PI0000470 (gene) Melon (PI 482460) v1

Overview
NamePI0000470
Typegene
OrganismCucumis metuliferus (Melon (PI 482460) v1)
DescriptionTy3-gypsy retrotransposon protein
Locationchr09: 6046278 .. 6048345 (-)
RNA-Seq ExpressionPI0000470
SyntenyPI0000470
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACATCCAGAGGCAACACTTCCAAAGCTCTAAGCAACATCGGAAAAAGGCCAAATACTCGCAACCGCTCAAGGGAGGCCCAATCATCTGAGGATATGCCACCCTTTGAGGTCGCAAAGAGTATCAGGGAAGAGTTGTCAAAACCACCAAAAGGTGGAATTATAATAAAGGAAAATCCTGTGATTGATGAGCACGGTTCGTCTTCTGAACACTCAAGTGAGGAGATGCCTCACCCAAATATAATGTCGGTTATGGTGACTGATGTTGATACAAGTGAAGATAGAATGACGGAGCTTGAAAAGAAGGTTAACATGCTCCTGAAGGCAGTTGAAGAAAGGAATTATGAGATTGCATCCCTGAGAAATCACATTGAAAGTCATGACGCTGCTGAATCAAGGCACACATATACCACCAAGAATAAGGACAAAGGGAAGACAATTTTGCAGGAAAGTCAACCACAAAATTCGACCTCAATTGCATCGTTGTCTGTTCAACAGTTGCAAGATATGATAGCCAACTCCATCCAGATTCAATATGGTGGAACTGCTCAAACTTTCTCTTCGTATTCCAAGCCATATACGAAAAGGATCGACAATCTGAAAATGCCAATTGGTTACCAGCCACCTAAGTTCCAACAATTTGATGGAAAAGGCAATCCAAAGCAACATGTTGCTCACTTTATCGAAACATGTGAAACTGCTGGTGCACGAGAAGATTTGTTGGTTAGACAGTTCGTCCGAACTCTCAAGGGAAATGCCTTCGACTGGTACACCGATCTTGAGCCTAAAACCATTGATAGTTGGGAGCAGTTTGAGAGGGAATTTCTCAACCGCTTCTACAACACTCGACGTATCGTTAGCATGATAGAGCTAACAACCACCAAGCAGCGAAAGGGCGAGTCAGTCATTGACTACATTAATCGCTAGAGAGCATTAAGCCTTGACTGCAAAGACAGATTAACTGAACTGTCAGTAGTGGAAATGTGCACTCAAGGAATGCATTGGAGGCTCCTATACATCTTGCAGGGAATAAAACCCCGCACCTTTGAAGAGTTAGCAACTAGAACTCATGATATGGAGTTAAGTATTGCTAATAGAGGAAACAATGACCTGTTGATCCCAGAAGTGAGAAAGGAAAAGAAAGAAATGAAGAGCACCCTGAAGGTATCAAAGGGTGCTACCAAAGAAGCTTTGGTCGTTACTACGACCCATTTAAAGTTTGTTCCTAAAGAGAAGAAGATGGAAAAATGCCAAGATGAAGGCGAAAAAAGACGCCCAACATTGAAAGAGAGGCAAGAAAAAGTTTACCCTTTTCTAGACTCTGACTTACCTGATATATTAGAGCAATTACTGGAAAAACAACTCATTCAACTTCCTGAATGTAAACGACCAACAGAAATTGGGAAGGTAAATGATCCTAATTACTGCAAATATCATCGAGTCATCAGCCACCCTGTAGAGAAATGCTTCGTGTTAAAAGAGTTAATTTTGAAATTAGCTCTAGACAAAAAAATTGAACTTGATCTCGATGATGTGGCACAAACGAATCATGTTGCAGTAATGAGTCATGTAGAGGGTCGATCACTTGCTACAGGTAGTCTAATTCAATTTGGATCTTTGAAAGCCTGTTGTTATATATTCTTCACCGGAGGTCTTACAGAAAAATGACATTTGAACTGTTCACTCAAAAGAAGAAGAAAAGCATGTGGAGGATGCTGATGAGGGATGGACGCTAGTCACGCGTCGAAAAAAGCACAAACAAAATTTTTCTAAAAAAGAATCCCGCTTGTACCGAGAGTATAAAAGAAAGGGCAAGTCTCAGAGAAGAAAAGCAAGGAAGAATGCAAGGAAGTTTCAACCAATCACCAAAGAAGGTGAGGAGCTTCCTCGACCACGACAACCAATAACTTTGAAAGACTTTTTCCCTGAAAACTTCCATTGGAAATCGTTTCGTGCCATGCTGTCAGTACAATTGAAGATGGCACTTCTCCCTCAAATTCCGCAGAAGTCAGTACAACTGGGGATGACACTTCTCCCTCAAAGTCTGCAGAAGCAACAACCAAGCTAG

