Moc11g31920 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc11g31920
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	Ribonuclease H
Location	chr11: 23269622 .. 23272927 (-)
RNA-Seq Expression	Moc11g31920
Synteny	Moc11g31920

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTGCTACTTCCTCACCGGCTTGGCCGATGAGACTTTAACAGTAAAACTTGGAGAGAAGGCTCCAGCCACCTTCGCCGAAGTCCTGCAGAAGGCGAAGAAGGTCATTGATGGGCAAGAGCTCCTCCGAACCAAAACTGGCCGACCTGAAAGACAGATCGACCAGAAGAAGTTGACCCAAGAGAAGATGAAGGCTGATTCCAAGTCTTGAGATAAGGGATCGTCCTCTTCCGCCAGCAGAATAGAGTACCGTAGGTCGGAGAGCGGCCCCAGCCGGAACCGACCTTATGAACGGTATACTCTAACCACCATCCCCATCTCCGAGATACTCACGAACATCGAGGAGAGTGGGATGGAAAAGCTCCTCAAGCGACCTGAGAAGCTCCGAGGAGATCCAGAAAAGTGAAACAAAGATAAGTACTGCCGTTTTCATCGCGATCACGGCCACAATACGTCAAGTTGCTGGGAGTTAAAACGTCAGATTGAAGACCTCATTCAAGACGGCTACTTCAAAAAATTCTTGGGCAAACCGAGGTTTAACTCGGTCGAAAAGAAAGAAGAGAGGAAGCATTCAAGAACGCCGCCTTGCTGGGATGATCGACCTGCGGTCATCAACACTATTTTCGGAGGTCCGAGGGGGGCCAGTCCAGAAACAAGAGGAAGGAGCTAGCTCGCGAGGCCAGGAACGAGGTATGCGTCATCAGGGAGCAGAAACCTACTTGCTCCATTACTTTCGGCGATGCCGATCTGGGGGGGGGCCATTTGCCCCATAATGATGCGCTCGTGATCGCCCCTCTCATTGATCACGTTCTGGTCTGAAGAGTACTGATCGATGGAGGCGCATCTGCAAACATCTTGTCCCTCCCAACATATCTAGCGTTGGGATGGACCAGGTCACAATTGAAGAAAAGTCTAACACCCTTGGTTGGATTCTCTGGAGAATCGGTCTCCCCAGAAGGGTGCATTGACTTGCCGGTCACTATCGGACAAGATGCTACCCAAGTAACACAGATGGTCGAGTTCGTGGTGATCGACGGCAGATCGGCTTACAACGCCATTTTCGGGAGACCCATTATCCACTCATTACGGGTCGTCCCCTCCACATTGCATCAAATCTTGAAGTACTCAACCCCGAATGGAGTGGGCACAGTCCGAGGTGAGCAAAAGACCTCACGAGAATGTTATGCATCCGCGCTTAAAGGGTCGGCGGTATACGCCCTGGAAGAACAAACCAGTCATGGCAAGCTGCAAGAATCCGAAGCAGACCTGCCAAAGGAAGGCAAAAGGGAGTTCTCTCCGCCAACAGAAGAGCTCGAGCTTGTTTTTTTACATAGCCCTGAAAAACAAGTATAGGAACCAAGCTGGGGGCCACTGACAGGGAAGAACTGGTCAACTTCCTCAGATCTAACTCGGACGTCTTCGCATGGTCTCACGAGGACATGCCTGGCATCGACCCAAAGATCATGGTGCATCGCCTCAACATAGACCCATCATTTCGACCTGTAAGGCAAAAAAGAAGACCTCTAAATAGGGAGAGGAGTGATGTAATTGTTGAGGAAGTAAACAAACTCTTAAAAGCTGAATATATACGAGAAATTCTGTATCCTGAGTGGCTTTCTAACGTTGTATTAGTTAAAAAATCCAACGGGAAGTGGAGGATGTGCGTGGACTTTACAAATCTAAATAAGGCATGCCCAAAAGATTGCTTCCCCCTTCCGAGGATCGACTAGCTCGTGGATGCAACGGCCGGGCACGAGCTACTCACTTTCATGGATGCCTACTCCGGATACAATCAAATTGAAATGCACTTACCAGACCAAGATCATACCGCGTTTATTACAGACCAAGGTCTGTACTGCTACAAGGTGATGCCTTTTGGCCTAAAGAATGCGGGTGCGACCTACCAAAGGATGGTGAACAAAATGTTTGCTAAGCAGATCGGTCGGAATATGGAAGTGTATGTGGACGACATGCTTGTCAAGAGCAAGCAGTCAAAGTCGCATCTTTCCGATCTGACCGAAGCCTTTGGAGTACCGCGCAAGTACCAAATGAAGTTCAATTCGACCAAGTGTGCTTTTGGAGTCTCTTCGGGGAAATTCCTTGGTTTTATGGTAAACAATCGTGGGATCGAGGCCAATCCAGAGAAGATAAATGCCGTGCTCGAGATGGAGGCACCCAAGACTCTAAAGCAGCTTCAGTGCCTAAATGGCAGGATTGTAGCCCTGAATAGGTTCGTGTCAAGATCAACGGACAAGTGCCTTCCTTTCTTCAAGGTGCTCAGGAAGAAGGGACCGTTTGATTGGACAGTAGAATGTGAGCAAGCACTAGAGCAGTTAAAATACTATCTCTGCTCGACACCTCTACTCGCAAAGCCATTGCCAGGAGAAAAATTCCACTTTTACCTGGCAGTATCTGATAGCGCCGTCAGCTCGGCACTGATCAAGCAGGAGGGTGCGAGCCAAAGCCCCGTTTATTACACCAGTAAGGCCATGACTGAAGCCGAGACCAGATACCCCCAAATGGAGAAGCTGGCCCTCGCATTAGTCACCTCGACCCGAAGACTTAGGCCGTACTTCCAAGCACACACTGTCATAGTACTTACAAACTTGCCCCTGAAGAATATCTTCAGTAAGCCTGAAACATCAGGGCGTCTGATGTAGTGGGCATTGGAATTGAGAGAGTACGACATCCAGTTCGAGCCCAGAACTGCGTTAAAAGGGCAAGCAGTGGCCGATTTTATCGCAGAGCTCACTCTATCACCTCAGTTGGCCAAGTCCGACCTCCCGTGGACGATCTACATTGATGGATCTTCTAACGAGAGAGGGTGCGGGGCAGGAATCTTCTTGCTCGCACCAGAAGGTGAGCGATTCGAGTATGCTCTACGATTCAACTTTCGGACGTCGAATAATGAGGCCGAGTATGAAGCACTCCTGGAAGGCCTGCGCATTGCCAAAGGGCATTGCCAACCACATTAAGGTCTTTAGTGACTCCCAGCTAATCGTAAATCAGATTAAGGAGGAGTACCAAACGAAGGACCCCCGGATGGAAAAATATCTAAAGCAAGGTCAGATCGTACCTCGCCCATTTTGGGACTTACGAGGTGAGTCAAGTTCCAAGATCTGAGAATTCTAATGCGGATGCCTTAGCCAAATTGGCATCAGCATATGAGACCGACCTGGCTAGATCGGTCCCGGTCGAGATCTTGGACACTCCTTCAATCTTGGAGCCAGATGTGATGGAGGTTGATACTCTATCACCCTCTTGGATGGACCGAATCGTGGAGTTCATCAAAGGAAGTCCACCGTAA

