Moc11g29900 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc11g29900
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	zinc finger protein CONSTANS-LIKE 5
Location	chr11: 21910714 .. 21912750 (+)
RNA-Seq Expression	Moc11g29900
Synteny	Moc11g29900

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCCTCCACCCACCGTCTCGTTGCTTCAGGGAACATACCTCGCCGTCGCCGTGTGGTTTCTTGTTCAAAAATCTGGAGGAGGAAGTTCTGAAGATTTAAATAGTGGGAAGATGAAGCTTCGACGACAAGAGTCCTCCCGCAGATTTGCAAGGGAGGGAGAGCAACTCCAACTTTTATTGGACCCACAAGGACGGCCCCAAAATCAAATAAGGCGTCGGTGGTGGTGGTGATATCTTCTTCACTGAAAATGAAATGGATTCTTTTATTGACTTTGACTATCCAAATCCAGCCAATTAGAGCGCAATTAACGATAGCGTCGTCCCGATTCAGACGAAGCCACTCTCTACCCCTGAAAATTGCTTCGACATAGTTTGTTGCATATCCAAGCTCAATTCATTTGGCTATCAATCTCAATCCCTGAGCCACAGCGTAAATAGCCCAACCCCCCCCCCCCCAACTTCAATTAAAACAAAAATTTTCTTAATTAGCCCCGCAAACAAGCTGTGTCATTCCCTTACTATAAAGCTTCTTGCGAGGAAGCCCTCCCCAACCAAGATTTCAGTTCTCAACAGGAGCCGTTGTCGAGTAAACTAATTAAGTCGTGTTTGTTCTAATTTGGTTCAGGTGTCGCCCTCTTCCCTAGAGGTTGGAGTAGTTCTAAAAGGGAATTCTATGTTGGAGATGTCGTACCCGTTAGGTCAAACCGGGGCGCATTCGGTTTTAGAAATGTCGGGATCTGACAACCAAGCGACTCAATTGTGTGGAATGGATCTGGATGCGAGAGTGTTGAGGTACAGAGAGGAAAAGAAGAACCAGAAGTTCGAGAAGACAATCTGGTACGCTTCGAGAAAAGCTTATGCAGAAACCCGACCCAGAATCAAAGGTCGGTTCGCAAAACACGACGAAATGTATGGGTCGGGCGGTTCGTCTATCTGCTTGAGGCATCACAATGGGACGGCGGGTAGAGGCATGGAAATGGCGGTGGTGAGGCTCGTCGGACAAGACAACAATAAGAGGAGGGAAGAATATGGAATTTCCAGTCACACTAAACATATTATTAAACTAATATATTTTATCAAATAAATAAATTAACTGACATATCATTTTGATGTTAGTCAAACTAACGGTCAAAATAATTTAATGACCATTTATAATTATTTTACAAATTTTAGTGACAAAAAATGTTCGTTTTAAAATTTGAAGGACCAAATAGGTACTGATTCCAAACTTCAAGGACTAAAAGTGTCTATTTTGAAACATCAGGGATCAAATAGACAGCTACACCAAACTCAAGGACCAAAGGTGTATTTTTTCCTTATTTCTATATAACATTATATATAACACAATAGGCTTATATATTTTTTAGATAAGTTAATCCCGGAGGTGAGATAAATGGGGTTATGGAGGAGAATCTTTGCCTTCCATTTTTGCCATCTACTTTTTAATAAATACCTATTTTGCCCTTTAAAACTTGTATGGGAAGCAACTGTTGGGTGGAGGTGTCTCTTGAGAGAAGTAGTGTGTCCATTCGGGTGCAATTGAGATTGATAATTATGTATATATAATACAACAATATAATTTTTTTTAGAGAGATAAGTTTATCGAGGAGGTGCAATTTGATGAAATTATATGTTCATTCCCAAACAGGTGAGATTACAAACATGAGAAAAACTGAGTATCGATCATGCATAAAATTGTGTATTTTTCTCTCTCTCAAAATGTCTAGGAAGGTTTTTCTCTTACAGAAAAATCAAAGCTTTAAAAAAAATGGAAATTGAGAGTTTATGTTCTTGCAAAGGGAAACACTAAAGATTCGAGAATCCATAAATTTATTTTATTTGATGATGAGGTAGAGTATAAAATTACATTTTCATATTAATATATTAATTATTTATTTTAATCTTAATATTTTCATTTTTCCTAATGTAAATCAGTGTACTTTTTTAGGGAGCAAGAGTAATAGAAGGAGACAGAGGAATGTGAATGAGTGGTGTAATTTTGAAGAGGGAGATGAGGAATGTGGATGGGTAGTGTAA

