCGTTGTAGCTGCGTGCCGCCGGGCACTTTCGGAAACTATGAAGCTTGTCCTTGCTACGCAAAACTCACCACTCATGGCGGCCGGCGAAAGTGTCCTTAA

Protein sequence

MAIPKIVACLFVSSLLLLCFVEADEMVDDVAAIPVKSQNIDCGGACASRCKLSSRPNLCKRACGTCCARCSCVPPGTFGNYEACPCYAKLTTHGGRRKCP

Homology

[Close]

BLAST of PI0000737 vs. ExPASy Swiss-Prot
Match: Q93X17 (Snakin-2 OS=Solanum tuberosum OX=4113 GN=SN2 PE=1 SV=1)

HSP 1 Score: 121.3 bits (303), Expect = 6.1e-27
Identity = 60/104 (57.69%), Postives = 74/104 (71.15%), Query Frame = 0


Query: 1   MAIPKIVACLFVSSLLLL---CFVEADEMVDD-VAAIPVKSQNIDCGGACASRCKLSSRP 60
           MAI K +    + SLLLL     ++ D++  + ++      + IDCGGACA+RC+LSSRP
Sbjct: 1   MAISKALFASLLLSLLLLEQVQSIQTDQVTSNAISEAAYSYKKIDCGGACAARCRLSSRP 60

Query: 61  NLCKRACGTCCARCSCVPPGTFGNYEACPCYAKLTTHGGRRKCP 101
            LC RACGTCCARC+CVPPGT GN E CPCYA LTTHG +RKCP
Sbjct: 61  RLCNRACGTCCARCNCVPPGTSGNTETCPCYASLTTHGNKRKCP 104

[Close]

BLAST of PI0000737 vs. ExPASy Swiss-Prot
Match: P46689 (Gibberellin-regulated protein 1 OS=Arabidopsis thaliana OX=3702 GN=GASA1 PE=2 SV=2)

HSP 1 Score: 120.6 bits (301), Expect = 1.0e-26
Identity = 59/100 (59.00%), Postives = 72/100 (72.00%), Query Frame = 0


Query: 1   MAIPKIVACLFVSSLLLLCFVEADEMVDDVAAIPVKSQNIDCGGACASRCKLSSRPNLCK 60
           MAI K +    + SLL+L  V+AD  V++       ++ IDCG AC +RC+LS RP LC 
Sbjct: 1   MAISKALIASLLISLLVLQLVQAD--VENSQKKNGYAKKIDCGSACVARCRLSRRPRLCH 60

Query: 61  RACGTCCARCSCVPPGTFGNYEACPCYAKLTTHGGRRKCP 101
           RACGTCC RC+CVPPGT+GNY+ C CYA LTTHGGRRKCP
Sbjct: 61  RACGTCCYRCNCVPPGTYGNYDKCQCYASLTTHGGRRKCP 98

[Close]

BLAST of PI0000737 vs. ExPASy Swiss-Prot
Match: F4IQJ4 (Gibberellin-regulated protein 11 OS=Arabidopsis thaliana OX=3702 GN=GASA11 PE=3 SV=1)

HSP 1 Score: 119.0 bits (297), Expect = 3.0e-26
Identity = 58/100 (58.00%), Postives = 68/100 (68.00%), Query Frame = 0


Query: 1   MAIPKIVACLFVSSLLLLCFVEADEMVDDVAAIPVKSQNIDCGGACASRCKLSSRPNLCK 60
           MA+ +++    + SLL+L FV AD +  + A        IDC   C  RC LSSRPNLC 
Sbjct: 1   MAVFRVLLASLLISLLVLDFVHADMVTSNDA------PKIDCNSRCQERCSLSSRPNLCH 60

Query: 61  RACGTCCARCSCVPPGTFGNYEACPCYAKLTTHGGRRKCP 101
           RACGTCCARC+CV PGT GNY+ CPCY  LTTHGGRRKCP
Sbjct: 61  RACGTCCARCNCVAPGTSGNYDKCPCYGSLTTHGGRRKCP 94

[Close]

BLAST of PI0000737 vs. ExPASy Swiss-Prot
Match: P46687 (Gibberellin-regulated protein 3 OS=Arabidopsis thaliana OX=3702 GN=GASA3 PE=2 SV=1)

HSP 1 Score: 102.8 bits (255), Expect = 2.3e-21
Identity = 43/61 (70.49%), Postives = 47/61 (77.05%), Query Frame = 0


