PI0000470 (gene) Melon (PI 482460) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGACATCCAGAGGCAACACTTCCAAAGCTCTAAGCAACATCGGAAAAAGGCCAAATACTCGCAACCGCTCAAGGGAGGCCCAATCATCTGAGGATATGCCACCCTTTGAGGTCGCAAAGAGTATCAGGGAAGAGTTGTCAAAACCACCAAAAGGTGGAATTATAATAAAGGAAAATCCTGTGATTGATGAGCACGGTTCGTCTTCTGAACACTCAAGTGAGGAGATGCCTCACCCAAATATAATGTCGGTTATGGTGACTGATGTTGATACAAGTGAAGATAGAATGACGGAGCTTGAAAAGAAGGTTAACATGCTCCTGAAGGCAGTTGAAGAAAGGAATTATGAGATTGCATCCCTGAGAAATCACATTGAAAGTCATGACGCTGCTGAATCAAGGCACACATATACCACCAAGAATAAGGACAAAGGGAAGACAATTTTGCAGGAAAGTCAACCACAAAATTCGACCTCAATTGCATCGTTGTCTGTTCAACAGTTGCAAGATATGATAGCCAACTCCATCCAGATTCAATATGGTGGAACTGCTCAAACTTTCTCTTCGTATTCCAAGCCATATACGAAAAGGATCGACAATCTGAAAATGCCAATTGGTTACCAGCCACCTAAGTTCCAACAATTTGATGGAAAAGGCAATCCAAAGCAACATGTTGCTCACTTTATCGAAACATGTGAAACTGCTGGTGCACGAGAAGATTTGTTGGTTAGACAGTTCGTCCGAACTCTCAAGGGAAATGCCTTCGACTGGTACACCGATCTTGAGCCTAAAACCATTGATAGTTGGGAGCAGTTTGAGAGGGAATTTCTCAACCGCTTCTACAACACTCGACGTATCGTTAGCATGATAGAGCTAACAACCACCAAGCAGCGAAAGGGCGAGTCAGTCATTGACTACATTAATCGCTAGAGAGCATTAAGCCTTGACTGCAAAGACAGATTAACTGAACTGTCAGTAGTGGAAATGTGCACTCAAGGAATGCATTGGAGGCTCCTATACATCTTGCAGGGAATAAAACCCCGCACCTTTGAAGAGTTAGCAACTAGAACTCATGATATGGAGTTAAGTATTGCTAATAGAGGAAACAATGACCTGTTGATCCCAGAAGTGAGAAAGGAAAAGAAAGAAATGAAGAGCACCCTGAAGGTATCAAAGGGTGCTACCAAAGAAGCTTTGGTCGTTACTACGACCCATTTAAAGTTTGTTCCTAAAGAGAAGAAGATGGAAAAATGCCAAGATGAAGGCGAAAAAAGACGCCCAACATTGAAAGAGAGGCAAGAAAAAGTTTACCCTTTTCTAGACTCTGACTTACCTGATATATTAGAGCAATTACTGGAAAAACAACTCATTCAACTTCCTGAATGTAAACGACCAACAGAAATTGGGAAGGTAAATGATCCTAATTACTGCAAATATCATCGAGTCATCAGCCACCCTGTAGAGAAATGCTTCGTGTTAAAAGAGTTAATTTTGAAATTAGCTCTAGACAAAAAAATTGAACTTGATCTCGATGATGTGGCACAAACGAATCATGTTGCAGTAATGAGTCATGTAGAGGGTCGATCACTTGCTACAGGTAGTCTAATTCAATTTGGATCTTTGAAAGCCTGTTGTTATATATTCTTCACCGGAGGTCTTACAGAAAAATGACATTTGAACTGTTCACTCAAAAGAAGAAGAAAAGCATGTGGAGGATGCTGATGAGGGATGGACGCTAGTCACGCGTCGAAAAAAGCACAAACAAAATTTTTCTAAAAAAGAATCCCGCTTGTACCGAGAGTATAAAAGAAAGGGCAAGTCTCAGAGAAGAAAAGCAAGGAAGAATGCAAGGAAGTTTCAACCAATCACCAAAGAAGGTGAGGAGCTTCCTCGACCACGACAACCAATAACTTTGAAAGACTTTTTCCCTGAAAACTTCCATTGGAAATCGTTTCGTGCCATGCTGTCAGTACAATTGAAGATGGCACTTCTCCCTCAAATTCCGCAGAAGTCAGTACAACTGGGGATGACACTTCTCCCTCAAAGTCTGCAGAAGCAACAACCAAGCTAG