mRNA sequence

ATGTGCTACTTCCTCACCGGCTTGGCCGATGAGACTTTAACAGTAAAACTTGGAGAGAAGGCTCCAGCCACCTTCGCCGAAGTCCTGCAGAAGGCGAAGAAGGTCATTGATGGGCAAGAGCTCCTCCGAACCAAAACTGGCCGACCTGAAAGACAGATCGACCAGAAGAACAGAATAGAGTACCGTAGGTCGGAGAGCGGCCCCAGCCGGAACCGACCTTATGAACGGTATACTCTAACCACCATCCCCATCTCCGAGATACTCACGAACATCGAGGAGAGTGGGATGGAAAAGCTCCTCAAGCGACCTGAGAAGCTCCGAGGAGATCCAGAAAAATTGAAGACCTCATTCAAGACGGCTACTTCAAAAAATTCTTGGGCAAACCGAGGTTTAACTCGGTCGAAAAGAAAGAAGAGAGGAAGCATTCAAGAACGCCGCCTTGCTGGGATGATCGACCTGCGGTCATCAACACTATTTTCGGAGGTCCGAGGGGGGCCAGTCCAGAAACAAGAGGAAGGAGCTAGCTCGCGAGGCCAGGAACGAGGGTCGGCGGTATACGCCCTGGAAGAACAAACCAGTCATGGCAAGCTGCAAGAATCCGAAGCAGACCTGCCAAAGGAAGGCAAAAGGGAGTTCTCTCCGCCAACAGAAGAGCTCGAGCTTGTTTTTTTACATAGCCCTGAAAAACAAGTCAGATCGTACCTCGCCCATTTTGGGACTTACGAGGTGAGTCAAGTTCCAAGATCTGAGAATTCTAATGCGGATGCCTTAGCCAAATTGGCATCAGCATATGAGACCGACCTGGCTAGATCGGTCCCGGTCGAGATCTTGGACACTCCTTCAATCTTGGAGCCAGATGTGATGGAGGTTGATACTCTATCACCCTCTTGGATGGACCGAATCGTGGAGTTCATCAAAGGAAGTCCACCGTAA

Coding sequence (CDS)

ATGTGCTACTTCCTCACCGGCTTGGCCGATGAGACTTTAACAGTAAAACTTGGAGAGAAGGCTCCAGCCACCTTCGCCGAAGTCCTGCAGAAGGCGAAGAAGGTCATTGATGGGCAAGAGCTCCTCCGAACCAAAACTGGCCGACCTGAAAGACAGATCGACCAGAAGAACAGAATAGAGTACCGTAGGTCGGAGAGCGGCCCCAGCCGGAACCGACCTTATGAACGGTATACTCTAACCACCATCCCCATCTCCGAGATACTCACGAACATCGAGGAGAGTGGGATGGAAAAGCTCCTCAAGCGACCTGAGAAGCTCCGAGGAGATCCAGAAAAATTGAAGACCTCATTCAAGACGGCTACTTCAAAAAATTCTTGGGCAAACCGAGGTTTAACTCGGTCGAAAAGAAAGAAGAGAGGAAGCATTCAAGAACGCCGCCTTGCTGGGATGATCGACCTGCGGTCATCAACACTATTTTCGGAGGTCCGAGGGGGGCCAGTCCAGAAACAAGAGGAAGGAGCTAGCTCGCGAGGCCAGGAACGAGGGTCGGCGGTATACGCCCTGGAAGAACAAACCAGTCATGGCAAGCTGCAAGAATCCGAAGCAGACCTGCCAAAGGAAGGCAAAAGGGAGTTCTCTCCGCCAACAGAAGAGCTCGAGCTTGTTTTTTTACATAGCCCTGAAAAACAAGTCAGATCGTACCTCGCCCATTTTGGGACTTACGAGGTGAGTCAAGTTCCAAGATCTGAGAATTCTAATGCGGATGCCTTAGCCAAATTGGCATCAGCATATGAGACCGACCTGGCTAGATCGGTCCCGGTCGAGATCTTGGACACTCCTTCAATCTTGGAGCCAGATGTGATGGAGGTTGATACTCTATCACCCTCTTGGATGGACCGAATCGTGGAGTTCATCAAAGGAAGTCCACCGTAA