Query: 40  IDCGGACASRCKLSSRPNLCKRACGTCCARCSCVPPGTFGNYEACPCYAKLTTHGGRRKC 99
           IDCGG C  RC  SSRPNLC RAC +CC RC+CVPPGT GN+  CPCYA +TT GGR KC
Sbjct: 39  IDCGGRCKGRCSKSSRPNLCLRACNSCCYRCNCVPPGTAGNHHLCPCYASITTRGGRLKC 98

Query: 100 P 101
           P
Sbjct: 99  P 99

[Close]

BLAST of PI0000737 vs. ExPASy Swiss-Prot
Match: P46688 (Gibberellin-regulated protein 2 OS=Arabidopsis thaliana OX=3702 GN=GASA2 PE=2 SV=1)

HSP 1 Score: 99.4 bits (246), Expect = 2.5e-20
Identity = 50/97 (51.55%), Postives = 59/97 (60.82%), Query Frame = 0


Query: 10  LFVSSLLLLCFV------EADEMVDDVAAIPVKSQNIDCGGACASRCKLSSRPNLCKRAC 69
           +F S+L+LL  +      E      D A +      IDCGG C  RC  SSR  LC RAC
Sbjct: 3   VFRSTLVLLLIIVCLTTYELHVHAADGAKVGEGVVKIDCGGRCKDRCSKSSRTKLCLRAC 62

Query: 70  GTCCARCSCVPPGTFGNYEACPCYAKLTTHGGRRKCP 101
            +CC+RC+CVPPGT GN   CPCYA +TTHGGR KCP
Sbjct: 63  NSCCSRCNCVPPGTSGNTHLCPCYASITTHGGRLKCP 99

[Close]

BLAST of PI0000737 vs. ExPASy TrEMBL
Match: A0A5D3E7E4 (Gibberellin-regulated protein 11-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G008070 PE=3 SV=1)

HSP 1 Score: 177.9 bits (450), Expect = 2.0e-41
Identity = 84/100 (84.00%), Postives = 89/100 (89.00%), Query Frame = 0


Query: 1   MAIPKIVACLFVSSLLLLCFVEADEMVDDVAAIPVKSQNIDCGGACASRCKLSSRPNLCK 60
           MAIPKI+ CL   SLL+LCFVEAD+MV  VAA P  +QNI+CGGACASRCKLSSRPNLCK
Sbjct: 1   MAIPKIIPCLVAMSLLVLCFVEADDMVVGVAASPTLTQNINCGGACASRCKLSSRPNLCK 60

Query: 61  RACGTCCARCSCVPPGTFGNYEACPCYAKLTTHGGRRKCP 101
           RACGTCCARCSCVPPGT GNY ACPCYAKLTTHGGRRKCP
Sbjct: 61  RACGTCCARCSCVPPGTSGNYGACPCYAKLTTHGGRRKCP 100

[Close]

BLAST of PI0000737 vs. ExPASy TrEMBL
Match: A0A1S3CSM7 (gibberellin-regulated protein 11-like OS=Cucumis melo OX=3656 GN=LOC103503872 PE=3 SV=1)

HSP 1 Score: 177.9 bits (450), Expect = 2.0e-41
Identity = 84/100 (84.00%), Postives = 89/100 (89.00%), Query Frame = 0


Query: 1   MAIPKIVACLFVSSLLLLCFVEADEMVDDVAAIPVKSQNIDCGGACASRCKLSSRPNLCK 60
           MAIPKI+ CL   SLL+LCFVEAD+MV  VAA P  +QNI+CGGACASRCKLSSRPNLCK
Sbjct: 1   MAIPKIIPCLVAMSLLVLCFVEADDMVVGVAASPTLTQNINCGGACASRCKLSSRPNLCK 60

Query: 61  RACGTCCARCSCVPPGTFGNYEACPCYAKLTTHGGRRKCP 101
           RACGTCCARCSCVPPGT GNY ACPCYAKLTTHGGRRKCP
Sbjct: 61  RACGTCCARCSCVPPGTSGNYGACPCYAKLTTHGGRRKCP 100

[Close]

BLAST of PI0000737 vs. ExPASy TrEMBL
Match: A0A0A0LDK8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G872170 PE=3 SV=1)

HSP 1 Score: 173.3 bits (438), Expect = 5.0e-40
Identity = 82/102 (80.39%), Postives = 89/102 (87.25%), Query Frame = 0


