PI0000232 (gene) Melon (PI 482460) v1

Overview
NamePI0000232
Typegene
OrganismCucumis metuliferus (Melon (PI 482460) v1)
DescriptionProtein translocase complex, SecE/Sec61-gamma subunit
Locationchr01: 5134494 .. 5138016 (-)
RNA-Seq ExpressionPI0000232
SyntenyPI0000232
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATTCCACACAAACACAAGTCTCTTTTTATATATATAATTTCACCTAAATTTGACGTGGGTAAGGAGTAAAAGAAAATATCATTTTTAAGGCGTGGGGCAATTCTCGTTTCCTCCCCCTCAATTTGGGTCATCCATACCAAAATTAGAAAAAGCCTTTAAGCCTTAAACCTTCATTTCTTCGTCTCCCTCTCCTTTGCAGCTGCCCAACACACCCGGTTGCGGACCTCCTCGCCGGCAACCACAGACCAGGAGCGACGGCCGGCAAGCCTCCTACTACAGCGGCCCTAAATTCTTCTTGGTTTCGACAAACTCATACCCCGTGAGCTCTTGTGTTGACGGCAGTACCCACGAAACCCAACCGAGGTGACTGCGTTAGCTTCGTCGGTGTACTCTTTTTTGACGGCGAGCCTCCTCTTCTCCAGCGCTCTTTAGTTTGTGAATGCAGCACCAGCAGCGTTTTTTTTACTACTTTCGAAGTATTCGATTAGGTTCTTTTAAGTATTATCATATTTCGAACCCTTTCGGACTCGAGTTAAAGTATGTTAGATTATTCTTTAACACGCTGAAGCTATCTGTTTGTAGTATTGGACGGATTTGAAGTGGTTGATTAAAGTTTATGGTGGATTTTGAGTAAAAATATTCATCATGAAGACATGAGCAATCTCTCCATGTCTCTTATTGGTGATTAAAGTTTTATAGCAGAGTTCTAACACCTATACACTGTTTCTATTGTTTAGGCTTATATGTTGTTGATGCTTTGTTCAAGGTTTTGGATTTTGGATTGAGAACAATAAGTTTTTTATCCAGGTAAGCAGTTTCCACATCCCTTTCAAAATATAAAATTGATAAAATTGTGTTTTGGTTATTGTGTTTTCAAAAATGTTGCAAGTATGTGTGAACATTTGAAAGTACGTTTGTATGATTTGAGGATTGATCGAAATTGTTTTGTTTGTTTCTAATGGTTTTTGCTAAATGAAAGCATGCGACTATTTCAAACGACTTTTTTGGATGTGTTTTGAAATTGAAAGTATGTTTTAGTTCGGTCACTTATGAAAGTTTGAATGGTTAGGTTTGAAGAATTTTCAATTGAAATTGCTAATTGAAACTACATGCTTTGCTTCAAATGCTTGTTTAAGATTTCTGATTGATGCGAAATGGTTATTTGGAGACGCCAAGATTTTGTTTTGAAAATTGTTTGCTTATTTTTGTAGTCACGGCAAATTGATTGATTGAAACTTATGTGAGAAGACACATTTTGTGGTTTGGCATTCCTTTGGATTGAAGATTTATGTGTTGCACTCATGTGACCTCACATACAAGTAATTGAATGTTTTGGTCGATTGCTAATGGACTTCTCTAATTGAAGGAATGAATGACTGGTGTTTCTAATGAGTAACCACATGTCTCTGTTATGCATCTTTTCCACTCTGATAATCGAAAGTATTGATTGATTGAAAATTCCGTGTAATCGAAAGTATTGAAAGTCTTGAAATATTTGTTGTTTTAAGGGCTGAAAGTTTTGTTTGTTTAAAGGTGTCACAAGTTTATTCGAATGTTTTGGTTTTATTGGAACTACTATATGAAAGTTTTAGATCGAGACATTTAGTTTTAAAAGCTTATTTGATTGAATGATTTTGGTTTTGAAAGCATTGTCTGTAACAAAGTTTTCACTGAAAGTTTAGCGAGGATTTATATTTTCGTTTACAAAAATTTGAAAGAAAATGAATTTTGAAGCTTGATATTGGAATTGCTTGTTAAGTATTTTTTTACTCATTTTTTTTTTCCAAAAATGTTTTCAGATGAAGGATTAGGTGACACTTTTGAAAGAAGTAAAGTTTGGCCTTGATGCTTTTGTTTTAAGGATTTGTTAGATTATCTTAAAAATCGTTTTTGCTGAATCATATAAGTTGTTATACTGTGCGAAGGTTATGTCTTTGCATTATTGTTTGTTATAGCTTGGTTGAAAAATGCAGGCCATTACACTGTTGAAACACTATTGTAGCGCAAGTATCATAATCTATCTTATTCAGAGTAACAGTTAAGCTGTTTGATAGAGTTTCGAGCAACTGGCAAATCTTATAATAAATTGCATGTTTGTTTGTCTGTTTCACATTGATTTTGTAATGGATTGATAGTAAGCATTTTTTGTATCCTGTTCCAGTGGTGTTGTTGAACTCTTGCTCTAAAATGGTGATCACTTCTACACTTGGAACTCATCATATTGGTAAATCCACTTTTCTTTTTCTCATAATATATCCCTTTTTTCTTTCTTTTGTTCAAGTATCATTTTGGTCCTCATTGAAACTTGTTTATTCTAGGTATGATTTGTCTTCCTCAGTCCAAGGAGCCATACCACGTTCTACAGTACAACACAACAAGATTCAACAAATCCACTCTCTTTCAGAGACTGCACACAAGGGTACTTTCTACTCATTTGAAACTTAAAATTTGATTGCTCTTACAATCTGATCTTTCAATTTCTGTTTGTTGCTTTAGATTTCCAGAAGGAGTGGACATCATCTCTATGCTGGGAGAATGGACTTTAACCATGCTGCATCGGGACGAAATTATCAGCAACCGAGCTTTATTGATGAATGGCCTCCAGAACCTTTCTTCTTGAGTCTAATTAAAGAAACCTTTTGGTAATCTTTCTCATCTCTTTCTCCCGTCTTAATCATGAATGTTGGACATTGAAGATTAGAGCTGGTTTTAGTCCTACAATCGCTTAGTTGTATTACTGGAGGTATATTTTCCCTGTTCTGCTTATTCTAATGTGCCCCATATCTACGCATCATTCGACGGTGTCGGATGGTTAATTTTTTTTGTTCATTCAAAAAAAATCTCATGAATGTTGGACCTTCATGTTTTAGAATGGTTTTGTTTTGAACTTCAGGGGATTGAGATCGTTGTTAATATTTCTGGTCGAGCAGCCCAGTCAACTGAAGTACATTGAATGGCCTAGCTTACAAAGCACGGTATGAAGGCAGGATTAGTATGTTAAATACTGCACATGTGAATTGTCTTCTTGTAGTTGTAAGATTCATATTTGATAAAACACTTTAATTCATGATGCCAATTCACTTAATATTATCTCTGAATTTGGCTTTTATTGTAATTTCAATCCAATTTGGTACAGCTGAAGACTGCCACATTAGCTCTCGTTCTCGTTGCTCTGTTGATCGTAGCACTCTCATCAGTGGACTCGGCTCTCAGCTATGTTTTGACTTTACTTCTCAGAAGAACCTCATAATAAATGCTGCTACTCTTCTCCTATTGGTCTATCAGTATGTCAGAAATTTAACCTCTTTGCCATTTTTAAAATGATTACTGAGAGTGAGAGTTCTTGGTATGTTAATGTGTTGGAGATAGTTCTGAAATAGATAATGCATAACTCTTTGAAATCGCACAACTAAGAATGTAAAGAATGTCGTTTTCCATGTTTCTCACATACGTATACTAACGACCATCCCCATACGTACAATTAGGGTACATTCATAAGTAACAATGATACACTTCCTTTGTA

