PI0000105 (gene) Melon (PI 482460) v1

Overview


Name	PI0000105
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	Retrotransposon gag protein
Location	chr02: 9853438 .. 9854130 (-)
RNA-Seq Expression	PI0000105
Synteny	PI0000105

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATAGAAATACAGTAGACGCTGCAGCAGAAGGTGCATTAGCTGACAAAACCCCTACTGAGGCGAGAGAGCTCATTTCGAGGATGGCAGAAAATTCACAGAATTCTGGAAATAGGGCATCCGAGCTCAACAATTCATTGACTAAGGAGGTAAGTGAACTTAAATCACAAATGCTTAGTATGACTACTTTACTAACTTCCTTTGTGCAAGGTGGATCTGTTAAAATTGCTAAGTGCGGGGTGTGCGGTCTAGTCGGACATCCTAATGACAAGTGCCCTGACTTAGTGGAAGAGGCAAATGTCATTAGGAAGTACGATCCTCATAGCAATACCTACAATGCCCGTTGGAGAGACAACCCTAATCTAAGATGGGGAAACGACAACCAAAGACCCTCGCAAGCAACCTCTTCTTCAAATAATCAAGGTACAAATTTGGAAGATTTAGTTAAAGCTCTTGCTACTAATACCATCTCTTTTCAAAATGAAATGAAGCAACAAATGTCTCATCTAACCAATGCGATAAGCAAGCTAGAAGGTAAAGGCAAACTTCCGGTTCAGCCTGATCATGCAAATGTAAGTGCCATCTCACTTAGAAGCGGTAAAATTCTGGAAACCCCTTCAAGTGAAGAAAAGGTAACTTCTACCCCTATCCTTCTAGAAAATAATGATGAGAAAAAGGAAGAAAAATTATAA

mRNA sequence

ATGGATAGAAATACAGTAGACGCTGCAGCAGAAGGTGCATTAGCTGACAAAACCCCTACTGAGGCGAGAGAGCTCATTTCGAGGATGGCAGAAAATTCACAGAATTCTGGAAATAGGGCATCCGAGCTCAACAATTCATTGACTAAGGAGGTAAGTGAACTTAAATCACAAATGCTTAGTATGACTACTTTACTAACTTCCTTTGTGCAAGGTGGATCTGTTAAAATTGCTAAGTGCGGGGTGTGCGGTCTAGTCGGACATCCTAATGACAAGTGCCCTGACTTAGTGGAAGAGGCAAATGTCATTAGGAAGTACGATCCTCATAGCAATACCTACAATGCCCGTTGGAGAGACAACCCTAATCTAAGATGGGGAAACGACAACCAAAGACCCTCGCAAGCAACCTCTTCTTCAAATAATCAAGGTACAAATTTGGAAGATTTAGTTAAAGCTCTTGCTACTAATACCATCTCTTTTCAAAATGAAATGAAGCAACAAATGTCTCATCTAACCAATGCGATAAGCAAGCTAGAAGGTAAAGGCAAACTTCCGGTTCAGCCTGATCATGCAAATGTAAGTGCCATCTCACTTAGAAGCGGTAAAATTCTGGAAACCCCTTCAAGTGAAGAAAAGGTAACTTCTACCCCTATCCTTCTAGAAAATAATGATGAGAAAAAGGAAGAAAAATTATAA

Coding sequence (CDS)

ATGGATAGAAATACAGTAGACGCTGCAGCAGAAGGTGCATTAGCTGACAAAACCCCTACTGAGGCGAGAGAGCTCATTTCGAGGATGGCAGAAAATTCACAGAATTCTGGAAATAGGGCATCCGAGCTCAACAATTCATTGACTAAGGAGGTAAGTGAACTTAAATCACAAATGCTTAGTATGACTACTTTACTAACTTCCTTTGTGCAAGGTGGATCTGTTAAAATTGCTAAGTGCGGGGTGTGCGGTCTAGTCGGACATCCTAATGACAAGTGCCCTGACTTAGTGGAAGAGGCAAATGTCATTAGGAAGTACGATCCTCATAGCAATACCTACAATGCCCGTTGGAGAGACAACCCTAATCTAAGATGGGGAAACGACAACCAAAGACCCTCGCAAGCAACCTCTTCTTCAAATAATCAAGGTACAAATTTGGAAGATTTAGTTAAAGCTCTTGCTACTAATACCATCTCTTTTCAAAATGAAATGAAGCAACAAATGTCTCATCTAACCAATGCGATAAGCAAGCTAGAAGGTAAAGGCAAACTTCCGGTTCAGCCTGATCATGCAAATGTAAGTGCCATCTCACTTAGAAGCGGTAAAATTCTGGAAACCCCTTCAAGTGAAGAAAAGGTAACTTCTACCCCTATCCTTCTAGAAAATAATGATGAGAAAAAGGAAGAAAAATTATAA