Query: 1   MAIPKIVACLFVSSLLLLCFVEADE--MVDDVAAIPVKSQNIDCGGACASRCKLSSRPNL 60
           MA+PKI+ CL  SSLL+LCFVEAD+  +V   A+ P K+QNIDCGGACASRCKLSSRPNL
Sbjct: 1   MALPKIIVCLLASSLLVLCFVEADDQMVVGVAASSPTKTQNIDCGGACASRCKLSSRPNL 60

Query: 61  CKRACGTCCARCSCVPPGTFGNYEACPCYAKLTTHGGRRKCP 101
           C RACGTCCARCSCVPPGT GNYEACPCYA LTTHGGRRKCP
Sbjct: 61  CHRACGTCCARCSCVPPGTSGNYEACPCYATLTTHGGRRKCP 102

[Close]

BLAST of PI0000737 vs. ExPASy TrEMBL
Match: A0A6J1CCE1 (gibberellin-regulated protein 11-like OS=Momordica charantia OX=3673 GN=LOC111010205 PE=3 SV=1)

HSP 1 Score: 149.1 bits (375), Expect = 1.0e-32
Identity = 70/95 (73.68%), Postives = 78/95 (82.11%), Query Frame = 0


Query: 6   IVACLFVSSLLLLCFVEADEMVDDVAAIPVKSQNIDCGGACASRCKLSSRPNLCKRACGT 65
           ++ C+F+ SLL+LCFV A E V+   A P K QNIDCGGACA RCKLSSRPNLCKRACGT
Sbjct: 10  LITCVFM-SLLVLCFVGAHEKVNGTTADPTKIQNIDCGGACAMRCKLSSRPNLCKRACGT 69

Query: 66  CCARCSCVPPGTFGNYEACPCYAKLTTHGGRRKCP 101
           CCARCSCVPPGT G Y+ACPCYA +TT GGR KCP
Sbjct: 70  CCARCSCVPPGTSGGYDACPCYAHITTRGGRPKCP 103

[Close]

BLAST of PI0000737 vs. ExPASy TrEMBL
Match: A0A6J1FJ01 (gibberellin-regulated protein 1-like OS=Cucurbita moschata OX=3662 GN=LOC111445908 PE=3 SV=1)

HSP 1 Score: 143.3 bits (360), Expect = 5.6e-31
Identity = 71/98 (72.45%), Postives = 79/98 (80.61%), Query Frame = 0


Query: 6   IVACLFVSSLLLLCFVEADEMVDD---VAAIPVKSQNIDCGGACASRCKLSSRPNLCKRA 65
           +V C+ + SLL++  V ADE V+    VAA P   Q+IDCGGACASRCKLSSRPNLCKRA
Sbjct: 10  LVTCVLM-SLLVVHLVAADEEVNSIHGVAAHPANIQSIDCGGACASRCKLSSRPNLCKRA 69

Query: 66  CGTCCARCSCVPPGTFGNYEACPCYAKLTTHGGRRKCP 101
           CGTCCARC+CVPPGT G YE CPCYA LTTHGGRRKCP
Sbjct: 70  CGTCCARCNCVPPGTSGGYETCPCYASLTTHGGRRKCP 106

[Close]

BLAST of PI0000737 vs. NCBI nr
Match: XP_008466478.1 (PREDICTED: gibberellin-regulated protein 11-like [Cucumis melo] >KAA0063284.1 gibberellin-regulated protein 11-like [Cucumis melo var. makuwa] >TYK31491.1 gibberellin-regulated protein 11-like [Cucumis melo var. makuwa])

HSP 1 Score: 177.9 bits (450), Expect = 4.2e-41
Identity = 84/100 (84.00%), Postives = 89/100 (89.00%), Query Frame = 0


Query: 1   MAIPKIVACLFVSSLLLLCFVEADEMVDDVAAIPVKSQNIDCGGACASRCKLSSRPNLCK 60
           MAIPKI+ CL   SLL+LCFVEAD+MV  VAA P  +QNI+CGGACASRCKLSSRPNLCK
Sbjct: 1   MAIPKIIPCLVAMSLLVLCFVEADDMVVGVAASPTLTQNINCGGACASRCKLSSRPNLCK 60