mRNA sequence

ATTCCACACAAACACAAGTCTCTTTTTATATATATAATTTCACCTAAATTTGACGTGGGTAAGGAGTAAAAGAAAATATCATTTTTAAGGCGTGGGGCAATTCTCGTTTCCTCCCCCTCAATTTGGGTCATCCATACCAAAATTAGAAAAAGCCTTTAAGCCTTAAACCTTCATTTCTTCGTCTCCCTCTCCTTTGCAGCTGCCCAACACACCCGGTTGCGGACCTCCTCGCCGGCAACCACAGACCAGGAGCGACGGCCGGCAAGCCTCCTACTACAGCGGCCCTAAATTCTTCTTGGTTTCGACAAACTCATACCCCGTGAGCTCTTGTGTTGACGGCAGTACCCACGAAACCCAACCGAGGTGACTGCGTTAGCTTCGTCGGTGTACTCTTTTTTGACGGCGAGCCTCCTCTTCTCCAGCGCTCTTTAGTTTGTGAATGCAGCACCAGCAGCGTTTTTTTTACTACTTTCGAAGTATTCGATTAGGTTCTTTTAAGTATTATCATATTTCGAACCCTTTCGGACTCGAGTTAAAGTATGTTAGATTATTCTTTAACACGCTGAAGCTATCTGTTTGTAGTATTGGACGGATTTGAAGTGGTTGATTAAAGTTTATGGTGGATTTTGAGTAAAAATATTCATCATGAAGACATGAGCAATCTCTCCATGTCTCTTATTGGTGATTAAAGTTTTATAGCAGAGTTCTAACACCTATACACTGTTTCTATTGTTTAGGCTTATATGTTGTTGATGCTTTGTTCAAGGTTTTGGATTTTGGATTGAGAACAATAAGTTTTTTATCCAGTGGTGTTGTTGAACTCTTGCTCTAAAATGGTGATCACTTCTACACTTGGAACTCATCATATTGGTATGATTTGTCTTCCTCAGTCCAAGGAGCCATACCACGTTCTACAGTACAACACAACAAGATTCAACAAATCCACTCTCTTTCAGAGACTGCACACAAGGATTTCCAGAAGGAGTGGACATCATCTCTATGCTGGGAGAATGGACTTTAACCATGCTGCATCGGGACGAAATTATCAGCAACCGAGCTTTATTGATGAATGGCCTCCAGAACCTTTCTTCTTGAGTCTAATTAAAGAAACCTTTTGGGGATTGAGATCGTTGTTAATATTTCTGGTCGAGCAGCCCAGTCAACTGAAGTACATTGAATGGCCTAGCTTACAAAGCACGCTGAAGACTGCCACATTAGCTCTCGTTCTCGTTGCTCTGTTGATCGTAGCACTCTCATCAGTGGACTCGGCTCTCAGCTATGTTTTGACTTTACTTCTCAGAAGAACCTCATAATAAATGCTGCTACTCTTCTCCTATTGGTCTATCAGTATGTCAGAAATTTAACCTCTTTGCCATTTTTAAAATGATTACTGAGAGTGAGAGTTCTTGGTATGTTAATGTGTTGGAGATAGTTCTGAAATAGATAATGCATAACTCTTTGAAATCGCACAACTAAGAATGTAAAGAATGTCGTTTTCCATGTTTCTCACATACGTATACTAACGACCATCCCCATACGTACAATTAGGGTACATTCATAAGTAACAATGATACACTTCCTTTGTA

Coding sequence (CDS)

ATGGTGATCACTTCTACACTTGGAACTCATCATATTGGTATGATTTGTCTTCCTCAGTCCAAGGAGCCATACCACGTTCTACAGTACAACACAACAAGATTCAACAAATCCACTCTCTTTCAGAGACTGCACACAAGGATTTCCAGAAGGAGTGGACATCATCTCTATGCTGGGAGAATGGACTTTAACCATGCTGCATCGGGACGAAATTATCAGCAACCGAGCTTTATTGATGAATGGCCTCCAGAACCTTTCTTCTTGAGTCTAATTAAAGAAACCTTTTGGGGATTGAGATCGTTGTTAATATTTCTGGTCGAGCAGCCCAGTCAACTGAAGTACATTGAATGGCCTAGCTTACAAAGCACGCTGAAGACTGCCACATTAGCTCTCGTTCTCGTTGCTCTGTTGATCGTAGCACTCTCATCAGTGGACTCGGCTCTCAGCTATGTTTTGACTTTACTTCTCAGAAGAACCTCATAA

