PI0000100 (gene) Melon (PI 482460) v1

Overview
NamePI0000100
Typegene
OrganismCucumis metuliferus (Melon (PI 482460) v1)
DescriptionDrebrin-like
Locationchr02: 12738952 .. 12739230 (+)
RNA-Seq ExpressionPI0000100
SyntenyPI0000100
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCCATCACGCCACGACAGCACTATCGCCTTGGACAAAGCGATGCTCCTTTATTGCATTATGGAGGAGCTACCAATCAATCTCGGCGAGATAGTTTGTCAGCAAATCCATGCGTTCGTGAGGCATCCACGCGGTGCAACGCCTTTTCCATACCTCATTGAGCAACTCTGTTTGAAGGTCGTGCCCGCGTTGAAGACTTTCCCAGCAATCCCTATCAAAGATGGCTTGTGTTCCATCACAAGCCTTAAACGCATCATCAATCTCCACAAGAACAATTGA

mRNA sequence

ATGCCATCACGCCACGACAGCACTATCGCCTTGGACAAAGCGATGCTCCTTTATTGCATTATGGAGGAGCTACCAATCAATCTCGGCGAGATAGTTTGTCAGCAAATCCATGCGTTCGTGAGGCATCCACGCGGTGCAACGCCTTTTCCATACCTCATTGAGCAACTCTGTTTGAAGGTCGTGCCCGCGTTGAAGACTTTCCCAGCAATCCCTATCAAAGATGGCTTGTGTTCCATCACAAGCCTTAAACGCATCATCAATCTCCACAAGAACAATTGA

Coding sequence (CDS)

ATGCCATCACGCCACGACAGCACTATCGCCTTGGACAAAGCGATGCTCCTTTATTGCATTATGGAGGAGCTACCAATCAATCTCGGCGAGATAGTTTGTCAGCAAATCCATGCGTTCGTGAGGCATCCACGCGGTGCAACGCCTTTTCCATACCTCATTGAGCAACTCTGTTTGAAGGTCGTGCCCGCGTTGAAGACTTTCCCAGCAATCCCTATCAAAGATGGCTTGTGTTCCATCACAAGCCTTAAACGCATCATCAATCTCCACAAGAACAATTGA

Protein sequence

MPSRHDSTIALDKAMLLYCIMEELPINLGEIVCQQIHAFVRHPRGATPFPYLIEQLCLKVVPALKTFPAIPIKDGLCSITSLKRIINLHKNN
Homology
[Close]
BLAST of PI0000100 vs. ExPASy TrEMBL
Match: A0A5A7SRQ1 (Drebrin-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold156G00660 PE=4 SV=1)

HSP 1 Score: 119.0 bits (297), Expect = 1.0e-23
Identity = 49/91 (53.85%), Postives = 74/91 (81.32%), Query Frame = 0 

Query: 1  MPSRHDSTIALDKAMLLYCIMEELPINLGEIVCQQIHAFVRHPRGATPFPYLIEQLCLKV 60
          MP+RHD+TI++DK +L+YCIMEELP+N+GEI+C+ I A+V+HP+G+ PFP+LIE+LCLK 
Sbjct: 1  MPTRHDNTISMDKIVLIYCIMEELPVNVGEIICEHIFAWVKHPQGSRPFPHLIEKLCLKA 60

Query: 61 VPALKTFPAIPIKDGLCSITSLKRIINLHKN 92
           P+L+  P + +KD + + ++L   I +HKN
Sbjct: 61 CPSLEKLPQVEVKDRVYTASTLYCFIAIHKN 91

[Close]
BLAST of PI0000100 vs. ExPASy TrEMBL
Match: A0A5A7VJ48 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold21G004490 PE=4 SV=1)

HSP 1 Score: 110.2 bits (274), Expect = 4.8e-21
Identity = 48/91 (52.75%), Postives = 68/91 (74.73%), Query Frame = 0 

Query: 1   MPSRHDSTIALDKAMLLYCIMEELPINLGEIVCQQIHAFVRHPRGATPFPYLIEQLCLKV 60
           M +R +S +++D+ ML+YCIMEEL +NLGEI+C+ I   V+HP GA  FP+LIE+LCLK 
Sbjct: 98  MRTRQESIVSMDRMMLIYCIMEELQVNLGEIICEHILECVKHPYGARSFPHLIEKLCLKT 157

Query: 61  VPALKTFPAIPIKDGLCSITSLKRIINLHKN 92
             AL+  P + +KDG+C+  +L RII +HKN
Sbjct: 158 CLALEKLPQVEVKDGMCTTITLPRIIAIHKN 188

[Close]
BLAST of PI0000100 vs. ExPASy TrEMBL
Match: A0A5D3BPB1 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold602G00710 PE=4 SV=1)

HSP 1 Score: 110.2 bits (274), Expect = 4.8e-21
Identity = 48/91 (52.75%), Postives = 68/91 (74.73%), Query Frame = 0 

Query: 1  MPSRHDSTIALDKAMLLYCIMEELPINLGEIVCQQIHAFVRHPRGATPFPYLIEQLCLKV 60
          M +R +S +++D+ ML+YCIMEEL +NLGEI+C+ I   V+HP GA  FP+LIE+LCLK 
Sbjct: 1  MRTRQESIVSMDRMMLIYCIMEELQVNLGEIICEHILECVKHPYGARSFPHLIEKLCLKT 60

Query: 61 VPALKTFPAIPIKDGLCSITSLKRIINLHKN 92
            AL+  P + +KDG+C+  +L RII +HKN
Sbjct: 61 CLALEKLPQVEVKDGMCTTITLPRIIAIHKN 91

[Close]
BLAST of PI0000100 vs. ExPASy TrEMBL
Match: A0A0A0LAN0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G263250 PE=4 SV=1)

HSP 1 Score: 104.8 bits (260), Expect = 2.0e-19
Identity = 46/91 (50.55%), Postives = 68/91 (74.73%), Query Frame = 0 

Query: 1   MPSRHDSTIALDKAMLLYCIMEELPINLGEIVCQQIHAFVRHPRGATPFPYLIEQLCLKV 60
           MP+RH STI++++ ML+YCIM+++ +N+G+I+   I A V+HPRGA PF YLIEQLCL+ 
Sbjct: 38  MPTRHVSTISMERVMLVYCIMKKILVNIGKIISNHIIALVKHPRGARPFSYLIEQLCLRA 97

Query: 61  VPALKTFPAIPIKDGLCSITSLKRIINLHKN 92
              L+  P + +KDG+   ++L RII +HKN
Sbjct: 98  CLMLEKLPQVEVKDGIWLPSTLHRIIAIHKN 128

[Close]
BLAST of PI0000100 vs. ExPASy TrEMBL
Match: A0A5D3DVQ6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1142G00370 PE=4 SV=1)

HSP 1 Score: 101.3 bits (251), Expect = 2.2e-18
Identity = 44/82 (53.66%), Postives = 64/82 (78.05%), Query Frame = 0 

Query: 1   MPSRHDSTIALDKAMLLYCIMEELPINLGEIVCQQIHAFVRHPRGATPFPYLIEQLCLKV 60
           MP+RHD+TI+ ++ MLLYCIMEE+P+++ EI+C  I A+V+HPRGA PFP+LIE+LCL+ 
Sbjct: 211 MPTRHDNTISFERIMLLYCIMEEIPVDVDEIICDHIKAWVQHPRGAKPFPHLIERLCLRS 270

Query: 61  VPALKTFPAIP-IKDGLCSITS 82
              L+  P I  ++DG+C+  S
Sbjct: 271 CSELEQSPQIACVQDGMCNTKS 292

[Close]
BLAST of PI0000100 vs. NCBI nr
Match: KAA0032726.1 (drebrin-like [Cucumis melo var. makuwa] >TYJ98758.1 drebrin-like [Cucumis melo var. makuwa])

HSP 1 Score: 119.0 bits (297), Expect = 2.1e-23
Identity = 49/91 (53.85%), Postives = 74/91 (81.32%), Query Frame = 0 

Query: 1  MPSRHDSTIALDKAMLLYCIMEELPINLGEIVCQQIHAFVRHPRGATPFPYLIEQLCLKV 60
          MP+RHD+TI++DK +L+YCIMEELP+N+GEI+C+ I A+V+HP+G+ PFP+LIE+LCLK 
Sbjct: 1  MPTRHDNTISMDKIVLIYCIMEELPVNVGEIICEHIFAWVKHPQGSRPFPHLIEKLCLKA 60

Query: 61 VPALKTFPAIPIKDGLCSITSLKRIINLHKN 92
           P+L+  P + +KD + + ++L   I +HKN
Sbjct: 61 CPSLEKLPQVEVKDRVYTASTLYCFIAIHKN 91

[Close]
BLAST of PI0000100 vs. NCBI nr
Match: KAA0066376.1 (hypothetical protein E6C27_scaffold21G004490 [Cucumis melo var. makuwa])

HSP 1 Score: 110.2 bits (274), Expect = 9.9e-21
Identity = 48/91 (52.75%), Postives = 68/91 (74.73%), Query Frame = 0 

Query: 1   MPSRHDSTIALDKAMLLYCIMEELPINLGEIVCQQIHAFVRHPRGATPFPYLIEQLCLKV 60
           M +R +S +++D+ ML+YCIMEEL +NLGEI+C+ I   V+HP GA  FP+LIE+LCLK 
Sbjct: 98  MRTRQESIVSMDRMMLIYCIMEELQVNLGEIICEHILECVKHPYGARSFPHLIEKLCLKT 157

