Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCAACCAAACAACTGAATGAAAGATTGGAAAGTATTGAAAAGGAAGTTTTGGGCCTCAAGGAAATGATGCTGGATATGAAAAAGGCATTCGACCGAATGACCAAAGACATGAAAGAAAGTAGTTCCTACCGGAGAAGGGATGAATCAGGTACTTCCGACGGTTCAGTGATGAAACTGAAGGGAAAGATGAACGAATCGAAAGCCCAGGTGGAAGCTGTAGCAGGAACATTTGACAGAAGCAAGTATAAGAAGCTGGAGATGCCTCTGTTTATGGGAGAGAACCCGGAATCCTGGGTCTACCGTGCTGAACACTTTTTTTAGATTAATGATTTATCTGAGGCAGAGAAGGTCAAAGTAGTTGTGGTGAGTTTTGGCCAAGATGAGATTAACTAGTTTCGATGGAGTAACAATAGAAAGAAGATTGAGTCATGGGAAGATTTGAAGAAGAGAATGTTCGATCACTTTAGAGATCAAGGTCCTGGAAGTTGGGGCCAAGGTTGATCGCATAACACAAAATGGGTCATACAACGAGTACGTGAAAAAGTTCCTTGTGTTTCAGATGCAATAATAAGTATTCTCCGAGACACCGCTGTAAAGTTAACGAGAAAAGGGAACTTATGCTCTTTATAATGAATGAAAATGAGGGCGAATTGGAAGAAGGAATCGTCGTCGATGGAGAGGAAGAAATAGTGGAGTTGAAGAAATTAGAAGTTCCAATAGAAATAGAGATTGAACTGAGGACTTTGATGGGATTCTTAGCAAAAGGAACAATGAAGATTAGGGGTACGTAAAAGATCAAGAAGTGATTGTGTTAATCGATAGTGGCGCCACTCACAACTTCATTCATCAAAACCTTGTGGAAAAACTAGGTCTAACTATTGAGGCAGGCAACGATTTTGGAGTAATGATCGGAGATGGAACAGACAGGAGGGGAAAAGGGTTGTGCAGAAGGATAAAAATGAAGTTACCTGAGCTGACTCTCATTGCGGATTTATTGGCAGTAGAGTTGGAAAGGTAA
mRNA sequence
ATGGCAACCAAACAACTGAATGAAAGATTGGAAAGTATTGAAAAGGAAGTTTTGGGCCTCAAGGAAATGATGCTGGATATGAAAAAGGCATTCGACCGAATGACCAAAGACATGAAAGAAAGTAGTTCCTACCGGAGAAGGGATGAATCAGGTACTTCCGACGGTTCAGTGATGAAACTGAAGGGAAAGATGAACGAATCGAAAGCCCAGGTGGAAGCTGTAGCAGGAACATTTGACAGAAGCAAATGCAATAATAAGTATTCTCCGAGACACCGCTGTAAAGTTAACGAGAAAAGGGAACTTATGCTCTTTATAATGAATGAAAATGAGGGCGAATTGGAAGAAGGAATCGTCGTCGATGGAGAGGAAGAAATAGTGGAGTTGAAGAAATTAGAAGTTCCAATAGAAATAGAGATTGAACTGAGGACTTTGATGGGATTCTTAGCAAAAGGAACAATGAAGATTAGGGGTCTAACTATTGAGGCAGGCAACGATTTTGGAGTAATGATCGGAGATGGAACAGACAGGAGGGGAAAAGGGTTGTGCAGAAGGATAAAAATGAAGTTACCTGAGCTGACTCTCATTGCGGATTTATTGGCAGTAGAGTTGGAAAGGTAA
Coding sequence (CDS)
ATGGCAACCAAACAACTGAATGAAAGATTGGAAAGTATTGAAAAGGAAGTTTTGGGCCTCAAGGAAATGATGCTGGATATGAAAAAGGCATTCGACCGAATGACCAAAGACATGAAAGAAAGTAGTTCCTACCGGAGAAGGGATGAATCAGGTACTTCCGACGGTTCAGTGATGAAACTGAAGGGAAAGATGAACGAATCGAAAGCCCAGGTGGAAGCTGTAGCAGGAACATTTGACAGAAGCAAATGCAATAATAAGTATTCTCCGAGACACCGCTGTAAAGTTAACGAGAAAAGGGAACTTATGCTCTTTATAATGAATGAAAATGAGGGCGAATTGGAAGAAGGAATCGTCGTCGATGGAGAGGAAGAAATAGTGGAGTTGAAGAAATTAGAAGTTCCAATAGAAATAGAGATTGAACTGAGGACTTTGATGGGATTCTTAGCAAAAGGAACAATGAAGATTAGGGGTCTAACTATTGAGGCAGGCAACGATTTTGGAGTAATGATCGGAGATGGAACAGACAGGAGGGGAAAAGGGTTGTGCAGAAGGATAAAAATGAAGTTACCTGAGCTGACTCTCATTGCGGATTTATTGGCAGTAGAGTTGGAAAGGTAA
Protein sequence
MATKQLNERLESIEKEVLGLKEMMLDMKKAFDRMTKDMKESSSYRRRDESGTSDGSVMKLKGKMNESKAQVEAVAGTFDRSKCNNKYSPRHRCKVNEKRELMLFIMNENEGELEEGIVVDGEEEIVELKKLEVPIEIEIELRTLMGFLAKGTMKIRGLTIEAGNDFGVMIGDGTDRRGKGLCRRIKMKLPELTLIADLLAVELER