mRNA sequence

ATGCCTCCACCCACCGTCTCGTTGCTTCAGGGAACATACCTCGCCGTCGCCGTGTGGTTTCTTGTTCAAAAATCTGGAGGAGGAAGTTCTGAAGATTTAAATAGTGGGAAGATGAAGCTTCGACGACAAGAGTCCTCCCGCAGATTTGCAAGGGAGGGAGAGCAACTCCAACTTTTATTGGACCCACAAGGACGGCCCCAAAATCAAATAAGGCGTCGCGCAATTAACGATAGCGTCGTCCCGATTCAGACGAAGCCACTCTCTACCCCTGAAAATTGCTTCGACATAGTTTGTTGCATATCCAAGCTCAATTCATTTGGCTATCAATCTCAATCCCTGAGCCACAGCGTGTCGCCCTCTTCCCTAGAGGTTGGAGTAGTTCTAAAAGGGAATTCTATGTTGGAGATGTCGTACCCGTTAGGTCAAACCGGGGCGCATTCGGTTTTAGAAATGTCGGGATCTGACAACCAAGCGACTCAATTGTGTGGAATGGATCTGGATGCGAGAGTGTTGAGGTACAGAGAGGAAAAGAAGAACCAGAAGTTCGAGAAGACAATCTGGTACGCTTCGAGAAAAGCTTATGCAGAAACCCGACCCAGAATCAAAGGTCGGTTCGCAAAACACGACGAAATGTATGGGTCGGGCGGTTCGTCTATCTGCTTGAGGCATCACAATGGGACGGCGGGTAGAGGCATGGAAATGGCGGTGGTGAGGCTCGTCGGACAAGACAACAATAAGAGGAGGGAAGAATATGGAATTTCCAGGAGCAAGAGTAATAGAAGGAGACAGAGGAATGTGAATGAGTGGTGTAATTTTGAAGAGGGAGATGAGGAATGTGGATGGGTAGTGTAA

Coding sequence (CDS)

ATGCCTCCACCCACCGTCTCGTTGCTTCAGGGAACATACCTCGCCGTCGCCGTGTGGTTTCTTGTTCAAAAATCTGGAGGAGGAAGTTCTGAAGATTTAAATAGTGGGAAGATGAAGCTTCGACGACAAGAGTCCTCCCGCAGATTTGCAAGGGAGGGAGAGCAACTCCAACTTTTATTGGACCCACAAGGACGGCCCCAAAATCAAATAAGGCGTCGCGCAATTAACGATAGCGTCGTCCCGATTCAGACGAAGCCACTCTCTACCCCTGAAAATTGCTTCGACATAGTTTGTTGCATATCCAAGCTCAATTCATTTGGCTATCAATCTCAATCCCTGAGCCACAGCGTGTCGCCCTCTTCCCTAGAGGTTGGAGTAGTTCTAAAAGGGAATTCTATGTTGGAGATGTCGTACCCGTTAGGTCAAACCGGGGCGCATTCGGTTTTAGAAATGTCGGGATCTGACAACCAAGCGACTCAATTGTGTGGAATGGATCTGGATGCGAGAGTGTTGAGGTACAGAGAGGAAAAGAAGAACCAGAAGTTCGAGAAGACAATCTGGTACGCTTCGAGAAAAGCTTATGCAGAAACCCGACCCAGAATCAAAGGTCGGTTCGCAAAACACGACGAAATGTATGGGTCGGGCGGTTCGTCTATCTGCTTGAGGCATCACAATGGGACGGCGGGTAGAGGCATGGAAATGGCGGTGGTGAGGCTCGTCGGACAAGACAACAATAAGAGGAGGGAAGAATATGGAATTTCCAGGAGCAAGAGTAATAGAAGGAGACAGAGGAATGTGAATGAGTGGTGTAATTTTGAAGAGGGAGATGAGGAATGTGGATGGGTAGTGTAA

Protein sequence

MPPPTVSLLQGTYLAVAVWFLVQKSGGGSSEDLNSGKMKLRRQESSRRFAREGEQLQLLLDPQGRPQNQIRRRAINDSVVPIQTKPLSTPENCFDIVCCISKLNSFGYQSQSLSHSVSPSSLEVGVVLKGNSMLEMSYPLGQTGAHSVLEMSGSDNQATQLCGMDLDARVLRYREEKKNQKFEKTIWYASRKAYAETRPRIKGRFAKHDEMYGSGGSSICLRHHNGTAGRGMEMAVVRLVGQDNNKRREEYGISRSKSNRRRQRNVNEWCNFEEGDEECGWVV

Homology

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BLAST of Moc11g29900 vs. NCBI nr
Match: XP_022134642.1 (zinc finger protein CONSTANS-LIKE 5 [Momordica charantia])

HSP 1 Score: 231.9 bits (590), Expect = 6.9e-57
Identity = 123/161 (76.40%), Postives = 134/161 (83.23%), Query Frame = 0


Query: 68  NQIRRRAINDSVVPIQTKPLSTPENCFDIVCCISKLNSFGYQSQSLSHSVSPSSLEVGVV 127
           N + + AINDSVVP+QTKPLSTPENCFDI  C SKLNSFGYQSQSLSHS+S SSLEVGVV
Sbjct: 197 NPVNQSAINDSVVPVQTKPLSTPENCFDIDFCRSKLNSFGYQSQSLSHSMSSSSLEVGVV 256