Protein sequence

MVITSTLGTHHIGMICLPQSKEPYHVLQYNTTRFNKSTLFQRLHTRISRRSGHHLYAGRMDFNHAASGRNYQQPSFIDEWPPEPFFLSLIKETFWGLRSLLIFLVEQPSQLKYIEWPSLQSTLKTATLALVLVALLIVALSSVDSALSYVLTLLLRRTS
Homology
[Close]
BLAST of PI0000232 vs. ExPASy TrEMBL
Match: A0A0A0K1C8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G014540 PE=3 SV=1)

HSP 1 Score: 277.7 bits (709), Expect = 3.0e-71
Identity = 145/158 (91.77%), Postives = 150/158 (94.94%), Query Frame = 0 

Query: 1   MVITSTLGTHHIGMICLPQSKEPYHVLQYNTTRFNKSTLFQRLHTRISRRSGHHLYAGRM 60
           MVITSTLGT HIG+ICLPQSKEPYHVLQYNTTR NKS+LFQRLHTRIS+RSGHHLYAGRM
Sbjct: 1   MVITSTLGTPHIGIICLPQSKEPYHVLQYNTTRLNKSSLFQRLHTRISKRSGHHLYAGRM 60

Query: 61  DFNHAASGRNYQQPSFIDEWPPEPFFLSLIKETFWGLRSLLIFLVEQPSQLKYIEWPSLQ 120
            FNHAA  +NYQQPSF DE PPEPFFLSLIKETFWGLRSLLIFLVEQPSQLKYIEWPS Q
Sbjct: 61  GFNHAALEQNYQQPSFNDELPPEPFFLSLIKETFWGLRSLLIFLVEQPSQLKYIEWPSFQ 120

Query: 121 STLKTATLALVLVALLIVALSSVDSALSYVLTLLLRRT 159
           STLKTATLALVLVALLIVALSSVDSALSYVLTL+LRRT
Sbjct: 121 STLKTATLALVLVALLIVALSSVDSALSYVLTLILRRT 158

[Close]
BLAST of PI0000232 vs. ExPASy TrEMBL
Match: A0A1S3BJG9 (uncharacterized protein LOC103490269 OS=Cucumis melo OX=3656 GN=LOC103490269 PE=3 SV=1)

HSP 1 Score: 272.7 bits (696), Expect = 9.7e-70
Identity = 144/159 (90.57%), Postives = 149/159 (93.71%), Query Frame = 0 

Query: 1   MVITSTLGTHHIGMICLPQSKEPYHVLQYNTTRFNKSTLFQRLHTRISRRSGHHLYAGRM 60
           MVITSTLGTHHIG+ICLPQ K  YHVL+YN TR NKS+LFQRLHTRIS+RSG HLYAGRM
Sbjct: 1   MVITSTLGTHHIGIICLPQPK--YHVLRYNATRLNKSSLFQRLHTRISKRSGQHLYAGRM 60

Query: 61  DFNHAASGRNYQQPSFIDEWPPEPFFLSLIKETFWGLRSLLIFLVEQPSQLKYIEWPSLQ 120
            FNHAASG+NYQQPSF DEWP EPFFLSLIKETFWGLRSLLIFLVEQPSQLKYIEWPS Q
Sbjct: 61  GFNHAASGQNYQQPSFNDEWPQEPFFLSLIKETFWGLRSLLIFLVEQPSQLKYIEWPSFQ 120

Query: 121 STLKTATLALVLVALLIVALSSVDSALSYVLTLLLRRTS 160
           STLKTATLALVLVALLIVALSSVDSALSYVLTLLLRRTS
Sbjct: 121 STLKTATLALVLVALLIVALSSVDSALSYVLTLLLRRTS 157

[Close]
BLAST of PI0000232 vs. ExPASy TrEMBL
Match: A0A5A7SIK1 (Protein translocase complex, SecE/Sec61-gamma subunit OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold3037G00250 PE=3 SV=1)