Homology
BLAST of PI0000265 vs. ExPASy TrEMBL
Match:
A0A5A7TZQ5 (Peroxidase 64 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold600G001280 PE=4 SV=1)
HSP 1 Score: 148.7 bits (374), Expect = 2.7e-32
Identity = 107/260 (41.15%), Postives = 142/260 (54.62%), Query Frame = 0
Query: 1 MATKQLNERLESIEKEVLGLKEMMLDMKKAFDRMTKDMKESSSYRRRDESGTSDGSVMKL 60
MA +Q+ ER+E +EKE+LGLKE ML++KK DRM +M+E++SY+RR+ES TS+ S MKL
Sbjct: 1 MAQRQMEERVEGMEKEILGLKETMLELKKTMDRMADEMRENTSYKRREESSTSNASAMKL 60
Query: 61 KGKMNESKA--------------QVEAV----------------------AGTFDRSK-- 120
KGK ES QVE V A R+K
Sbjct: 61 KGKSEESDVETKMNTPAGLEPCLQVEVVSRRPQTLEACMKEAQLVTDQNLALKLARAKLG 120
Query: 121 ---------CNNKYSPRHRCKVNEKRELMLFIM--------NENEGELEEGIVVDGEEEI 180
N K S + V K + + + + EG EE I+ EEEI
Sbjct: 121 IPEPKGGETSNIKASGGNEQGVQRKTKFQMKQITIPVKGNYQKEEGTEEEEIIEGMEEEI 180
Query: 181 VELKKLEVPIEIEIELRTLMGFLAKGTMKIRGLTIEAGNDFGVMIGDGTDRRGKGLCRRI 206
VELK L+VP EIEL+T+MGF KGT+K++G+ G FGV IGDGT GK C+R+
Sbjct: 181 VELKNLKVPEGTEIELKTIMGFATKGTVKLKGM----GTTFGVTIGDGTYYEGKRQCKRV 240
BLAST of PI0000265 vs. ExPASy TrEMBL
Match:
A0A5D3DJ34 (Retrotransposable element Tf2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold278G00490 PE=4 SV=1)
HSP 1 Score: 138.3 bits (347), Expect = 3.7e-29
Identity = 104/272 (38.24%), Postives = 136/272 (50.00%), Query Frame = 0
Query: 6 LNERLESIEKEVLGLKEMMLDMKKAFDRMTKDMKESSSYRRRDESGTSDGSVMKLKGKMN 65
+ ER++ EKE++GLKEMML+MKKA +R+T +MKES SY++R+ESGTSDGS+MKLKGKM
Sbjct: 1 MEERVDGTEKEIMGLKEMMLEMKKAVERLTDEMKESQSYKKREESGTSDGSMMKLKGKME 60
Query: 66 ESKAQVEAVAGTFDRSK------------------------------------------- 125
E++ E + D+SK
Sbjct: 61 ETELITETNVTSVDKSKYKKLEMPITGRGGSSTGRKIVENERVVQRKTNFQMKQITIPIK 120
Query: 126 -----------------------------CNNKYSPRHRCKVNEKRELMLFIMNENEGEL 185
CN KYSP H CK EKRELM FI+NE E
Sbjct: 121 GNYKRREPPIKRLSDAEFRARLDRGLCFRCNGKYSPGHHCKTKEKRELMFFILNEEEEAE 180
Query: 186 EEGIVVDGEEEIVELKKLEVPIEIEIELRTLMGFLAKGTMKIRGLTIEAGNDFGVM-IGD 204
EE + EE VELK LE+ EIEL+T+ G +K + + EAG +
Sbjct: 181 EEHSKDEKEERTVELKNLEIIEGTEIELKTMTGLTSK--VLSGRIENEAGTRYSFWGYYW 240
BLAST of PI0000265 vs. ExPASy TrEMBL
Match:
A0A5D3BLT6 (Chromo domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold562G00860 PE=4 SV=1)
HSP 1 Score: 136.0 bits (341), Expect = 1.8e-28
Identity = 93/250 (37.20%), Postives = 123/250 (49.20%), Query Frame = 0
Query: 23 MMLDMKKAFDRMTKDMKESSSYRRRDESGTSDGSVMKLKGKM------------------ 82
MML++KKA D M DM+++SSYRRR+ SG S+G VMK KGK