Protein sequence

MDRNTVDAAAEGALADKTPTEARELISRMAENSQNSGNRASELNNSLTKEVSELKSQMLSMTTLLTSFVQGGSVKIAKCGVCGLVGHPNDKCPDLVEEANVIRKYDPHSNTYNARWRDNPNLRWGNDNQRPSQATSSSNNQGTNLEDLVKALATNTISFQNEMKQQMSHLTNAISKLEGKGKLPVQPDHANVSAISLRSGKILETPSSEEKVTSTPILLENNDEKKEEKL

Homology

[Close]

BLAST of PI0000105 vs. ExPASy TrEMBL
Match: A0A5D3CB46 (Retrotransposon gag protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold544G00170 PE=4 SV=1)

HSP 1 Score: 339.0 bits (868), Expect = 1.6e-89
Identity = 173/229 (75.55%), Postives = 206/229 (89.96%), Query Frame = 0


Query: 3   RNTVDAAAEGALADKTPTEARELISRMAENSQNSGNRASELNNSLTKEVSELKSQMLSMT 62
           RNT+D AA GALADKTPTEARELISRMAENS++ GNRASEL+NSLTKEVSELKSQML+MT
Sbjct: 48  RNTLDVAAGGALADKTPTEARELISRMAENSESFGNRASELDNSLTKEVSELKSQMLNMT 107

Query: 63  TLLTSFVQGGSVKIAKCGVCGLVGHPNDKCPDLVEEANVIRKYDPHSNTYNARWRDNPNL 122
           TLLTSFVQG   K+ KCGVCGLVGHPNDKCP ++E+ N++R+YDPHSNTYN+ WRDN NL
Sbjct: 108 TLLTSFVQGTPPKVTKCGVCGLVGHPNDKCPKVIEDVNIVRRYDPHSNTYNSGWRDNLNL 167

Query: 123 RWGNDNQRPSQATSSSNNQGTNLEDLVKALATNTISFQNEMKQQMSHLTNAISKLEGKGK 182
           RWGNDNQ+ +QA S+S+NQGTNLED++KALATNT+SFQ +MKQQM+ LT AISK++GKGK
Sbjct: 168 RWGNDNQKYTQAPSTSSNQGTNLEDIIKALATNTLSFQQKMKQQMTQLTTAISKMDGKGK 227

Query: 183 LPVQPDHANVSAISLRSGKILETPSS-EEKVTSTPILLENNDEKKEEKL 231
           LP QPDHANVSAISLRSGKIL+TP++ E+K+TS P+ L + +E KEEK+
Sbjct: 228 LPAQPDHANVSAISLRSGKILDTPTTKEKKLTSKPLPLNSKNESKEEKV 276

[Close]

BLAST of PI0000105 vs. ExPASy TrEMBL
Match: A0A5D3CRR8 (Retrotransposon gag protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold363G00610 PE=4 SV=1)

HSP 1 Score: 332.8 bits (852), Expect = 1.1e-87
Identity = 170/230 (73.91%), Postives = 203/230 (88.26%), Query Frame = 0


Query: 2   DRNTVDAAAEGALADKTPTEARELISRMAENSQNSGNRASELNNSLTKEVSELKSQMLSM 61
           DRNTVDA A GALADK PTEARELIS+MAENSQ+  NRASEL+NSLTKEVSELKSQML+M
Sbjct: 83  DRNTVDAVAGGALADKAPTEARELISKMAENSQSFENRASELDNSLTKEVSELKSQMLNM 142