HSP 1 Score: 272.7 bits (696), Expect = 9.7e-70
Identity = 144/159 (90.57%), Postives = 149/159 (93.71%), Query Frame = 0 

Query: 1   MVITSTLGTHHIGMICLPQSKEPYHVLQYNTTRFNKSTLFQRLHTRISRRSGHHLYAGRM 60
           MVITSTLGTHHIG+ICLPQ K  YHVL+YN TR NKS+LFQRLHTRIS+RSG HLYAGRM
Sbjct: 1   MVITSTLGTHHIGIICLPQPK--YHVLRYNATRLNKSSLFQRLHTRISKRSGQHLYAGRM 60

Query: 61  DFNHAASGRNYQQPSFIDEWPPEPFFLSLIKETFWGLRSLLIFLVEQPSQLKYIEWPSLQ 120
            FNHAASG+NYQQPSF DEWP EPFFLSLIKETFWGLRSLLIFLVEQPSQLKYIEWPS Q
Sbjct: 61  GFNHAASGQNYQQPSFNDEWPQEPFFLSLIKETFWGLRSLLIFLVEQPSQLKYIEWPSFQ 120

Query: 121 STLKTATLALVLVALLIVALSSVDSALSYVLTLLLRRTS 160
           STLKTATLALVLVALLIVALSSVDSALSYVLTLLLRRTS
Sbjct: 121 STLKTATLALVLVALLIVALSSVDSALSYVLTLLLRRTS 157

[Close]
BLAST of PI0000232 vs. ExPASy TrEMBL
Match: A0A6J1C3M0 (uncharacterized protein LOC111008049 OS=Momordica charantia OX=3673 GN=LOC111008049 PE=3 SV=1)

HSP 1 Score: 220.3 bits (560), Expect = 5.7e-54
Identity = 119/159 (74.84%), Postives = 131/159 (82.39%), Query Frame = 0 

Query: 1   MVITSTLGTHHIGMICLPQSKEPYHVLQYNTTRFNKSTLFQRLHTRISRRSGHHLYAGRM 60
           M I S LG +HIGMIC P  K+P H+L  NT RFNKS  FQ+L   ISRRSG HLYAGRM
Sbjct: 1   MAIASALGANHIGMICSPHPKQPLHILHINTPRFNKSNDFQKLPKGISRRSG-HLYAGRM 60

Query: 61  DFNHAASGRNYQQPSFIDEWPPEPFFLSLIKETFWGLRSLLIFLVEQPSQLKYIEWPSLQ 120
            FNHAASGR   Q +F +E+PPEPF LSLI+E  WGLRSLLIFLVEQPSQLKYIEWPS Q
Sbjct: 61  SFNHAASGRENHQLNFNEEYPPEPFMLSLIREGIWGLRSLLIFLVEQPSQLKYIEWPSFQ 120

Query: 121 STLKTATLALVLVALLIVALSSVDSALSYVLTLLLRRTS 160
           STLKTATL LVLVALLIVALSSVDSALSY+LTL+LRR++
Sbjct: 121 STLKTATLTLVLVALLIVALSSVDSALSYILTLVLRRST 158

[Close]
BLAST of PI0000232 vs. ExPASy TrEMBL
Match: A0A6J1EK97 (uncharacterized protein LOC111435124 OS=Cucurbita moschata OX=3662 GN=LOC111435124 PE=3 SV=1)

HSP 1 Score: 216.9 bits (551), Expect = 6.3e-53
Identity = 119/159 (74.84%), Postives = 128/159 (80.50%), Query Frame = 0 

Query: 1   MVITSTLGTHHIGMICLPQSKEPYHVLQYNTTRFNKSTLFQRLHTRISRRSGHHLYAGRM 60
           MVI S LG +HIGM  LP S  P+HV +YNT R NK+ +FQ L TRISRR G HLYA RM
Sbjct: 73  MVIASALGANHIGMASLPHSNRPFHV-RYNTARLNKANIFQGLPTRISRRGG-HLYADRM 132

