Moctig00278g120 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moctig00278g120
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	Integrase catalytic domain-containing protein
Location	tig00000278_pilon: 28672 .. 30015 (-)
RNA-Seq Expression	Moctig00278g120
Synteny	Moctig00278g120

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTAGAATCAGTCGGGGGCCTGAGAGGCGGTGGTTTACCCTGTGGCGGATGTCAGCGGTTCGAGTCCGCTTATCTCCAACTCGTGAACTTAGCCGATACAAAGCTATATGATAGCACTCCATTTTTCCGATTCGGCAGTTCGATCTATGATTTATCATTCATGGACGTTGATAAGATCCTTCCATTTAGCAGCACCTTAGGATGGCATAGCCTTAAAGTTAAGGGCGAGGTTCAAACGAAGAAAGGCTTACGGTGGATACCTAGGCACCCAGAGACGAGGAAGGGCGTAGTAAGCGACGAAATGCTTCGGGGAGTTGAAAATAAGCGTAGATCCGGAGATTCCCGAATAGGTCAACCTTTCAAACTGCTGCTGAATCCATGGGCAGGCAAGAGACAACCTGGCGAACTGAAACATCTTAGTAGCCAGAGGAAAAGAAAGCAAAAGCGATTCCCGTAGTAGCGGCGAGCGAAATGGGAGCAGCCTAAACCGTGAAAACGGGGTTGTGGGAGAGCAATACAAGCGTCGTGCTGCTAGGCGAAGCGGTGGAGTGCTGCACCCTAGATGGCGAGAGTCCAGTAGCCGAAAGCATCACTAGCTTACGCTCTGACCCGAGTAGCATGGGGCACGTGGAATCCCGTGTGAATCAGCAAGGACCACCTTGCAAGGCTAAATACTCCTGGGTGACCGATAGTGAAGTAGTACCGTGAGGGAAGGGTGAAAAGAACCCCCATCGGGGAGTGAAATAGAACATGAAACCGTAAGCTTCCAAGCAGTGGGAGGAGACCAGGACTCTGACCGCGTGCCTGTTGAAGAATGAGCCGGCGACTCATAGGCAGTGGCTTGGTTAAGGGAACCCACCGGAGCCGTAGCGAAAGCGAGTCTTCATGGGGCAATTGTCACTGCTTATGGACCCGAACCTGGGTGATCTATCCATGACCAGGATGAAGCTTGGGTGAAACTAAGTGGAGGTCCGAACCGACTGATGTTGAAGAATCAGCGGATGAGTTGTGGTTAGGGGTGAAATGCCACTCGAACCCAGAGCTAGCTGGTTCTCCCCGAAATGCGTTGAGGCGCAGCAGTTGACTGGACATCTAGGGGTAAAGCACTGTTTCGGTGCGGGCCGCGAGAGCGGTACCAAATCGAGGCAAACTCTGAATACTAGATATGATCTCAAAATAACAGGGGTCAAGGTCGGCCAGTGAGACGATGGGGGATAAGCTTCATCGTCGAGAGGGAAACAGCCCGGATCACCAGCTAAGGCCCCTAAATGACCGCTCAGTGATAAAGGAGGTAGGGGTGCAGAGACAGCCAGGAGGTTTGCCTAGAAGCAGCCACCCTTGA

mRNA sequence

ATGGTAGAATCAGTCGGGGGCCTGAGAGGCGGTGGTTTACCCTGTGGCGGATGTCAGCGGTTCGAGTCCGCTTATCTCCAACTCGTGAACTTAGCCGATACAAAGCTATATGATAGCACTCCATTTTTCCGATTCGGCAGTTCGATCTATGATTTATCATTCATGGACGTTGATAAGATCCTTCCATTTAGCAGCACCTTAGGATGGCATAGCCTTAAAGTTAAGGGCGAGGTTCAAACGAAGAAAGGCTTACGGTGGATACCTAGGCACCCAGAGACGAGGAAGGGCGTAGTAAGCGACGAAATGCTTCGGGGAGTTGAAAATAAGCGTAGATCCGGAGATTCCCGAATAGGCGAAGCGGTGGAGTGCTGCACCCTAGATGGCGAGAGTCCAGTAGCCGAAAGCATCACTAGCTTACGCTCTGACCCGAGTAGCATGGGGCACGGGTCAAGGTCGGCCAGTGAGACGATGGGGGATAAGCTTCATCGTCGAGAGGGAAACAGCCCGGATCACCAGCTAAGGCCCCTAAATGACCGCTCAGTGATAAAGGAGGTAGGGGTGCAGAGACAGCCAGGAGGTTTGCCTAGAAGCAGCCACCCTTGA