Query: 62  TTLLTSFVQGGSVKIAKCGVCGLVGHPNDKCPDLVEEANVIRKYDPHSNTYNARWRDNPN 121
           TTLLTSFVQG  +K+ KCGVCGLVGHPNDKCP+++E+ N++RKYDPH NTYN+ WRDNPN
Sbjct: 143 TTLLTSFVQGTPLKVTKCGVCGLVGHPNDKCPEVIEDVNIVRKYDPHGNTYNSGWRDNPN 202

Query: 122 LRWGNDNQRPSQATSSSNNQGTNLEDLVKALATNTISFQNEMKQQMSHLTNAISKLEGKG 181
           LRWGNDNQ+ +QA S+S+NQGTNLED++KALATNT+SFQ EMKQQM+ LT AISK++GKG
Sbjct: 203 LRWGNDNQKHTQAPSTSSNQGTNLEDIIKALATNTLSFQQEMKQQMTQLTTAISKMDGKG 262

Query: 182 KLPVQPDHANVSAISLRSGKILETPSS-EEKVTSTPILLENNDEKKEEKL 231
           KL  Q ++ANVSA+SLRSGKIL+TP++ E+K TS P+ L   +E KEEK+
Sbjct: 263 KLSAQSNYANVSAVSLRSGKILDTPTTKEKKATSKPLPLNTKNECKEEKI 312

[Close]

BLAST of PI0000105 vs. ExPASy TrEMBL
Match: A0A5A7V0Q7 (Retrotransposon gag protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold753G00020 PE=4 SV=1)

HSP 1 Score: 330.9 bits (847), Expect = 4.3e-87
Identity = 165/215 (76.74%), Postives = 192/215 (89.30%), Query Frame = 0


Query: 2   DRNTVDAAAEGALADKTPTEARELISRMAENSQNSGNRASELNNSLTKEVSELKSQMLSM 61
           DRNT+D  A GALADKTPTEARELISRM ENSQ+ GNRASEL+NSLTKEVSELKSQML+M
Sbjct: 110 DRNTIDVVAGGALADKTPTEARELISRMVENSQSFGNRASELDNSLTKEVSELKSQMLNM 169

Query: 62  TTLLTSFVQGGSVKIAKCGVCGLVGHPNDKCPDLVEEANVIRKYDPHSNTYNARWRDNPN 121
           TTLLTSFVQG   K+ KCGVCGLVGHPNDKC  ++E+ N++R+YDPHSNTYN+ WRDNPN
Sbjct: 170 TTLLTSFVQGTPPKVTKCGVCGLVGHPNDKCLKVIEDVNIVRRYDPHSNTYNSGWRDNPN 229

Query: 122 LRWGNDNQRPSQATSSSNNQGTNLEDLVKALATNTISFQNEMKQQMSHLTNAISKLEGKG 181
           LRWGNDNQ+ +QA S+S+NQGTNLED++KAL TNT+SFQ EMKQQM+ LT AISK++GKG
Sbjct: 230 LRWGNDNQKHTQAPSTSSNQGTNLEDIIKALGTNTLSFQQEMKQQMTQLTTAISKMDGKG 289

Query: 182 KLPVQPDHANVSAISLRSGKILETPSSEEKVTSTP 217
           KLP QPD+ANVSAISLRSGKIL+TP+++EK   TP
Sbjct: 290 KLPAQPDYANVSAISLRSGKILDTPTTKEKKKETP 324

[Close]

BLAST of PI0000105 vs. ExPASy TrEMBL
Match: A0A5A7SRF5 (Retrotransposon gag protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold96G00500 PE=4 SV=1)

HSP 1 Score: 330.5 bits (846), Expect = 5.6e-87
Identity = 170/230 (73.91%), Postives = 202/230 (87.83%), Query Frame = 0