Query: 61  DFNHAASGRNYQQPSFIDEWPPEPFFLSLIKETFWGLRSLLIFLVEQPSQLKYIEWPSLQ 120
            FNHAASGR+ QQ  F DE PPEPFFL +IKET WGLRSL IFL EQPSQLKYIEWPS Q
Sbjct: 133 GFNHAASGRDNQQLRFNDELPPEPFFLGIIKETVWGLRSLFIFLAEQPSQLKYIEWPSFQ 192

Query: 121 STLKTATLALVLVALLIVALSSVDSALSYVLTLLLRRTS 160
           STLKTAT ALVLVALLIVALSSVDS LSY+LT +LRRTS
Sbjct: 193 STLKTATFALVLVALLIVALSSVDSVLSYILTFILRRTS 229

[Close]
BLAST of PI0000232 vs. NCBI nr
Match: XP_004144859.1 (uncharacterized protein LOC101211352 isoform X2 [Cucumis sativus] >KGN43268.1 hypothetical protein Csa_020454 [Cucumis sativus])

HSP 1 Score: 277.7 bits (709), Expect = 6.2e-71
Identity = 145/158 (91.77%), Postives = 150/158 (94.94%), Query Frame = 0 

Query: 1   MVITSTLGTHHIGMICLPQSKEPYHVLQYNTTRFNKSTLFQRLHTRISRRSGHHLYAGRM 60
           MVITSTLGT HIG+ICLPQSKEPYHVLQYNTTR NKS+LFQRLHTRIS+RSGHHLYAGRM
Sbjct: 1   MVITSTLGTPHIGIICLPQSKEPYHVLQYNTTRLNKSSLFQRLHTRISKRSGHHLYAGRM 60

Query: 61  DFNHAASGRNYQQPSFIDEWPPEPFFLSLIKETFWGLRSLLIFLVEQPSQLKYIEWPSLQ 120
            FNHAA  +NYQQPSF DE PPEPFFLSLIKETFWGLRSLLIFLVEQPSQLKYIEWPS Q
Sbjct: 61  GFNHAALEQNYQQPSFNDELPPEPFFLSLIKETFWGLRSLLIFLVEQPSQLKYIEWPSFQ 120

Query: 121 STLKTATLALVLVALLIVALSSVDSALSYVLTLLLRRT 159
           STLKTATLALVLVALLIVALSSVDSALSYVLTL+LRRT
Sbjct: 121 STLKTATLALVLVALLIVALSSVDSALSYVLTLILRRT 158

[Close]
BLAST of PI0000232 vs. NCBI nr
Match: XP_008447932.1 (PREDICTED: uncharacterized protein LOC103490269 [Cucumis melo] >XP_008447935.1 PREDICTED: uncharacterized protein LOC103490269 [Cucumis melo] >KAA0025129.1 Protein translocase complex, SecE/Sec61-gamma subunit [Cucumis melo var. makuwa] >TYK19371.1 Protein translocase complex, SecE/Sec61-gamma subunit [Cucumis melo var. makuwa])

HSP 1 Score: 272.7 bits (696), Expect = 2.0e-69
Identity = 144/159 (90.57%), Postives = 149/159 (93.71%), Query Frame = 0 

Query: 1   MVITSTLGTHHIGMICLPQSKEPYHVLQYNTTRFNKSTLFQRLHTRISRRSGHHLYAGRM 60
           MVITSTLGTHHIG+ICLPQ K  YHVL+YN TR NKS+LFQRLHTRIS+RSG HLYAGRM
Sbjct: 1   MVITSTLGTHHIGIICLPQPK--YHVLRYNATRLNKSSLFQRLHTRISKRSGQHLYAGRM 60

Query: 61  DFNHAASGRNYQQPSFIDEWPPEPFFLSLIKETFWGLRSLLIFLVEQPSQLKYIEWPSLQ 120
            FNHAASG+NYQQPSF DEWP EPFFLSLIKETFWGLRSLLIFLVEQPSQLKYIEWPS Q
Sbjct: 61  GFNHAASGQNYQQPSFNDEWPQEPFFLSLIKETFWGLRSLLIFLVEQPSQLKYIEWPSFQ 120

