PI0000491 (gene) Melon (PI 482460) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGACATGAATGGGGTCGTTGAAAACATAACAAATATCTATACTATGAAGCACCTGCAAAGGTATCAGACCCACAAGAGTACTAACAAGAACCAAAGAATCAAGAGGAGCCAGAGCAACATAGAGTTCAAAGTCGACGGCAACATCCAGCTGGAAATCGATGACGTCTGA ATGGACATGAATGGGGTCGTTGAAAACATAACAAATATCTATACTATGAAGCACCTGCAAAGGTATCAGACCCACAAGAGTACTAACAAGAACCAAAGAATCAAGAGGAGCCAGAGCAACATAGAGTTCAAAGTCGACGGCAACATCCAGCTGGAAATCGATGACGTCTGA ATGGACATGAATGGGGTCGTTGAAAACATAACAAATATCTATACTATGAAGCACCTGCAAAGGTATCAGACCCACAAGAGTACTAACAAGAACCAAAGAATCAAGAGGAGCCAGAGCAACATAGAGTTCAAAGTCGACGGCAACATCCAGCTGGAAATCGATGACGTCTGA MDMNGVVENITNIYTMKHLQRYQTHKSTNKNQRIKRSQSNIEFKVDGNIQLEIDDV Homology
BLAST of PI0000491 vs. ExPASy TrEMBL
Match: A0A5A7VF64 (Mediator of RNA polymerase II transcription subunit 12-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold384G00200 PE=4 SV=1) HSP 1 Score: 71.6 bits (174), Expect = 1.2e-09 Identity = 38/56 (67.86%), Postives = 45/56 (80.36%), Query Frame = 0
BLAST of PI0000491 vs. ExPASy TrEMBL
Match: A0A5D3C2V9 (Mediator of RNA polymerase II transcription subunit 12-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold98G001060 PE=4 SV=1) HSP 1 Score: 66.6 bits (161), Expect = 3.7e-08 Identity = 36/56 (64.29%), Postives = 42/56 (75.00%), Query Frame = 0
BLAST of PI0000491 vs. ExPASy TrEMBL
Match: A0A5A7TDY5 (Serine/threonine-protein phosphatase 7 long form-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold128G00990 PE=4 SV=1) HSP 1 Score: 61.6 bits (148), Expect = 1.2e-06 Identity = 32/48 (66.67%), Postives = 40/48 (83.33%), Query Frame = 0
BLAST of PI0000491 vs. ExPASy TrEMBL
Match: A0A5A7TI03 (Stress-response A/B barrel domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold708G00480 PE=4 SV=1) HSP 1 Score: 52.8 bits (125), Expect = 5.5e-04 Identity = 27/36 (75.00%), Postives = 31/36 (86.11%), Query Frame = 0
BLAST of PI0000491 vs. NCBI nr
Match: KAA0066693.1 (mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa] >TYK27843.1 mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa]) HSP 1 Score: 71.6 bits (174), Expect = 2.4e-09 Identity = 38/56 (67.86%), Postives = 45/56 (80.36%), Query Frame = 0
BLAST of PI0000491 vs. NCBI nr
Match: KAA0040602.1 (mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa] >TYK05644.1 mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa]) HSP 1 Score: 66.6 bits (161), Expect = 7.6e-08 Identity = 36/56 (64.29%), Postives = 42/56 (75.00%), Query Frame = 0
BLAST of PI0000491 vs. NCBI nr
Match: KAA0041168.1 (serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var. makuwa]) HSP 1 Score: 61.6 bits (148), Expect = 2.5e-06 Identity = 32/48 (66.67%), Postives = 40/48 (83.33%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|