Query: 61  RACGTCCARCSCVPPGTFGNYEACPCYAKLTTHGGRRKCP 101
           RACGTCCARCSCVPPGT GNY ACPCYAKLTTHGGRRKCP
Sbjct: 61  RACGTCCARCSCVPPGTSGNYGACPCYAKLTTHGGRRKCP 100

[Close]

BLAST of PI0000737 vs. NCBI nr
Match: XP_004136382.1 (gibberellin-regulated protein 11 [Cucumis sativus] >KGN60035.1 hypothetical protein Csa_001480 [Cucumis sativus])

HSP 1 Score: 173.3 bits (438), Expect = 1.0e-39
Identity = 82/102 (80.39%), Postives = 89/102 (87.25%), Query Frame = 0


Query: 1   MAIPKIVACLFVSSLLLLCFVEADE--MVDDVAAIPVKSQNIDCGGACASRCKLSSRPNL 60
           MA+PKI+ CL  SSLL+LCFVEAD+  +V   A+ P K+QNIDCGGACASRCKLSSRPNL
Sbjct: 1   MALPKIIVCLLASSLLVLCFVEADDQMVVGVAASSPTKTQNIDCGGACASRCKLSSRPNL 60

Query: 61  CKRACGTCCARCSCVPPGTFGNYEACPCYAKLTTHGGRRKCP 101
           C RACGTCCARCSCVPPGT GNYEACPCYA LTTHGGRRKCP
Sbjct: 61  CHRACGTCCARCSCVPPGTSGNYEACPCYATLTTHGGRRKCP 102

[Close]

BLAST of PI0000737 vs. NCBI nr
Match: XP_038899682.1 (gibberellin-regulated protein 1-like isoform X1 [Benincasa hispida])

HSP 1 Score: 154.8 bits (390), Expect = 3.8e-34
Identity = 75/100 (75.00%), Postives = 82/100 (82.00%), Query Frame = 0


Query: 4   PKIVACLFVSSLLLLCFVEADEMV---DDVAAIPVKSQNIDCGGACASRCKLSSRPNLCK 63
           P I+A LF+SS L+   VEA++MV   D VA    K QNIDCGGACASRCKLSSRPNLCK
Sbjct: 6   PLIIAYLFISSFLVHTLVEANKMVNSIDGVATNTAKIQNIDCGGACASRCKLSSRPNLCK 65

Query: 64  RACGTCCARCSCVPPGTFGNYEACPCYAKLTTHGGRRKCP 101
           RACGTCCARCSCVPPGT G Y+ACPCYA +TTHGGRRKCP
Sbjct: 66  RACGTCCARCSCVPPGTSGGYDACPCYASMTTHGGRRKCP 105

[Close]

BLAST of PI0000737 vs. NCBI nr
Match: XP_022139249.1 (gibberellin-regulated protein 11-like [Momordica charantia])

HSP 1 Score: 149.1 bits (375), Expect = 2.1e-32
Identity = 70/95 (73.68%), Postives = 78/95 (82.11%), Query Frame = 0


Query: 6   IVACLFVSSLLLLCFVEADEMVDDVAAIPVKSQNIDCGGACASRCKLSSRPNLCKRACGT 65
           ++ C+F+ SLL+LCFV A E V+   A P K QNIDCGGACA RCKLSSRPNLCKRACGT
Sbjct: 10  LITCVFM-SLLVLCFVGAHEKVNGTTADPTKIQNIDCGGACAMRCKLSSRPNLCKRACGT 69

Query: 66  CCARCSCVPPGTFGNYEACPCYAKLTTHGGRRKCP 101
           CCARCSCVPPGT G Y+ACPCYA +TT GGR KCP
Sbjct: 70  CCARCSCVPPGTSGGYDACPCYAHITTRGGRPKCP 103

[Close]

BLAST of PI0000737 vs. NCBI nr
Match: XP_031283220.1 (snakin-2 [Pistacia vera])

HSP 1 Score: 147.5 bits (371), Expect = 6.1e-32
Identity = 69/95 (72.63%), Postives = 78/95 (82.11%), Query Frame = 0


Query: 6   IVACLFVSSLLLLCFVEADEMVDDVAAIPVKSQNIDCGGACASRCKLSSRPNLCKRACGT 65
           ++A LF+S LLLL  +EAD MV+  AA+   S  IDCGGAC +RC+LSSRP LCKRACGT
Sbjct: 7   LIASLFLSLLLLLHLLEADMMVNTDAALGYSSPKIDCGGACTARCRLSSRPRLCKRACGT 66