Query: 121 STLKTATLALVLVALLIVALSSVDSALSYVLTLLLRRTS 160
           STLKTATLALVLVALLIVALSSVDSALSYVLTLLLRRTS
Sbjct: 121 STLKTATLALVLVALLIVALSSVDSALSYVLTLLLRRTS 157

[Close]
BLAST of PI0000232 vs. NCBI nr
Match: XP_038888680.1 (uncharacterized protein LOC120078486 [Benincasa hispida] >XP_038888681.1 uncharacterized protein LOC120078486 [Benincasa hispida] >XP_038888682.1 uncharacterized protein LOC120078486 [Benincasa hispida])

HSP 1 Score: 257.7 bits (657), Expect = 6.6e-65
Identity = 132/159 (83.02%), Postives = 143/159 (89.94%), Query Frame = 0 

Query: 1   MVITSTLGTHHIGMICLPQSKEPYHVLQYNTTRFNKSTLFQRLHTRISRRSGHHLYAGRM 60
           MVI S LG + IG +C+PQSKEP+HVL YNT RFNKST+ QRLHTRIS+R+GHH+YAGRM
Sbjct: 1   MVIASALGANPIGTVCIPQSKEPFHVLHYNTARFNKSTILQRLHTRISKRTGHHVYAGRM 60

Query: 61  DFNHAASGRNYQQPSFIDEWPPEPFFLSLIKETFWGLRSLLIFLVEQPSQLKYIEWPSLQ 120
            FNHAASG++ QQ SF DEWPPEPFFLSLIKET WGLRSLLIFL EQPSQLKYIEWPS Q
Sbjct: 61  GFNHAASGQDNQQLSFNDEWPPEPFFLSLIKETVWGLRSLLIFLAEQPSQLKYIEWPSFQ 120

Query: 121 STLKTATLALVLVALLIVALSSVDSALSYVLTLLLRRTS 160
           STLKTATLALVLVALLIVALSSVDSALSY+LTL LRRTS
Sbjct: 121 STLKTATLALVLVALLIVALSSVDSALSYILTLFLRRTS 159

[Close]
BLAST of PI0000232 vs. NCBI nr
Match: XP_011658604.1 (uncharacterized protein LOC101211352 isoform X3 [Cucumis sativus])

HSP 1 Score: 228.4 bits (581), Expect = 4.3e-56
Identity = 110/125 (88.00%), Postives = 117/125 (93.60%), Query Frame = 0 

Query: 1   MVITSTLGTHHIGMICLPQSKEPYHVLQYNTTRFNKSTLFQRLHTRISRRSGHHLYAGRM 60
           MVITSTLGT HIG+ICLPQSKEPYHVLQYNTTR NKS+LFQRLHTRIS+RSGHHLYAGRM
Sbjct: 1   MVITSTLGTPHIGIICLPQSKEPYHVLQYNTTRLNKSSLFQRLHTRISKRSGHHLYAGRM 60

Query: 61  DFNHAASGRNYQQPSFIDEWPPEPFFLSLIKETFWGLRSLLIFLVEQPSQLKYIEWPSLQ 120
            FNHAA  +NYQQPSF DE PPEPFFLSLIKETFWGLRSLLIFLVEQPSQLKYIEWPS Q
Sbjct: 61  GFNHAALEQNYQQPSFNDELPPEPFFLSLIKETFWGLRSLLIFLVEQPSQLKYIEWPSFQ 120

Query: 121 STLKT 126
           ST+++
Sbjct: 121 STVRS 125

[Close]
BLAST of PI0000232 vs. NCBI nr
Match: XP_031744310.1 (uncharacterized protein LOC101211352 isoform X1 [Cucumis sativus])

HSP 1 Score: 225.3 bits (573), Expect = 3.7e-55
Identity = 115/148 (77.70%), Postives = 125/148 (84.46%), Query Frame = 0 

Query: 1   MVITSTLGTHHIGMICLPQSKEPYHVLQYNTTRFNKSTLFQRLHTRISRRSGHHLYAGRM 60
           MVITSTLGT HIG+ICLPQSKEPYHVLQYNTTR NKS+LFQRLHTRIS+RSGHHLYAGRM
Sbjct: 1   MVITSTLGTPHIGIICLPQSKEPYHVLQYNTTRLNKSSLFQRLHTRISKRSGHHLYAGRM 60