Protein sequence

MCYFLTGLADETLTVKLGEKAPATFAEVLQKAKKVIDGQELLRTKTGRPERQIDQKNRIEYRRSESGPSRNRPYERYTLTTIPISEILTNIEESGMEKLLKRPEKLRGDPEKLKTSFKTATSKNSWANRGLTRSKRKKRGSIQERRLAGMIDLRSSTLFSEVRGGPVQKQEEGASSRGQERGSAVYALEEQTSHGKLQESEADLPKEGKREFSPPTEELELVFLHSPEKQVRSYLAHFGTYEVSQVPRSENSNADALAKLASAYETDLARSVPVEILDTPSILEPDVMEVDTLSPSWMDRIVEFIKGSPP

Homology

[Close]

BLAST of Moc11g31920 vs. NCBI nr
Match: XP_022158414.1 (uncharacterized protein LOC111024904 [Momordica charantia])

HSP 1 Score: 191.0 bits (484), Expect = 1.5e-44
Identity = 160/409 (39.12%), Postives = 185/409 (45.23%), Query Frame = 0


Query: 1   MCYFLTGLADETLTVKLGEKAPATFAEVLQKAKKVIDGQELLRTKTGRPERQIDQK---- 60
           MCYFLT LADETLTVKLGE+AP TF EVLQKAKKVIDGQELLRTKTGRPE+QIDQK    
Sbjct: 96  MCYFLTSLADETLTVKLGEEAPTTFVEVLQKAKKVIDGQELLRTKTGRPEKQIDQKKLSQ 155

Query: 61  ------------------NRIEYRRSESGPSRNRPYERYTLTTIPISEILTNIEESGMEK 120
                             +R EYRR ESGPSR+RPYERYT +TIPISEILTNIEESGMEK
Sbjct: 156 EKRKADSKSRDKGSSSSASRTEYRRLESGPSRSRPYERYTSSTIPISEILTNIEESGMEK 215

Query: 121 LLKRPEKLRGDPEK----------------------LKTS---------FKTATSK---N 180
           LLKRPEKLRGD EK                      LK           FK    K   N
Sbjct: 216 LLKRPEKLRGDLEKRNKEKYCRFHRDHGHNTTSCWELKRQIEDLIQDGYFKKFVGKPRSN 275

Query: 181 S----------------------------WANRGLTRSKRKK------------------ 231
           S                              N G + +KRK+                  
Sbjct: 276 SVEKKEERKRSRTPPRREDRPAVINTIFGGPNGGQSGNKRKELAREARREVCIIREHKPT 335

[Close]

BLAST of Moc11g31920 vs. NCBI nr
Match: XP_022153957.1 (uncharacterized protein LOC111021344 [Momordica charantia])

HSP 1 Score: 190.3 bits (482), Expect = 2.5e-44
Identity = 105/134 (78.36%), Postives = 109/134 (81.34%), Query Frame = 0


Query: 1   MCYFLTGLADETLTVKLGEKAPATFAEVLQKAKKVIDGQELLRTKTGRPERQIDQK---- 60
           MCYFLTGLADETLTVKLGE+APATFAEVL+KAKKVIDGQELLRTKTGRPERQIDQK    
Sbjct: 96  MCYFLTGLADETLTVKLGEEAPATFAEVLKKAKKVIDGQELLRTKTGRPERQIDQKKLNQ 155

Query: 61  ------------------NRIEYRRSESGPSRNRPYERYTLTTIPISEILTNIEESGMEK 113
                             +R EYRRSESGPSR+RPYERYT TTIPISEILTNIEESGMEK
Sbjct: 156 EKRKADSKSKDKGSSSSVSRTEYRRSESGPSRSRPYERYTSTTIPISEILTNIEESGMEK 215