Query: 2   DRNTVDAAAEGALADKTPTEARELISRMAENSQNSGNRASELNNSLTKEVSELKSQMLSM 61
           DRNTVDAAA GALA+K PTEARELISRMA+NSQ  GNRASEL NSLTKEVSELKSQML+M
Sbjct: 237 DRNTVDAAAGGALANKIPTEARELISRMAKNSQRFGNRASELENSLTKEVSELKSQMLNM 296

Query: 62  TTLLTSFVQGGSVKIAKCGVCGLVGHPNDKCPDLVEEANVIRKYDPHSNTYNARWRDNPN 121
           TTLLTSFVQG  +K+ KC VCGLVGHPNDKCP+++EE N+++KYDP+SNTYN  WRDNP 
Sbjct: 297 TTLLTSFVQGTPLKVTKCRVCGLVGHPNDKCPEVIEELNIVKKYDPYSNTYNTGWRDNPI 356

Query: 122 LRWGNDNQRPSQATSSSNNQGTNLEDLVKALATNTISFQNEMKQQMSHLTNAISKLEGKG 181
           LRWGNDNQ+ +QA ++S+NQ TNL+D++KALATNT+SFQ EMKQQM+ LT  ISK++GKG
Sbjct: 357 LRWGNDNQKHTQAPTTSSNQSTNLKDIIKALATNTLSFQQEMKQQMTQLTTTISKMDGKG 416

Query: 182 KLPVQPDHANVSAISLRSGKILETPSS-EEKVTSTPILLENNDEKKEEKL 231
           KLP QP+HANVS ISLRSGKIL+TPS+ E+KVTS P+ L + +E KEEK+
Sbjct: 417 KLPAQPNHANVSVISLRSGKILDTPSTKEKKVTSIPLPLNSKNESKEEKV 466

[Close]

BLAST of PI0000105 vs. ExPASy TrEMBL
Match: A0A5A7SQH8 (Retrotransposon gag protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold575G00200 PE=4 SV=1)

HSP 1 Score: 327.0 bits (837), Expect = 6.2e-86
Identity = 169/230 (73.48%), Postives = 200/230 (86.96%), Query Frame = 0


Query: 2   DRNTVDAAAEGALADKTPTEARELISRMAENSQNSGNRASELNNSLTKEVSELKSQMLSM 61
           DRN VDAAA GALADKTP EARELI RMAENSQN GNRASEL+NSLTKEVSELKSQML+M
Sbjct: 106 DRNKVDAAARGALADKTPIEARELILRMAENSQNFGNRASELDNSLTKEVSELKSQMLNM 165

Query: 62  TTLLTSFVQGGSVKIAKCGVCGLVGHPNDKCPDLVEEANVIRKYDPHSNTYNARWRDNPN 121
           TTLLTSFVQG  +K+ KCGVCGLVG+PNDKCP ++E+ N++R+YDPH NTYN  WRDNPN
Sbjct: 166 TTLLTSFVQGTPLKVTKCGVCGLVGYPNDKCPKVIEDVNIVRRYDPHGNTYNLGWRDNPN 225

Query: 122 LRWGNDNQRPSQATSSSNNQGTNLEDLVKALATNTISFQNEMKQQMSHLTNAISKLEGKG 181
           LRWGNDNQ+ +QA  +S+NQGTNLED++ ALATNT+SFQ EMKQQM+ LT  +SK++GKG
Sbjct: 226 LRWGNDNQKHTQAPPTSSNQGTNLEDII-ALATNTLSFQQEMKQQMTQLTTVLSKMDGKG 285

Query: 182 KLPVQPDHANVSAISLRSGKILETPSS-EEKVTSTPILLENNDEKKEEKL 231
           KLP QPDH NVSAISLRSGKIL+TP++ E+KVTS  + L + ++ KEEK+
Sbjct: 286 KLPAQPDHVNVSAISLRSGKILDTPTTKEKKVTSKLLPLNSKNQSKEEKV 334

[Close]

BLAST of PI0000105 vs. NCBI nr
Match: TYK07549.1 (retrotransposon gag protein [Cucumis melo var. makuwa])

HSP 1 Score: 339.0 bits (868), Expect = 3.3e-89
Identity = 173/229 (75.55%), Postives = 206/229 (89.96%), Query Frame = 0


