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PI0000664 (gene) Melon (PI 482460) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGACGAACGCTGATGTGATGGAGGACTACGATGAGGGTGATTCGACACACGCAACAACTGCAGGTGACGACATTCACTACATCGAAACGTTCAATGAATGGAGTCATTGGAGGGATGATCTGGCCCAAGAGATGGTCAGTGAATGGGAGTTACGTGATCAGTAGTACCTTTACAATCCTTGTTAACATTGGACACGTTAATGGTGTTTCGAAACGTCTTAATTTATTTTTTGTAAACGCATGTGTACATTTATGACATCAATTAACAGTTGACAAATCAATGTAAAGGACAACTTCCCATGTTGCACACTTTTTTGTTTTCTTTTACTTACTACAATATTTACTTTTCTTATCTTCAATAGTATGGCAAGTTCCTCCTAGGCCCCCAAACACATCTGGACGAAGGAGGAAGAGGCATACCTGGTCGAGGCCTTGGTAGAGTTGGTATCCGCCGACGGTTGGAAGTCAAACAACGGTACCTTTCGTCCTGGGTACTTAGCGCAGCTACAGAGAATGATGGCAGAGAAGATGCCTGGATGTAATATCCAAGGTTTGCCGACAATTGACTGTCGGATAAAAAACATGAAGAAAACATTCCAGACCATTGCAGAGATGTGCGGGCCGTCGTGTAGTAAGTTTGGTTGGAACGATGAAGTGAAGTGCATCATCGCTGAGAGAGAGTTGTTCGACAGTTGGGTTAAGGTAAGTTATTCATTATGAAAATACGATGTTCGTTTATACTAAAAAAAAAACTGACAATTTATTTAAAAATGTGAATAGAGTCATTCTGTTGCGAAGGGCCTCCTAAACAAGCCATTTCCCCATTACGACGACCTGTGCTACGCCTTTGGGAAGGATCGTGCGACGGGAGCTCGTGCAGAGACATTCACCAACGTCGGGTCGAATGTGCCTGGAAGGTTCGAAGGATTTTTCGCTGATTATGGAAACGATACGAAGATCCTTATGATATACGGTCAGGGACTAGACATGTCGCTTGATGACATGGCGAGTGCAGGTCTCGGTCGCTCGATGAAGGGTAGGACTGGTTCAAGCGAATCGAAGAGGAAGCGAGGAGACCAGGCAACACAGACTATGGAGATCATTCAGAATGCAATGGACTTCGCCAACGACCAGTTGAAGGCTATTGCAGAGTGGCCGAATTTACAACGTCAAGAAGAAGGCGTCGTTCGTGACGAAGTCGTTAACCAACTCAGGGCATCCCCGAACTAA ATGACGAACGCTGATGTGATGGAGGACTACGATGAGGGTGATTCGACACACGCAACAACTGCAGGTGACGACATTCACTACATCGAAACGTTCAATGAATGGAGTCATTGGAGGGATGATCTGGCCCAAGAGATGGCCCCCAAACACATCTGGACGAAGGAGGAAGAGGCATACCTGGTCGAGGCCTTGGTAGAGTTGGTATCCGCCGACGGTTGGAAGTCAAACAACGGTACCTTTCGTCCTGGGTACTTAGCGCAGCTACAGAGAATGATGGCAGAGAAGATGCCTGGATGTAATATCCAAGGTTTGCCGACAATTGACTGTCGGATAAAAAACATGAAGAAAACATTCCAGACCATTGCAGAGATGTGCGGGCCGTCGTGTAGTAAGTTTGGTTGGAACGATGAAGTGAAGTGCATCATCGCTGAGAGAGAGTTGTTCGACAGTTGGGTTAAGAGTCATTCTGTTGCGAAGGGCCTCCTAAACAAGCCATTTCCCCATTACGACGACCTGTGCTACGCCTTTGGGAAGGATCGTGCGACGGGAGCTCGTGCAGAGACATTCACCAACGTCGGGTCGAATGTGCCTGGAAGGTTCGAAGGATTTTTCGCTGATTATGGAAACGATACGAAGATCCTTATGATATACGGTCAGGGACTAGACATGTCGCTTGATGACATGGCGAGTGCAGGTCTCGGTCGCTCGATGAAGGGTAGGACTGGTTCAAGCGAATCGAAGAGGAAGCGAGGAGACCAGGCAACACAGACTATGGAGATCATTCAGAATGCAATGGACTTCGCCAACGACCAGTTGAAGGCTATTGCAGAGTGGCCGAATTTACAACGTCAAGAAGAAGGCGTCGTTCGTGACGAAGTCGTTAACCAACTCAGGGCATCCCCGAACTAA