Sbjct: 1 MMLELKKAVDHMPDDMRDNSSYRRRNGSGMSNGYVMKQKGKWLTQKLFWTTRQGLWIELA 60
Query: 83 --------------------------NESKAQVE------AVAGTFDRS----------- 142
N S+A + + G + +
Sbjct: 61 TAELSNQGFSGAVNQVFKKTGGGEKGNSSRADFQMKQITIPIKGNYSKGEPPMKRLDKGL 120
Query: 143 --KCNNKYSPRHRCKVNEKRELMLFIMNENEGELEEGIVVDGEEEIVELKKLEVPIEIEI 181
+CN KYS H CK+ EKRELMLFIMNE EGE E ++++GE+E++ELK LEVP E EI
Sbjct: 121 CFRCNEKYSHGHSCKIKEKRELMLFIMNEEEGEGEGNVLIEGEKEVMELKNLEVPPETEI 180
BLAST of PI0000265 vs. ExPASy TrEMBL
Match:
A0A5A7UG23 (Chromo domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold437G00300 PE=4 SV=1)
HSP 1 Score: 125.9 bits (315), Expect = 1.9e-25
Identity = 96/293 (32.76%), Postives = 125/293 (42.66%), Query Frame = 0
Query: 23 MMLDMKKAFDRMTKDMKESSSYRRRDESGTSDGSVMKLKGKM------------------ 82
MML++KKA D M DM+++SSYRRR+ SGTSDG VMK KGK
Sbjct: 1 MMLELKKAVDHMPDDMRDNSSYRRRNGSGTSDGYVMKQKGKWPTQKLFWTTRQGLWIEVS 60
Query: 83 ------------------------------------------------------------ 142
Sbjct: 61 IKSWKCPCSLERTQNQGFTVQNIFSRLMNDLLKAEKVKVAVLATAELSNQGFSGAVNQVF 120
Query: 143 ---------NESKAQVE------AVAGTFDRS-------------KCNNKYSPRHRCKVN 181
N S+A + + G + + +CN KYS HRCK+
Sbjct: 121 KKTGGGEKGNSSRADFQMKQITIPIKGNYSKGEPPMKRLDKGLCFRCNEKYSHGHRCKIK 180
BLAST of PI0000265 vs. ExPASy TrEMBL
Match:
A0A5D3BB24 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold506G001070 PE=4 SV=1)
HSP 1 Score: 120.9 bits (302), Expect = 6.1e-24
Identity = 77/176 (43.75%), Postives = 100/176 (56.82%), Query Frame = 0
Query: 23 MMLDMKKAFDRMTKDMKESSSYRRRDESGTSDGSVMKLKGKMNESKAQVEA--------- 82
MMLD+KK DRM +DM+E+++Y+R++ESGTSDGSVMKLK KM + + +A
Sbjct: 64 MMLDLKKVIDRMAEDMRENTNYKRKEESGTSDGSVMKLKEKMEDLEIGGDASSTKIVGGN 123
Query: 83 ------------------VAGTFDRSK----------------------CNNKYSPRHRC 142
+ G + + + CN YS HRC
Sbjct: 124 EKGNPRKTEFQMKQITIPIKGNYPKGEPPVKRLLDTKFRARLDKGLCFICNEIYSHGHRC 183
Query: 143 KVNEKRELMLFIMNENEGELEEGIVVDGEEEIVELKKLEVPIEIEIELRTLMGFLA 150
KV EKRELMLFI NE EG EG++V+ EE+IVELK LEVP+E EIEL+T+MGF A
Sbjct: 184 KVKEKRELMLFIFNEEEG--AEGVIVEIEEDIVELKNLEVPVETEIELKTIMGFAA 237
BLAST of PI0000265 vs. NCBI nr
Match:
KAA0048514.1 (peroxidase 64 [Cucumis melo var. makuwa] >TYK28305.1 peroxidase 64 [Cucumis melo var. makuwa])
HSP 1 Score: 148.7 bits (374), Expect = 5.6e-32
Identity = 107/260 (41.15%), Postives = 142/260 (54.62%), Query Frame = 0
Query: 1 MATKQLNERLESIEKEVLGLKEMMLDMKKAFDRMTKDMKESSSYRRRDESGTSDGSVMKL 60
MA +Q+ ER+E +EKE+LGLKE ML++KK DRM +M+E++SY+RR+ES TS+ S MKL
Sbjct: 1 MAQRQMEERVEGMEKEILGLKETMLELKKTMDRMADEMRENTSYKRREESSTSNASAMKL 60