Query: 66  CCARCSCVPPGTFGNYEACPCYAKLTTHGGRRKCP 101
           CCARC+CVPPGT GNYE CPCYA LTTHGGRRKCP
Sbjct: 67  CCARCNCVPPGTAGNYEVCPCYASLTTHGGRRKCP 101

[Close]

BLAST of PI0000737 vs. TAIR 10
Match: AT1G75750.2 (GAST1 protein homolog 1 )

HSP 1 Score: 120.9 bits (302), Expect = 5.7e-28
Identity = 59/100 (59.00%), Postives = 70/100 (70.00%), Query Frame = 0


Query: 1   MAIPKIVACLFVSSLLLLCFVEADEMVDDVAAIPVKSQNIDCGGACASRCKLSSRPNLCK 60
           MAI K +    + SLL+L  V+ADE           ++ IDCG AC +RC+LS RP LC 
Sbjct: 1   MAISKALIASLLISLLVLQLVQADENSQKKNGY---AKKIDCGSACVARCRLSRRPRLCH 60

Query: 61  RACGTCCARCSCVPPGTFGNYEACPCYAKLTTHGGRRKCP 101
           RACGTCC RC+CVPPGT+GNY+ C CYA LTTHGGRRKCP
Sbjct: 61  RACGTCCYRCNCVPPGTYGNYDKCQCYASLTTHGGRRKCP 97

[Close]

BLAST of PI0000737 vs. TAIR 10
Match: AT1G75750.1 (GAST1 protein homolog 1 )

HSP 1 Score: 120.6 bits (301), Expect = 7.4e-28
Identity = 59/100 (59.00%), Postives = 72/100 (72.00%), Query Frame = 0


Query: 1   MAIPKIVACLFVSSLLLLCFVEADEMVDDVAAIPVKSQNIDCGGACASRCKLSSRPNLCK 60
           MAI K +    + SLL+L  V+AD  V++       ++ IDCG AC +RC+LS RP LC 
Sbjct: 1   MAISKALIASLLISLLVLQLVQAD--VENSQKKNGYAKKIDCGSACVARCRLSRRPRLCH 60

Query: 61  RACGTCCARCSCVPPGTFGNYEACPCYAKLTTHGGRRKCP 101
           RACGTCC RC+CVPPGT+GNY+ C CYA LTTHGGRRKCP
Sbjct: 61  RACGTCCYRCNCVPPGTYGNYDKCQCYASLTTHGGRRKCP 98

[Close]

BLAST of PI0000737 vs. TAIR 10
Match: AT2G18420.1 (Gibberellin-regulated family protein )

HSP 1 Score: 119.0 bits (297), Expect = 2.2e-27
Identity = 58/100 (58.00%), Postives = 68/100 (68.00%), Query Frame = 0


Query: 1   MAIPKIVACLFVSSLLLLCFVEADEMVDDVAAIPVKSQNIDCGGACASRCKLSSRPNLCK 60
           MA+ +++    + SLL+L FV AD +  + A        IDC   C  RC LSSRPNLC 
Sbjct: 1   MAVFRVLLASLLISLLVLDFVHADMVTSNDA------PKIDCNSRCQERCSLSSRPNLCH 60

Query: 61  RACGTCCARCSCVPPGTFGNYEACPCYAKLTTHGGRRKCP 101
           RACGTCCARC+CV PGT GNY+ CPCY  LTTHGGRRKCP
Sbjct: 61  RACGTCCARCNCVAPGTSGNYDKCPCYGSLTTHGGRRKCP 94

[Close]

BLAST of PI0000737 vs. TAIR 10
Match: AT4G09600.1 (GAST1 protein homolog 3 )

HSP 1 Score: 102.8 bits (255), Expect = 1.6e-22
Identity = 43/61 (70.49%), Postives = 47/61 (77.05%), Query Frame = 0


Query: 40  IDCGGACASRCKLSSRPNLCKRACGTCCARCSCVPPGTFGNYEACPCYAKLTTHGGRRKC 99
           IDCGG C  RC  SSRPNLC RAC +CC RC+CVPPGT GN+  CPCYA +TT GGR KC
Sbjct: 39  IDCGGRCKGRCSKSSRPNLCLRACNSCCYRCNCVPPGTAGNHHLCPCYASITTRGGRLKC 98

Query: 100 P 101
           P
Sbjct: 99  P 99

[Close]

