PI0000452 (gene) Melon (PI 482460) v1

Overview


Name	PI0000452
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	Drebrin-like
Location	chr07: 14871322 .. 14872083 (-)
RNA-Seq Expression	PI0000452
Synteny	PI0000452

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCATCACGCCACAACAGCACTATCGCCTTGGACAAAGCGATGCTCCTTTATTGCATAATGGAGGAGCTACCCATCAATCTCGGCGAGATAGTGTGTCAGCAAATCCATGCGTTCGTGAGGCATCCACGCGGTGCAAGACCTTTTCCTTATCTCATTGAGCAACTCTGCATAAAGGTCGTGCCCGCGTTGAAGACTTTTCCAGCAATCCCCATCAAGGATGGCTTGTGTTCCATCACAAGCCTTAATCGCATCATTAGTCTCCACAAGAACAAGGCTGAAGCCAGACGCCTCAAATCCACAAAGGGTGGAAAAAGCGAGAAAGAGAATGATGAAGTGGAGATTGATGATGAAGAAGAAATGGAAAGTCTAATACATGTCCCACTTGTTCGCAAGAGAAAAGGCGAGGGAGAGGCCTCTGGATCCACAAAGCAAAAGAAACACAAGGCCAAGGATCCCATTGAACCTATTCCTCTTACGATCAAGAGCCCTGCAAAGGTGAAAAAGACAAAGGCCACCAGACCGCCTTCACCCCCGCAACCCCTTGAAGAGCCAGACCTCCCCATAATCCAAATTTCTTCTCCCCAACAATCCAAAAATCCAAGCCCTGCCCGCCCAATCCAAATTGCCTCCACTCCCAACTCCCCGCGACAAGAGGAAAATCCTCAATCTCTTGTCGCCGAAGCCCTTGATAAAATTACCTTTTCGCCAAACATCTTATCTGATGATCAGCTCAACGCGGGAATTGATGGTTTCATGTAA

mRNA sequence

ATGTCATCACGCCACAACAGCACTATCGCCTTGGACAAAGCGATGCTCCTTTATTGCATAATGGAGGAGCTACCCATCAATCTCGGCGAGATAGTGTGTCAGCAAATCCATGCGTTCGTGAGGCATCCACGCGGTGCAAGACCTTTTCCTTATCTCATTGAGCAACTCTGCATAAAGGTCGTGCCCGCGTTGAAGACTTTTCCAGCAATCCCCATCAAGGATGGCTTGTGTTCCATCACAAGCCTTAATCGCATCATTAGTCTCCACAAGAACAAGGCTGAAGCCAGACGCCTCAAATCCACAAAGGGTGGAAAAAGCGAGAAAGAGAATGATGAAGTGGAGATTGATGATGAAGAAGAAATGGAAAGTCTAATACATGTCCCACTTGTTCGCAAGAGAAAAGGCGAGGGAGAGGCCTCTGGATCCACAAAGCAAAAGAAACACAAGGCCAAGGATCCCATTGAACCTATTCCTCTTACGATCAAGAGCCCTGCAAAGGTGAAAAAGACAAAGGCCACCAGACCGCCTTCACCCCCGCAACCCCTTGAAGAGCCAGACCTCCCCATAATCCAAATTTCTTCTCCCCAACAATCCAAAAATCCAAGCCCTGCCCGCCCAATCCAAATTGCCTCCACTCCCAACTCCCCGCGACAAGAGGAAAATCCTCAATCTCTTGTCGCCGAAGCCCTTGATAAAATTACCTTTTCGCCAAACATCTTATCTGATGATCAGCTCAACGCGGGAATTGATGGTTTCATGTAA

Coding sequence (CDS)