[Close]

BLAST of Moc11g31920 vs. NCBI nr
Match: XP_022150100.1 (uncharacterized protein LOC111018362 [Momordica charantia])

HSP 1 Score: 186.0 bits (471), Expect = 4.8e-43
Identity = 174/445 (39.10%), Postives = 204/445 (45.84%), Query Frame = 0


Query: 1   MCYFLTGLADETLTVKLGEKAPATFAEVLQKAKKVIDGQELLRTKTGRPERQIDQKNRIE 60
           MCYFLTGLADETLTVKLGE+A ATFAEVLQKAKKVIDGQELLRTKTGRPE+QIDQK   +
Sbjct: 18  MCYFLTGLADETLTVKLGEEARATFAEVLQKAKKVIDGQELLRTKTGRPEKQIDQKKLSQ 77

Query: 61  YRR----------SESGPSR------NRPYERYTLTTIPISEILTN-------------- 120
            +R          S S  SR      NR   R T   +P  ++L                
Sbjct: 78  EKRKADSKSKDKGSSSSGSRTEITALNRFVSRSTDKCLPFFKVLRKKGPFEWTVECEQAL 137

Query: 121 ---------------------------IEESGMEKLLKRPEKLRGDP----EKLKTSFKT 180
                                      + +S +   L + E  R  P     K  T  +T
Sbjct: 138 EQLKNYLCSAPLLAKPLPGEKLHLYLAVSDSAVSSTLIKQEGARQSPVYYTSKAMTEPET 197

Query: 181 ATSKNSWANRGLTRSKRKKRGSIQERRLAGMIDLRSSTLFSEVR-GGPVQKQEEGASS-- 240
              +       L  S R+ R   Q   +  + +L    +F ++   G + K     S   
Sbjct: 198 RYPQTEKLAFALVTSARRLRPYFQAHTVIVLTNLPLKNIFLKLEISGRLMKWALELSEYD 257

Query: 241 -----RGQERGSAV-YALEEQTSHGKLQESEAD--------------------LPKEGKR 300
                R   +G AV   + E T   +L ES+                      L   G+R
Sbjct: 258 IQFGPRTALKGQAVANFIAELTPPSQLTESDLSWTIYVDGSSNERGCGAGILLLAPSGER 317

Query: 301 -------EFSPPTEELEL-------------------VFLHSP----------------- 310
                   F     E E                    VF  S                  
Sbjct: 318 FEYALRFNFRTSNNEAEYEALLACLCVARGLGAVHIKVFSDSQLVVNQIKEEYQTKDPRM 377

[Close]

BLAST of Moc11g31920 vs. NCBI nr
Match: XP_022151292.1 (uncharacterized protein LOC111019256 [Momordica charantia])

HSP 1 Score: 186.0 bits (471), Expect = 4.8e-43
Identity = 102/144 (70.83%), Postives = 110/144 (76.39%), Query Frame = 0


Query: 1   MCYFLTGLADETLTVKLGEKAPATFAEVLQKAKKVIDGQELLRTKTGRPERQIDQK---- 60
           MCYFLTGLADETLTVKLGE+APATF EVLQKAKKVIDGQEL RTKTGRPE+QIDQK    
Sbjct: 96  MCYFLTGLADETLTVKLGEEAPATFVEVLQKAKKVIDGQELFRTKTGRPEKQIDQKKLNQ 155

Query: 61  ------------------NRIEYRRSESGPSRNRPYERYTLTTIPISEILTNIEESGMEK 120
                             +RIEYRRS+ GP+R+RPYE YT TTIPISEILTNIEE+GMEK
Sbjct: 156 ETRRLDVKSKDKGQSSSXSRIEYRRSDGGPNRSRPYEXYTPTTIPISEILTNIEETGMEK 215

Query: 121 LLKRPEKLRGDPEKLKTSFKTATS 123
           LLKRPEKLRGDPEK     K + S
Sbjct: 216 LLKRPEKLRGDPEKRNKDKKLSIS 239

[Close]

BLAST of Moc11g31920 vs. NCBI nr
Match: XP_022142768.1 (uncharacterized protein LOC111012806 [Momordica charantia])

HSP 1 Score: 180.3 bits (456), Expect = 2.6e-41
Identity = 99/134 (73.88%), Postives = 105/134 (78.36%), Query Frame = 0


Query: 1   MCYFLTGLADETLTVKLGEKAPATFAEVLQKAKKVIDGQELLRTKTGRPERQIDQK---- 60
           MCYFLTGLADETLTVKLGE+APATF EVLQKAKKVIDGQELLRTKTGRPE+QIDQK    
Sbjct: 90  MCYFLTGLADETLTVKLGEEAPATFVEVLQKAKKVIDGQELLRTKTGRPEKQIDQKKLNQ 149

Query: 61  ------------------NRIEYRRSESGPSRNRPYERYTLTTIPISEILTNIEESGMEK 113
                             +R EYRR ESGPSR+RPYE YT TTIPISEIL NIEE GMEK
Sbjct: 150 EKRKADSKSKDKGSSSSGSRTEYRRLESGPSRSRPYEWYTPTTIPISEILMNIEEGGMEK 209

[Close]

BLAST of Moc11g31920 vs. ExPASy TrEMBL
Match: A0A6J1DZB9 (uncharacterized protein LOC111024904 OS=Momordica charantia OX=3673 GN=LOC111024904 PE=4 SV=1)

HSP 1 Score: 191.0 bits (484), Expect = 7.2e-45
Identity = 160/409 (39.12%), Postives = 185/409 (45.23%), Query Frame = 0


Query: 1   MCYFLTGLADETLTVKLGEKAPATFAEVLQKAKKVIDGQELLRTKTGRPERQIDQK---- 60
           MCYFLT LADETLTVKLGE+AP TF EVLQKAKKVIDGQELLRTKTGRPE+QIDQK    
Sbjct: 96  MCYFLTSLADETLTVKLGEEAPTTFVEVLQKAKKVIDGQELLRTKTGRPEKQIDQKKLSQ 155

Query: 61  ------------------NRIEYRRSESGPSRNRPYERYTLTTIPISEILTNIEESGMEK 120
                             +R EYRR ESGPSR+RPYERYT +TIPISEILTNIEESGMEK
Sbjct: 156 EKRKADSKSRDKGSSSSASRTEYRRLESGPSRSRPYERYTSSTIPISEILTNIEESGMEK 215

Query: 121 LLKRPEKLRGDPEK----------------------LKTS---------FKTATSK---N 180
           LLKRPEKLRGD EK                      LK           FK    K   N
Sbjct: 216 LLKRPEKLRGDLEKRNKEKYCRFHRDHGHNTTSCWELKRQIEDLIQDGYFKKFVGKPRSN 275

Query: 181 S----------------------------WANRGLTRSKRKK------------------ 231
           S                              N G + +KRK+                  
Sbjct: 276 SVEKKEERKRSRTPPRREDRPAVINTIFGGPNGGQSGNKRKELAREARREVCIIREHKPT 335

[Close]

BLAST of Moc11g31920 vs. ExPASy TrEMBL
Match: A0A6J1DKD3 (uncharacterized protein LOC111021344 OS=Momordica charantia OX=3673 GN=LOC111021344 PE=4 SV=1)

HSP 1 Score: 190.3 bits (482), Expect = 1.2e-44
Identity = 105/134 (78.36%), Postives = 109/134 (81.34%), Query Frame = 0


Query: 1   MCYFLTGLADETLTVKLGEKAPATFAEVLQKAKKVIDGQELLRTKTGRPERQIDQK---- 60
           MCYFLTGLADETLTVKLGE+APATFAEVL+KAKKVIDGQELLRTKTGRPERQIDQK    
Sbjct: 96  MCYFLTGLADETLTVKLGEEAPATFAEVLKKAKKVIDGQELLRTKTGRPERQIDQKKLNQ 155

Query: 61  ------------------NRIEYRRSESGPSRNRPYERYTLTTIPISEILTNIEESGMEK 113
                             +R EYRRSESGPSR+RPYERYT TTIPISEILTNIEESGMEK
Sbjct: 156 EKRKADSKSKDKGSSSSVSRTEYRRSESGPSRSRPYERYTSTTIPISEILTNIEESGMEK 215

[Close]

BLAST of Moc11g31920 vs. ExPASy TrEMBL
Match: A0A6J1DD31 (uncharacterized protein LOC111019256 OS=Momordica charantia OX=3673 GN=LOC111019256 PE=4 SV=1)

HSP 1 Score: 186.0 bits (471), Expect = 2.3e-43
Identity = 102/144 (70.83%), Postives = 110/144 (76.39%), Query Frame = 0


Query: 1   MCYFLTGLADETLTVKLGEKAPATFAEVLQKAKKVIDGQELLRTKTGRPERQIDQK---- 60
           MCYFLTGLADETLTVKLGE+APATF EVLQKAKKVIDGQEL RTKTGRPE+QIDQK    
Sbjct: 96  MCYFLTGLADETLTVKLGEEAPATFVEVLQKAKKVIDGQELFRTKTGRPEKQIDQKKLNQ 155

Query: 61  ------------------NRIEYRRSESGPSRNRPYERYTLTTIPISEILTNIEESGMEK 120
                             +RIEYRRS+ GP+R+RPYE YT TTIPISEILTNIEE+GMEK
Sbjct: 156 ETRRLDVKSKDKGQSSSXSRIEYRRSDGGPNRSRPYEXYTPTTIPISEILTNIEETGMEK 215

Query: 121 LLKRPEKLRGDPEKLKTSFKTATS 123
           LLKRPEKLRGDPEK     K + S
Sbjct: 216 LLKRPEKLRGDPEKRNKDKKLSIS 239

[Close]

BLAST of Moc11g31920 vs. ExPASy TrEMBL
Match: A0A6J1D7J6 (Ribonuclease H OS=Momordica charantia OX=3673 GN=LOC111018362 PE=4 SV=1)

HSP 1 Score: 186.0 bits (471), Expect = 2.3e-43
Identity = 174/445 (39.10%), Postives = 204/445 (45.84%), Query Frame = 0


Query: 1   MCYFLTGLADETLTVKLGEKAPATFAEVLQKAKKVIDGQELLRTKTGRPERQIDQKNRIE 60
           MCYFLTGLADETLTVKLGE+A ATFAEVLQKAKKVIDGQELLRTKTGRPE+QIDQK   +
Sbjct: 18  MCYFLTGLADETLTVKLGEEARATFAEVLQKAKKVIDGQELLRTKTGRPEKQIDQKKLSQ 77

Query: 61  YRR----------SESGPSR------NRPYERYTLTTIPISEILTN-------------- 120
            +R          S S  SR      NR   R T   +P  ++L                
Sbjct: 78  EKRKADSKSKDKGSSSSGSRTEITALNRFVSRSTDKCLPFFKVLRKKGPFEWTVECEQAL 137

Query: 121 ---------------------------IEESGMEKLLKRPEKLRGDP----EKLKTSFKT 180
                                      + +S +   L + E  R  P     K  T  +T
Sbjct: 138 EQLKNYLCSAPLLAKPLPGEKLHLYLAVSDSAVSSTLIKQEGARQSPVYYTSKAMTEPET 197

Query: 181 ATSKNSWANRGLTRSKRKKRGSIQERRLAGMIDLRSSTLFSEVR-GGPVQKQEEGASS-- 240
              +       L  S R+ R   Q   +  + +L    +F ++   G + K     S   
Sbjct: 198 RYPQTEKLAFALVTSARRLRPYFQAHTVIVLTNLPLKNIFLKLEISGRLMKWALELSEYD 257

Query: 241 -----RGQERGSAV-YALEEQTSHGKLQESEAD--------------------LPKEGKR 300
                R   +G AV   + E T   +L ES+                      L   G+R
Sbjct: 258 IQFGPRTALKGQAVANFIAELTPPSQLTESDLSWTIYVDGSSNERGCGAGILLLAPSGER 317

Query: 301 -------EFSPPTEELEL-------------------VFLHSP----------------- 310
                   F     E E                    VF  S                  
Sbjct: 318 FEYALRFNFRTSNNEAEYEALLACLCVARGLGAVHIKVFSDSQLVVNQIKEEYQTKDPRM 377

[Close]

BLAST of Moc11g31920 vs. ExPASy TrEMBL
Match: A0A6J1CP40 (uncharacterized protein LOC111012806 OS=Momordica charantia OX=3673 GN=LOC111012806 PE=4 SV=1)

HSP 1 Score: 180.3 bits (456), Expect = 1.3e-41
Identity = 99/134 (73.88%), Postives = 105/134 (78.36%), Query Frame = 0


Query: 1   MCYFLTGLADETLTVKLGEKAPATFAEVLQKAKKVIDGQELLRTKTGRPERQIDQK---- 60
           MCYFLTGLADETLTVKLGE+APATF EVLQKAKKVIDGQELLRTKTGRPE+QIDQK    
Sbjct: 90  MCYFLTGLADETLTVKLGEEAPATFVEVLQKAKKVIDGQELLRTKTGRPEKQIDQKKLNQ 149

Query: 61  ------------------NRIEYRRSESGPSRNRPYERYTLTTIPISEILTNIEESGMEK 113
                             +R EYRR ESGPSR+RPYE YT TTIPISEIL NIEE GMEK
Sbjct: 150 EKRKADSKSKDKGSSSSGSRTEYRRLESGPSRSRPYEWYTPTTIPISEILMNIEEGGMEK 209

The following BLAST results are available for this feature:

BLAST of Moc11g31920 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022158414.1	1.5e-44	39.12	uncharacterized protein LOC111024904 [Momordica charantia]	[more]
XP_022153957.1	2.5e-44	78.36	uncharacterized protein LOC111021344 [Momordica charantia]	[more]
XP_022150100.1	4.8e-43	39.10	uncharacterized protein LOC111018362 [Momordica charantia]	[more]
XP_022151292.1	4.8e-43	70.83	uncharacterized protein LOC111019256 [Momordica charantia]	[more]
XP_022142768.1	2.6e-41	73.88	uncharacterized protein LOC111012806 [Momordica charantia]	[more]

BLAST of Moc11g31920 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Moc11g31920 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DZB9	7.2e-45	39.12	uncharacterized protein LOC111024904 OS=Momordica charantia OX=3673 GN=LOC111024...	[more]
A0A6J1DKD3	1.2e-44	78.36	uncharacterized protein LOC111021344 OS=Momordica charantia OX=3673 GN=LOC111021...	[more]
A0A6J1DD31	2.3e-43	70.83	uncharacterized protein LOC111019256 OS=Momordica charantia OX=3673 GN=LOC111019...	[more]
A0A6J1D7J6	2.3e-43	39.10	Ribonuclease H OS=Momordica charantia OX=3673 GN=LOC111018362 PE=4 SV=1	[more]
A0A6J1CP40	1.3e-41	73.88	uncharacterized protein LOC111012806 OS=Momordica charantia OX=3673 GN=LOC111012...	[more]

BLAST of Moc11g31920 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 194..212
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 46..70
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 106..147
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 162..212
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 46..73

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc11g31920.1	Moc11g31920.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0090304	nucleic acid metabolic process