Query: 61 KGKMNESKA--------------QVEAV----------------------AGTFDRSK-- 120
KGK ES QVE V A R+K
Sbjct: 61 KGKSEESDVETKMNTPAGLEPCLQVEVVSRRPQTLEACMKEAQLVTDQNLALKLARAKLG 120
Query: 121 ---------CNNKYSPRHRCKVNEKRELMLFIM--------NENEGELEEGIVVDGEEEI 180
N K S + V K + + + + EG EE I+ EEEI
Sbjct: 121 IPEPKGGETSNIKASGGNEQGVQRKTKFQMKQITIPVKGNYQKEEGTEEEEIIEGMEEEI 180
Query: 181 VELKKLEVPIEIEIELRTLMGFLAKGTMKIRGLTIEAGNDFGVMIGDGTDRRGKGLCRRI 206
VELK L+VP EIEL+T+MGF KGT+K++G+ G FGV IGDGT GK C+R+
Sbjct: 181 VELKNLKVPEGTEIELKTIMGFATKGTVKLKGM----GTTFGVTIGDGTYYEGKRQCKRV 240
BLAST of PI0000265 vs. NCBI nr
Match:
TYK23478.1 (Retrotransposable element Tf2 [Cucumis melo var. makuwa])
HSP 1 Score: 138.3 bits (347), Expect = 7.6e-29
Identity = 104/272 (38.24%), Postives = 136/272 (50.00%), Query Frame = 0
Query: 6 LNERLESIEKEVLGLKEMMLDMKKAFDRMTKDMKESSSYRRRDESGTSDGSVMKLKGKMN 65
+ ER++ EKE++GLKEMML+MKKA +R+T +MKES SY++R+ESGTSDGS+MKLKGKM
Sbjct: 1 MEERVDGTEKEIMGLKEMMLEMKKAVERLTDEMKESQSYKKREESGTSDGSMMKLKGKME 60
Query: 66 ESKAQVEAVAGTFDRSK------------------------------------------- 125
E++ E + D+SK
Sbjct: 61 ETELITETNVTSVDKSKYKKLEMPITGRGGSSTGRKIVENERVVQRKTNFQMKQITIPIK 120
Query: 126 -----------------------------CNNKYSPRHRCKVNEKRELMLFIMNENEGEL 185
CN KYSP H CK EKRELM FI+NE E
Sbjct: 121 GNYKRREPPIKRLSDAEFRARLDRGLCFRCNGKYSPGHHCKTKEKRELMFFILNEEEEAE 180
Query: 186 EEGIVVDGEEEIVELKKLEVPIEIEIELRTLMGFLAKGTMKIRGLTIEAGNDFGVM-IGD 204
EE + EE VELK LE+ EIEL+T+ G +K + + EAG +
Sbjct: 181 EEHSKDEKEERTVELKNLEIIEGTEIELKTMTGLTSK--VLSGRIENEAGTRYSFWGYYW 240
BLAST of PI0000265 vs. NCBI nr
Match:
TYJ99691.1 (hypothetical protein E5676_scaffold562G00860 [Cucumis melo var. makuwa])
HSP 1 Score: 136.0 bits (341), Expect = 3.8e-28
Identity = 93/250 (37.20%), Postives = 123/250 (49.20%), Query Frame = 0
Query: 23 MMLDMKKAFDRMTKDMKESSSYRRRDESGTSDGSVMKLKGKM------------------ 82
MML++KKA D M DM+++SSYRRR+ SG S+G VMK KGK
Sbjct: 1 MMLELKKAVDHMPDDMRDNSSYRRRNGSGMSNGYVMKQKGKWLTQKLFWTTRQGLWIELA 60
Query: 83 --------------------------NESKAQVE------AVAGTFDRS----------- 142
N S+A + + G + +
Sbjct: 61 TAELSNQGFSGAVNQVFKKTGGGEKGNSSRADFQMKQITIPIKGNYSKGEPPMKRLDKGL 120
Query: 143 --KCNNKYSPRHRCKVNEKRELMLFIMNENEGELEEGIVVDGEEEIVELKKLEVPIEIEI 181
+CN KYS H CK+ EKRELMLFIMNE EGE E ++++GE+E++ELK LEVP E EI
Sbjct: 121 CFRCNEKYSHGHSCKIKEKRELMLFIMNEEEGEGEGNVLIEGEKEVMELKNLEVPPETEI 180
BLAST of PI0000265 vs. NCBI nr
Match:
KAA0054752.1 (hypothetical protein E6C27_scaffold437G00300 [Cucumis melo var. makuwa])
HSP 1 Score: 125.9 bits (315), Expect = 3.9e-25