Coding sequence (CDS)

ATGGTAGAATCAGTCGGGGGCCTGAGAGGCGGTGGTTTACCCTGTGGCGGATGTCAGCGGTTCGAGTCCGCTTATCTCCAACTCGTGAACTTAGCCGATACAAAGCTATATGATAGCACTCCATTTTTCCGATTCGGCAGTTCGATCTATGATTTATCATTCATGGACGTTGATAAGATCCTTCCATTTAGCAGCACCTTAGGATGGCATAGCCTTAAAGTTAAGGGCGAGGTTCAAACGAAGAAAGGCTTACGGTGGATACCTAGGCACCCAGAGACGAGGAAGGGCGTAGTAAGCGACGAAATGCTTCGGGGAGTTGAAAATAAGCGTAGATCCGGAGATTCCCGAATAGGCGAAGCGGTGGAGTGCTGCACCCTAGATGGCGAGAGTCCAGTAGCCGAAAGCATCACTAGCTTACGCTCTGACCCGAGTAGCATGGGGCACGGGTCAAGGTCGGCCAGTGAGACGATGGGGGATAAGCTTCATCGTCGAGAGGGAAACAGCCCGGATCACCAGCTAAGGCCCCTAAATGACCGCTCAGTGATAAAGGAGGTAGGGGTGCAGAGACAGCCAGGAGGTTTGCCTAGAAGCAGCCACCCTTGA

Protein sequence

MVESVGGLRGGGLPCGGCQRFESAYLQLVNLADTKLYDSTPFFRFGSSIYDLSFMDVDKILPFSSTLGWHSLKVKGEVQTKKGLRWIPRHPETRKGVVSDEMLRGVENKRRSGDSRIGEAVECCTLDGESPVAESITSLRSDPSSMGHGSRSASETMGDKLHRREGNSPDHQLRPLNDRSVIKEVGVQRQPGGLPRSSHP

Homology

[Close]

BLAST of Moctig00278g120 vs. NCBI nr
Match: CAD5336145.1 (unnamed protein product [Arabidopsis thaliana])

HSP 1 Score: 285.8 bits (730), Expect = 2.9e-73
Identity = 150/186 (80.65%), Postives = 154/186 (82.80%), Query Frame = 0


Query: 1   MVESVGGLRGGGLPCGGCQRFESAYLQLVNLADTKLYDSTPFFRFGSSIYDLSFMDVDKI 60
           MVESV GL GGGLPCGGCQRFESAYLQLVNLADTKLYDST FFRFGSSIYD SFMDVDKI
Sbjct: 221 MVESVRGLIGGGLPCGGCQRFESAYLQLVNLADTKLYDSTQFFRFGSSIYDFSFMDVDKI 280

Query: 61  LPFSSTLGWHSLKVKGEVQTKKGLRWIPRHPETRKGVVSDEMLRGVENKRRSGDSRIGEA 120
            PFSSTLGWHSLKVKGEVQT+KGLRWIPRHPETRKGVVSDEMLRGVENKRRSGDSRIG A
Sbjct: 281 FPFSSTLGWHSLKVKGEVQTRKGLRWIPRHPETRKGVVSDEMLRGVENKRRSGDSRIGAA 340

Query: 121 VECCTLDGESPVAESITSLRSDPSSMGHG-SRSASETMGDKLHRREGNSPDHQLRPLNDR 180
           V                    D +S G    RSASET+GDKLHRREGNSPDHQLRPLNDR
Sbjct: 341 V--------------------DWTSRGKALFRSASETVGDKLHRREGNSPDHQLRPLNDR 386

Query: 181 SVIKEV 186
           SVIKE+
Sbjct: 401 SVIKEM 386

[Close]

BLAST of Moctig00278g120 vs. NCBI nr
Match: CAD5336141.1 (unnamed protein product [Arabidopsis thaliana])

HSP 1 Score: 285.8 bits (730), Expect = 2.9e-73
Identity = 150/186 (80.65%), Postives = 154/186 (82.80%), Query Frame = 0


Query: 1   MVESVGGLRGGGLPCGGCQRFESAYLQLVNLADTKLYDSTPFFRFGSSIYDLSFMDVDKI 60
           MVESV GL GGGLPCGGCQRFESAYLQLVNLADTKLYDST FFRFGSSIYD SFMDVDKI
Sbjct: 135 MVESVRGLIGGGLPCGGCQRFESAYLQLVNLADTKLYDSTQFFRFGSSIYDFSFMDVDKI 194

Query: 61  LPFSSTLGWHSLKVKGEVQTKKGLRWIPRHPETRKGVVSDEMLRGVENKRRSGDSRIGEA 120
            PFSSTLGWHSLKVKGEVQT+KGLRWIPRHPETRKGVVSDEMLRGVENKRRSGDSRIG A
Sbjct: 195 FPFSSTLGWHSLKVKGEVQTRKGLRWIPRHPETRKGVVSDEMLRGVENKRRSGDSRIGAA 254

Query: 121 VECCTLDGESPVAESITSLRSDPSSMGHG-SRSASETMGDKLHRREGNSPDHQLRPLNDR 180
           V                    D +S G    RSASET+GDKLHRREGNSPDHQLRPLNDR
Sbjct: 255 V--------------------DWTSRGKALFRSASETVGDKLHRREGNSPDHQLRPLNDR 300

Query: 181 SVIKEV 186
           SVIKE+
Sbjct: 315 SVIKEM 300

[Close]

BLAST of Moctig00278g120 vs. NCBI nr
Match: CAD5336140.1 (unnamed protein product [Arabidopsis thaliana] >CAD5336144.1 unnamed protein product [Arabidopsis thaliana])

HSP 1 Score: 285.8 bits (730), Expect = 2.9e-73
Identity = 150/186 (80.65%), Postives = 154/186 (82.80%), Query Frame = 0


Query: 1   MVESVGGLRGGGLPCGGCQRFESAYLQLVNLADTKLYDSTPFFRFGSSIYDLSFMDVDKI 60
           MVESV GL GGGLPCGGCQRFESAYLQLVNLADTKLYDST FFRFGSSIYD SFMDVDKI
Sbjct: 135 MVESVRGLIGGGLPCGGCQRFESAYLQLVNLADTKLYDSTQFFRFGSSIYDFSFMDVDKI 194

Query: 61  LPFSSTLGWHSLKVKGEVQTKKGLRWIPRHPETRKGVVSDEMLRGVENKRRSGDSRIGEA 120
            PFSSTLGWHSLKVKGEVQT+KGLRWIPRHPETRKGVVSDEMLRGVENKRRSGDSRIG A
Sbjct: 195 FPFSSTLGWHSLKVKGEVQTRKGLRWIPRHPETRKGVVSDEMLRGVENKRRSGDSRIGAA 254

Query: 121 VECCTLDGESPVAESITSLRSDPSSMGHG-SRSASETMGDKLHRREGNSPDHQLRPLNDR 180
           V                    D +S G    RSASET+GDKLHRREGNSPDHQLRPLNDR
Sbjct: 255 V--------------------DWTSRGKALFRSASETVGDKLHRREGNSPDHQLRPLNDR 300

Query: 181 SVIKEV 186
           SVIKE+
Sbjct: 315 SVIKEM 300

[Close]

BLAST of Moctig00278g120 vs. NCBI nr
Match: KAG7528872.1 (hypothetical protein ISN44_Un153g000040 [Arabidopsis suecica] >KAG7528886.1 hypothetical protein ISN44_Un153g000180 [Arabidopsis suecica] >KAG7529053.1 hypothetical protein ISN45_Un101g000060 [Arabidopsis thaliana x Arabidopsis arenosa] >KAG7529068.1 hypothetical protein ISN45_Un101g000220 [Arabidopsis thaliana x Arabidopsis arenosa])

HSP 1 Score: 283.1 bits (723), Expect = 1.9e-72
Identity = 140/148 (94.59%), Postives = 141/148 (95.27%), Query Frame = 0


Query: 1   MVESVGGLRGGGLPCGGCQRFESAYLQLVNLADTKLYDSTPFFRFGSSIYDLSFMDVDKI 60
           MVESV GL GGGLPCGGCQRFESAYLQLVNLADTKLYDST FFRFGSSIYD SFMDVDKI
Sbjct: 126 MVESVRGLIGGGLPCGGCQRFESAYLQLVNLADTKLYDSTQFFRFGSSIYDFSFMDVDKI 185

Query: 61  LPFSSTLGWHSLKVKGEVQTKKGLRWIPRHPETRKGVVSDEMLRGVENKRRSGDSRIGEA 120
            PFSSTLGWHSLKVKGEVQT+KGLRWIPRHPETRKGVVSDEMLRGVENKRRSGDSRIGEA
Sbjct: 186 FPFSSTLGWHSLKVKGEVQTRKGLRWIPRHPETRKGVVSDEMLRGVENKRRSGDSRIGEA 245

Query: 121 VECCTLDGESPVAESITSLRSDPSSMGH 149
           VEC TLDGESPVAESITSL SDPSSMGH
Sbjct: 246 VECRTLDGESPVAESITSLCSDPSSMGH 273

[Close]

BLAST of Moctig00278g120 vs. NCBI nr
Match: CAA7013176.1 (unnamed protein product [Microthlaspi erraticum] >CAA7013181.1 unnamed protein product [Microthlaspi erraticum] >CAA7014162.1 unnamed protein product [Microthlaspi erraticum] >CAA7019110.1 unnamed protein product [Microthlaspi erraticum] >CAA7022551.1 unnamed protein product [Microthlaspi erraticum])

HSP 1 Score: 283.1 bits (723), Expect = 1.9e-72
Identity = 140/148 (94.59%), Postives = 141/148 (95.27%), Query Frame = 0


Query: 1   MVESVGGLRGGGLPCGGCQRFESAYLQLVNLADTKLYDSTPFFRFGSSIYDLSFMDVDKI 60
           MVESV GL GGGLPCGGCQRFESAYLQLVNLADTKLYDST FFRFGSSIYD SFMDVDKI
Sbjct: 1   MVESVRGLIGGGLPCGGCQRFESAYLQLVNLADTKLYDSTQFFRFGSSIYDFSFMDVDKI 60

Query: 61  LPFSSTLGWHSLKVKGEVQTKKGLRWIPRHPETRKGVVSDEMLRGVENKRRSGDSRIGEA 120
            PFSSTLGWHSLKVKGEVQT+KGLRWIPRHPETRKGVVSDEMLRGVENKRRSGDSRIGEA
Sbjct: 61  FPFSSTLGWHSLKVKGEVQTRKGLRWIPRHPETRKGVVSDEMLRGVENKRRSGDSRIGEA 120

Query: 121 VECCTLDGESPVAESITSLRSDPSSMGH 149
           VEC TLDGESPVAESITSL SDPSSMGH
Sbjct: 121 VECRTLDGESPVAESITSLCSDPSSMGH 148

[Close]

BLAST of Moctig00278g120 vs. ExPASy TrEMBL
Match: A0A2N9HJU4 (Uncharacterized protein ycf68 OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS40354 PE=3 SV=1)

HSP 1 Score: 340.1 bits (871), Expect = 6.2e-90
Identity = 182/252 (72.22%), Postives = 184/252 (73.02%), Query Frame = 0


Query: 1   MVESVGGLRGGGLPCGGCQRFESAYLQLVNLADTKLYDSTPFFRFGSSIYDLSFMDVDKI 60
           MVESVGGLRGGGLPCGGCQRFESAYLQLVNLADTKLYDST FFRFGSSIYDLSFMDVDKI
Sbjct: 1   MVESVGGLRGGGLPCGGCQRFESAYLQLVNLADTKLYDSTQFFRFGSSIYDLSFMDVDKI 60

Query: 61  LPFSSTLGWHSLKVKGEVQTKKGLRWIPRHPETRKGVVSDEMLRGVENKRRSGDSRIGEA 120
           LPFSSTLGWHSLKVKGEVQT+KGLRWIPRHPETRKGVVSDEMLRGVENKRRSGDSRIGEA
Sbjct: 61  LPFSSTLGWHSLKVKGEVQTRKGLRWIPRHPETRKGVVSDEMLRGVENKRRSGDSRIGEA 120

Query: 121 VECCTLDGESPVAESITSLRSDPSSMGH-------------------------------- 180
           VECCTLDGESPVAESITSLRSDPSSMGH                                
Sbjct: 121 VECCTLDGESPVAESITSLRSDPSSMGHVESRVNQQGPPLAWLREPTGAVAKASLHRAIV 180

Query: 181 -----------------------------------GSRSASETMGDKLHRREGNSPDHQL 186
                                              GSRSASETMGDKLHRREGNSPDHQL
Sbjct: 181 TAYGPEPGGEMPLEPRASWFSPKCVEAQQLTGHLGGSRSASETMGDKLHRREGNSPDHQL 240

[Close]

BLAST of Moctig00278g120 vs. ExPASy TrEMBL
Match: A0A2N9I678 (Uncharacterized protein ycf68 OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS49399 PE=3 SV=1)

HSP 1 Score: 340.1 bits (871), Expect = 6.2e-90
Identity = 182/252 (72.22%), Postives = 184/252 (73.02%), Query Frame = 0


Query: 1   MVESVGGLRGGGLPCGGCQRFESAYLQLVNLADTKLYDSTPFFRFGSSIYDLSFMDVDKI 60
           MVESVGGLRGGGLPCGGCQRFESAYLQLVNLADTKLYDST FFRFGSSIYDLSFMDVDKI
Sbjct: 392 MVESVGGLRGGGLPCGGCQRFESAYLQLVNLADTKLYDSTQFFRFGSSIYDLSFMDVDKI 451

Query: 61  LPFSSTLGWHSLKVKGEVQTKKGLRWIPRHPETRKGVVSDEMLRGVENKRRSGDSRIGEA 120
           LPFSSTLGWHSLKVKGEVQT+KGLRWIPRHPETRKGVVSDEMLRGVENKRRSGDSRIGEA
Sbjct: 452 LPFSSTLGWHSLKVKGEVQTRKGLRWIPRHPETRKGVVSDEMLRGVENKRRSGDSRIGEA 511

Query: 121 VECCTLDGESPVAESITSLRSDPSSMGH-------------------------------- 180
           VECCTLDGESPVAESITSLRSDPSSMGH                                
Sbjct: 512 VECCTLDGESPVAESITSLRSDPSSMGHVESRVNQQGPPLAWLREPTGAVAKASLHRAIV 571

Query: 181 -----------------------------------GSRSASETMGDKLHRREGNSPDHQL 186
                                              GSRSASETMGDKLHRREGNSPDHQL
Sbjct: 572 TAYGPEPGGEMPLEPRASWFSPKCVEAQQLTGHLGGSRSASETMGDKLHRREGNSPDHQL 631

[Close]

BLAST of Moctig00278g120 vs. ExPASy TrEMBL
Match: A0A2N9F5N4 (Uncharacterized protein ycf68 OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS10310 PE=3 SV=1)

HSP 1 Score: 340.1 bits (871), Expect = 6.2e-90
Identity = 182/252 (72.22%), Postives = 184/252 (73.02%), Query Frame = 0


Query: 1   MVESVGGLRGGGLPCGGCQRFESAYLQLVNLADTKLYDSTPFFRFGSSIYDLSFMDVDKI 60
           MVESVGGLRGGGLPCGGCQRFESAYLQLVNLADTKLYDST FFRFGSSIYDLSFMDVDKI
Sbjct: 1   MVESVGGLRGGGLPCGGCQRFESAYLQLVNLADTKLYDSTQFFRFGSSIYDLSFMDVDKI 60

Query: 61  LPFSSTLGWHSLKVKGEVQTKKGLRWIPRHPETRKGVVSDEMLRGVENKRRSGDSRIGEA 120
           LPFSSTLGWHSLKVKGEVQT+KGLRWIPRHPETRKGVVSDEMLRGVENKRRSGDSRIGEA
Sbjct: 61  LPFSSTLGWHSLKVKGEVQTRKGLRWIPRHPETRKGVVSDEMLRGVENKRRSGDSRIGEA 120

Query: 121 VECCTLDGESPVAESITSLRSDPSSMGH-------------------------------- 180
           VECCTLDGESPVAESITSLRSDPSSMGH                                
Sbjct: 121 VECCTLDGESPVAESITSLRSDPSSMGHVESRVNQQGPPLAWLREPTGAVAKASLHRAIV 180

Query: 181 -----------------------------------GSRSASETMGDKLHRREGNSPDHQL 186
                                              GSRSASETMGDKLHRREGNSPDHQL
Sbjct: 181 TAYGPEPGGEMPLEPRASWFSPKCVEAQQLTGHLGGSRSASETMGDKLHRREGNSPDHQL 240

[Close]

BLAST of Moctig00278g120 vs. ExPASy TrEMBL
Match: A0A2N9HP93 (Uncharacterized protein ycf68 OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS41670 PE=3 SV=1)

HSP 1 Score: 340.1 bits (871), Expect = 6.2e-90
Identity = 182/252 (72.22%), Postives = 184/252 (73.02%), Query Frame = 0


Query: 1   MVESVGGLRGGGLPCGGCQRFESAYLQLVNLADTKLYDSTPFFRFGSSIYDLSFMDVDKI 60
           MVESVGGLRGGGLPCGGCQRFESAYLQLVNLADTKLYDST FFRFGSSIYDLSFMDVDKI
Sbjct: 575 MVESVGGLRGGGLPCGGCQRFESAYLQLVNLADTKLYDSTQFFRFGSSIYDLSFMDVDKI 634

Query: 61  LPFSSTLGWHSLKVKGEVQTKKGLRWIPRHPETRKGVVSDEMLRGVENKRRSGDSRIGEA 120
           LPFSSTLGWHSLKVKGEVQT+KGLRWIPRHPETRKGVVSDEMLRGVENKRRSGDSRIGEA
Sbjct: 635 LPFSSTLGWHSLKVKGEVQTRKGLRWIPRHPETRKGVVSDEMLRGVENKRRSGDSRIGEA 694

Query: 121 VECCTLDGESPVAESITSLRSDPSSMGH-------------------------------- 180
           VECCTLDGESPVAESITSLRSDPSSMGH                                
Sbjct: 695 VECCTLDGESPVAESITSLRSDPSSMGHVESRVNQQGPPLAWLREPTGAVAKASLHRAIV 754

Query: 181 -----------------------------------GSRSASETMGDKLHRREGNSPDHQL 186
                                              GSRSASETMGDKLHRREGNSPDHQL
Sbjct: 755 TAYGPEPGGEMPLEPRASWFSPKCVEAQQLTGHLGGSRSASETMGDKLHRREGNSPDHQL 814

[Close]

BLAST of Moctig00278g120 vs. ExPASy TrEMBL
Match: A0A2N9HJZ2 (Uncharacterized protein ycf68 OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS42388 PE=3 SV=1)

HSP 1 Score: 340.1 bits (871), Expect = 6.2e-90
Identity = 182/252 (72.22%), Postives = 184/252 (73.02%), Query Frame = 0


Query: 1   MVESVGGLRGGGLPCGGCQRFESAYLQLVNLADTKLYDSTPFFRFGSSIYDLSFMDVDKI 60
           MVESVGGLRGGGLPCGGCQRFESAYLQLVNLADTKLYDST FFRFGSSIYDLSFMDVDKI
Sbjct: 1   MVESVGGLRGGGLPCGGCQRFESAYLQLVNLADTKLYDSTQFFRFGSSIYDLSFMDVDKI 60

Query: 61  LPFSSTLGWHSLKVKGEVQTKKGLRWIPRHPETRKGVVSDEMLRGVENKRRSGDSRIGEA 120
           LPFSSTLGWHSLKVKGEVQT+KGLRWIPRHPETRKGVVSDEMLRGVENKRRSGDSRIGEA
Sbjct: 61  LPFSSTLGWHSLKVKGEVQTRKGLRWIPRHPETRKGVVSDEMLRGVENKRRSGDSRIGEA 120

Query: 121 VECCTLDGESPVAESITSLRSDPSSMGH-------------------------------- 180
           VECCTLDGESPVAESITSLRSDPSSMGH                                
Sbjct: 121 VECCTLDGESPVAESITSLRSDPSSMGHVESRVNQQGPPLAWLREPTGAVAKASLHRAIV 180

Query: 181 -----------------------------------GSRSASETMGDKLHRREGNSPDHQL 186
                                              GSRSASETMGDKLHRREGNSPDHQL
Sbjct: 181 TAYGPEPGGEMPLEPRASWFSPKCVEAQQLTGHLGGSRSASETMGDKLHRREGNSPDHQL 240

[Close]

BLAST of Moctig00278g120 vs. TAIR 10
Match: AT2G07706.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:ATMG00470.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 56.6 bits (135), Expect = 2.6e-08
Identity = 35/62 (56.45%), Postives = 37/62 (59.68%), Query Frame = 0


Query: 154 SETMGDKLHRR----------EGNSPDHQLRPLNDRSVIKEVGVQRQPGGL------PRS 200
           SET G ++ R           EGNSPDHQLRP N RSVIKEVGVQRQP  L      PRS
Sbjct: 36  SETRGTRVKRTLVTRELLSLGEGNSPDHQLRPPNGRSVIKEVGVQRQPRSLLAAPMPPRS 95

The following BLAST results are available for this feature:

BLAST of Moctig00278g120 vs. NCBI nr


Match Name	E-value	Identity	Description
CAD5336145.1	2.9e-73	80.65	unnamed protein product [Arabidopsis thaliana]	[more]
CAD5336141.1	2.9e-73	80.65	unnamed protein product [Arabidopsis thaliana]	[more]
CAD5336140.1	2.9e-73	80.65	unnamed protein product [Arabidopsis thaliana] >CAD5336144.1 unnamed protein pro...	[more]
KAG7528872.1	1.9e-72	94.59	hypothetical protein ISN44_Un153g000040 [Arabidopsis suecica] >KAG7528886.1 hypo...	[more]
CAA7013176.1	1.9e-72	94.59	unnamed protein product [Microthlaspi erraticum] >CAA7013181.1 unnamed protein p...	[more]

BLAST of Moctig00278g120 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Moctig00278g120 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A2N9HJU4	6.2e-90	72.22	Uncharacterized protein ycf68 OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS40354 PE=3...	[more]
A0A2N9I678	6.2e-90	72.22	Uncharacterized protein ycf68 OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS49399 PE=3...	[more]
A0A2N9F5N4	6.2e-90	72.22	Uncharacterized protein ycf68 OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS10310 PE=3...	[more]
A0A2N9HP93	6.2e-90	72.22	Uncharacterized protein ycf68 OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS41670 PE=3...	[more]
A0A2N9HJZ2	6.2e-90	72.22	Uncharacterized protein ycf68 OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS42388 PE=3...	[more]

BLAST of Moctig00278g120 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G07706.1	2.6e-08	56.45	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 132..152
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 132..200
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 155..178
None	No IPR available	PANTHER	PTHR34890:SF13	YCF68 PROTEIN	coord: 142..182 coord: 6..100
IPR022546	Uncharacterised protein family Ycf68	PANTHER	PTHR34890	FAMILY NOT NAMED	coord: 142..182 coord: 6..100

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moctig00278g120.1	Moctig00278g120.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
cellular_component	GO:0009507	chloroplast
molecular_function	GO:0003676	nucleic acid binding