Query: 3   RNTVDAAAEGALADKTPTEARELISRMAENSQNSGNRASELNNSLTKEVSELKSQMLSMT 62
           RNT+D AA GALADKTPTEARELISRMAENS++ GNRASEL+NSLTKEVSELKSQML+MT
Sbjct: 48  RNTLDVAAGGALADKTPTEARELISRMAENSESFGNRASELDNSLTKEVSELKSQMLNMT 107

Query: 63  TLLTSFVQGGSVKIAKCGVCGLVGHPNDKCPDLVEEANVIRKYDPHSNTYNARWRDNPNL 122
           TLLTSFVQG   K+ KCGVCGLVGHPNDKCP ++E+ N++R+YDPHSNTYN+ WRDN NL
Sbjct: 108 TLLTSFVQGTPPKVTKCGVCGLVGHPNDKCPKVIEDVNIVRRYDPHSNTYNSGWRDNLNL 167

Query: 123 RWGNDNQRPSQATSSSNNQGTNLEDLVKALATNTISFQNEMKQQMSHLTNAISKLEGKGK 182
           RWGNDNQ+ +QA S+S+NQGTNLED++KALATNT+SFQ +MKQQM+ LT AISK++GKGK
Sbjct: 168 RWGNDNQKYTQAPSTSSNQGTNLEDIIKALATNTLSFQQKMKQQMTQLTTAISKMDGKGK 227

Query: 183 LPVQPDHANVSAISLRSGKILETPSS-EEKVTSTPILLENNDEKKEEKL 231
           LP QPDHANVSAISLRSGKIL+TP++ E+K+TS P+ L + +E KEEK+
Sbjct: 228 LPAQPDHANVSAISLRSGKILDTPTTKEKKLTSKPLPLNSKNESKEEKV 276

[Close]

BLAST of PI0000105 vs. NCBI nr
Match: KAA0047407.1 (retrotransposon gag protein [Cucumis melo var. makuwa] >TYK14082.1 retrotransposon gag protein [Cucumis melo var. makuwa])

HSP 1 Score: 332.8 bits (852), Expect = 2.4e-87
Identity = 170/230 (73.91%), Postives = 203/230 (88.26%), Query Frame = 0


Query: 2   DRNTVDAAAEGALADKTPTEARELISRMAENSQNSGNRASELNNSLTKEVSELKSQMLSM 61
           DRNTVDA A GALADK PTEARELIS+MAENSQ+  NRASEL+NSLTKEVSELKSQML+M
Sbjct: 83  DRNTVDAVAGGALADKAPTEARELISKMAENSQSFENRASELDNSLTKEVSELKSQMLNM 142

Query: 62  TTLLTSFVQGGSVKIAKCGVCGLVGHPNDKCPDLVEEANVIRKYDPHSNTYNARWRDNPN 121
           TTLLTSFVQG  +K+ KCGVCGLVGHPNDKCP+++E+ N++RKYDPH NTYN+ WRDNPN
Sbjct: 143 TTLLTSFVQGTPLKVTKCGVCGLVGHPNDKCPEVIEDVNIVRKYDPHGNTYNSGWRDNPN 202

Query: 122 LRWGNDNQRPSQATSSSNNQGTNLEDLVKALATNTISFQNEMKQQMSHLTNAISKLEGKG 181
           LRWGNDNQ+ +QA S+S+NQGTNLED++KALATNT+SFQ EMKQQM+ LT AISK++GKG
Sbjct: 203 LRWGNDNQKHTQAPSTSSNQGTNLEDIIKALATNTLSFQQEMKQQMTQLTTAISKMDGKG 262

Query: 182 KLPVQPDHANVSAISLRSGKILETPSS-EEKVTSTPILLENNDEKKEEKL 231
           KL  Q ++ANVSA+SLRSGKIL+TP++ E+K TS P+ L   +E KEEK+
Sbjct: 263 KLSAQSNYANVSAVSLRSGKILDTPTTKEKKATSKPLPLNTKNECKEEKI 312

[Close]

BLAST of PI0000105 vs. NCBI nr
Match: KAA0061138.1 (retrotransposon gag protein [Cucumis melo var. makuwa])