ATGACGAACGCTGATGTGATGGAGGACTACGATGAGGGTGATTCGACACACGCAACAACTGCAGGTGACGACATTCACTACATCGAAACGTTCAATGAATGGAGTCATTGGAGGGATGATCTGGCCCAAGAGATGGCCCCCAAACACATCTGGACGAAGGAGGAAGAGGCATACCTGGTCGAGGCCTTGGTAGAGTTGGTATCCGCCGACGGTTGGAAGTCAAACAACGGTACCTTTCGTCCTGGGTACTTAGCGCAGCTACAGAGAATGATGGCAGAGAAGATGCCTGGATGTAATATCCAAGGTTTGCCGACAATTGACTGTCGGATAAAAAACATGAAGAAAACATTCCAGACCATTGCAGAGATGTGCGGGCCGTCGTGTAGTAAGTTTGGTTGGAACGATGAAGTGAAGTGCATCATCGCTGAGAGAGAGTTGTTCGACAGTTGGGTTAAGAGTCATTCTGTTGCGAAGGGCCTCCTAAACAAGCCATTTCCCCATTACGACGACCTGTGCTACGCCTTTGGGAAGGATCGTGCGACGGGAGCTCGTGCAGAGACATTCACCAACGTCGGGTCGAATGTGCCTGGAAGGTTCGAAGGATTTTTCGCTGATTATGGAAACGATACGAAGATCCTTATGATATACGGTCAGGGACTAGACATGTCGCTTGATGACATGGCGAGTGCAGGTCTCGGTCGCTCGATGAAGGGTAGGACTGGTTCAAGCGAATCGAAGAGGAAGCGAGGAGACCAGGCAACACAGACTATGGAGATCATTCAGAATGCAATGGACTTCGCCAACGACCAGTTGAAGGCTATTGCAGAGTGGCCGAATTTACAACGTCAAGAAGAAGGCGTCGTTCGTGACGAAGTCGTTAACCAACTCAGGGCATCCCCGAACTAA MTNADVMEDYDEGDSTHATTAGDDIHYIETFNEWSHWRDDLAQEMAPKHIWTKEEEAYLVEALVELVSADGWKSNNGTFRPGYLAQLQRMMAEKMPGCNIQGLPTIDCRIKNMKKTFQTIAEMCGPSCSKFGWNDEVKCIIAERELFDSWVKSHSVAKGLLNKPFPHYDDLCYAFGKDRATGARAETFTNVGSNVPGRFEGFFADYGNDTKILMIYGQGLDMSLDDMASAGLGRSMKGRTGSSESKRKRGDQATQTMEIIQNAMDFANDQLKAIAEWPNLQRQEEGVVRDEVVNQLRASPN Homology
BLAST of PI0000664 vs. ExPASy TrEMBL
Match: A0A5A7T091 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold9475G00160 PE=4 SV=1) HSP 1 Score: 353.2 bits (905), Expect = 1.1e-93 Identity = 180/313 (57.51%), Postives = 220/313 (70.29%), Query Frame = 0
BLAST of PI0000664 vs. ExPASy TrEMBL
Match: E5GCB5 (Retrotransposon protein OS=Cucumis melo subsp. melo OX=412675 PE=3 SV=1) HSP 1 Score: 346.7 bits (888), Expect = 1.0e-91 Identity = 178/306 (58.17%), Postives = 214/306 (69.93%), Query Frame = 0
BLAST of PI0000664 vs. ExPASy TrEMBL
Match: A0A5A7SXX8 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold862G00320 PE=3 SV=1) HSP 1 Score: 315.1 bits (806), Expect = 3.2e-82 Identity = 161/308 (52.27%), Postives = 199/308 (64.61%), Query Frame = 0
BLAST of PI0000664 vs. ExPASy TrEMBL
Match: A0A5A7U0H7 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold648G002060 PE=4 SV=1) HSP 1 Score: 315.1 bits (806), Expect = 3.2e-82 Identity = 154/256 (60.16%), Postives = 190/256 (74.22%), Query Frame = 0
BLAST of PI0000664 vs. ExPASy TrEMBL
Match: A0A1S3B4L3 (uncharacterized protein LOC103485953 OS=Cucumis melo OX=3656 GN=LOC103485953 PE=4 SV=1) HSP 1 Score: 315.1 bits (806), Expect = 3.2e-82 Identity = 154/256 (60.16%), Postives = 190/256 (74.22%), Query Frame = 0
BLAST of PI0000664 vs. NCBI nr
Match: KAA0036924.1 (retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 353.2 bits (905), Expect = 2.2e-93 Identity = 180/313 (57.51%), Postives = 220/313 (70.29%), Query Frame = 0