ATGTCATCACGCCACAACAGCACTATCGCCTTGGACAAAGCGATGCTCCTTTATTGCATAATGGAGGAGCTACCCATCAATCTCGGCGAGATAGTGTGTCAGCAAATCCATGCGTTCGTGAGGCATCCACGCGGTGCAAGACCTTTTCCTTATCTCATTGAGCAACTCTGCATAAAGGTCGTGCCCGCGTTGAAGACTTTTCCAGCAATCCCCATCAAGGATGGCTTGTGTTCCATCACAAGCCTTAATCGCATCATTAGTCTCCACAAGAACAAGGCTGAAGCCAGACGCCTCAAATCCACAAAGGGTGGAAAAAGCGAGAAAGAGAATGATGAAGTGGAGATTGATGATGAAGAAGAAATGGAAAGTCTAATACATGTCCCACTTGTTCGCAAGAGAAAAGGCGAGGGAGAGGCCTCTGGATCCACAAAGCAAAAGAAACACAAGGCCAAGGATCCCATTGAACCTATTCCTCTTACGATCAAGAGCCCTGCAAAGGTGAAAAAGACAAAGGCCACCAGACCGCCTTCACCCCCGCAACCCCTTGAAGAGCCAGACCTCCCCATAATCCAAATTTCTTCTCCCCAACAATCCAAAAATCCAAGCCCTGCCCGCCCAATCCAAATTGCCTCCACTCCCAACTCCCCGCGACAAGAGGAAAATCCTCAATCTCTTGTCGCCGAAGCCCTTGATAAAATTACCTTTTCGCCAAACATCTTATCTGATGATCAGCTCAACGCGGGAATTGATGGTTTCATGTAA

Protein sequence

MSSRHNSTIALDKAMLLYCIMEELPINLGEIVCQQIHAFVRHPRGARPFPYLIEQLCIKVVPALKTFPAIPIKDGLCSITSLNRIISLHKNKAEARRLKSTKGGKSEKENDEVEIDDEEEMESLIHVPLVRKRKGEGEASGSTKQKKHKAKDPIEPIPLTIKSPAKVKKTKATRPPSPPQPLEEPDLPIIQISSPQQSKNPSPARPIQIASTPNSPRQEENPQSLVAEALDKITFSPNILSDDQLNAGIDGFM

Homology

[Close]

BLAST of PI0000452 vs. ExPASy TrEMBL
Match: A0A5D3C0C3 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold76994G00060 PE=4 SV=1)

HSP 1 Score: 139.8 bits (351), Expect = 1.6e-29
Identity = 82/167 (49.10%), Postives = 117/167 (70.06%), Query Frame = 0


Query: 1   MSSRHNSTIALDKAMLLYCIMEELPINLGEIVCQQIHAFVRHPRGARPFPYLIEQLCIKV 60
           M +  ++ I++DK +LLYC +EE+ +N+G+I+C+ I A+VRHP  ARP P LIEQ+ +K 
Sbjct: 1   MPTHQDNMISMDKTILLYCNIEEILVNVGKIICEHIQAWVRHPHDARPLPNLIEQIFLKA 60

Query: 61  VPALKTFPAIPIKDGLCSITSLNRIISLHKNKAEARRLKSTKGGKSEKENDEVEIDDEEE 120
             ALK      +KD +C+ITS++ +I+L+KNKAE + LK TK  +  KE+D++EID+EEE
Sbjct: 61  CFALKNLLKTMVKDEICTITSVSHMINLNKNKAEDKCLK-TKEIEKVKEDDKMEIDEEEE 120

Query: 121 MESLIHVPLVRKRKGEGEASGSTKQK-KHKAKDPIEPIPL-TIKSPA 166
            E     PL+RK KGE +A GS K+K K KAKD  + +PL  I SPA
Sbjct: 121 REDETLSPLIRKMKGENKAFGSRKRKRKPKAKDSRDLLPLANITSPA 166

[Close]

BLAST of PI0000452 vs. ExPASy TrEMBL
Match: A0A0A0LAN0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G263250 PE=4 SV=1)

HSP 1 Score: 129.0 bits (323), Expect = 2.7e-26
Identity = 68/152 (44.74%), Postives = 105/152 (69.08%), Query Frame = 0


Query: 1   MSSRHNSTIALDKAMLLYCIMEELPINLGEIVCQQIHAFVRHPRGARPFPYLIEQLCIKV 60
           M +RH STI++++ ML+YCIM+++ +N+G+I+   I A V+HPRGARPF YLIEQLC++ 
Sbjct: 38  MPTRHVSTISMERVMLVYCIMKKILVNIGKIISNHIIALVKHPRGARPFSYLIEQLCLRA 97

