PI0000009 (gene) Melon (PI 482460) v1

Overview
NamePI0000009
Typegene
OrganismCucumis metuliferus (Melon (PI 482460) v1)
DescriptionHistone H3.2
Locationchr01: 19035634 .. 19047676 (+)
RNA-Seq ExpressionPI0000009
SyntenyPI0000009
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CTCATTTCAACCATTTCTTTTCTTAGTACTTAATTTTGTCGGTATTTTGGAAAAAAAACATAATTTCTGAAAATAACTTTCTATTTGCTATCCATTTTAACGAAATAAAATAGCGGGAAGTTCCGAAGTTGTGTTTTGGTGAGTACTGTCTTTGAAATCAGCCATTTTTGCCCAAAATTGAAACATTGAGCTCCATTGGCATTCTCCCTAAATCCCCTCTCACGCTACTGCTTTCAACTCCGAATCAATGGCGCGAGCCAGGCATCCACCCCAAAGAAAGTCCAATCGCACGCCATCAGGTTCTTCCTTTCACTCTTCTGCATACACACAGTAATTTGGATAAATTTTACTTCTTTCTTTTTTTTTTTTTTTTTTTTTTGGATTGGTAATGGTTTTGTCCATGGAAGTGTTGTTGAATGTATTGAGCTTTTGTTTTTAATTTCTTTATTGCTTCTCGTTTTGTTTGTGAAATCTTAGGTTCTGGAGCTGCACAGTCTTCCCCAGCTGCCCCTTCGACGGTATTACTCTCTCGCTTTCTGTACAATGTTTAGATTTTCGCTTCCACGTTTCTATTTTATTTGGCTACGTATCATGGAAAGATGTTGGGGAGATCTTAGATTATGGTTTGTGAGGTCTGGTTTCAGTAGATTTGGTGGCTTAAGAATTTTGGAATATGAGAATGCTGTCATTATTTTCCATTTTTAACATACAATTTCTTCTTCAAATAAAGGGGAAAAAAACCCGTAGACTCTTTTCATTTTGATGATAGGATAGTAGGAATGAGAGAATAAATTATTAAATTTTGGCCTATTGATTTTTTCCCTCGTTTGTGGCAAGGGTAAGATAGAGCTTGGGTGTACATGCCTCTTCTAAGTTGAAGGCTCACTTGTAGAAGTATGTTGTCTGATTGGGTTGTTTGATATTGGATCGGACATCCCGAACTTGTGACAGTGTGTTGGTAGACAAATTACCCCTCAAATTCGCTTTACTTATGAAATGAAGGTTACACTTGGGAGTAAGGAGGGGATTAATGGGATAAATTGATATGCAGGGTTGATTACTAATGGTATATAGTATATAGAAAGCAGAGATGGTTATCGTGAAGATGTAACTTTTACAACCTTTGATGTGGGGGATTTGTTTCCATATGGATATTTAGTTTTGATTTGGGGATCTCTTATGTCTACCAAAACTATCAATTGGACTAGATTGGAGGGATGCTCTGATTGGAAAGTGATAGGAATGCTATTAAGGATATATTAGTAATTAGCTAGGGAACTTGTTATAATATTTGGTTATAGATAAAGAGAGTGGGAAGGGAAGATGTATACATTATTGTAGCATGTGATTTAGGGTTTGAACTTGAAATATATCTCAATAGTGGGAGGGTCCAAGTACCTTGAACCCTTGGTTTATCTTGTAAGTTTTCATAATTTATATTGAATAGAAGAAGAAGACAAATACAAGGTATACGTAGAAAATCCTAGTACAGGGAGAAAACACCACGATAGAAACCACTCTTATTATTTTCTAATAATCCAAAGGATACAAGGGGTAAAAATATATATAGGCTACAACAAGCCCTAACAAATAAGGAAATAAAACTAGGGTACAATAAAATACAAAAATACCCTTGAGGCTTTAAACAATCAACTAGCTCCTTATTTCCAACATATTTCCAACATTCCCCCTCAAGTTGGAGCATAGATGTCAATTTGACCCAATTTGACCCAACTTGCTAACAAAAGAGTCAAAGTTCTGTTTGAGTAATCCTTTGGTGAGAACATCAGCAATTTGTTGACTGGATGGATTGTACGAAATATAGATATTGTCATTACCAAGTTTCTCCTTTATAAAATGTTTGTCAATCTCCACATGTTTTGTTCTGTCATGTTGAACTAGGTTATTAACTATGCTTATAGCAGCTTTATTATCACAGAAGAGCTTCATAGGTAACTCATATTCTTGGTGAAGATCAGACAAAACTTTCTGCAGCCAGATCTCTTCACAGATTCTCAAACTCATTGCTCTGTATTCAGCTTCAACACTACTCCTAGCGACAACACCCTACTTCTGACTCTTCCAAGTAACAAGATTACCCCACACTAAGGTACTGTATCTTGAAGTGGACTTTCTGTCAGTAATTGATCCTGCCCAATTAGAGACGGTATAAGCCTCCATATATTTTCTGTCAGTTTTCCTAAACATTAGAGCTTTACCTGGAGTAGTTTTCAAATATTCAAAATACGAGCTTGCATGTGTTCTTTGTAGGGTGCCTGCATAAACTGACTCACAATACTAATGACATAAAAGATATTTGGTCTAGTGTGGGATAGATAAATCAACTTTCCCATTAGACGCTGATACTTCTCTTTATCAACGGGAACTTTGTCAATGGAATTTCCCAATTTCGCATTGAATCCCATAGGAGTATCAACAGGTCTACATCCAGTCATATTTGTTTCTTTTAACAGGTCAAGAGTATATTTCCTTTGTGAAACAGAGATGCTTTCCCTTGATCTCTGCCACCTCCATCCTAAGGAAGTATTTCAAATTTCCTAGGTCTTTGAGTTCAAATTTGTCACCCATTTTCTTTTTTAGCTTGGTAATCTCAGCAGTATCATCTCCTTACAGGATAATGTCATCACGTACACAATCAACACAACAATTTTCCCAGATTCGGACCTTTTTGAAAACAGGTGTGATCATAATGTTCTTGAGTGAAGCCTTGAAATTTAACAAAGATGGTAAATCTATTGAACCACGCCTTGAGGGATTGTTTCAGACCATAAAGAGATTTTCGAAGCTTACAAACTTGGTGGTTAAACTGAACTTCAAAACCTGGAGGACTCATGTACACTTCTTCTTCCAAATCACCATTTAGGAAAGCATTCTTTACATCAAGTTGATGGAGAGGCCTCTTTGTTGATTGCAACAGATAGAAGAACTCTAACTATGTTAACTTTGACAAAGGAAAAAAAGTCTCTGAATAATCTACCCAATAAGTCTGAGTGAACCCTTTTGCAATAAGTCTGGCCTTATACCTGTCTAAGGTCCCATTTGATTTGTACTTCAGAGTAAACACCCATTTATATCCCACTGTCTTGTGCTCTTTAGGTATGAGTGCAAAGATCTCATGTCTTATTCTTCTCAAGCACTCTCATTTCTTCCATGACAATAGTCTTCCACTCTAGACTCGCCATAGCTTCATGTATGTTCTTTGGTATTGTTGCAGTATGGAGGCTTGTAGTGAACGCCTTGAACTTAGGCAATAAATTACTGTAAGACATGTAATTACACATAGAGCTTCGTACAGGACCTAGTACCCCTTCTCAAAGCAATGGGCATGTCAAGAGAGGGATCATAACTCCCTGGTTTGTCTGAGTCATCCTGGCTGGCCTCACCCACCTGTTTTTCTACTAGAGTTTCATCTCTTCTGACAACCCTGTTCTCTTTTGGGATATCATATTAGTTCTGTCCTCCCCAACCACATCAACAATATTATCCTCAATGCATTAGTTATTATTATTAAGTTTAGTCATACCTTGAGCTTGTGTTGGTTCAGATTCATGGACTGGAGTCGACAAAGCAGTAGGGTGCACCATTTCCTTTCTAAGGTTCTTCATGTAGTAAGTTATCCAGGGGACTTGCTTGGTGGGTAGAATGGTGTCAGGGAGGATGGGTTCAGAAGGCTCAGTAAGAGCTAAAGGAATGAAGGAAATGAGCCAGTTAGCCTCTTCACTCACACTCACCCCCTAAAGAGGGCTCACAGGGAAGAAAGGTTTGTCCTCAAGGAAGGTGACATCCGTGGACACGAAATACTTTCAAGAAGGAGAAATGATAACACTTTTAACCTTTCTGGTGTGGAGGATACCCCACAAAAACACATGACTGAACACAAGGAGCAAACTTAGTATGGTTAGGGCTATAACTTTGAACGAAGGTAGTGCACTCGAGCACACGGAGAGGAACATCAGGAATAAGCCGTGTGGTAGGGTAGAACTCCTTAAGACATTCAAGAGGTGTTTGGAGGTGGAGGATGCGAGATGCCATTCTATTGATAAGATGAGCCGCAGTGAGGATTGCATTCTCCCATAAGTAGGAGGGAAGAGAAGTAGACAACATGAGAGAGTGAGCAACCTCGAGGAGGTGAGGGTTTTTTCGTTCAACCACCCTGTTCTATTGAGGAGTATTGGCACAGAAACTTTGGTGGACAATCCCTTTAGGATAGAAATTCATGAAGGGTATTATTCAGAAACTCACAACTGTTATCGCTATGCAGAATAGCAATTTTGGTGTTGAACTATGTTTCAATGGTTGTGTAAATTGTTGACATTGATGAGACCCTAGATTTATCAGTAAGGAGAAAGACCCATGTGAGACGGGTATGATCATCAATAAAGGTCACAAACCAACTTTTCCCCGAAGCGGTGGTGATCCGCGAGGACCCCCAAACATCACTATGAATGAGGGTAAAAGGCTGGGTAGGTCTTTAAGGCTGAGACAGAAACGCAACTCTATGTTGTTTTGCATGAATACAACATCACAGGACAAAGAAGTGACATCCACTTTAGAAAATAAATGAGGAAATAGATATTTCATATATTGAAAATTTGGGTGGCCAAGACTAAAGTGCCACAACATACAATCTTTTTCAGAAGTAGAAAAATAAGATGACAATAAACTAGTCTATAACAATCCCTAGATGAAGCATCATTGTCAAGGAAATAGAGTCATCTACTGTGTCGAGCAGTGCCAATCATCTTCTTCGAGCTCAAGTCCTGAAAAGAAACAATATTAGGTGAGAAGACAGGTTGACAAGGTAGATCCCTGGTTATCTTTCTAATAAACAGTAAACTGTAAGATATCTTACGGACATGTAGCACATTCTGTAAAGTGAGACCTTCAAAAAGGGAAATATGACCCTTGCCCGCAATAGGAGCGAAGGACCCATCTGCAATCCTAATTTTTTCATTCCCAGTACAAGGAATCTATGAAATAAAATGTTCAGAGGATCCAGTTATATGATCTGTAGCACCTGAATCAAGTATCCAAGATTTCTTCCCATCGATGCTGATAAGACTGAAGGATTGAGAGTTACCTAATTGTGCAATGGCTCCAAGAGAAGAAGTACTAAGATCACTTTGATTTTCAGCGGTTGCAGGAGTTGGGGTGTGTTACGTTCCAGCAGATTCACTCATAAATGCCCTACCAGAATTATGCTTGTCATTTGGCAAGCGTTTCTTACCATTTGGTGGTCGACCATGTAACTTCCAACGGTTGTCTTTCGTATGCCAAGGTTTCTTGCAATGTTCACACATTGGGACAGGCTTCTCATTTTTCTTTTCACAGTCGGAATTGGAGGACTTCGCATTGAAGGCTGCAGAATCAATGATTGGAACGGCCAAGATGTTCATTGCACTTGTGTGATCTTCCTCTAGACGAACCTCATAACACGCCTCCGTCAATGAAGGGATGGGCCTCTCACTCAGTATACGACCACAGACTAAGTCAAACTAGGAATTCAAGCCAGTAAAGGAAATCATACACATGATCGACTTCCTCAATTTTGGAGTACTGAACACGTCCACAAGGGCAATCTTTAGACAATCTCTTGACACAGATCCATCTCTTGCCAAATCAGGGATCAGTTTGTTAAAATATGAAGTAACATCCATTGTCCCCTGCTTGCATTCGTGAAAATGCTTACGCAAAGTATAAAGGTGAGATGCATTCTTCCTCTTTGAGTATAACTTCTGAACTGTATCCCATATGTCCCGAGCGGTAGCGACATACAATAAAGGTTTCCCAATTTGAGGTTCCACACTGTTAATTAACATAGACCAAAGAAGAGAGTCCTCTCCTTTCCAGATTCGTTGTTGAGGGGCCCTGGTCTAGGTCTCAGTACCTCTTCTGTTAGGTACCCAAATTTGTGACGCCTCTTAAGGGCCATCTTATTGGATTGAGACCACGAGAAATAATTCTGGCCATTCAATTTCTCCCCTCCAATTGGTCCTATGGAACTTCCCATGGAGCCAGATAAATAATTTGTAGCAGTTAAGGTAGGGAAAGAGGTTATTGGGTTCTCCTAATACATCGGTAAGACTGAAGGAGTGGCAGAATTTGTGGAGTTTGTGGAAGCACCTAGAGCTGTCCCAAGAGCAGCGATTTGTTGCTGGAAACTTGTCTGAAAATTAGCCAACTGTTGTTGAACCATTATTGGAGATAAACCAATCAAACCTTGATGTTCATGACTAGGCGACGCATGATGAGGAAAACCCGGTTGTTGCGAGAAGCTTGTTGTCGTGACAGGGAATTCATCTCTGTGACAGGCAGACGACGTACTAATCTTGTTTTCACAGTGTATGTTTCGACTAGGGTTTCCATCAAAGGGTTGTGGAGGCACTAGAGTTGGATGGATGTGCAAGGACTAAAGATAATGATCAACGATAGCTTGGACAGCAGTGACAGTATCAGCAATGGGAAAAATGGCAGCTCCATCGGCAGTGATGGCAGTTGTGGCTGAAGCGGGGCTAGTGCAAAACTAAGGTTATCTTGCACTGGCTGGTTTTCGCCAATGGTGGTTAGGCTTTCGTCACCACTCTCTGATACCATATTGAAAAGAAGAAAAAGACGTTTCAAGGTATACGTGGAAAATCCTAGTAGAGGAAAAAACCACGATAGAAGTTGGTCTTATTATTTTCTAATAGTCCAAAGAATACAAGGGGAAAGAATATATATAGGCTACAACAAATCCTAACAAATAAGGAAATAAAACTAGGGTACAATAAAATACAAAAATACTCTTGAGGCTATAAACAATCAACTAACCCCTTATTTCCAACATATTTCCAACAATTTGTATTTTGTTACATGATATAATATTAAATTTACTTTCACTCGTCAGCTTAAGGTTTTAGGCATCGATGATTTAACACATTTCAATATAGTTTGAAACTATTTTGTTTCCTACCAGAAAGGGAGTCTTTTCCCTAATTTCCACCAAGTATATAGGCTGATGCAGCCACCCAACAGAGTACAAGAAGAAAATAACTTTCAAATAGATGCGTCTTGCCCCATCCAATTACAGGGTTTGAAGTTGTTCATTTTTAAGGGCCATTGGTGGTAGAGAGCTTTATGTTTGTAATTGCAAGATAATTTTTTGGTCAAATATATTTATATTTTCTTACTCTTGGTTTACTTCAACTAGTTTGGTTCAGTTGCTTATTTATATTATATATAGATAGATAGATGATGGATATATATAGATAATTGACTAACTATTATTCTGTCCTCGAAATTGATAGCCACTTAATGGAAGAACGCAAAATGTTGGGCAAGCTCAAAGTGAGTTCTTTTATTCTGGCTTTTGATCACCTTTGTATTAACATTTTTATTTTGGTGATAGCTATTTTGCATTTGCTTTTTGAACTGGTTTATTCTGTGTAACATGGTCTTTTTTCTTTTCTTTTTTTTTCATATGGCTTGAAAACTTTTTAATATAGGCTCATCGTCAAGAACAACAAAGAAAAAAAAACGCTTCAGACCAGGGACGGTGGCATTGAGGGAAATTCGGAATTTCCAGAAATCATGGAATCTGCTAATTCCAGCTAGCTGTTTCATCCGAGCAGTAAGGTTTTTTTTTTTTTCATTTTTCCTTTTTCCTTTTTCCTTTCTCTTTTTCTGTTGTTCCTATGTATATAAGGACATCATTGCATGTATATTTTCACTAATTGATTTAAGGAGTCAAATATGGTCAGCCTTTTGATTTATAGATAACAGAAATGGTTAGTACAGAAACTCAGGAGAAACGAAACTTCAAATATGAGAAAAAACATTCAAGAGAAAAGTCCTATATAAATTGATTCGTACTTCTGACAAGTATTATAACCTAGTTTATTATACTTACAATGATATAAAATGGTCTTAATGCAGTTGAATATGCTATGTGATTATTTTGATAGCCAACCATTCATGTTTCTGGTCTCATATTGAGATGTCCGCTTCTTTGCCACGACAGTAGTCTTCGTGCATCTATTCTATTTTATAAGAGTTCACTCTATACATTTCTGAGGCTATTTCTTTTGGAAAAAAAAAATGGAACTTCAATCAAGAAATGTGGAATACAAAAATATTGGAGCCGCCTACCTAGTATAGTTATTATAGACGCTACTTGCCTAGGATAAAATTCTATGAATTTCTTGACATTGAAATTAGTTGAGGCTAAGGTGGTCTCATGAGATTGATCAAAGTGTGCAATCTAAGTTAGGCACTCACAGATATAAATATATATTAACACGTATGTAATGAAAACAAAGGGGAATATCATGAACAACTTAATAGTGGAAACCCATGATACTGCGTTGAAATCTGCTGGACCCCAGCCCTTCTGCCATTGATTTTCTATAGCCAAATGTTCCACATAAGAACCTCATAGCCAGCTTGTAAAAAAGAATCCTCTTGTCCTCAAATGGGGCTTTGTTAGTTGAGTTCATAAAGAGCAAGAACATATTAAATGCTCATTTTGTTATTACTTATATTGCTTTTAAATTTTGATCCTTTGACGGCTATAATAAACCCTTGTAGGTGAAAGAAGTAAGCTACCAGTTGGCTCCACAGATTACGCGTTGGCAAGCTGAAGCTTTAGTAGCTCTTCAGGAAGTAATTGCTTCTTTTCGTTGGTTTGGTTGAGTGAGCCTTCCTTTATTTGTCTACACTAATGAGAAGAGTTGTCTTCCATTTTGTCTATACTAGGAAGCAGCTTCTCTTCCTTTGTGCTACACTACTTTTGGCAATAGCGTTTGGAATTTCAAGCTTATAATTCTTTTAATTTGTTGCAACTTGGAGAAAAAATTAAAATGCTCTTTGTTGTGTGAGTGTGTGTGTGTGTTTGTTTCCTTTCCAAGCTATTGTTTAATTCTTGATTTATAAAATTTGATGTTGTGGTTTAATACTTTGAAACTACCGTTTGTTTCCCAAACTTTTCTATTAAGGAACATGGTAGAAATGTCGGTTTTACTTAATTGTCTTGGAACAACTGGTTTAAACCAATTTGTGTGTTTGTGTCATAACTTTGTGCCTCTCGATAGCCAAGTAAGTACTTGCACAGTTTACTTCTTATTTTTAAGCGTATCTTGTTCTCACCTAGTTCAGGTAGTTGGATTTTATGCCATCTTTAACTGTAAATTTTATTTCCATTTAATGAATCATGTTGTTTTGTTCTTTAAGATGGGAACTAAGCGAAAACATCAAACCTTCTCATGTTTATTTTGAAGTTCTGATTTGGACCGTAGTAATATTTTCCCTTGATTCTTTTATCTACGATTATTTAAAGTATGTTAAACAAGCTTTATTCTGTTGTCGATCTTTTTTTAATTTTAATTTAGCCTCATACTGTTTATAATTGATCTCTGACTCACTGTTGTATTTCTATCCATGGCCATATTTGGCTTAATACTTAGTGTTATTACAAGATATTAGGAGTGACTTAATTTTCACTTTTATGTGCAATTATGTTATTATGATTTCCTTTTTGAGTTAGTTTCTTCCGTTTTTCTGTTGCATACAAAATATTTTTATTTCTTGCAACAAAAATTTTGCCGACCTGATTCCAGTTTTTGTAGTGCAATCTCACACTGTGTCACCTGTTTTTATGAAGCCTGATTGTATTTTGTTGAAATCTGCTTTTTGTTAGGTTTTCTTAAGATCAAGTAAAATTTTACCATTAAACTTCTTGCATCTCTCATCTGTAGGCAGCAGAAGATTTTTTGGTTCATCTATTTGAAGATACGGTGCTGTGTGCTATTCATGCTAAGCGTGTAACTATCAGTAAGTCAATCTTCACATGTTTGAGTTTAGTTCCAATTTTGATTGTGGAAGCTATTTTTCCTGTCAGTATTATTTAGATTAAAATACCATCAAGTATTTTGAATTTTGTTCCATTTATGTCTATGTACTTTTGATTGCCTAATTTTAGCCTTTGTACTTTCAATAAATCATAAAATTAGTCCTTGCAATTATTGTCTTGTTGATTTTTTTCCCCAAAAACATTAGACTCTATGAGCATATCTTTTATAAATTGTGAAAATATATTATACACAATGCCTTTTCTTGAGAAAATTATTATTATTATTTTACTAATTTTGATAGAGAAAAATTAACTTCTAAAGACTAAACTGAAGATTATTGAATGAAAGCACAAGGATTGAATATAAGATTTATGGGAAGTATAGGAACTAAAATTGGACAATTGAAATTACAAAGACCAAAATGGACCAAAATCCAAAGTACGAGGACCAATATAGTATTATACTCTTATATTTACTAAGGAAAACTATACAAAATTAAAATTCTCAATTAGGATTTTTGTTTAACAATATTTTAAAAGTTGTTATGAAAAAATGATCGTTATAATTTATTGTCACATGAGATCCAACTAGTTTATTGTTAAAATCTGACCCACCACAAGCAAATTCCATTCTTTCCTAGTGGCACACTCATGTGTCCAAATTCGTTGACTAGGCAATAGTTTAATTTGACATAAGGTTTGGTAACAAATTTTAACAAAGGGTAACTAGCCCCATCCATGTTCGTTGAAACCTTCTTCCATTTTGTTAAAAAAATTGTGTGCTTTACTTAAACAGTAACATAGTCTCATACTCAGTGCACCAGCTTTCTTCTTCGTTTTGATTGATATTTTCTGTTGCACTATGAGGAGTTTATTTTTAAGAAAAGCAGTAATATTGAAATCTATTGTGTGATTAAGGCAAGAATACATCAGTCGCTGCATTATTTTTTTGTTTGGTTACTCAAAGTTTCTAGCTGAAAAAGATAAGAAGGAAAAAGAAAACCCAAAATCTTAATTAAAATATATGATAGTTTTTTTGCCAAAGTGAGCTTAGTTCAATGGTAATTGACATTTCCTTCCTCCGTAGAAGGTTCGATCCCTCATCCTACAGTTGTTGTACTATATATATATATTTCATGCTATGAAAAATTGAGGTTTTGTTTTGCTCGAATTTGATGATTGAAGTAACTTTTGAAATTAGAACTCTAAAATTCAAATTAAAGGTAAGGAACTCAATTGAGGGGAAAATAGTTAATCTTTCTGTTTGAATTAGGTTTAGTTGATGAAATTTGATGTTTCTACACAATGATCAAAGATCCATAAGCGAGCATATGGACTAAGATATTTCACTTCTTTAGATTGGTTGTGTTGGGAAATGATTGATAAATTTCTTTTTAACTCATTTTGGATCGCTTCTTCCTTTTTCTTCTTTACATATATGAACATGAGAACTAAAGAACACTCCTGGATTCGATAATCAATACTTTCAACTTGTAAAATAGTTGGACACTGGACTGTATAATACTCTCTAACATGATTATGAACTGTGCTAGGCTCAAAGTATCTGCTTCACTCTATAGATCTTTATTTCCTGCTATCTTCCAAGTTGTTTATTGATCCTTTAAATGTTATTCATTTCCATTCTTCCCATTCAGTGAAAAAGGATTTTGAACTGGCACGTCGGTTAGGAGGGAAAGGGAGGCCATGGTGAGAAGAGATATTCAATAGAAAGAGTAGCCGCTTTAGCAACCCAACACCTCATTAATCGGTATAATAGAATTGCAGTTGTTGATTGCTAGTAAAGTAAGCTGTATATTTGAATGCGTAGAAGTTAGGTAGTACAGAAGACAAAAATTGTTTGTTGCCGAGAAACATTTATGCCACAGCCTCCAAAGTTCCAATCCCCCATTCTCAAATTTGACTCGAGATACCAAGTTTATGTTAGCTATCTTAAAGAAGATTGTAGGATCGATTCAGCTTTGATGTGGCCATCGATTCTGACTCTTGAGTTGCTTCTTGTAATCTGTAACTTTGTTGCATTATGTTATCAGAATACAACATTTTTCTGGAAGGTCTGTCAAAAAACAAGACACCATTTGGTCAAGCCAATCTCTTTAGTAGTGTGTTTATAGGGGTAATGTTCCTTTTGTCTGTTTTTTACTATTGTTACATTTGGTGTTTGTATTTCTTTCTGTG

mRNA sequence

CTCATTTCAACCATTTCTTTTCTTAGTACTTAATTTTGTCGGTATTTTGGAAAAAAAACATAATTTCTGAAAATAACTTTCTATTTGCTATCCATTTTAACGAAATAAAATAGCGGGAAGTTCCGAAGTTGTGTTTTGGTGAGTACTGTCTTTGAAATCAGCCATTTTTGCCCAAAATTGAAACATTGAGCTCCATTGGCATTCTCCCTAAATCCCCTCTCACGCTACTGCTTTCAACTCCGAATCAATGGCGCGAGCCAGGCATCCACCCCAAAGAAAGTCCAATCGCACGCCATCAGGTTCTGGAGCTGCACAGTCTTCCCCAGCTGCCCCTTCGACGCCACTTAATGGAAGAACGCAAAATGTTGGGCAAGCTCAAAGCTCATCGTCAAGAACAACAAAGAAAAAAAAACGCTTCAGACCAGGGACGGTGGCATTGAGGGAAATTCGGAATTTCCAGAAATCATGGAATCTGCTAATTCCAGCTAGCTGTTTCATCCGAGCAGTGAAAGAAGTAAGCTACCAGTTGGCTCCACAGATTACGCGTTGGCAAGCTGAAGCTTTAGTAGCTCTTCAGGAAGCAGCAGAAGATTTTTTGGTTCATCTATTTGAAGATACGGTGCTGTGTGCTATTCATGCTAAGCGTGTAACTATCATGAAAAAGGATTTTGAACTGGCACGTCGGTTAGGAGGGAAAGGGAGGCCATGGTGAGAAGAGATATTCAATAGAAAGAGTAGCCGCTTTAGCAACCCAACACCTCATTAATCGGTATAATAGAATTGCAGTTGTTGATTGCTAGTAAAGTAAGCTGTATATTTGAATGCGTAGAAGTTAGGTAGTACAGAAGACAAAAATTGTTTGTTGCCGAGAAACATTTATGCCACAGCCTCCAAAGTTCCAATCCCCCATTCTCAAATTTGACTCGAGATACCAAGTTTATGTTAGCTATCTTAAAGAAGATTGTAGGATCGATTCAGCTTTGATGTGGCCATCGATTCTGACTCTTGAGTTGCTTCTTGTAATCTGTAACTTTGTTGCATTATGTTATCAGAATACAACATTTTTCTGGAAGGTCTGTCAAAAAACAAGACACCATTTGGTCAAGCCAATCTCTTTAGTAGTGTGTTTATAGGGGTAATGTTCCTTTTGTCTGTTTTTTACTATTGTTACATTTGGTGTTTGTATTTCTTTCTGTG

Coding sequence (CDS)

ATGGCGCGAGCCAGGCATCCACCCCAAAGAAAGTCCAATCGCACGCCATCAGGTTCTGGAGCTGCACAGTCTTCCCCAGCTGCCCCTTCGACGCCACTTAATGGAAGAACGCAAAATGTTGGGCAAGCTCAAAGCTCATCGTCAAGAACAACAAAGAAAAAAAAACGCTTCAGACCAGGGACGGTGGCATTGAGGGAAATTCGGAATTTCCAGAAATCATGGAATCTGCTAATTCCAGCTAGCTGTTTCATCCGAGCAGTGAAAGAAGTAAGCTACCAGTTGGCTCCACAGATTACGCGTTGGCAAGCTGAAGCTTTAGTAGCTCTTCAGGAAGCAGCAGAAGATTTTTTGGTTCATCTATTTGAAGATACGGTGCTGTGTGCTATTCATGCTAAGCGTGTAACTATCATGAAAAAGGATTTTGAACTGGCACGTCGGTTAGGAGGGAAAGGGAGGCCATGGTGA

Protein sequence

MARARHPPQRKSNRTPSGSGAAQSSPAAPSTPLNGRTQNVGQAQSSSSRTTKKKKRFRPGTVALREIRNFQKSWNLLIPASCFIRAVKEVSYQLAPQITRWQAEALVALQEAAEDFLVHLFEDTVLCAIHAKRVTIMKKDFELARRLGGKGRPW
Homology
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BLAST of PI0000009 vs. ExPASy Swiss-Prot
Match: Q8RVQ9 (Histone H3-like centromeric protein HTR12 OS=Arabidopsis thaliana OX=3702 GN=HTR12 PE=1 SV=3)

HSP 1 Score: 153.3 bits (386), Expect = 2.2e-36
Identity = 93/178 (52.25%), Postives = 118/178 (66.29%), Query Frame = 0 

Query: 1   MARARHPPQRKSNRTPSGSGAAQSSPAA---------------------PST-PLNGRTQ 60
           MAR +H   R   R  + +  A SS AA                     P+T P  G  +
Sbjct: 1   MARTKHRVTRSQPRNQTDAAGASSSQAAGPTTTPTRRGGEGGDNTQQTNPTTSPATGTRR 60

Query: 61  NVGQAQSSSSRTTKKKK-RFRPGTVALREIRNFQKSWNLLIPASCFIRAVKEVSYQLA-P 120
              +++ +  R ++KK  R+RPGTVAL+EIR+FQK  NLLIPA+ FIR V+ +++ LA P
Sbjct: 61  GAKRSRQAMPRGSQKKSYRYRPGTVALKEIRHFQKQTNLLIPAASFIREVRSITHMLAPP 120

Query: 121 QITRWQAEALVALQEAAEDFLVHLFEDTVLCAIHAKRVTIMKKDFELARRLGGKGRPW 155
           QI RW AEALVALQEAAED+LV LF D++LCAIHA+RVT+M+KDFELARRLGGKGRPW
Sbjct: 121 QINRWTAEALVALQEAAEDYLVGLFSDSMLCAIHARRVTLMRKDFELARRLGGKGRPW 178

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BLAST of PI0000009 vs. ExPASy Swiss-Prot
Match: Q7RXR3 (Histone H3-like centromeric protein hH3v OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) OX=367110 GN=hH3v PE=3 SV=1)

HSP 1 Score: 120.2 bits (300), Expect = 2.1e-26
Identity = 70/146 (47.95%), Postives = 97/146 (66.44%), Query Frame = 0 

Query: 7   PPQRKS-NRTPSGSGAAQSSPAAPSTPLNGRTQNVGQAQSSSSRTTKKKKRFRPGTVALR 66
           PP++    ++ + S  A + P   +TP   R       Q        KK+R+RPGT+AL+
Sbjct: 2   PPKKGGVTKSKAVSKKAAAVPTPKATPPGRRKSRASSVQPGDPVPQGKKRRYRPGTLALK 61

Query: 67  EIRNFQKSWNLLIPASCFIRAVKEVSYQLAP--QITRWQAEALVALQEAAEDFLVHLFED 126
           EIRN+Q++ +LL+    F R V+E++ Q  P  +  RWQ++A++ALQEAAE FLVHLFED
Sbjct: 62  EIRNYQRTTDLLVAKLPFARLVREIAMQFRPMDEEMRWQSQAILALQEAAEAFLVHLFED 121

Query: 127 TVLCAIHAKRVTIMKKDFELARRLGG 150
           T LCAIHAKRVTIM+KD +LARR+ G
Sbjct: 122 TNLCAIHAKRVTIMQKDIQLARRIRG 147

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BLAST of PI0000009 vs. ExPASy Swiss-Prot
Match: Q9Y812 (Histone H3-like centromeric protein cnp1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=cnp1 PE=1 SV=1)

HSP 1 Score: 114.8 bits (286), Expect = 8.8e-25
Identity = 61/102 (59.80%), Postives = 75/102 (73.53%), Query Frame = 0 

Query: 53  KKKRFRPGTVALREIRNFQKSWNLLIPASCFIRAVKEVSYQLAPQIT-----RWQAEALV 112
           +KKR+RPGT ALREIR +Q+S +LLI    F R V+E+S +     +     RWQ+ AL 
Sbjct: 18  RKKRYRPGTTALREIRKYQRSTDLLIQRLPFSRIVREISSEFVANFSTDVGLRWQSTALQ 77

Query: 113 ALQEAAEDFLVHLFEDTVLCAIHAKRVTIMKKDFELARRLGG 150
            LQEAAE FLVHLFEDT LCAIHAKRVTIM++D +LARR+ G
Sbjct: 78  CLQEAAEAFLVHLFEDTNLCAIHAKRVTIMQRDMQLARRIRG 119

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BLAST of PI0000009 vs. ExPASy Swiss-Prot
Match: Q0MXD1 (Histone H3-like centromeric protein CSE4 OS=Millerozyma farinosa OX=4920 GN=CSE4 PE=3 SV=1)

HSP 1 Score: 111.3 bits (277), Expect = 9.8e-24
Identity = 65/111 (58.56%), Postives = 77/111 (69.37%), Query Frame = 0 

Query: 41  GQAQSSSSRTTKKKKRFRPGTVALREIRNFQKSWNLLIPASCFIRAVKEV--SYQLAPQI 100
           G   +  S  T  K+R+RPGT ALREIR +Q+S  LLI    F R VKEV  +Y  A   
Sbjct: 46  GDPPTIRSTNTTVKRRYRPGTKALREIRRYQRSSELLIRKLPFARLVKEVAENYIGADYG 105

Query: 101 TRWQAEALVALQEAAEDFLVHLFEDTVLCAIHAKRVTIMKKDFELARRLGG 150
            RWQ+ A++ALQEA E FLVHL EDT LCAIHAKRVTIM+KD +LARR+ G
Sbjct: 106 IRWQSNAVLALQEACEAFLVHLLEDTNLCAIHAKRVTIMQKDIQLARRIRG 156

[Close]
BLAST of PI0000009 vs. ExPASy Swiss-Prot
Match: O15819 (Histone H3.3 type a OS=Dictyostelium discoideum OX=44689 GN=H3a PE=1 SV=1)

HSP 1 Score: 109.8 bits (273), Expect = 2.8e-23
Identity = 64/106 (60.38%), Postives = 78/106 (73.58%), Query Frame = 0 

Query: 45  SSSSRTTKKKKRFRPGTVALREIRNFQKSWNLLIPASCFIRAVKEVSYQLAPQITRWQAE 104
           SSSS   KK  RFRPGTVALREIR +QKS +LLI    F R V+E++ +    + R+Q+ 
Sbjct: 33  SSSSGGVKKVHRFRPGTVALREIRKYQKSTDLLIRKLPFQRLVREIAQEFKTDL-RFQSA 92

Query: 105 ALVALQEAAEDFLVHLFEDTVLCAIHAKRVTIMKKDFELARRLGGK 151
           A+ ALQEA+E +LV LFEDT LCAIHAKRVTIM KD  LARR+ G+
Sbjct: 93  AIGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIHLARRIRGE 137

[Close]
BLAST of PI0000009 vs. ExPASy TrEMBL
Match: A0A6J1DTT5 (Histone H3.2 OS=Momordica charantia OX=3673 GN=LOC111023426 PE=3 SV=1)

HSP 1 Score: 255.0 bits (650), Expect = 2.0e-64
Identity = 132/154 (85.71%), Postives = 140/154 (90.91%), Query Frame = 0 

Query: 1   MARARHPPQRKSNRTPSGSGAAQSSPAAPSTPLNGRTQNVGQAQSSSSRTTKKKKRFRPG 60
           MARARHP QR +NR P GSG A SSPA PSTPL GRTQNV QAQS  +RT+ KK+RFRPG
Sbjct: 1   MARARHPAQRNANRKPLGSGVAPSSPAGPSTPLGGRTQNVRQAQSPPARTSGKKRRFRPG 60

Query: 61  TVALREIRNFQKSWNLLIPASCFIRAVKEVSYQLAPQITRWQAEALVALQEAAEDFLVHL 120
           TVALREIR FQK+WNLLIPAS FIRAVKEVSYQLAP+ITRWQAEAL+ALQEAAEDFLVHL
Sbjct: 61  TVALREIRQFQKTWNLLIPASSFIRAVKEVSYQLAPEITRWQAEALIALQEAAEDFLVHL 120

Query: 121 FEDTVLCAIHAKRVTIMKKDFELARRLGGKGRPW 155
           FEDT+LCAIHAKRVTIMKKDFELARRLGGKGRPW
Sbjct: 121 FEDTMLCAIHAKRVTIMKKDFELARRLGGKGRPW 154

[Close]
BLAST of PI0000009 vs. ExPASy TrEMBL
Match: A0A6J1KTZ4 (Histone H3.2 OS=Cucurbita maxima OX=3661 GN=LOC111498182 PE=3 SV=1)

HSP 1 Score: 246.9 bits (629), Expect = 5.5e-62
Identity = 130/154 (84.42%), Postives = 139/154 (90.26%), Query Frame = 0 

Query: 1   MARARHPPQRKSNRTPSGSGAAQSSPAAPSTPLNGRTQNVGQAQSSSSRTTKKKKRFRPG 60
           MARA+HP QR SNR PS +GA+ SS AAPSTPL+GRTQ+  Q QS  SRTT KK+RFRPG
Sbjct: 1   MARAKHPTQRNSNRKPSVAGASPSSSAAPSTPLSGRTQSGRQTQSPLSRTTGKKRRFRPG 60