BLAST of PI0000664 vs. NCBI nr
Match: ADN34114.1 (retrotransposon protein [Cucumis melo subsp. melo]) HSP 1 Score: 346.7 bits (888), Expect = 2.1e-91 Identity = 178/306 (58.17%), Postives = 214/306 (69.93%), Query Frame = 0
BLAST of PI0000664 vs. NCBI nr
Match: KAA0035413.1 (retrotransposon protein [Cucumis melo var. makuwa] >TYK25738.1 retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 315.1 bits (806), Expect = 6.6e-82 Identity = 161/308 (52.27%), Postives = 199/308 (64.61%), Query Frame = 0
BLAST of PI0000664 vs. NCBI nr
Match: XP_008441954.1 (PREDICTED: uncharacterized protein LOC103485953 [Cucumis melo] >KAA0047736.1 retrotransposon protein [Cucumis melo var. makuwa] >TYK08388.1 retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 315.1 bits (806), Expect = 6.6e-82 Identity = 154/256 (60.16%), Postives = 190/256 (74.22%), Query Frame = 0
BLAST of PI0000664 vs. NCBI nr
Match: ADN33754.1 (retrotransposon protein [Cucumis melo subsp. melo]) HSP 1 Score: 313.5 bits (802), Expect = 1.9e-81 Identity = 164/302 (54.30%), Postives = 204/302 (67.55%), Query Frame = 0
BLAST of PI0000664 vs. TAIR 10
Match: AT1G30140.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G27260.1); Has 313 Blast hits to 256 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 8; Plants - 295; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). ) HSP 1 Score: 59.7 bits (143), Expect = 4.7e-09 Identity = 41/145 (28.28%), Postives = 71/145 (48.97%), Query Frame = 0
BLAST of PI0000664 vs. TAIR 10
Match: AT2G24960.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G02210.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 48.5 bits (114), Expect = 1.1e-05 Identity = 32/136 (23.53%), Postives = 64/136 (47.06%), Query Frame = 0
BLAST of PI0000664 vs. TAIR 10
Match: AT4G02210.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G24960.2); Has 791 Blast hits to 465 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 17; Plants - 748; Viruses - 0; Other Eukaryotes - 26 (source: NCBI BLink). ) HSP 1 Score: 47.8 bits (112), Expect = 1.8e-05 Identity = 18/68 (26.47%), Postives = 37/68 (54.41%), Query Frame = 0
BLAST of PI0000664 vs. TAIR 10
Match: AT4G02210.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G24960.2). ) HSP 1 Score: 47.8 bits (112), Expect = 1.8e-05 Identity = 18/68 (26.47%), Postives = 37/68 (54.41%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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