BLAST of PI0000737 vs. TAIR 10
Match: AT4G09610.1 (GAST1 protein homolog 2 )

HSP 1 Score: 99.4 bits (246), Expect = 1.8e-21
Identity = 50/97 (51.55%), Postives = 59/97 (60.82%), Query Frame = 0


Query: 10  LFVSSLLLLCFV------EADEMVDDVAAIPVKSQNIDCGGACASRCKLSSRPNLCKRAC 69
           +F S+L+LL  +      E      D A +      IDCGG C  RC  SSR  LC RAC
Sbjct: 3   VFRSTLVLLLIIVCLTTYELHVHAADGAKVGEGVVKIDCGGRCKDRCSKSSRTKLCLRAC 62

Query: 70  GTCCARCSCVPPGTFGNYEACPCYAKLTTHGGRRKCP 101
            +CC+RC+CVPPGT GN   CPCYA +TTHGGR KCP
Sbjct: 63  NSCCSRCNCVPPGTSGNTHLCPCYASITTHGGRLKCP 99

The following BLAST results are available for this feature:

BLAST of PI0000737 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q93X17	6.1e-27	57.69	Snakin-2 OS=Solanum tuberosum OX=4113 GN=SN2 PE=1 SV=1	[more]
P46689	1.0e-26	59.00	Gibberellin-regulated protein 1 OS=Arabidopsis thaliana OX=3702 GN=GASA1 PE=2 SV...	[more]
F4IQJ4	3.0e-26	58.00	Gibberellin-regulated protein 11 OS=Arabidopsis thaliana OX=3702 GN=GASA11 PE=3 ...	[more]
P46687	2.3e-21	70.49	Gibberellin-regulated protein 3 OS=Arabidopsis thaliana OX=3702 GN=GASA3 PE=2 SV...	[more]
P46688	2.5e-20	51.55	Gibberellin-regulated protein 2 OS=Arabidopsis thaliana OX=3702 GN=GASA2 PE=2 SV...	[more]

BLAST of PI0000737 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3E7E4	2.0e-41	84.00	Gibberellin-regulated protein 11-like OS=Cucumis melo var. makuwa OX=1194695 GN=...	[more]
A0A1S3CSM7	2.0e-41	84.00	gibberellin-regulated protein 11-like OS=Cucumis melo OX=3656 GN=LOC103503872 PE...	[more]
A0A0A0LDK8	5.0e-40	80.39	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G872170 PE=3 SV=1	[more]
A0A6J1CCE1	1.0e-32	73.68	gibberellin-regulated protein 11-like OS=Momordica charantia OX=3673 GN=LOC11101...	[more]
A0A6J1FJ01	5.6e-31	72.45	gibberellin-regulated protein 1-like OS=Cucurbita moschata OX=3662 GN=LOC1114459...	[more]

BLAST of PI0000737 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008466478.1	4.2e-41	84.00	PREDICTED: gibberellin-regulated protein 11-like [Cucumis melo] >KAA0063284.1 gi...	[more]
XP_004136382.1	1.0e-39	80.39	gibberellin-regulated protein 11 [Cucumis sativus] >KGN60035.1 hypothetical prot...	[more]
XP_038899682.1	3.8e-34	75.00	gibberellin-regulated protein 1-like isoform X1 [Benincasa hispida]	[more]
XP_022139249.1	2.1e-32	73.68	gibberellin-regulated protein 11-like [Momordica charantia]	[more]
XP_031283220.1	6.1e-32	72.63	snakin-2 [Pistacia vera]	[more]

BLAST of PI0000737 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G75750.2	5.7e-28	59.00	GAST1 protein homolog 1	[more]
AT1G75750.1	7.4e-28	59.00	GAST1 protein homolog 1	[more]
AT2G18420.1	2.2e-27	58.00	Gibberellin-regulated family protein	[more]
AT4G09600.1	1.6e-22	70.49	GAST1 protein homolog 3	[more]
AT4G09610.1	1.8e-21	51.55	GAST1 protein homolog 2	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003854	Gibberellin regulated protein	PFAM	PF02704	GASA	coord: 41..100 e-value: 2.7E-21 score: 75.5
None	No IPR available	PANTHER	PTHR23201:SF67	SNAKIN-2-LIKE	coord: 6..100
None	No IPR available	PANTHER	PTHR23201	EXTENSIN, PROLINE-RICH PROTEIN	coord: 6..100

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0000737.1	PI0000737.1	mRNA