PI0000734 (gene) Melon (PI 482460) v1

Overview
NamePI0000734
Typegene
OrganismCucumis metuliferus (Melon (PI 482460) v1)
DescriptionUnknown protein
Locationchr04: 9354642 .. 9355353 (-)
RNA-Seq ExpressionPI0000734
SyntenyPI0000734
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATTGGTTTATATTTTGACAAGGTTTTATTTGCATATTTGTCTGTCTGAATTCAGTATTGTACATCTTACCATACTTTGACCTGTTTCTGTTGTTAAATACGGTTCTATAACATGGTGTCGATACAGATCAATATTCGCCTTCTACCCAATGATTTGGAATTGTGAGCTTTGAAGTTTGAAAAATTAAAGGACTTGGGCGTTGTGACACCTCTTGAATTTGTTTTATATTGTAGTCTGTCTTTGTTTTAATACTTAATGGGAAAGTTTGATGTATCTTAGATAAACGTGTTTGATAAAAGTAGGTGGTATGTGTGTGTACGTGTTTGATGAGATACGTTTATTAGTTTCCCCAAAATCTAACGTACTTTCCCCATAGATTTTATGTTGCTAAAAATTTCTATAGCTAAAAAAAGCTATTGATATATTCTTAATGTGCTGCCATTCTGTACGTTGTTGTAATGTAATGTAATAACTAAGGTATTTGGAGTTTGAAGAAGTTGCAGGTTTGTAGAAAAGGGTGAATCTCAATCTGGATGCATGGGAAAGTTCACGAGGCATCTAAAATCCATCGAGATCGAAGTCCAACCCACAGAAAACAGGTACATCACTCTTAAGCCCCGTGACTCTCCCATCCCTTTTTATTTTCTTCTCTTTCAGTGCCCTCTTGAAGTCAAAAAGGTTAAGCTTCACGGGTCTTTTTCCTCCCTAG

mRNA sequence

ATGATTGGTTTATATTTTGACAAGTCCAACCCACAGAAAACAGGTACATCACTCTTAAGCCCCGTGACTCTCCCATCCCTTTTTATTTTCTTCTCTTTCAGTGCCCTCTTGAAGTCAAAAAGGTTAAGCTTCACGGGTCTTTTTCCTCCCTAG

Coding sequence (CDS)

ATGATTGGTTTATATTTTGACAAGTCCAACCCACAGAAAACAGGTACATCACTCTTAAGCCCCGTGACTCTCCCATCCCTTTTTATTTTCTTCTCTTTCAGTGCCCTCTTGAAGTCAAAAAGGTTAAGCTTCACGGGTCTTTTTCCTCCCTAG

Protein sequence

MIGLYFDKSNPQKTGTSLLSPVTLPSLFIFFSFSALLKSKRLSFTGLFPP
Homology
[Close]
BLAST of PI0000734 vs. ExPASy TrEMBL
Match: A0A0A0LCZ8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G836470 PE=4 SV=1)

HSP 1 Score: 65.5 bits (158), Expect = 7.4e-08
Identity = 34/37 (91.89%), Postives = 34/37 (91.89%), Query Frame = 0 

Query: 14 TGTSLLSPVTLPSLFIFFSFSALLKSKRLSFTGLFPP 51
          TGTSLL PVTLPSL IFFSFSALLKSKRLSFT LFPP
Sbjct: 38 TGTSLLIPVTLPSLLIFFSFSALLKSKRLSFTDLFPP 74

[Close]
BLAST of PI0000734 vs. NCBI nr
Match: KGN59663.1 (hypothetical protein Csa_001457 [Cucumis sativus])

HSP 1 Score: 65.5 bits (158), Expect = 1.5e-07
Identity = 34/37 (91.89%), Postives = 34/37 (91.89%), Query Frame = 0 

Query: 14 TGTSLLSPVTLPSLFIFFSFSALLKSKRLSFTGLFPP 51
          TGTSLL PVTLPSL IFFSFSALLKSKRLSFT LFPP
Sbjct: 38 TGTSLLIPVTLPSLLIFFSFSALLKSKRLSFTDLFPP 74

The following BLAST results are available for this feature:
BLAST of PI0000734 vs.
Match NameE-valueIdentityDescription
BLAST of PI0000734 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LCZ87.4e-0891.89Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G836470 PE=4 SV=1[more]
BLAST of PI0000734 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN59663.11.5e-0791.89hypothetical protein Csa_001457 [Cucumis sativus][more]
BLAST of PI0000734 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
PI0000734.1PI0000734.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane