PI0000075 (gene) Melon (PI 482460) v1

Overview


Name	PI0000075
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	Protein MICRORCHIDIA 7-like
Location	chr07: 2191076 .. 2192109 (-)
RNA-Seq Expression	PI0000075
Synteny	PI0000075

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACTCCCGAATCAACCTTGTACAATCACCAACCTCCTCCTCCTGTTCCTTCATCCACTGATAGGGTTAACCCCTCGTTTGGACAGCCACAACCTAATTTTCCACAGGTAATTATTTACAAACACTACTACTCGTTAATTTCTTTGTTTGTTTTCTCTTTTTATGGCTATCTTTCTAAAAAAATGTAATTATTATAAATTTGTTTGTATTTTTGGATAGATTTCCGAGTACATAATCATCATTCTTCCTACTTGCAGCCACCCACCAACTCAAACGGAACGTTATTTGGTAATAATGATATATCAAGTTTGAAGAAGGGGAGAGGAGCTAATTGATTTGCTCGAGCCGAGGTGACTAAAATCATCAATATAATATATTTCGCTTCAGAAAGTTTAAATTTTTATTTCATTGCTTTGCCCGTATTAATTATTTTAATTTGTCTACAGGTTAAAGGATCCATATATCAGCAGTTTGATGACCTATTTGTTGAATGAAATGGACAAGTATAGATGTCTAGAAAGCAAAGTAAGCATCCATGATTCCAAAAATTTTCATTCAGGGTTTTGTGTTTTCTTGAAATCCAACTTTTTGAAATTGTATAACTATGATAAAAGATTTGATAAAGGTTTTTCTAAGAGAGAAAATATTAAAAATATAGATCATGAATCTGATCATCATATTTTTCCTCAAAGGTTGTGACTCTTACCAACCAACTGGCATGAAGCAACCCCCCAAAAGCTAGAAGAGAAGGAGAAAGAATGTATGTTTCAGATTGATTTCAGTTCAGCTGAAATCATGAAAAAAGACAGGAGATAGCCATTTTGACCGAAAGATTATGGGTTAGTAACATCTTTAAAATAAGACCTAATGAAAACTAAGCCCAAAACGTAGGGCGGAAATTAATATAACATAATGTAAAGTTCGATTTATTTGTTGTTGTGTTGATTCACAGGATGCTGCAATCACTATTAACGAGCAACAAGGGAGGATATGTCAGCTACAAAACAGTATCACTTTCAAATCCCAAAACTGA

mRNA sequence

ATGACTCCCGAATCAACCTTGTACAATCACCAACCTCCTCCTCCTGTTCCTTCATCCACTGATAGGGTTAACCCCTCGTTTGGACAGCCACAACCTAATTTTCCACAGCCACCCACCAACTCAAACGGAACGTTAAAGGATCCATATATCAGCAGTTTGATGACCTATTTGTTGAATGAAATGGACAAGTATAGATGTCTAGAAAGCAAAGATGCTGCAATCACTATTAACGAGCAACAAGGGAGGATATGTCAGCTACAAAACAGTATCACTTTCAAATCCCAAAACTGA

Coding sequence (CDS)

ATGACTCCCGAATCAACCTTGTACAATCACCAACCTCCTCCTCCTGTTCCTTCATCCACTGATAGGGTTAACCCCTCGTTTGGACAGCCACAACCTAATTTTCCACAGCCACCCACCAACTCAAACGGAACGTTAAAGGATCCATATATCAGCAGTTTGATGACCTATTTGTTGAATGAAATGGACAAGTATAGATGTCTAGAAAGCAAAGATGCTGCAATCACTATTAACGAGCAACAAGGGAGGATATGTCAGCTACAAAACAGTATCACTTTCAAATCCCAAAACTGA

Protein sequence

MTPESTLYNHQPPPPVPSSTDRVNPSFGQPQPNFPQPPTNSNGTLKDPYISSLMTYLLNEMDKYRCLESKDAAITINEQQGRICQLQNSITFKSQN

Homology

[Close]

BLAST of PI0000075 vs. ExPASy TrEMBL
Match: A0A0A0KVR2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G007690 PE=4 SV=1)

HSP 1 Score: 69.7 bits (169), Expect = 7.5e-09
Identity = 45/111 (40.54%), Postives = 54/111 (48.65%), Query Frame = 0


Query: 2   TPESTLYNHQPPPPVPSSTDRVNPSFGQPQPNFPQPPTNSNGT----------------- 61
           TP ST+Y++    P P ST   N   GQP+P+   P  NSNGT                 
Sbjct: 63  TPGSTMYSYTSHQPSPPSTSMANHVIGQPRPSVQPPTVNSNGTSFGNMASIISSLERGDE 122

Query: 62  -----------LKDPYISSLMTYLLNEMDKYRCLESKDAAITINEQQGRIC 85
                       KDPY SSLMTYLLNEMDKYRCLES    ++I+     +C
Sbjct: 123 DKLIDLLRPERFKDPYFSSLMTYLLNEMDKYRCLES---TVSISMTPNTLC 170

[Close]

BLAST of PI0000075 vs. ExPASy TrEMBL
Match: A0A5A7TSG1 (Protein MICRORCHIDIA 7-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold46G002400 PE=3 SV=1)

HSP 1 Score: 65.5 bits (158), Expect = 1.4e-07
Identity = 41/100 (41.00%), Postives = 48/100 (48.00%), Query Frame = 0


Query: 1   MTPESTLYNHQPPPPVPSSTDRVNPSFGQPQPNFPQPPTNSNG----------------- 60
           MTP ST+Y +      P ST   NP   QP+P+   P  NSNG                 
Sbjct: 646 MTPGSTMYTYTSHQSSPPSTGMANPVIRQPRPSVQSPTVNSNGMLFGNAGITSSLKRGKE 705

Query: 61  ---------TLKDPYISSLMTYLLNEMDKYRCLESKDAAI 75
                     LKDPY+SSLMTY  NE+DKYRCLES  A +
Sbjct: 706 ELIDLLRPERLKDPYVSSLMTYFSNEIDKYRCLESTVATL 745

[Close]

BLAST of PI0000075 vs. ExPASy TrEMBL
Match: A0A5D3E1L0 (Protein MICRORCHIDIA 7-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold655G002410 PE=3 SV=1)

HSP 1 Score: 63.5 bits (153), Expect = 5.4e-07
Identity = 41/100 (41.00%), Postives = 47/100 (47.00%), Query Frame = 0


Query: 1   MTPESTLYNHQPPPPVPSSTDRVNPSFGQPQPNFPQPPTNSNG----------------- 60
           MTP ST+Y +      P ST   NP   QP+P+   P  NSNG                 
Sbjct: 556 MTPGSTMYTYTSHQSSPPSTGMANPVIRQPRPSVQSPTVNSNGMLFGNAGITSSLKRGKE 615

Query: 61  ---------TLKDPYISSLMTYLLNEMDKYRCLESKDAAI 75
                     LKDPY+SSLMTY  NEMDK RCLES  A +
Sbjct: 616 ELIDLLRPERLKDPYVSSLMTYFSNEMDKNRCLESTVATL 655

[Close]

BLAST of PI0000075 vs. ExPASy TrEMBL
Match: A0A1S3BYQ8 (protein MICRORCHIDIA 7-like OS=Cucumis melo OX=3656 GN=LOC103494886 PE=3 SV=1)

HSP 1 Score: 63.5 bits (153), Expect = 5.4e-07
Identity = 41/100 (41.00%), Postives = 47/100 (47.00%), Query Frame = 0


Query: 1   MTPESTLYNHQPPPPVPSSTDRVNPSFGQPQPNFPQPPTNSNG----------------- 60
           MTP ST+Y +      P ST   NP   QP+P+   P  NSNG                 
Sbjct: 651 MTPGSTMYTYTSHQSSPPSTGMANPVIRQPRPSVQSPTVNSNGMLFGNAGITSSLKRGKE 710

Query: 61  ---------TLKDPYISSLMTYLLNEMDKYRCLESKDAAI 75
                     LKDPY+SSLMTY  NEMDK RCLES  A +
Sbjct: 711 ELIDLLRPERLKDPYVSSLMTYFSNEMDKNRCLESTVATL 750

[Close]

BLAST of PI0000075 vs. NCBI nr
Match: KAE8649075.1 (hypothetical protein Csa_014868 [Cucumis sativus])

HSP 1 Score: 69.3 bits (168), Expect = 2.0e-08
Identity = 43/96 (44.79%), Postives = 48/96 (50.00%), Query Frame = 0


Query: 2   TPESTLYNHQPPPPVPSSTDRVNPSFGQPQPNFPQPPTNSNGT----------------- 61
           TP ST+Y++    P P ST   N   GQP+P+   P  NSNGT                 
Sbjct: 607 TPGSTMYSYTSHQPSPPSTSMANHVIGQPRPSVQPPTVNSNGTSFGNMASIISSLERGDE 666

Query: 62  -----------LKDPYISSLMTYLLNEMDKYRCLES 70
                       KDPY SSLMTYLLNEMDKYRCLES
Sbjct: 667 DKLIDLLRPERFKDPYFSSLMTYLLNEMDKYRCLES 702

[Close]

BLAST of PI0000075 vs. NCBI nr
Match: XP_011654321.1 (protein MICRORCHIDIA 7 [Cucumis sativus])

HSP 1 Score: 69.3 bits (168), Expect = 2.0e-08
Identity = 43/96 (44.79%), Postives = 48/96 (50.00%), Query Frame = 0


Query: 2   TPESTLYNHQPPPPVPSSTDRVNPSFGQPQPNFPQPPTNSNGT----------------- 61
           TP ST+Y++    P P ST   N   GQP+P+   P  NSNGT                 
Sbjct: 652 TPGSTMYSYTSHQPSPPSTSMANHVIGQPRPSVQPPTVNSNGTSFGNMASIISSLERGDE 711

