Moc11g30030 (gene) Bitter gourd (OHB3-1) v2

Overview
NameMoc11g30030
Typegene
OrganismMomordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
DescriptionUnknown protein
Locationchr11: 21982208 .. 21984988 (-)
RNA-Seq ExpressionMoc11g30030
SyntenyMoc11g30030
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCTTACCCACTCTCAAGTCTGCTTCAAAATTTGCATGCATACACAAAGGCAAGGTCTTTTGAAGACTGTAATTTTGAAGGCTCGCACAAGAAAATGTGTATACAAAATTTCTCTCGGTTGCTTAGACAGTTACATAAGGCAAGGTCTTTCACATTGCCTTTGAATGCAATGGAGGTATCTCAAATTTCTTGATCCTTCATTTTTTCTTAGTATACTTCCTAATCCTTATTAACTTCTTTACTTATTTGTTTACAAGGTGATTAATATGGCCGCTCCTTTAGACGTATTTTCTTTTCATAATTTGAGACATTTGAAGTTGAAAACAAAGGAGAACAAGAAGATGATAGTGATAGAGTTGCCAATCACTACATTTGCATTTTTGCAGCATTGTCCCAATCCAATCGCTACATTTGCATTTTTGCAGAATTGCCCCAATTTAGAGACTATGGTGGTTGATCCCAATCAGGTAAAACTTTTGTCGAAATCTTCTCTTACATAAAAAGGAATTGTAAAAATAGCATAGTTTCAAATATTTATGTTTTTAGTCTAACATCATTAACCTCAACTTACAGGAGTAGTTGATGATGGGATAGAACAGATCGATCCTCCAAAGATGTGAGGGTGATTTTTTTTTCGAACAAAGTGATAGCCATCTCAATAAATCTAGTTTGGTCAAGAAATCTGCCAGTTAATGGTTTGGTCAATAATATATACCTTTTTGGTAATATATAGGTATAAGTTCTTTTAATCTCTTGCCAATATTTGGTTTGTCTTTCATTCTGCAGTATTCAGTTCGTTGGCAGGCCTTCAAGCGTTCCATTAGCATATTATAAAGTTCATTACTTTTTTATTTAGTTGGAATATTTTATGTTTTCGAAGGTTAAAGCAAATGGAGGAATGAGTTCATGGTCTGAACTGTATTTAGAAGTTGGTTTGGGTGAGCCTAGGAGTTTGATACATTTTTCTTATTAATGCCTTCAAGCGTCATGTTTGCTCTAATTTCCTTATCTATTCATGACGTTTTCTTAAATGTTATGTAATGTCAAATTTACAGTAGTGTAGTCTTCAAACATAGATTTCTATAGTATGTTTGTTTTGTTGCTTGGTGACAGGTGCTTTCTCACAAATACTAGAAGTCCCTAGGAAGCTTTGAAAGACCAAAAGATACAAGAGTACGGGATTATACCTTTTATTGTGTGATTTTAGACAGTGTCACGTAAAGTATTGCTGCAAATGAAGTTTGGTATCTATTAATAATGACTATGGTTTTTTGGATTAATTCAGGAGGTTAGAGGTATTTTTTAGCAGTGTTTTTTAGGCGCAAGGCGATAAGTCCTTTGATCGTCTTGAGGTGAGAGGTGATGCTTGATTGAAGCGAAGCGCACCTTAATAAATAAATAAAATTATATATAGTGCATAAATTTATATAGTAAACATAGTCTAAAGACTCAATACCAAAATAGTGCCATGGTAAATGTCAACAAGATACATAAAACAACCAAATTCTATTAGTTCCCAACAAAGACAAGTAACATGAAGAAATACTGGAGTCTGGAATAGAATAAAAGTAAAGGTAAGTGATCAAATATCATCATCCTCATCTAAATCTAAATTCTCTTCATCTTGGACATCCTCACAATCTTCTTTTTCTAATTCTTCTTCTTCGGTGTCGTCATCATCATCACTAACCACCATTGGCATTGGTGTGAAATGAAATAGGTGAAAAGGAATACATAAGATAAAAGAATAAAAAAATAAAAAAAGAAACCTTCGAGCGAGAGTGAATGTTGGAGGAGGAGGAGGCGGCGACAACGATGGTCAAAGACCGCAGGTGAGTGAGTTGAGGGTGAAAGTCAACAGGCAAAGAGTGAGAAATTAGAGTTTGGGTATTTCTTTTGTGAGGTAGAGAGATAGAATAGTTTCTTAACCTTAAAAGATAAAATAAAAATAATAATAAAATGAGGCAGATCGCCTTGCCTCAAGCAAGAGGTGCACTAAGACATGTTAGGGTGAGCGCTCGATTGAAGGTGCTCGCTTGGACACCTTGCAGGGTACCTCGGCGAAATAGCCTTGCCTGTCGCCCGGGTGCGCCTTGAAATTACTATTGTGGAGATATTCGAGGCACGAGAGGTACCGTTGTCCTTAAAGCGTCCATAAGAAAGACGCTTACTGTCTGCTCTTGATTCAACACACTTCCACTTTAGTGTCCTAGTTAATACTCTTATTTTCTCTCGAACCATAGTAATATTTTTTTGATCAAATCATTGAATTATTTATTTCTCTTGAAATTTCTCTTCAATGTTTATTTTTACACACGTCGTTTTTTAGGGTGCCTACAGCCATTATGTGGCATAGGGGTTACATCCAGTATGAAACTTAAGAGTATATCGCTTCTACGAATAGCTCTTAATGTTGCATCTCTTCCGAGACCTGGGCCCTTTATCATGACTTCCGCTCGTTGCATACCCTGATCCACTACTACCCGAATAGCATTTCCTGCTGCGGTTTGATCGGCAAATAGTGTCCCGAAGCCCAAGCCTCAATTTCCCCTCTCCCCAAAATCCCTCTCCTCATCATCTGGCTCAGGACGGCCTCTCCATGATCGGCCACTTCTTCGAGCTCGACCCATGGCGCCTCAATTTCCCCAAGAAACAATCCGACCCTTTCCCCTCTAGCCAAATCTCGCCTCCTGGAATCGCCGATTCAACCTTCTCTTTCTCGACAATCCCTATCGGAATTGGCTTCGACGATAGCTGCACCTGCAACCGATATCCTTAG

mRNA sequence

ATGTCTTACCCACTCTCAAGTCTGCTTCAAAATTTGCATGCATACACAAAGGCAAGGTCTTTTGAAGACTGTAATTTTGAAGGCTCGCACAAGAAAATGTGTATACAAAATTTCTCTCGGTTGCTTAGACAGTTACATAAGGCAAGGTCTTTCACATTGCCTTTGAATGCAATGGAGGTGATTAATATGGCCGCTCCTTTAGACGTATTTTCTTTTCATAATTTGAGACATTTGAAGTTGAAAACAAAGGAGAACAAGAAGATGATAGTGATAGAGTTGCCAATCACTACATTTGCATTTTTGCAGCATTGTCCCAATCCAATCGCTACATTTGCATTTTTGCAGAATTGCCCCAATTTAGAGACTATGGTGGTTGATCCCAATCAGGTTAAAGCAAATGGAGGAATGAGTTCATGGTCTGAACTGTATTTAGAAGTTGGTTTGGGGTACCTCGGCGAAATAGCCTTGCCTGTCGCCCGGGTGCGCCTTGAAATTACTATTGTGGAGATATTCGAGGCACGAGAGGACGGCCTCTCCATGATCGGCCACTTCTTCGAGCTCGACCCATGGCGCCTCAATTTCCCCAAGAAACAATCCGACCCTTTCCCCTCTAGCCAAATCTCGCCTCCTGGAATCGCCGATTCAACCTTCTCTTTCTCGACAATCCCTATCGGAATTGGCTTCGACGATAGCTGCACCTGCAACCGATATCCTTAG

Coding sequence (CDS)

ATGTCTTACCCACTCTCAAGTCTGCTTCAAAATTTGCATGCATACACAAAGGCAAGGTCTTTTGAAGACTGTAATTTTGAAGGCTCGCACAAGAAAATGTGTATACAAAATTTCTCTCGGTTGCTTAGACAGTTACATAAGGCAAGGTCTTTCACATTGCCTTTGAATGCAATGGAGGTGATTAATATGGCCGCTCCTTTAGACGTATTTTCTTTTCATAATTTGAGACATTTGAAGTTGAAAACAAAGGAGAACAAGAAGATGATAGTGATAGAGTTGCCAATCACTACATTTGCATTTTTGCAGCATTGTCCCAATCCAATCGCTACATTTGCATTTTTGCAGAATTGCCCCAATTTAGAGACTATGGTGGTTGATCCCAATCAGGTTAAAGCAAATGGAGGAATGAGTTCATGGTCTGAACTGTATTTAGAAGTTGGTTTGGGGTACCTCGGCGAAATAGCCTTGCCTGTCGCCCGGGTGCGCCTTGAAATTACTATTGTGGAGATATTCGAGGCACGAGAGGACGGCCTCTCCATGATCGGCCACTTCTTCGAGCTCGACCCATGGCGCCTCAATTTCCCCAAGAAACAATCCGACCCTTTCCCCTCTAGCCAAATCTCGCCTCCTGGAATCGCCGATTCAACCTTCTCTTTCTCGACAATCCCTATCGGAATTGGCTTCGACGATAGCTGCACCTGCAACCGATATCCTTAG

Protein sequence

MSYPLSSLLQNLHAYTKARSFEDCNFEGSHKKMCIQNFSRLLRQLHKARSFTLPLNAMEVINMAAPLDVFSFHNLRHLKLKTKENKKMIVIELPITTFAFLQHCPNPIATFAFLQNCPNLETMVVDPNQVKANGGMSSWSELYLEVGLGYLGEIALPVARVRLEITIVEIFEAREDGLSMIGHFFELDPWRLNFPKKQSDPFPSSQISPPGIADSTFSFSTIPIGIGFDDSCTCNRYP
Homology
[Close]
BLAST of Moc11g30030 vs. NCBI nr
Match: XP_038890213.1 (uncharacterized protein LOC120079853 [Benincasa hispida])

HSP 1 Score: 64.7 bits (156), Expect = 1.2e-06
Identity = 34/79 (43.04%), Postives = 49/79 (62.03%), Query Frame = 0 

Query: 28  GSHKKMCIQNFSRLLRQLHKARSFTLPLNAMEVINMAAPLDVFSFHNLRHLKLKTKENKK 87
           G +++   +N S+LLR  H A SFTLP NA +V+  +  L+  SFHNLRHL+ +T  +K+
Sbjct: 225 GRNQQKIKENLSQLLRVFHNATSFTLPPNAKQVMFKSPSLNGCSFHNLRHLEFRTNWSKE 284

Query: 88  MIVIELPITTFAFLQHCPN 107
           MI   +   TF+    CPN
Sbjct: 285 MIEEPVSSNTFSNFIDCPN 303

The following BLAST results are available for this feature:
BLAST of Moc11g30030 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_038890213.11.2e-0643.04uncharacterized protein LOC120079853 [Benincasa hispida][more]
BLAST of Moc11g30030 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Moc11g30030 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Moc11g30030 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Moc11g30030.1Moc11g30030.1mRNA