Query: 61  DFNHAASGRNYQQPSFIDEWPPEPFFLSLIKETFWGLRSLLIFLVEQPSQLKYIEWPSLQ 120
            FNHAA  +NYQQPSF DE PPEPFFLSLIKETFWGLRSLLIFLVEQPSQLKYIEWPS Q
Sbjct: 61  GFNHAALEQNYQQPSFNDELPPEPFFLSLIKETFWGLRSLLIFLVEQPSQLKYIEWPSFQ 120

Query: 121 STLKTATLALVLVALLIVALSSVDSALS 149
           ST++     +   A  + + SS D  +S
Sbjct: 121 STVRRQDYYVKYCACALSSCSSEDCHIS 148

[Close]
BLAST of PI0000232 vs. TAIR 10
Match: AT4G38490.1 (unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 95.1 bits (235), Expect = 5.3e-20
Identity = 50/75 (66.67%), Postives = 62/75 (82.67%), Query Frame = 0 

Query: 83  EPFFLSLIKETFWGLRSLLIFLVEQPSQLKYIEWPSLQSTLKTATLALVLVALLIVALSS 142
           EP +LSL+++  W  RSLL F+ EQPSQLKYIEWP+  STLKTATL+L LVA+ IVALSS
Sbjct: 77  EPLWLSLLRDMVWSTRSLLSFMAEQPSQLKYIEWPTFASTLKTATLSLCLVAVFIVALSS 136

Query: 143 VDSALSYVLTLLLRR 158
           VD+AL Y+L L+LR+
Sbjct: 137 VDAALCYILALILRK 151

The following BLAST results are available for this feature:
BLAST of PI0000232 vs.
Match NameE-valueIdentityDescription
BLAST of PI0000232 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K1C83.0e-7191.77Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G014540 PE=3 SV=1[more]
A0A1S3BJG99.7e-7090.57uncharacterized protein LOC103490269 OS=Cucumis melo OX=3656 GN=LOC103490269 PE=... [more]
A0A5A7SIK19.7e-7090.57Protein translocase complex, SecE/Sec61-gamma subunit OS=Cucumis melo var. makuw... [more]
A0A6J1C3M05.7e-5474.84uncharacterized protein LOC111008049 OS=Momordica charantia OX=3673 GN=LOC111008... [more]
A0A6J1EK976.3e-5374.84uncharacterized protein LOC111435124 OS=Cucurbita moschata OX=3662 GN=LOC1114351... [more]
BLAST of PI0000232 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_004144859.16.2e-7191.77uncharacterized protein LOC101211352 isoform X2 [Cucumis sativus] >KGN43268.1 hy... [more]
XP_008447932.12.0e-6990.57PREDICTED: uncharacterized protein LOC103490269 [Cucumis melo] >XP_008447935.1 P... [more]
XP_038888680.16.6e-6583.02uncharacterized protein LOC120078486 [Benincasa hispida] >XP_038888681.1 unchara... [more]
XP_011658604.14.3e-5688.00uncharacterized protein LOC101211352 isoform X3 [Cucumis sativus][more]
XP_031744310.13.7e-5577.70uncharacterized protein LOC101211352 isoform X1 [Cucumis sativus][more]
BLAST of PI0000232 vs. TAIR 10
Match NameE-valueIdentityDescription
AT4G38490.15.3e-2066.67unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae -... [more]
InterPro
Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001901Protein translocase complex, SecE/Sec61-gamma subunitPFAMPF00584SecEcoord: 103..155
e-value: 1.9E-7
score: 30.9
IPR038379SecE superfamilyGENE3D1.20.5.1030Preprotein translocase secy subunitcoord: 98..154
e-value: 4.6E-5
score: 25.1
NoneNo IPR availablePANTHERPTHR37247TRANSMEMBRANE PROTEINcoord: 1..158

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
PI0000232.1PI0000232.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006605 protein targeting
biological_process GO:0071806 protein transmembrane transport
biological_process GO:0090351 seedling development
biological_process GO:0006886 intracellular protein transport
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0009528 plastid inner membrane
cellular_component GO:0016020 membrane