ATGACATCCAGAGGCAACACTTCCAAAGCTCTAAGCAACATCGGAAAAAGGCCAAATACTCGCAACCGCTCAAGGGAGGCCCAATCATCTGAGGATATGCCACCCTTTGAGGTCGCAAAGAGTATCAGGGAAGAGTTGTCAAAACCACCAAAAGGTGGAATTATAATAAAGGAAAATCCTGTGATTGATGAGCACGGTTCGTCTTCTGAACACTCAAGTGAGGAGATGCCTCACCCAAATATAATGTCGGTTATGGTGACTGATGTTGATACAAGTGAAGATAGAATGACGGAGCTTGAAAAGAAGGTTAACATGCTCCTGAAGGCAGTTGAAGAAAGGAATTATGAGATTGCATCCCTGAGAAATCACATTGAAAGTCATGACGCTGCTGAATCAAGGCACACATATACCACCAAGAATAAGGACAAAGGGAAGACAATTTTGCAGGAAAAAGAAGAAAAGCATGTGGAGGATGCTGATGAGGGATGGACGCTAGTCACGCGTCGAAAAAAGCACAAACAAAATTTTTCTAAAAAAGAATCCCGCTTGTACCGAGAGTATAAAAGAAAGGGCAAGTCTCAGAGAAGAAAAGCAAGGAAGAATGCAAGGAAGTTTCAACCAATCACCAAAGAAGGTGAGGAGCTTCCTCGACCACGACAACCAATAACTTTGAAAGACTTTTTCCCTGAAAACTTCCATTGGAAATCGTTTCGTGCCATGCTGTCAGTACAATTGAAGATGGCACTTCTCCCTCAAATTCCGCAGAAGTCAGTACAACTGGGGATGACACTTCTCCCTCAAAGTCTGCAGAAGCAACAACCAAGCTAG ATGACATCCAGAGGCAACACTTCCAAAGCTCTAAGCAACATCGGAAAAAGGCCAAATACTCGCAACCGCTCAAGGGAGGCCCAATCATCTGAGGATATGCCACCCTTTGAGGTCGCAAAGAGTATCAGGGAAGAGTTGTCAAAACCACCAAAAGGTGGAATTATAATAAAGGAAAATCCTGTGATTGATGAGCACGGTTCGTCTTCTGAACACTCAAGTGAGGAGATGCCTCACCCAAATATAATGTCGGTTATGGTGACTGATGTTGATACAAGTGAAGATAGAATGACGGAGCTTGAAAAGAAGGTTAACATGCTCCTGAAGGCAGTTGAAGAAAGGAATTATGAGATTGCATCCCTGAGAAATCACATTGAAAGTCATGACGCTGCTGAATCAAGGCACACATATACCACCAAGAATAAGGACAAAGGGAAGACAATTTTGCAGGAAAAAGAAGAAAAGCATGTGGAGGATGCTGATGAGGGATGGACGCTAGTCACGCGTCGAAAAAAGCACAAACAAAATTTTTCTAAAAAAGAATCCCGCTTGTACCGAGAGTATAAAAGAAAGGGCAAGTCTCAGAGAAGAAAAGCAAGGAAGAATGCAAGGAAGTTTCAACCAATCACCAAAGAAGGTGAGGAGCTTCCTCGACCACGACAACCAATAACTTTGAAAGACTTTTTCCCTGAAAACTTCCATTGGAAATCGTTTCGTGCCATGCTGTCAGTACAATTGAAGATGGCACTTCTCCCTCAAATTCCGCAGAAGTCAGTACAACTGGGGATGACACTTCTCCCTCAAAGTCTGCAGAAGCAACAACCAAGCTAG MTSRGNTSKALSNIGKRPNTRNRSREAQSSEDMPPFEVAKSIREELSKPPKGGIIIKENPVIDEHGSSSEHSSEEMPHPNIMSVMVTDVDTSEDRMTELEKKVNMLLKAVEERNYEIASLRNHIESHDAAESRHTYTTKNKDKGKTILQEKEEKHVEDADEGWTLVTRRKKHKQNFSKKESRLYREYKRKGKSQRRKARKNARKFQPITKEGEELPRPRQPITLKDFFPENFHWKSFRAMLSVQLKMALLPQIPQKSVQLGMTLLPQSLQKQQPS Homology
BLAST of PI0000470 vs. ExPASy TrEMBL
Match: A0A5D3C857 (Ty3-gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold202G00540 PE=4 SV=1) HSP 1 Score: 233.0 bits (593), Expect = 1.5e-57 Identity = 123/152 (80.92%), Postives = 138/152 (90.79%), Query Frame = 0
BLAST of PI0000470 vs. ExPASy TrEMBL
Match: A0A5D3BRH6 (Ty3-gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold18G00640 PE=4 SV=1) HSP 1 Score: 229.6 bits (584), Expect = 1.6e-56 Identity = 119/155 (76.77%), Postives = 141/155 (90.97%), Query Frame = 0
BLAST of PI0000470 vs. ExPASy TrEMBL
Match: A0A5A7UZD5 (Ty3-gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold22G004860 PE=4 SV=1) HSP 1 Score: 229.6 bits (584), Expect = 1.6e-56 Identity = 119/155 (76.77%), Postives = 141/155 (90.97%), Query Frame = 0
BLAST of PI0000470 vs. ExPASy TrEMBL
Match: A0A5A7T5T3 (Ty3-gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1244G00140 PE=4 SV=1) HSP 1 Score: 227.3 bits (578), Expect = 8.1e-56 Identity = 120/152 (78.95%), Postives = 136/152 (89.47%), Query Frame = 0
BLAST of PI0000470 vs. ExPASy TrEMBL
Match: A0A5A7TZU9 (Ribonuclease H OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold498G00940 PE=4 SV=1) HSP 1 Score: 225.7 bits (574), Expect = 2.3e-55 Identity = 118/155 (76.13%), Postives = 139/155 (89.68%), Query Frame = 0
BLAST of PI0000470 vs. NCBI nr
Match: TYK07338.1 (ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 233.0 bits (593), Expect = 3.0e-57 Identity = 123/152 (80.92%), Postives = 138/152 (90.79%), Query Frame = 0
BLAST of PI0000470 vs. NCBI nr
Match: TYK02263.1 (ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 229.6 bits (584), Expect = 3.4e-56 Identity = 119/155 (76.77%), Postives = 141/155 (90.97%), Query Frame = 0
BLAST of PI0000470 vs. NCBI nr
Match: KAA0060608.1 (ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 229.6 bits (584), Expect = 3.4e-56 Identity = 119/155 (76.77%), Postives = 141/155 (90.97%), Query Frame = 0
BLAST of PI0000470 vs. NCBI nr
Match: KAA0036729.1 (ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 227.3 bits (578), Expect = 1.7e-55 Identity = 120/152 (78.95%), Postives = 136/152 (89.47%), Query Frame = 0
BLAST of PI0000470 vs. NCBI nr
Match: KAA0047477.1 (uncharacterized protein E6C27_scaffold498G00940 [Cucumis melo var. makuwa]) HSP 1 Score: 225.7 bits (574), Expect = 4.8e-55 Identity = 118/155 (76.13%), Postives = 139/155 (89.68%), Query Frame = 0
The following BLAST results are available for this feature:
Pages
Pages
InterPro
Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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