mRNA sequence

ATGACATCCAGAGGCAACACTTCCAAAGCTCTAAGCAACATCGGAAAAAGGCCAAATACTCGCAACCGCTCAAGGGAGGCCCAATCATCTGAGGATATGCCACCCTTTGAGGTCGCAAAGAGTATCAGGGAAGAGTTGTCAAAACCACCAAAAGGTGGAATTATAATAAAGGAAAATCCTGTGATTGATGAGCACGGTTCGTCTTCTGAACACTCAAGTGAGGAGATGCCTCACCCAAATATAATGTCGGTTATGGTGACTGATGTTGATACAAGTGAAGATAGAATGACGGAGCTTGAAAAGAAGGTTAACATGCTCCTGAAGGCAGTTGAAGAAAGGAATTATGAGATTGCATCCCTGAGAAATCACATTGAAAGTCATGACGCTGCTGAATCAAGGCACACATATACCACCAAGAATAAGGACAAAGGGAAGACAATTTTGCAGGAAAAAGAAGAAAAGCATGTGGAGGATGCTGATGAGGGATGGACGCTAGTCACGCGTCGAAAAAAGCACAAACAAAATTTTTCTAAAAAAGAATCCCGCTTGTACCGAGAGTATAAAAGAAAGGGCAAGTCTCAGAGAAGAAAAGCAAGGAAGAATGCAAGGAAGTTTCAACCAATCACCAAAGAAGGTGAGGAGCTTCCTCGACCACGACAACCAATAACTTTGAAAGACTTTTTCCCTGAAAACTTCCATTGGAAATCGTTTCGTGCCATGCTGTCAGTACAATTGAAGATGGCACTTCTCCCTCAAATTCCGCAGAAGTCAGTACAACTGGGGATGACACTTCTCCCTCAAAGTCTGCAGAAGCAACAACCAAGCTAG

Coding sequence (CDS)

ATGACATCCAGAGGCAACACTTCCAAAGCTCTAAGCAACATCGGAAAAAGGCCAAATACTCGCAACCGCTCAAGGGAGGCCCAATCATCTGAGGATATGCCACCCTTTGAGGTCGCAAAGAGTATCAGGGAAGAGTTGTCAAAACCACCAAAAGGTGGAATTATAATAAAGGAAAATCCTGTGATTGATGAGCACGGTTCGTCTTCTGAACACTCAAGTGAGGAGATGCCTCACCCAAATATAATGTCGGTTATGGTGACTGATGTTGATACAAGTGAAGATAGAATGACGGAGCTTGAAAAGAAGGTTAACATGCTCCTGAAGGCAGTTGAAGAAAGGAATTATGAGATTGCATCCCTGAGAAATCACATTGAAAGTCATGACGCTGCTGAATCAAGGCACACATATACCACCAAGAATAAGGACAAAGGGAAGACAATTTTGCAGGAAAAAGAAGAAAAGCATGTGGAGGATGCTGATGAGGGATGGACGCTAGTCACGCGTCGAAAAAAGCACAAACAAAATTTTTCTAAAAAAGAATCCCGCTTGTACCGAGAGTATAAAAGAAAGGGCAAGTCTCAGAGAAGAAAAGCAAGGAAGAATGCAAGGAAGTTTCAACCAATCACCAAAGAAGGTGAGGAGCTTCCTCGACCACGACAACCAATAACTTTGAAAGACTTTTTCCCTGAAAACTTCCATTGGAAATCGTTTCGTGCCATGCTGTCAGTACAATTGAAGATGGCACTTCTCCCTCAAATTCCGCAGAAGTCAGTACAACTGGGGATGACACTTCTCCCTCAAAGTCTGCAGAAGCAACAACCAAGCTAG