Query: 61  VPALKTFPAIPIKDGLCSITSLNRIISLHKNKAEARRLKSTKGGKSEKENDEVEIDDEEE 120
              L+  P + +KDG+   ++L+RII++HKNKA+ + LK+ +G K  KE D+   DD EE
Sbjct: 98  CLMLEKLPQVEVKDGIWLPSTLHRIIAIHKNKAKIKCLKTKEGCKVVKEIDD---DDVEE 157

Query: 121 MESLIHVPLVRKRKGEGEASGSTKQKKHKAKD 153
            +   ++P  RKR+ + +  GS K K  K +D
Sbjct: 158 EDKKDNIPQKRKRQDKEDDLGSKKAKSSKIED 186

[Close]

BLAST of PI0000452 vs. ExPASy TrEMBL
Match: A0A5A7UWQ4 (Drebrin-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold22G00550 PE=4 SV=1)

HSP 1 Score: 124.0 bits (310), Expect = 8.8e-25
Identity = 68/140 (48.57%), Postives = 100/140 (71.43%), Query Frame = 0


Query: 1   MSSRHNSTIALDKAMLLYCIMEELPINLGEIVCQQIHAFVRHPRGARPFPYLIEQLCIKV 60
           M + H+STI++++ ML+Y IMEE+ +N+GEI+ + I   V+HPRG RPFP LI++LC+K 
Sbjct: 1   MPTSHDSTISMERIMLVYYIMEEIHVNVGEIISKHIIVGVKHPRGTRPFPQLIKKLCLKA 60

Query: 61  VPALKTFPAIPIKDGLCSITSLNRIISLHKNKAEARRLKSTKGGKSEKENDEVEIDDEEE 120
             AL   P I +KDG+ S  +L RII++++NKA+ + LK+ + GKSE +  EV+  DEEE
Sbjct: 61  CSALDNLPQIGVKDGIWSSATLYRIIAINRNKAKLKYLKAKQDGKSEVK--EVDDKDEEE 120

Query: 121 MESLIHVPLVRKRKGEGEAS 141
            E   +VPL RKR+ E E+S
Sbjct: 121 KEE-DNVPLKRKRQSEDESS 137

[Close]

BLAST of PI0000452 vs. ExPASy TrEMBL
Match: A0A5A7VJ48 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold21G004490 PE=4 SV=1)

HSP 1 Score: 123.2 bits (308), Expect = 1.5e-24
Identity = 55/104 (52.88%), Postives = 78/104 (75.00%), Query Frame = 0


Query: 1   MSSRHNSTIALDKAMLLYCIMEELPINLGEIVCQQIHAFVRHPRGARPFPYLIEQLCIKV 60
           M +R  S +++D+ ML+YCIMEEL +NLGEI+C+ I   V+HP GAR FP+LIE+LC+K 
Sbjct: 98  MRTRQESIVSMDRMMLIYCIMEELQVNLGEIICEHILECVKHPYGARSFPHLIEKLCLKT 157

Query: 61  VPALKTFPAIPIKDGLCSITSLNRIISLHKNKAEARRLKSTKGG 105
             AL+  P + +KDG+C+  +L RII++HKNKA  +RLK+ K G
Sbjct: 158 CLALEKLPQVEVKDGMCTTITLPRIIAIHKNKARLKRLKTKKEG 201

[Close]

BLAST of PI0000452 vs. ExPASy TrEMBL
Match: A0A5D3BPB1 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold602G00710 PE=4 SV=1)

HSP 1 Score: 123.2 bits (308), Expect = 1.5e-24
Identity = 55/104 (52.88%), Postives = 78/104 (75.00%), Query Frame = 0


Query: 1   MSSRHNSTIALDKAMLLYCIMEELPINLGEIVCQQIHAFVRHPRGARPFPYLIEQLCIKV 60
           M +R  S +++D+ ML+YCIMEEL +NLGEI+C+ I   V+HP GAR FP+LIE+LC+K 
Sbjct: 1   MRTRQESIVSMDRMMLIYCIMEELQVNLGEIICEHILECVKHPYGARSFPHLIEKLCLKT 60

Query: 61  VPALKTFPAIPIKDGLCSITSLNRIISLHKNKAEARRLKSTKGG 105
             AL+  P + +KDG+C+  +L RII++HKNKA  +RLK+ K G
Sbjct: 61  CLALEKLPQVEVKDGMCTTITLPRIIAIHKNKARLKRLKTKKEG 104