Query: 61  VPALKTFPAIPIKDGLCSITSLKRIINLHKN 92
             AL+  P + +KDG+C+  +L RII +HKN
Sbjct: 158 CLALEKLPQVEVKDGMCTTITLPRIIAIHKN 188

[Close]
BLAST of PI0000100 vs. NCBI nr
Match: TYK00908.1 (hypothetical protein E5676_scaffold602G00710 [Cucumis melo var. makuwa])

HSP 1 Score: 110.2 bits (274), Expect = 9.9e-21
Identity = 48/91 (52.75%), Postives = 68/91 (74.73%), Query Frame = 0 

Query: 1  MPSRHDSTIALDKAMLLYCIMEELPINLGEIVCQQIHAFVRHPRGATPFPYLIEQLCLKV 60
          M +R +S +++D+ ML+YCIMEEL +NLGEI+C+ I   V+HP GA  FP+LIE+LCLK 
Sbjct: 1  MRTRQESIVSMDRMMLIYCIMEELQVNLGEIICEHILECVKHPYGARSFPHLIEKLCLKT 60

Query: 61 VPALKTFPAIPIKDGLCSITSLKRIINLHKN 92
            AL+  P + +KDG+C+  +L RII +HKN
Sbjct: 61 CLALEKLPQVEVKDGMCTTITLPRIIAIHKN 91

[Close]
BLAST of PI0000100 vs. NCBI nr
Match: KGN57727.1 (hypothetical protein Csa_009739 [Cucumis sativus])

HSP 1 Score: 104.8 bits (260), Expect = 4.2e-19
Identity = 46/91 (50.55%), Postives = 68/91 (74.73%), Query Frame = 0 

Query: 1   MPSRHDSTIALDKAMLLYCIMEELPINLGEIVCQQIHAFVRHPRGATPFPYLIEQLCLKV 60
           MP+RH STI++++ ML+YCIM+++ +N+G+I+   I A V+HPRGA PF YLIEQLCL+ 
Sbjct: 38  MPTRHVSTISMERVMLVYCIMKKILVNIGKIISNHIIALVKHPRGARPFSYLIEQLCLRA 97

Query: 61  VPALKTFPAIPIKDGLCSITSLKRIINLHKN 92
              L+  P + +KDG+   ++L RII +HKN
Sbjct: 98  CLMLEKLPQVEVKDGIWLPSTLHRIIAIHKN 128

[Close]
BLAST of PI0000100 vs. NCBI nr
Match: KAA0054837.1 (hypothetical protein E6C27_scaffold406G00150 [Cucumis melo var. makuwa] >TYK27771.1 hypothetical protein E5676_scaffold1142G00370 [Cucumis melo var. makuwa])

HSP 1 Score: 101.3 bits (251), Expect = 4.6e-18
Identity = 44/82 (53.66%), Postives = 64/82 (78.05%), Query Frame = 0 

Query: 1   MPSRHDSTIALDKAMLLYCIMEELPINLGEIVCQQIHAFVRHPRGATPFPYLIEQLCLKV 60
           MP+RHD+TI+ ++ MLLYCIMEE+P+++ EI+C  I A+V+HPRGA PFP+LIE+LCL+ 
Sbjct: 211 MPTRHDNTISFERIMLLYCIMEEIPVDVDEIICDHIKAWVQHPRGAKPFPHLIERLCLRS 270

Query: 61  VPALKTFPAIP-IKDGLCSITS 82
              L+  P I  ++DG+C+  S
Sbjct: 271 CSELEQSPQIACVQDGMCNTKS 292

The following BLAST results are available for this feature:
BLAST of PI0000100 vs.
Match NameE-valueIdentityDescription
BLAST of PI0000100 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5A7SRQ11.0e-2353.85Drebrin-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold156G00660 P... [more]
A0A5A7VJ484.8e-2152.75Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A5D3BPB14.8e-2152.75Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A0A0LAN02.0e-1950.55Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G263250 PE=4 SV=1[more]
A0A5D3DVQ62.2e-1853.66Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
BLAST of PI0000100 vs. NCBI nr
Match NameE-valueIdentityDescription
KAA0032726.12.1e-2353.85drebrin-like [Cucumis melo var. makuwa] >TYJ98758.1 drebrin-like [Cucumis melo v... [more]
KAA0066376.19.9e-2152.75hypothetical protein E6C27_scaffold21G004490 [Cucumis melo var. makuwa][more]
TYK00908.19.9e-2152.75hypothetical protein E5676_scaffold602G00710 [Cucumis melo var. makuwa][more]
KGN57727.14.2e-1950.55hypothetical protein Csa_009739 [Cucumis sativus][more]
KAA0054837.14.6e-1853.66hypothetical protein E6C27_scaffold406G00150 [Cucumis melo var. makuwa] >TYK2777... [more]
BLAST of PI0000100 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
PI0000100.1PI0000100.1mRNA