Identity = 96/293 (32.76%), Postives = 125/293 (42.66%), Query Frame = 0
Query: 23 MMLDMKKAFDRMTKDMKESSSYRRRDESGTSDGSVMKLKGKM------------------ 82
MML++KKA D M DM+++SSYRRR+ SGTSDG VMK KGK
Sbjct: 1 MMLELKKAVDHMPDDMRDNSSYRRRNGSGTSDGYVMKQKGKWPTQKLFWTTRQGLWIEVS 60
Query: 83 ------------------------------------------------------------ 142
Sbjct: 61 IKSWKCPCSLERTQNQGFTVQNIFSRLMNDLLKAEKVKVAVLATAELSNQGFSGAVNQVF 120
Query: 143 ---------NESKAQVE------AVAGTFDRS-------------KCNNKYSPRHRCKVN 181
N S+A + + G + + +CN KYS HRCK+
Sbjct: 121 KKTGGGEKGNSSRADFQMKQITIPIKGNYSKGEPPMKRLDKGLCFRCNEKYSHGHRCKIK 180
BLAST of PI0000265 vs. NCBI nr
Match:
XP_031745419.1 (uncharacterized protein LOC116405630 [Cucumis sativus])
HSP 1 Score: 122.1 bits (305), Expect = 5.6e-24
Identity = 63/123 (51.22%), Postives = 84/123 (68.29%), Query Frame = 0
Query: 82 KCNNKYSPRHRCKVNEKRELMLFIMNENEGELEEGIVVDGEEEIVELKKLEVPIEIEIEL 141
+CN KY+P HRCK EKRELML I+NE E E D E++EL LE+ ++ IEL
Sbjct: 273 RCNEKYAPGHRCKGREKRELMLLILNEEEDHKREEDTEDEASEVIELNHLELNMDNPIEL 332
Query: 142 RTLMGFLAKGTMKIRG-LTIEAGNDFGVMIGDGTDRRGKGLCRRIKMKLPELTLIADLLA 201
R + G +KGTMK++G L+I+ G FGV IG+ G G+C+R+K+KL ELT++AD LA
Sbjct: 333 RLITGVTSKGTMKLKGHLSIDPGTRFGVTIGNDNQCEGSGICKRVKVKLKELTIVADFLA 392
Query: 202 VEL 204
VEL
Sbjct: 393 VEL 395
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A5A7TZQ5 | 2.7e-32 | 41.15 | Peroxidase 64 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold600G001280... | [more] |
A0A5D3DJ34 | 3.7e-29 | 38.24 | Retrotransposable element Tf2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sc... | [more] |
A0A5D3BLT6 | 1.8e-28 | 37.20 | Chromo domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676... | [more] |
A0A5A7UG23 | 1.9e-25 | 32.76 | Chromo domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27... | [more] |
A0A5D3BB24 | 6.1e-24 | 43.75 | Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
Match Name | E-value | Identity | Description | |
KAA0048514.1 | 5.6e-32 | 41.15 | peroxidase 64 [Cucumis melo var. makuwa] >TYK28305.1 peroxidase 64 [Cucumis melo... | [more] |
TYK23478.1 | 7.6e-29 | 38.24 | Retrotransposable element Tf2 [Cucumis melo var. makuwa] | [more] |
TYJ99691.1 | 3.8e-28 | 37.20 | hypothetical protein E5676_scaffold562G00860 [Cucumis melo var. makuwa] | [more] |
KAA0054752.1 | 3.9e-25 | 32.76 | hypothetical protein E6C27_scaffold437G00300 [Cucumis melo var. makuwa] | [more] |
XP_031745419.1 | 5.6e-24 | 51.22 | uncharacterized protein LOC116405630 [Cucumis sativus] | [more] |
Match Name | E-value | Identity | Description | |