Query: 61  TVALREIRNFQKSWNLLIPASCFIRAVKEVSYQLAPQITRWQAEALVALQEAAEDFLVHL 120
           TVALREIR  QKSWNLLIPAS FIRAVKEVSYQLAPQ+TRWQAEAL+ALQEAAEDFLVHL
Sbjct: 61  TVALREIRQLQKSWNLLIPASNFIRAVKEVSYQLAPQVTRWQAEALIALQEAAEDFLVHL 120

Query: 121 FEDTVLCAIHAKRVTIMKKDFELARRLGGKGRPW 155
           FEDT+LCAIHAKRVTIMKKDFELARRLGGKGRPW
Sbjct: 121 FEDTMLCAIHAKRVTIMKKDFELARRLGGKGRPW 154

[Close]
BLAST of PI0000009 vs. ExPASy TrEMBL
Match: A0A6J1H6R9 (Histone H3.2 OS=Cucurbita moschata OX=3662 GN=LOC111460630 PE=3 SV=1)

HSP 1 Score: 246.9 bits (629), Expect = 5.5e-62
Identity = 130/154 (84.42%), Postives = 139/154 (90.26%), Query Frame = 0 

Query: 1   MARARHPPQRKSNRTPSGSGAAQSSPAAPSTPLNGRTQNVGQAQSSSSRTTKKKKRFRPG 60
           MARA+HP QR SNR PS +GA+ SS AAPSTPL+GRTQ+  Q QS  SRTT KK+RFRPG
Sbjct: 1   MARAKHPTQRNSNRKPSVAGASPSSSAAPSTPLSGRTQSGRQTQSPLSRTTGKKRRFRPG 60

Query: 61  TVALREIRNFQKSWNLLIPASCFIRAVKEVSYQLAPQITRWQAEALVALQEAAEDFLVHL 120
           TVALREIR  QKSWNLLIPAS FIRAVKEVSYQLAPQ+TRWQAEAL+ALQEAAEDFLVHL
Sbjct: 61  TVALREIRQLQKSWNLLIPASNFIRAVKEVSYQLAPQVTRWQAEALIALQEAAEDFLVHL 120

Query: 121 FEDTVLCAIHAKRVTIMKKDFELARRLGGKGRPW 155
           FEDT+LCAIHAKRVTIMKKDFELARRLGGKGRPW
Sbjct: 121 FEDTMLCAIHAKRVTIMKKDFELARRLGGKGRPW 154

[Close]
BLAST of PI0000009 vs. ExPASy TrEMBL
Match: A0A0A0K4F4 (Histone H3.2 OS=Cucumis sativus OX=3659 GN=Csa_7G328280 PE=3 SV=1)

HSP 1 Score: 240.4 bits (612), Expect = 5.1e-60
Identity = 127/136 (93.38%), Postives = 131/136 (96.32%), Query Frame = 0 

Query: 1   MARARHPPQRKSNRTPSGSGAAQSSPAAPSTPLNGRTQNVGQAQSSSSRTTKKKKRFRPG 60
           MARARHPP+RKSNRTPSGSGAAQSSP APSTPLNGRTQNV QAQ+SSSRT KKKKRFRPG
Sbjct: 1   MARARHPPRRKSNRTPSGSGAAQSSPTAPSTPLNGRTQNVRQAQNSSSRTIKKKKRFRPG 60

Query: 61  TVALREIRNFQKSWNLLIPASCFIRAVKEVSYQLAPQITRWQAEALVALQEAAEDFLVHL 120
           TVAL+EIRN QKSWNLLIPASCFIRAVKEVS QLAPQITRWQAEALVALQEAAEDFLVHL
Sbjct: 61  TVALKEIRNLQKSWNLLIPASCFIRAVKEVSNQLAPQITRWQAEALVALQEAAEDFLVHL 120

Query: 121 FEDTVLCAIHAKRVTI 137
           FEDT+LCAIHAKRVTI
Sbjct: 121 FEDTMLCAIHAKRVTI 136

[Close]
BLAST of PI0000009 vs. ExPASy TrEMBL
Match: A0A1S3CG56 (Histone H3.2 OS=Cucumis melo OX=3656 GN=LOC103500538 PE=3 SV=1)

HSP 1 Score: 197.6 bits (501), Expect = 3.8e-47
Identity = 106/133 (79.70%), Postives = 111/133 (83.46%), Query Frame = 0 

Query: 24  SSPAAPSTPLNGRTQNVGQAQSSSSRTTKKKK--RFRPGTVALREIRNFQKSWNLLIPAS 83
           S   +PS P +       + Q SS  T K K+  RFRPGTVALREIRN QKSWNLLIPAS
Sbjct: 66  SCTVSPSCPFDATQWENTKCQESSKPTIKNKEKIRFRPGTVALREIRNLQKSWNLLIPAS 125

Query: 84  CFIRAVKEVSYQLAPQITRWQAEALVALQEAAEDFLVHLFEDTVLCAIHAKRVTIMKKDF 143
           CFIRAVKEVS QLAPQITRWQAEALVALQEAAEDFLVHLFEDT+LCAIHAKRVTIMKKDF
Sbjct: 126 CFIRAVKEVSNQLAPQITRWQAEALVALQEAAEDFLVHLFEDTMLCAIHAKRVTIMKKDF 185

Query: 144 ELARRLGGKGRPW 155
           ELARRLGGKGRPW
Sbjct: 186 ELARRLGGKGRPW 198

[Close]
BLAST of PI0000009 vs. NCBI nr
Match: XP_011659153.1 (histone H3-like centromeric protein HTR12 isoform X2 [Cucumis sativus] >KAE8646217.1 hypothetical protein Csa_016289 [Cucumis sativus])

HSP 1 Score: 279.3 bits (713), Expect = 2.1e-71
Identity = 145/154 (94.16%), Postives = 149/154 (96.75%), Query Frame = 0 

Query: 1   MARARHPPQRKSNRTPSGSGAAQSSPAAPSTPLNGRTQNVGQAQSSSSRTTKKKKRFRPG 60
           MARARHPP+RKSNRTPSGSGAAQSSP APSTPLNGRTQNV QAQ+SSSRT KKKKRFRPG
Sbjct: 1   MARARHPPRRKSNRTPSGSGAAQSSPTAPSTPLNGRTQNVRQAQNSSSRTIKKKKRFRPG 60

Query: 61  TVALREIRNFQKSWNLLIPASCFIRAVKEVSYQLAPQITRWQAEALVALQEAAEDFLVHL 120
           TVAL+EIRN QKSWNLLIPASCFIRAVKEVS QLAPQITRWQAEALVALQEAAEDFLVHL
Sbjct: 61  TVALKEIRNLQKSWNLLIPASCFIRAVKEVSNQLAPQITRWQAEALVALQEAAEDFLVHL 120

Query: 121 FEDTVLCAIHAKRVTIMKKDFELARRLGGKGRPW 155
           FEDT+LCAIHAKRVTIMKKDFELARRLGGKGRPW
Sbjct: 121 FEDTMLCAIHAKRVTIMKKDFELARRLGGKGRPW 154

[Close]
BLAST of PI0000009 vs. NCBI nr
Match: XP_038896752.1 (histone H3-like centromeric protein HTR12 [Benincasa hispida])

HSP 1 Score: 278.9 bits (712), Expect = 2.7e-71
Identity = 145/154 (94.16%), Postives = 149/154 (96.75%), Query Frame = 0 

Query: 1   MARARHPPQRKSNRTPSGSGAAQSSPAAPSTPLNGRTQNVGQAQSSSSRTTKKKKRFRPG 60
           MARARHPPQRKSNR PSG+GAAQSSPAAPSTPL+GRTQNV QAQSS  RTTKKKKRFRPG
Sbjct: 1   MARARHPPQRKSNRMPSGTGAAQSSPAAPSTPLSGRTQNVEQAQSSPLRTTKKKKRFRPG 60