Protein sequence

MTSRGNTSKALSNIGKRPNTRNRSREAQSSEDMPPFEVAKSIREELSKPPKGGIIIKENPVIDEHGSSSEHSSEEMPHPNIMSVMVTDVDTSEDRMTELEKKVNMLLKAVEERNYEIASLRNHIESHDAAESRHTYTTKNKDKGKTILQEKEEKHVEDADEGWTLVTRRKKHKQNFSKKESRLYREYKRKGKSQRRKARKNARKFQPITKEGEELPRPRQPITLKDFFPENFHWKSFRAMLSVQLKMALLPQIPQKSVQLGMTLLPQSLQKQQPS
Homology
BLAST of PI0000470 vs. ExPASy TrEMBL
Match: A0A5D3C857 (Ty3-gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold202G00540 PE=4 SV=1)

HSP 1 Score: 233.0 bits (593), Expect = 1.5e-57
Identity = 123/152 (80.92%), Postives = 138/152 (90.79%), Query Frame = 0

Query: 1   MTSRGNTSKALSNIGKRPNTRNRSREAQSSEDMPPFEVAKSIREELSKPPKGGIIIKENP 60
           MTS+GNTSKALS+IGKRPNTR+RSR+ QS ED P FEVAK+I E++SKPPKGGI+IKENP
Sbjct: 1   MTSQGNTSKALSDIGKRPNTRSRSRKIQSCEDTPHFEVAKNIWEQISKPPKGGIVIKENP 60

Query: 61  VIDEHGSSSEHSSEEMPHPNIMSVMVTDVDTSEDRMTELEKKVNMLLKAVEERNYEIASL 120
            IDEH SS EHSSEEMPH NIMSVMVTDVDTSE+RM ELEKKVNML+KAVEER+YEIASL
Sbjct: 61  TIDEHNSSFEHSSEEMPHLNIMSVMVTDVDTSENRMAELEKKVNMLMKAVEERDYEIASL 120

Query: 121 RNHIESHDAAESRHTYTTKNKDKGKTILQEKE 153
           +NHIESHDAAES HT+T KN DKGKTI+QE +
Sbjct: 121 KNHIESHDAAESSHTHTIKNVDKGKTIIQESQ 152

BLAST of PI0000470 vs. ExPASy TrEMBL
Match: A0A5D3BRH6 (Ty3-gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold18G00640 PE=4 SV=1)

HSP 1 Score: 229.6 bits (584), Expect = 1.6e-56
Identity = 119/155 (76.77%), Postives = 141/155 (90.97%), Query Frame = 0

Query: 1   MTSRGNTSKALSNIGKRPNTRNRSREAQSSEDMPPFEVAKSIREELSKPPKGGIIIKENP 60
           MTS+GNTSKALS+IGKRPNTR+RSRE QSSEDMPPFEVAK+I E++SKPPKGGI+IKENP
Sbjct: 1   MTSQGNTSKALSDIGKRPNTRSRSREIQSSEDMPPFEVAKNIWEQISKPPKGGIVIKENP 60

Query: 61  VIDEHGSSSEHSSEEMPHPNIMSVMVTDVDTSEDRMTELEKKVNMLLKAVEERNYEIASL 120
            IDEH S SE S+EE+P PNIMS+MVTDVDTSEDRMT+LEKKVNML+KAVEER++EIA L
Sbjct: 61  AIDEHNSLSERSNEEVPQPNIMSIMVTDVDTSEDRMTDLEKKVNMLMKAVEERDFEIALL 120

Query: 121 RNHIESHDAAESRHTYTTKNKDKGKTILQEKEEKH 156
           +NHIESHDAAES H++T KN +KGK I+QE + ++
Sbjct: 121 KNHIESHDAAESSHSHTIKNVNKGKAIMQESQPQN 155

BLAST of PI0000470 vs. ExPASy TrEMBL
Match: A0A5A7UZD5 (Ty3-gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold22G004860 PE=4 SV=1)

HSP 1 Score: 229.6 bits (584), Expect = 1.6e-56
Identity = 119/155 (76.77%), Postives = 141/155 (90.97%), Query Frame = 0