HSP 1 Score: 330.9 bits (847), Expect = 8.9e-87
Identity = 165/215 (76.74%), Postives = 192/215 (89.30%), Query Frame = 0


Query: 2   DRNTVDAAAEGALADKTPTEARELISRMAENSQNSGNRASELNNSLTKEVSELKSQMLSM 61
           DRNT+D  A GALADKTPTEARELISRM ENSQ+ GNRASEL+NSLTKEVSELKSQML+M
Sbjct: 110 DRNTIDVVAGGALADKTPTEARELISRMVENSQSFGNRASELDNSLTKEVSELKSQMLNM 169

Query: 62  TTLLTSFVQGGSVKIAKCGVCGLVGHPNDKCPDLVEEANVIRKYDPHSNTYNARWRDNPN 121
           TTLLTSFVQG   K+ KCGVCGLVGHPNDKC  ++E+ N++R+YDPHSNTYN+ WRDNPN
Sbjct: 170 TTLLTSFVQGTPPKVTKCGVCGLVGHPNDKCLKVIEDVNIVRRYDPHSNTYNSGWRDNPN 229

Query: 122 LRWGNDNQRPSQATSSSNNQGTNLEDLVKALATNTISFQNEMKQQMSHLTNAISKLEGKG 181
           LRWGNDNQ+ +QA S+S+NQGTNLED++KAL TNT+SFQ EMKQQM+ LT AISK++GKG
Sbjct: 230 LRWGNDNQKHTQAPSTSSNQGTNLEDIIKALGTNTLSFQQEMKQQMTQLTTAISKMDGKG 289

Query: 182 KLPVQPDHANVSAISLRSGKILETPSSEEKVTSTP 217
           KLP QPD+ANVSAISLRSGKIL+TP+++EK   TP
Sbjct: 290 KLPAQPDYANVSAISLRSGKILDTPTTKEKKKETP 324

[Close]

BLAST of PI0000105 vs. NCBI nr
Match: KAA0031967.1 (retrotransposon gag protein [Cucumis melo var. makuwa] >TYK16787.1 retrotransposon gag protein [Cucumis melo var. makuwa])

HSP 1 Score: 330.5 bits (846), Expect = 1.2e-86
Identity = 170/230 (73.91%), Postives = 202/230 (87.83%), Query Frame = 0


Query: 2   DRNTVDAAAEGALADKTPTEARELISRMAENSQNSGNRASELNNSLTKEVSELKSQMLSM 61
           DRNTVDAAA GALA+K PTEARELISRMA+NSQ  GNRASEL NSLTKEVSELKSQML+M
Sbjct: 237 DRNTVDAAAGGALANKIPTEARELISRMAKNSQRFGNRASELENSLTKEVSELKSQMLNM 296

Query: 62  TTLLTSFVQGGSVKIAKCGVCGLVGHPNDKCPDLVEEANVIRKYDPHSNTYNARWRDNPN 121
           TTLLTSFVQG  +K+ KC VCGLVGHPNDKCP+++EE N+++KYDP+SNTYN  WRDNP 
Sbjct: 297 TTLLTSFVQGTPLKVTKCRVCGLVGHPNDKCPEVIEELNIVKKYDPYSNTYNTGWRDNPI 356

Query: 122 LRWGNDNQRPSQATSSSNNQGTNLEDLVKALATNTISFQNEMKQQMSHLTNAISKLEGKG 181
           LRWGNDNQ+ +QA ++S+NQ TNL+D++KALATNT+SFQ EMKQQM+ LT  ISK++GKG
Sbjct: 357 LRWGNDNQKHTQAPTTSSNQSTNLKDIIKALATNTLSFQQEMKQQMTQLTTTISKMDGKG 416

Query: 182 KLPVQPDHANVSAISLRSGKILETPSS-EEKVTSTPILLENNDEKKEEKL 231
           KLP QP+HANVS ISLRSGKIL+TPS+ E+KVTS P+ L + +E KEEK+
Sbjct: 417 KLPAQPNHANVSVISLRSGKILDTPSTKEKKVTSIPLPLNSKNESKEEKV 466

[Close]