Query: 61  TVALREIRNFQKSWNLLIPASCFIRAVKEVSYQLAPQITRWQAEALVALQEAAEDFLVHL 120
           TVALREIR+ QKSWNLLIPASCFIRAVKEVSYQLAPQITRWQAEALVALQEAAEDFLVHL
Sbjct: 61  TVALREIRSLQKSWNLLIPASCFIRAVKEVSYQLAPQITRWQAEALVALQEAAEDFLVHL 120

Query: 121 FEDTVLCAIHAKRVTIMKKDFELARRLGGKGRPW 155
           FEDT+LCAIHAKRVTIMKKDFELARRLGGKGRPW
Sbjct: 121 FEDTMLCAIHAKRVTIMKKDFELARRLGGKGRPW 154

[Close]
BLAST of PI0000009 vs. NCBI nr
Match: XP_022156549.1 (histone H3-like centromeric protein HTR12 [Momordica charantia])

HSP 1 Score: 255.0 bits (650), Expect = 4.2e-64
Identity = 132/154 (85.71%), Postives = 140/154 (90.91%), Query Frame = 0 

Query: 1   MARARHPPQRKSNRTPSGSGAAQSSPAAPSTPLNGRTQNVGQAQSSSSRTTKKKKRFRPG 60
           MARARHP QR +NR P GSG A SSPA PSTPL GRTQNV QAQS  +RT+ KK+RFRPG
Sbjct: 1   MARARHPAQRNANRKPLGSGVAPSSPAGPSTPLGGRTQNVRQAQSPPARTSGKKRRFRPG 60

Query: 61  TVALREIRNFQKSWNLLIPASCFIRAVKEVSYQLAPQITRWQAEALVALQEAAEDFLVHL 120
           TVALREIR FQK+WNLLIPAS FIRAVKEVSYQLAP+ITRWQAEAL+ALQEAAEDFLVHL
Sbjct: 61  TVALREIRQFQKTWNLLIPASSFIRAVKEVSYQLAPEITRWQAEALIALQEAAEDFLVHL 120

Query: 121 FEDTVLCAIHAKRVTIMKKDFELARRLGGKGRPW 155
           FEDT+LCAIHAKRVTIMKKDFELARRLGGKGRPW
Sbjct: 121 FEDTMLCAIHAKRVTIMKKDFELARRLGGKGRPW 154

[Close]
BLAST of PI0000009 vs. NCBI nr
Match: XP_022959605.1 (histone H3-like centromeric protein HTR12 [Cucurbita moschata] >XP_023005091.1 histone H3-like centromeric protein HTR12 [Cucurbita maxima] >XP_023514272.1 histone H3-like centromeric protein HTR12 [Cucurbita pepo subsp. pepo] >KAG6592914.1 histone H3-like centromeric protein HTR12, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 246.9 bits (629), Expect = 1.1e-61
Identity = 130/154 (84.42%), Postives = 139/154 (90.26%), Query Frame = 0 

Query: 1   MARARHPPQRKSNRTPSGSGAAQSSPAAPSTPLNGRTQNVGQAQSSSSRTTKKKKRFRPG 60
           MARA+HP QR SNR PS +GA+ SS AAPSTPL+GRTQ+  Q QS  SRTT KK+RFRPG
Sbjct: 1   MARAKHPTQRNSNRKPSVAGASPSSSAAPSTPLSGRTQSGRQTQSPLSRTTGKKRRFRPG 60

Query: 61  TVALREIRNFQKSWNLLIPASCFIRAVKEVSYQLAPQITRWQAEALVALQEAAEDFLVHL 120
           TVALREIR  QKSWNLLIPAS FIRAVKEVSYQLAPQ+TRWQAEAL+ALQEAAEDFLVHL
Sbjct: 61  TVALREIRQLQKSWNLLIPASNFIRAVKEVSYQLAPQVTRWQAEALIALQEAAEDFLVHL 120

Query: 121 FEDTVLCAIHAKRVTIMKKDFELARRLGGKGRPW 155
           FEDT+LCAIHAKRVTIMKKDFELARRLGGKGRPW
Sbjct: 121 FEDTMLCAIHAKRVTIMKKDFELARRLGGKGRPW 154

[Close]
BLAST of PI0000009 vs. NCBI nr
Match: XP_011659152.1 (histone H3-1 isoform X1 [Cucumis sativus])

HSP 1 Score: 240.4 bits (612), Expect = 1.1e-59
Identity = 127/136 (93.38%), Postives = 131/136 (96.32%), Query Frame = 0 

Query: 1   MARARHPPQRKSNRTPSGSGAAQSSPAAPSTPLNGRTQNVGQAQSSSSRTTKKKKRFRPG 60
           MARARHPP+RKSNRTPSGSGAAQSSP APSTPLNGRTQNV QAQ+SSSRT KKKKRFRPG
Sbjct: 1   MARARHPPRRKSNRTPSGSGAAQSSPTAPSTPLNGRTQNVRQAQNSSSRTIKKKKRFRPG 60

Query: 61  TVALREIRNFQKSWNLLIPASCFIRAVKEVSYQLAPQITRWQAEALVALQEAAEDFLVHL 120
           TVAL+EIRN QKSWNLLIPASCFIRAVKEVS QLAPQITRWQAEALVALQEAAEDFLVHL
Sbjct: 61  TVALKEIRNLQKSWNLLIPASCFIRAVKEVSNQLAPQITRWQAEALVALQEAAEDFLVHL 120

Query: 121 FEDTVLCAIHAKRVTI 137
           FEDT+LCAIHAKRVTI
Sbjct: 121 FEDTMLCAIHAKRVTI 136

[Close]
BLAST of PI0000009 vs. TAIR 10
Match: AT1G01370.1 (Histone superfamily protein )

HSP 1 Score: 153.3 bits (386), Expect = 1.6e-37
Identity = 93/178 (52.25%), Postives = 118/178 (66.29%), Query Frame = 0 

Query: 1   MARARHPPQRKSNRTPSGSGAAQSSPAA---------------------PST-PLNGRTQ 60
           MAR +H   R   R  + +  A SS AA                     P+T P  G  +
Sbjct: 1   MARTKHRVTRSQPRNQTDAAGASSSQAAGPTTTPTRRGGEGGDNTQQTNPTTSPATGTRR 60

Query: 61  NVGQAQSSSSRTTKKKK-RFRPGTVALREIRNFQKSWNLLIPASCFIRAVKEVSYQLA-P 120
              +++ +  R ++KK  R+RPGTVAL+EIR+FQK  NLLIPA+ FIR V+ +++ LA P
Sbjct: 61  GAKRSRQAMPRGSQKKSYRYRPGTVALKEIRHFQKQTNLLIPAASFIREVRSITHMLAPP 120

Query: 121 QITRWQAEALVALQEAAEDFLVHLFEDTVLCAIHAKRVTIMKKDFELARRLGGKGRPW 155
           QI RW AEALVALQEAAED+LV LF D++LCAIHA+RVT+M+KDFELARRLGGKGRPW
Sbjct: 121 QINRWTAEALVALQEAAEDYLVGLFSDSMLCAIHARRVTLMRKDFELARRLGGKGRPW 178

[Close]
BLAST of PI0000009 vs. TAIR 10
Match: AT1G01370.2 (Histone superfamily protein )

HSP 1 Score: 153.3 bits (386), Expect = 1.6e-37
Identity = 93/178 (52.25%), Postives = 118/178 (66.29%), Query Frame = 0 

Query: 1   MARARHPPQRKSNRTPSGSGAAQSSPAA---------------------PST-PLNGRTQ 60
           MAR +H   R   R  + +  A SS AA                     P+T P  G  +
Sbjct: 1   MARTKHRVTRSQPRNQTDAAGASSSQAAGPTTTPTRRGGEGGDNTQQTNPTTSPATGTRR 60