[Close]

BLAST of PI0000452 vs. NCBI nr
Match: KAA0058409.1 (hypothetical protein E6C27_scaffold409G001210 [Cucumis melo var. makuwa] >TYK04704.1 hypothetical protein E5676_scaffold76994G00060 [Cucumis melo var. makuwa])

HSP 1 Score: 139.8 bits (351), Expect = 3.2e-29
Identity = 82/167 (49.10%), Postives = 117/167 (70.06%), Query Frame = 0


Query: 1   MSSRHNSTIALDKAMLLYCIMEELPINLGEIVCQQIHAFVRHPRGARPFPYLIEQLCIKV 60
           M +  ++ I++DK +LLYC +EE+ +N+G+I+C+ I A+VRHP  ARP P LIEQ+ +K 
Sbjct: 1   MPTHQDNMISMDKTILLYCNIEEILVNVGKIICEHIQAWVRHPHDARPLPNLIEQIFLKA 60

Query: 61  VPALKTFPAIPIKDGLCSITSLNRIISLHKNKAEARRLKSTKGGKSEKENDEVEIDDEEE 120
             ALK      +KD +C+ITS++ +I+L+KNKAE + LK TK  +  KE+D++EID+EEE
Sbjct: 61  CFALKNLLKTMVKDEICTITSVSHMINLNKNKAEDKCLK-TKEIEKVKEDDKMEIDEEEE 120

Query: 121 MESLIHVPLVRKRKGEGEASGSTKQK-KHKAKDPIEPIPL-TIKSPA 166
            E     PL+RK KGE +A GS K+K K KAKD  + +PL  I SPA
Sbjct: 121 REDETLSPLIRKMKGENKAFGSRKRKRKPKAKDSRDLLPLANITSPA 166

[Close]

BLAST of PI0000452 vs. NCBI nr
Match: KGN57727.1 (hypothetical protein Csa_009739 [Cucumis sativus])

HSP 1 Score: 129.0 bits (323), Expect = 5.7e-26
Identity = 68/152 (44.74%), Postives = 105/152 (69.08%), Query Frame = 0


Query: 1   MSSRHNSTIALDKAMLLYCIMEELPINLGEIVCQQIHAFVRHPRGARPFPYLIEQLCIKV 60
           M +RH STI++++ ML+YCIM+++ +N+G+I+   I A V+HPRGARPF YLIEQLC++ 
Sbjct: 38  MPTRHVSTISMERVMLVYCIMKKILVNIGKIISNHIIALVKHPRGARPFSYLIEQLCLRA 97

Query: 61  VPALKTFPAIPIKDGLCSITSLNRIISLHKNKAEARRLKSTKGGKSEKENDEVEIDDEEE 120
              L+  P + +KDG+   ++L+RII++HKNKA+ + LK+ +G K  KE D+   DD EE
Sbjct: 98  CLMLEKLPQVEVKDGIWLPSTLHRIIAIHKNKAKIKCLKTKEGCKVVKEIDD---DDVEE 157

Query: 121 MESLIHVPLVRKRKGEGEASGSTKQKKHKAKD 153
            +   ++P  RKR+ + +  GS K K  K +D
Sbjct: 158 EDKKDNIPQKRKRQDKEDDLGSKKAKSSKIED 186

[Close]

BLAST of PI0000452 vs. NCBI nr
Match: KAA0060282.1 (drebrin-like [Cucumis melo var. makuwa])

HSP 1 Score: 124.0 bits (310), Expect = 1.8e-24
Identity = 68/140 (48.57%), Postives = 100/140 (71.43%), Query Frame = 0


Query: 1   MSSRHNSTIALDKAMLLYCIMEELPINLGEIVCQQIHAFVRHPRGARPFPYLIEQLCIKV 60
           M + H+STI++++ ML+Y IMEE+ +N+GEI+ + I   V+HPRG RPFP LI++LC+K 
Sbjct: 1   MPTSHDSTISMERIMLVYYIMEEIHVNVGEIISKHIIVGVKHPRGTRPFPQLIKKLCLKA 60