BLAST of PI0000105 vs. NCBI nr
Match: KAA0032798.1 (retrotransposon gag protein [Cucumis melo var. makuwa] >TYK30356.1 retrotransposon gag protein [Cucumis melo var. makuwa])

HSP 1 Score: 327.0 bits (837), Expect = 1.3e-85
Identity = 169/230 (73.48%), Postives = 200/230 (86.96%), Query Frame = 0


Query: 2   DRNTVDAAAEGALADKTPTEARELISRMAENSQNSGNRASELNNSLTKEVSELKSQMLSM 61
           DRN VDAAA GALADKTP EARELI RMAENSQN GNRASEL+NSLTKEVSELKSQML+M
Sbjct: 106 DRNKVDAAARGALADKTPIEARELILRMAENSQNFGNRASELDNSLTKEVSELKSQMLNM 165

Query: 62  TTLLTSFVQGGSVKIAKCGVCGLVGHPNDKCPDLVEEANVIRKYDPHSNTYNARWRDNPN 121
           TTLLTSFVQG  +K+ KCGVCGLVG+PNDKCP ++E+ N++R+YDPH NTYN  WRDNPN
Sbjct: 166 TTLLTSFVQGTPLKVTKCGVCGLVGYPNDKCPKVIEDVNIVRRYDPHGNTYNLGWRDNPN 225

Query: 122 LRWGNDNQRPSQATSSSNNQGTNLEDLVKALATNTISFQNEMKQQMSHLTNAISKLEGKG 181
           LRWGNDNQ+ +QA  +S+NQGTNLED++ ALATNT+SFQ EMKQQM+ LT  +SK++GKG
Sbjct: 226 LRWGNDNQKHTQAPPTSSNQGTNLEDII-ALATNTLSFQQEMKQQMTQLTTVLSKMDGKG 285

Query: 182 KLPVQPDHANVSAISLRSGKILETPSS-EEKVTSTPILLENNDEKKEEKL 231
           KLP QPDH NVSAISLRSGKIL+TP++ E+KVTS  + L + ++ KEEK+
Sbjct: 286 KLPAQPDHVNVSAISLRSGKILDTPTTKEKKVTSKLLPLNSKNQSKEEKV 334

The following BLAST results are available for this feature:

BLAST of PI0000105 vs.


Match Name	E-value	Identity	Description

BLAST of PI0000105 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3CB46	1.6e-89	75.55	Retrotransposon gag protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaf...	[more]
A0A5D3CRR8	1.1e-87	73.91	Retrotransposon gag protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaf...	[more]
A0A5A7V0Q7	4.3e-87	76.74	Retrotransposon gag protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaf...	[more]
A0A5A7SRF5	5.6e-87	73.91	Retrotransposon gag protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaf...	[more]
A0A5A7SQH8	6.2e-86	73.48	Retrotransposon gag protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaf...	[more]

BLAST of PI0000105 vs. NCBI nr


Match Name	E-value	Identity	Description
TYK07549.1	3.3e-89	75.55	retrotransposon gag protein [Cucumis melo var. makuwa]	[more]
KAA0047407.1	2.4e-87	73.91	retrotransposon gag protein [Cucumis melo var. makuwa] >TYK14082.1 retrotranspos...	[more]
KAA0061138.1	8.9e-87	76.74	retrotransposon gag protein [Cucumis melo var. makuwa]	[more]
KAA0031967.1	1.2e-86	73.91	retrotransposon gag protein [Cucumis melo var. makuwa] >TYK16787.1 retrotranspos...	[more]
KAA0032798.1	1.3e-85	73.48	retrotransposon gag protein [Cucumis melo var. makuwa] >TYK30356.1 retrotranspos...	[more]

BLAST of PI0000105 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 160..180
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 203..219
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 203..230
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 109..143
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..21
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 112..143
None	No IPR available	PANTHER	PTHR24559	TRANSPOSON TY3-I GAG-POL POLYPROTEIN	coord: 1..133
None	No IPR available	PANTHER	PTHR24559:SF334	SUBFAMILY NOT NAMED	coord: 1..133

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0000105.1	PI0000105.1	mRNA