Query: 61  NVGQAQSSSSRTTKKKK-RFRPGTVALREIRNFQKSWNLLIPASCFIRAVKEVSYQLA-P 120
              +++ +  R ++KK  R+RPGTVAL+EIR+FQK  NLLIPA+ FIR V+ +++ LA P
Sbjct: 61  GAKRSRQAMPRGSQKKSYRYRPGTVALKEIRHFQKQTNLLIPAASFIREVRSITHMLAPP 120

Query: 121 QITRWQAEALVALQEAAEDFLVHLFEDTVLCAIHAKRVTIMKKDFELARRLGGKGRPW 155
           QI RW AEALVALQEAAED+LV LF D++LCAIHA+RVT+M+KDFELARRLGGKGRPW
Sbjct: 121 QINRWTAEALVALQEAAEDYLVGLFSDSMLCAIHARRVTLMRKDFELARRLGGKGRPW 178

[Close]
BLAST of PI0000009 vs. TAIR 10
Match: AT1G19890.1 (male-gamete-specific histone H3 )

HSP 1 Score: 108.2 bits (269), Expect = 5.9e-24
Identity = 60/99 (60.61%), Postives = 75/99 (75.76%), Query Frame = 0 

Query: 52  KKKKRFRPGTVALREIRNFQKSWNLLIPASCFIRAVKEVSYQLAPQITRWQAEALVALQE 111
           K+  RFRPGTVALREIR +QKS +LLI    F R V+E++      + R+Q+ A++ALQE
Sbjct: 38  KRAHRFRPGTVALREIRKYQKSTDLLIRKLPFQRLVREIAQDFKVDL-RFQSHAVLALQE 97

Query: 112 AAEDFLVHLFEDTVLCAIHAKRVTIMKKDFELARRLGGK 151
           AAE +LV LFEDT LCAIHAKRVTIM KD +LARR+ G+
Sbjct: 98  AAEAYLVGLFEDTNLCAIHAKRVTIMSKDIQLARRIRGE 135

[Close]
BLAST of PI0000009 vs. TAIR 10
Match: AT4G40030.1 (Histone superfamily protein )

HSP 1 Score: 107.8 bits (268), Expect = 7.7e-24
Identity = 66/118 (55.93%), Postives = 82/118 (69.49%), Query Frame = 0 

Query: 36  RTQNVGQAQSSSSRTT---KKKKRFRPGTVALREIRNFQKSWNLLIPASCFIRAVKEVSY 95
           R Q   +A   S+ TT   KK  R+RPGTVALREIR +QKS  LLI    F R V+E++ 
Sbjct: 18  RKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQ 77

Query: 96  QLAPQITRWQAEALVALQEAAEDFLVHLFEDTVLCAIHAKRVTIMKKDFELARRLGGK 151
                + R+Q+ A++ALQEAAE +LV LFEDT LCAIHAKRVTIM KD +LARR+ G+
Sbjct: 78  DFKTDL-RFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGE 134

[Close]
BLAST of PI0000009 vs. TAIR 10
Match: AT4G40040.1 (Histone superfamily protein )

HSP 1 Score: 107.8 bits (268), Expect = 7.7e-24
Identity = 66/118 (55.93%), Postives = 82/118 (69.49%), Query Frame = 0 

Query: 36  RTQNVGQAQSSSSRTT---KKKKRFRPGTVALREIRNFQKSWNLLIPASCFIRAVKEVSY 95
           R Q   +A   S+ TT   KK  R+RPGTVALREIR +QKS  LLI    F R V+E++ 
Sbjct: 18  RKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQ 77

Query: 96  QLAPQITRWQAEALVALQEAAEDFLVHLFEDTVLCAIHAKRVTIMKKDFELARRLGGK 151
                + R+Q+ A++ALQEAAE +LV LFEDT LCAIHAKRVTIM KD +LARR+ G+
Sbjct: 78  DFKTDL-RFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGE 134

The following BLAST results are available for this feature:
BLAST of PI0000009 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q8RVQ92.2e-3652.25Histone H3-like centromeric protein HTR12 OS=Arabidopsis thaliana OX=3702 GN=HTR... [more]
Q7RXR32.1e-2647.95Histone H3-like centromeric protein hH3v OS=Neurospora crassa (strain ATCC 24698... [more]
Q9Y8128.8e-2559.80Histone H3-like centromeric protein cnp1 OS=Schizosaccharomyces pombe (strain 97... [more]
Q0MXD19.8e-2458.56Histone H3-like centromeric protein CSE4 OS=Millerozyma farinosa OX=4920 GN=CSE4... [more]
O158192.8e-2360.38Histone H3.3 type a OS=Dictyostelium discoideum OX=44689 GN=H3a PE=1 SV=1[more]
BLAST of PI0000009 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1DTT52.0e-6485.71Histone H3.2 OS=Momordica charantia OX=3673 GN=LOC111023426 PE=3 SV=1[more]
A0A6J1KTZ45.5e-6284.42Histone H3.2 OS=Cucurbita maxima OX=3661 GN=LOC111498182 PE=3 SV=1[more]
A0A6J1H6R95.5e-6284.42Histone H3.2 OS=Cucurbita moschata OX=3662 GN=LOC111460630 PE=3 SV=1[more]
A0A0A0K4F45.1e-6093.38Histone H3.2 OS=Cucumis sativus OX=3659 GN=Csa_7G328280 PE=3 SV=1[more]
A0A1S3CG563.8e-4779.70Histone H3.2 OS=Cucumis melo OX=3656 GN=LOC103500538 PE=3 SV=1[more]
BLAST of PI0000009 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_011659153.12.1e-7194.16histone H3-like centromeric protein HTR12 isoform X2 [Cucumis sativus] >KAE86462... [more]
XP_038896752.12.7e-7194.16histone H3-like centromeric protein HTR12 [Benincasa hispida][more]
XP_022156549.14.2e-6485.71histone H3-like centromeric protein HTR12 [Momordica charantia][more]
XP_022959605.11.1e-6184.42histone H3-like centromeric protein HTR12 [Cucurbita moschata] >XP_023005091.1 h... [more]
XP_011659152.11.1e-5993.38histone H3-1 isoform X1 [Cucumis sativus][more]
BLAST of PI0000009 vs. TAIR 10
Match NameE-valueIdentityDescription
AT1G01370.11.6e-3752.25Histone superfamily protein [more]
AT1G01370.21.6e-3752.25Histone superfamily protein [more]
AT1G19890.15.9e-2460.61male-gamete-specific histone H3 [more]
AT4G40030.17.7e-2455.93Histone superfamily protein [more]
AT4G40040.17.7e-2455.93Histone superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000164Histone H3/CENP-APRINTSPR00622HISTONEH3coord: 96..114
score: 48.51
coord: 130..151
score: 66.4
coord: 49..70
score: 63.14
coord: 114..130
score: 75.45
IPR000164Histone H3/CENP-ASMARTSM00428h35coord: 49..152
e-value: 2.5E-43
score: 160.0
IPR000164Histone H3/CENP-APANTHERPTHR11426HISTONE H3coord: 10..154
IPR007125Histone H2A/H2B/H3PFAMPF00125Histonecoord: 30..147
e-value: 2.2E-35
score: 121.9
IPR009072Histone-foldGENE3D1.10.20.10Histone, subunit Acoord: 2..151
e-value: 7.7E-45
score: 154.1
IPR009072Histone-foldSUPERFAMILY47113Histone-foldcoord: 28..148
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 11..48
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..59
NoneNo IPR availablePANTHERPTHR11426:SF223HISTONE H3-LIKE CENTROMERIC PROTEIN HTR12coord: 10..154

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
PI0000009.1PI0000009.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0051321 meiotic cell cycle
biological_process GO:0006996 organelle organization
cellular_component GO:0000786 nucleosome
cellular_component GO:0005634 nucleus
molecular_function GO:0003677 DNA binding
molecular_function GO:0046982 protein heterodimerization activity