Query: 61  VPALKTFPAIPIKDGLCSITSLNRIISLHKNKAEARRLKSTKGGKSEKENDEVEIDDEEE 120
             AL   P I +KDG+ S  +L RII++++NKA+ + LK+ + GKSE +  EV+  DEEE
Sbjct: 61  CSALDNLPQIGVKDGIWSSATLYRIIAINRNKAKLKYLKAKQDGKSEVK--EVDDKDEEE 120

Query: 121 MESLIHVPLVRKRKGEGEAS 141
            E   +VPL RKR+ E E+S
Sbjct: 121 KEE-DNVPLKRKRQSEDESS 137

[Close]

BLAST of PI0000452 vs. NCBI nr
Match: KAA0066376.1 (hypothetical protein E6C27_scaffold21G004490 [Cucumis melo var. makuwa])

HSP 1 Score: 123.2 bits (308), Expect = 3.1e-24
Identity = 55/104 (52.88%), Postives = 78/104 (75.00%), Query Frame = 0


Query: 1   MSSRHNSTIALDKAMLLYCIMEELPINLGEIVCQQIHAFVRHPRGARPFPYLIEQLCIKV 60
           M +R  S +++D+ ML+YCIMEEL +NLGEI+C+ I   V+HP GAR FP+LIE+LC+K 
Sbjct: 98  MRTRQESIVSMDRMMLIYCIMEELQVNLGEIICEHILECVKHPYGARSFPHLIEKLCLKT 157

Query: 61  VPALKTFPAIPIKDGLCSITSLNRIISLHKNKAEARRLKSTKGG 105
             AL+  P + +KDG+C+  +L RII++HKNKA  +RLK+ K G
Sbjct: 158 CLALEKLPQVEVKDGMCTTITLPRIIAIHKNKARLKRLKTKKEG 201

[Close]

BLAST of PI0000452 vs. NCBI nr
Match: TYK00908.1 (hypothetical protein E5676_scaffold602G00710 [Cucumis melo var. makuwa])

HSP 1 Score: 123.2 bits (308), Expect = 3.1e-24
Identity = 55/104 (52.88%), Postives = 78/104 (75.00%), Query Frame = 0


Query: 1   MSSRHNSTIALDKAMLLYCIMEELPINLGEIVCQQIHAFVRHPRGARPFPYLIEQLCIKV 60
           M +R  S +++D+ ML+YCIMEEL +NLGEI+C+ I   V+HP GAR FP+LIE+LC+K 
Sbjct: 1   MRTRQESIVSMDRMMLIYCIMEELQVNLGEIICEHILECVKHPYGARSFPHLIEKLCLKT 60

Query: 61  VPALKTFPAIPIKDGLCSITSLNRIISLHKNKAEARRLKSTKGG 105
             AL+  P + +KDG+C+  +L RII++HKNKA  +RLK+ K G
Sbjct: 61  CLALEKLPQVEVKDGMCTTITLPRIIAIHKNKARLKRLKTKKEG 104

The following BLAST results are available for this feature:

BLAST of PI0000452 vs.


Match Name	E-value	Identity	Description

BLAST of PI0000452 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3C0C3	1.6e-29	49.10	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A0A0LAN0	2.7e-26	44.74	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G263250 PE=4 SV=1	[more]
A0A5A7UWQ4	8.8e-25	48.57	Drebrin-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold22G00550 PE...	[more]
A0A5A7VJ48	1.5e-24	52.88	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A5D3BPB1	1.5e-24	52.88	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]

BLAST of PI0000452 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0058409.1	3.2e-29	49.10	hypothetical protein E6C27_scaffold409G001210 [Cucumis melo var. makuwa] >TYK047...	[more]
KGN57727.1	5.7e-26	44.74	hypothetical protein Csa_009739 [Cucumis sativus]	[more]
KAA0060282.1	1.8e-24	48.57	drebrin-like [Cucumis melo var. makuwa]	[more]
KAA0066376.1	3.1e-24	52.88	hypothetical protein E6C27_scaffold21G004490 [Cucumis melo var. makuwa]	[more]
TYK00908.1	3.1e-24	52.88	hypothetical protein E5676_scaffold602G00710 [Cucumis melo var. makuwa]	[more]

BLAST of PI0000452 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 94..110
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 122..155
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 190..222
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 94..223

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0000452.1	PI0000452.1	mRNA