Query: 1   MTSRGNTSKALSNIGKRPNTRNRSREAQSSEDMPPFEVAKSIREELSKPPKGGIIIKENP 60
           MTS+GNTSKALS+IGKRPNTR+RSRE QSSEDMPPFEVAK+I E++SKPPKGGI+IKENP
Sbjct: 1   MTSQGNTSKALSDIGKRPNTRSRSREIQSSEDMPPFEVAKNIWEQISKPPKGGIVIKENP 60

Query: 61  VIDEHGSSSEHSSEEMPHPNIMSVMVTDVDTSEDRMTELEKKVNMLLKAVEERNYEIASL 120
            IDEH S SE S+EE+P PNIMS+MVTDVDTSEDRMT+LEKKVNML+KAVEER++EIA L
Sbjct: 61  AIDEHNSLSERSNEEVPQPNIMSIMVTDVDTSEDRMTDLEKKVNMLMKAVEERDFEIALL 120

Query: 121 RNHIESHDAAESRHTYTTKNKDKGKTILQEKEEKH 156
           +NHIESHDAAES H++T KN +KGK I+QE + ++
Sbjct: 121 KNHIESHDAAESSHSHTIKNVNKGKAIMQESQPQN 155

BLAST of PI0000470 vs. ExPASy TrEMBL
Match: A0A5A7T5T3 (Ty3-gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1244G00140 PE=4 SV=1)

HSP 1 Score: 227.3 bits (578), Expect = 8.1e-56
Identity = 120/152 (78.95%), Postives = 136/152 (89.47%), Query Frame = 0

Query: 1   MTSRGNTSKALSNIGKRPNTRNRSREAQSSEDMPPFEVAKSIREELSKPPKGGIIIKENP 60
           MTS+GNTSKALS+IGKRPNTR+RSR+ QS ED P FEVAK+I E++SKPPKGGI+IKENP
Sbjct: 1   MTSQGNTSKALSDIGKRPNTRSRSRKIQSCEDTPHFEVAKNIWEQISKPPKGGIVIKENP 60

Query: 61  VIDEHGSSSEHSSEEMPHPNIMSVMVTDVDTSEDRMTELEKKVNMLLKAVEERNYEIASL 120
            IDEH SS EHS EEMPH NIMSVMVTDVDTSE+RM ELEKKVNML+KAVEER+YEIASL
Sbjct: 61  TIDEHNSSFEHSIEEMPHLNIMSVMVTDVDTSENRMAELEKKVNMLMKAVEERDYEIASL 120

Query: 121 RNHIESHDAAESRHTYTTKNKDKGKTILQEKE 153
           +NHIESHDAAES HT+T KN +KGK I+QE +
Sbjct: 121 KNHIESHDAAESSHTHTIKNANKGKAIIQESQ 152

BLAST of PI0000470 vs. ExPASy TrEMBL
Match: A0A5A7TZU9 (Ribonuclease H OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold498G00940 PE=4 SV=1)

HSP 1 Score: 225.7 bits (574), Expect = 2.3e-55
Identity = 118/155 (76.13%), Postives = 139/155 (89.68%), Query Frame = 0

Query: 1   MTSRGNTSKALSNIGKRPNTRNRSREAQSSEDMPPFEVAKSIREELSKPPKGGIIIKENP 60
           MTS+GNTSKALS+IGKRPNTR+RSRE QSSEDMPPF+VAK+I E++SKPPKGGI+IKENP
Sbjct: 1   MTSQGNTSKALSDIGKRPNTRSRSREIQSSEDMPPFDVAKNIWEQISKPPKGGIVIKENP 60

Query: 61  VIDEHGSSSEHSSEEMPHPNIMSVMVTDVDTSEDRMTELEKKVNMLLKAVEERNYEIASL 120
            +DEH S SE S+EE+P PNIMSVMVTDVDTSEDRM ELEKKVNML+KAVEER++EIA L
Sbjct: 61  AMDEHNSLSERSNEEVPQPNIMSVMVTDVDTSEDRMAELEKKVNMLMKAVEERDFEIALL 120

Query: 121 RNHIESHDAAESRHTYTTKNKDKGKTILQEKEEKH 156
           +NHIES DAAES HT+T KN +KGK I+QE + ++
Sbjct: 121 KNHIESRDAAESSHTHTIKNANKGKAIMQESQPQN 155

BLAST of PI0000470 vs. NCBI nr
Match: TYK07338.1 (ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 233.0 bits (593), Expect = 3.0e-57
Identity = 123/152 (80.92%), Postives = 138/152 (90.79%), Query Frame = 0

Query: 1   MTSRGNTSKALSNIGKRPNTRNRSREAQSSEDMPPFEVAKSIREELSKPPKGGIIIKENP 60
           MTS+GNTSKALS+IGKRPNTR+RSR+ QS ED P FEVAK+I E++SKPPKGGI+IKENP
Sbjct: 1   MTSQGNTSKALSDIGKRPNTRSRSRKIQSCEDTPHFEVAKNIWEQISKPPKGGIVIKENP 60

Query: 61  VIDEHGSSSEHSSEEMPHPNIMSVMVTDVDTSEDRMTELEKKVNMLLKAVEERNYEIASL 120
            IDEH SS EHSSEEMPH NIMSVMVTDVDTSE+RM ELEKKVNML+KAVEER+YEIASL
Sbjct: 61  TIDEHNSSFEHSSEEMPHLNIMSVMVTDVDTSENRMAELEKKVNMLMKAVEERDYEIASL 120

Query: 121 RNHIESHDAAESRHTYTTKNKDKGKTILQEKE 153
           +NHIESHDAAES HT+T KN DKGKTI+QE +
Sbjct: 121 KNHIESHDAAESSHTHTIKNVDKGKTIIQESQ 152

BLAST of PI0000470 vs. NCBI nr
Match: TYK02263.1 (ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 229.6 bits (584), Expect = 3.4e-56
Identity = 119/155 (76.77%), Postives = 141/155 (90.97%), Query Frame = 0

Query: 1   MTSRGNTSKALSNIGKRPNTRNRSREAQSSEDMPPFEVAKSIREELSKPPKGGIIIKENP 60
           MTS+GNTSKALS+IGKRPNTR+RSRE QSSEDMPPFEVAK+I E++SKPPKGGI+IKENP
Sbjct: 1   MTSQGNTSKALSDIGKRPNTRSRSREIQSSEDMPPFEVAKNIWEQISKPPKGGIVIKENP 60

Query: 61  VIDEHGSSSEHSSEEMPHPNIMSVMVTDVDTSEDRMTELEKKVNMLLKAVEERNYEIASL 120
            IDEH S SE S+EE+P PNIMS+MVTDVDTSEDRMT+LEKKVNML+KAVEER++EIA L
Sbjct: 61  AIDEHNSLSERSNEEVPQPNIMSIMVTDVDTSEDRMTDLEKKVNMLMKAVEERDFEIALL 120

Query: 121 RNHIESHDAAESRHTYTTKNKDKGKTILQEKEEKH 156
           +NHIESHDAAES H++T KN +KGK I+QE + ++
Sbjct: 121 KNHIESHDAAESSHSHTIKNVNKGKAIMQESQPQN 155

BLAST of PI0000470 vs. NCBI nr
Match: KAA0060608.1 (ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 229.6 bits (584), Expect = 3.4e-56
Identity = 119/155 (76.77%), Postives = 141/155 (90.97%), Query Frame = 0

Query: 1   MTSRGNTSKALSNIGKRPNTRNRSREAQSSEDMPPFEVAKSIREELSKPPKGGIIIKENP 60
           MTS+GNTSKALS+IGKRPNTR+RSRE QSSEDMPPFEVAK+I E++SKPPKGGI+IKENP
Sbjct: 1   MTSQGNTSKALSDIGKRPNTRSRSREIQSSEDMPPFEVAKNIWEQISKPPKGGIVIKENP 60

Query: 61  VIDEHGSSSEHSSEEMPHPNIMSVMVTDVDTSEDRMTELEKKVNMLLKAVEERNYEIASL 120
            IDEH S SE S+EE+P PNIMS+MVTDVDTSEDRMT+LEKKVNML+KAVEER++EIA L
Sbjct: 61  AIDEHNSLSERSNEEVPQPNIMSIMVTDVDTSEDRMTDLEKKVNMLMKAVEERDFEIALL 120

Query: 121 RNHIESHDAAESRHTYTTKNKDKGKTILQEKEEKH 156
           +NHIESHDAAES H++T KN +KGK I+QE + ++
Sbjct: 121 KNHIESHDAAESSHSHTIKNVNKGKAIMQESQPQN 155

BLAST of PI0000470 vs. NCBI nr
Match: KAA0036729.1 (ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 227.3 bits (578), Expect = 1.7e-55
Identity = 120/152 (78.95%), Postives = 136/152 (89.47%), Query Frame = 0

Query: 1   MTSRGNTSKALSNIGKRPNTRNRSREAQSSEDMPPFEVAKSIREELSKPPKGGIIIKENP 60
           MTS+GNTSKALS+IGKRPNTR+RSR+ QS ED P FEVAK+I E++SKPPKGGI+IKENP
Sbjct: 1   MTSQGNTSKALSDIGKRPNTRSRSRKIQSCEDTPHFEVAKNIWEQISKPPKGGIVIKENP 60

Query: 61  VIDEHGSSSEHSSEEMPHPNIMSVMVTDVDTSEDRMTELEKKVNMLLKAVEERNYEIASL 120
            IDEH SS EHS EEMPH NIMSVMVTDVDTSE+RM ELEKKVNML+KAVEER+YEIASL
Sbjct: 61  TIDEHNSSFEHSIEEMPHLNIMSVMVTDVDTSENRMAELEKKVNMLMKAVEERDYEIASL 120

Query: 121 RNHIESHDAAESRHTYTTKNKDKGKTILQEKE 153
           +NHIESHDAAES HT+T KN +KGK I+QE +
Sbjct: 121 KNHIESHDAAESSHTHTIKNANKGKAIIQESQ 152

BLAST of PI0000470 vs. NCBI nr
Match: KAA0047477.1 (uncharacterized protein E6C27_scaffold498G00940 [Cucumis melo var. makuwa])

HSP 1 Score: 225.7 bits (574), Expect = 4.8e-55
Identity = 118/155 (76.13%), Postives = 139/155 (89.68%), Query Frame = 0

Query: 1   MTSRGNTSKALSNIGKRPNTRNRSREAQSSEDMPPFEVAKSIREELSKPPKGGIIIKENP 60
           MTS+GNTSKALS+IGKRPNTR+RSRE QSSEDMPPF+VAK+I E++SKPPKGGI+IKENP
Sbjct: 1   MTSQGNTSKALSDIGKRPNTRSRSREIQSSEDMPPFDVAKNIWEQISKPPKGGIVIKENP 60

Query: 61  VIDEHGSSSEHSSEEMPHPNIMSVMVTDVDTSEDRMTELEKKVNMLLKAVEERNYEIASL 120
            +DEH S SE S+EE+P PNIMSVMVTDVDTSEDRM ELEKKVNML+KAVEER++EIA L
Sbjct: 61  AMDEHNSLSERSNEEVPQPNIMSVMVTDVDTSEDRMAELEKKVNMLMKAVEERDFEIALL 120

Query: 121 RNHIESHDAAESRHTYTTKNKDKGKTILQEKEEKH 156
           +NHIES DAAES HT+T KN +KGK I+QE + ++
Sbjct: 121 KNHIESRDAAESSHTHTIKNANKGKAIMQESQPQN 155

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5D3C8571.5e-5780.92Ty3-gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567... [more]
A0A5D3BRH61.6e-5676.77Ty3-gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567... [more]
A0A5A7UZD51.6e-5676.77Ty3-gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2... [more]
A0A5A7T5T38.1e-5678.95Ty3-gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2... [more]
A0A5A7TZU92.3e-5576.13Ribonuclease H OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold498G00940... [more]

Pages

Match NameE-valueIdentityDescription
TYK07338.13.0e-5780.92ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa][more]
TYK02263.13.4e-5676.77ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa][more]
KAA0060608.13.4e-5676.77ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa][more]
KAA0036729.11.7e-5578.95ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa][more]
KAA0047477.14.8e-5576.13uncharacterized protein E6C27_scaffold498G00940 [Cucumis melo var. makuwa][more]

Pages

Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 89..109
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 188..203
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..18
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 37..51
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..81
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 188..217

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
PI0000470.1PI0000470.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0071897 DNA biosynthetic process
biological_process GO:0015074 DNA integration
biological_process GO:0006310 DNA recombination
biological_process GO:0090502 RNA phosphodiester bond hydrolysis, endonucleolytic
molecular_function GO:0003887 DNA-directed DNA polymerase activity
molecular_function GO:0003723 RNA binding
molecular_function GO:0004523 RNA-DNA hybrid ribonuclease activity