Query: 62  -----------LKDPYISSLMTYLLNEMDKYRCLES 70
                       KDPY SSLMTYLLNEMDKYRCLES
Sbjct: 712 DKLIDLLRPERFKDPYFSSLMTYLLNEMDKYRCLES 747

[Close]

BLAST of PI0000075 vs. NCBI nr
Match: XP_038889923.1 (protein MICRORCHIDIA 7-like [Benincasa hispida])

HSP 1 Score: 67.8 bits (164), Expect = 5.9e-08
Identity = 55/108 (50.93%), Postives = 60/108 (55.56%), Query Frame = 0


Query: 2   TPESTLY---NHQPPPPVPSSTDR-VNPSFGQPQPNFPQPPT-NSNGT------------ 61
           TP STLY   +H   PPV  ST R VN  F Q  P F QPPT NSNGT            
Sbjct: 630 TPGSTLYTYTSHSHQPPVTPSTARPVNHVFEQ-SPPFVQPPTANSNGTLFGNIDISSLKK 689

Query: 62  -------------LKDPYISSLMTYLLNEMDKYRCLESKDAAITINEQ 80
                        LKDPY+SSLMTYLLNEMDKY+ LESK A  T+N+Q
Sbjct: 690 GREELIDLLRPGRLKDPYVSSLMTYLLNEMDKYKSLESKVA--TLNKQ 734

[Close]

BLAST of PI0000075 vs. NCBI nr
Match: KAA0044501.1 (protein MICRORCHIDIA 7-like [Cucumis melo var. makuwa])

HSP 1 Score: 65.5 bits (158), Expect = 2.9e-07
Identity = 41/100 (41.00%), Postives = 48/100 (48.00%), Query Frame = 0


Query: 1   MTPESTLYNHQPPPPVPSSTDRVNPSFGQPQPNFPQPPTNSNG----------------- 60
           MTP ST+Y +      P ST   NP   QP+P+   P  NSNG                 
Sbjct: 646 MTPGSTMYTYTSHQSSPPSTGMANPVIRQPRPSVQSPTVNSNGMLFGNAGITSSLKRGKE 705

Query: 61  ---------TLKDPYISSLMTYLLNEMDKYRCLESKDAAI 75
                     LKDPY+SSLMTY  NE+DKYRCLES  A +
Sbjct: 706 ELIDLLRPERLKDPYVSSLMTYFSNEIDKYRCLESTVATL 745

[Close]

BLAST of PI0000075 vs. NCBI nr
Match: XP_008454488.1 (PREDICTED: protein MICRORCHIDIA 7-like [Cucumis melo])

HSP 1 Score: 63.5 bits (153), Expect = 1.1e-06
Identity = 41/100 (41.00%), Postives = 47/100 (47.00%), Query Frame = 0


Query: 1   MTPESTLYNHQPPPPVPSSTDRVNPSFGQPQPNFPQPPTNSNG----------------- 60
           MTP ST+Y +      P ST   NP   QP+P+   P  NSNG                 
Sbjct: 651 MTPGSTMYTYTSHQSSPPSTGMANPVIRQPRPSVQSPTVNSNGMLFGNAGITSSLKRGKE 710

Query: 61  ---------TLKDPYISSLMTYLLNEMDKYRCLESKDAAI 75
                     LKDPY+SSLMTY  NEMDK RCLES  A +
Sbjct: 711 ELIDLLRPERLKDPYVSSLMTYFSNEMDKNRCLESTVATL 750

The following BLAST results are available for this feature:

BLAST of PI0000075 vs.


Match Name	E-value	Identity	Description

BLAST of PI0000075 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KVR2	7.5e-09	40.54	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G007690 PE=4 SV=1	[more]
A0A5A7TSG1	1.4e-07	41.00	Protein MICRORCHIDIA 7-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaf...	[more]
A0A5D3E1L0	5.4e-07	41.00	Protein MICRORCHIDIA 7-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaf...	[more]
A0A1S3BYQ8	5.4e-07	41.00	protein MICRORCHIDIA 7-like OS=Cucumis melo OX=3656 GN=LOC103494886 PE=3 SV=1	[more]

BLAST of PI0000075 vs. NCBI nr


Match Name	E-value	Identity	Description
KAE8649075.1	2.0e-08	44.79	hypothetical protein Csa_014868 [Cucumis sativus]	[more]
XP_011654321.1	2.0e-08	44.79	protein MICRORCHIDIA 7 [Cucumis sativus]	[more]
XP_038889923.1	5.9e-08	50.93	protein MICRORCHIDIA 7-like [Benincasa hispida]	[more]
KAA0044501.1	2.9e-07	41.00	protein MICRORCHIDIA 7-like [Cucumis melo var. makuwa]	[more]
XP_008454488.1	1.1e-06	41.00	PREDICTED: protein MICRORCHIDIA 7-like [Cucumis melo]	[more]

BLAST of PI0000075 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..47

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0000075.1	PI0000075.1	mRNA