Query: 128 LKGNSMLEMSYPLGQTGAHSVLEMSGSDNQATQLCGMDLDARVLRYREEKKNQKFEKTIW 187
            +GNSM E+SYP GQT   S L MSGS NQATQLCGMD +ARVLRYRE++KN+KFEKTI 
Sbjct: 257 PEGNSMSEISYPSGQTMGDSGLAMSGSGNQATQLCGMDREARVLRYREKRKNRKFEKTIR 316

Query: 188 YASRKAYAETRPRIKGRFAKH-------DEMYGSGGSSICL 222
           YASRKAYAETRPRIKGRFAK        DEMYGSGGSS+ L
Sbjct: 317 YASRKAYAETRPRIKGRFAKRTDMLTEVDEMYGSGGSSMFL 357

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BLAST of Moc11g29900 vs. NCBI nr
Match: XP_038879797.1 (zinc finger protein CONSTANS-LIKE 5-like [Benincasa hispida])

HSP 1 Score: 212.6 bits (540), Expect = 4.4e-51
Identity = 118/166 (71.08%), Postives = 130/166 (78.31%), Query Frame = 0


Query: 74  AINDSVVPIQTKPLST--------PENCFDIVCCISKLNSFGYQSQSLSHSVSPSSLEVG 133
           AINDSVVP+QTKPLST        PENC+DI  C SKLNSFGYQ QSLSHSVS SSLEVG
Sbjct: 197 AINDSVVPVQTKPLSTPVINHTHSPENCYDIDFCRSKLNSFGYQPQSLSHSVSSSSLEVG 256

Query: 134 VVLKGNSMLEMSYPLGQT---GAHSVLEMSGSDNQATQLCGMDLDARVLRYREEKKNQKF 193
           VV +GNSM ++SYPLGQT   GA S L +SGS NQ TQLCGMD +ARVLRYRE++KN+KF
Sbjct: 257 VVPEGNSMSDISYPLGQTVNSGADSGLPLSGSGNQVTQLCGMDREARVLRYREKRKNRKF 316

Query: 194 EKTIWYASRKAYAETRPRIKGRFAKH-------DEMYGSGGSSICL 222
           EKTI YASRKAYAETRPRIKGRFAK        DE+YGS  SS+ L
Sbjct: 317 EKTIRYASRKAYAETRPRIKGRFAKRTDMLSEVDEIYGSAASSVFL 362

[Close]

BLAST of Moc11g29900 vs. NCBI nr
Match: XP_008453644.1 (PREDICTED: zinc finger protein CONSTANS-LIKE 5-like [Cucumis melo] >KAA0058321.1 zinc finger protein CONSTANS-LIKE 5-like [Cucumis melo var. makuwa] >TYK09482.1 zinc finger protein CONSTANS-LIKE 5-like [Cucumis melo var. makuwa])

HSP 1 Score: 211.1 bits (536), Expect = 1.3e-50
Identity = 117/166 (70.48%), Postives = 129/166 (77.71%), Query Frame = 0


Query: 74  AINDSVVPIQTKPLST--------PENCFDIVCCISKLNSFGYQSQSLSHSVSPSSLEVG 133
           AINDSVVP+QTKPL T        PENC+DI  C SKLNSFGYQ QSLSHSVS SSLEVG
Sbjct: 199 AINDSVVPVQTKPLPTPVTNHTHSPENCYDIDFCRSKLNSFGYQPQSLSHSVSSSSLEVG 258

Query: 134 VVLKGNSMLEMSYPLGQ---TGAHSVLEMSGSDNQATQLCGMDLDARVLRYREEKKNQKF 193
           VV +GNSM E+SYP+GQ   TGA S L +SG  NQATQLCGMD +ARVLRYRE++KN+KF
Sbjct: 259 VVPEGNSMSEISYPMGQNVSTGADSGLRLSGPGNQATQLCGMDREARVLRYREKRKNRKF 318

Query: 194 EKTIWYASRKAYAETRPRIKGRFAKH-------DEMYGSGGSSICL 222
           EKTI YASRKAYAETRPRIKGRFAK        DE+YGS  SS+ L
Sbjct: 319 EKTIRYASRKAYAETRPRIKGRFAKRTDMLSEVDEIYGSAASSVFL 364

[Close]

BLAST of Moc11g29900 vs. NCBI nr
Match: XP_011656660.1 (zinc finger protein CONSTANS-LIKE 5 [Cucumis sativus])

HSP 1 Score: 209.5 bits (532), Expect = 3.7e-50
Identity = 116/166 (69.88%), Postives = 130/166 (78.31%), Query Frame = 0


Query: 74  AINDSVVPIQTKPLST--------PENCFDIVCCISKLNSFGYQSQSLSHSVSPSSLEVG 133
           AINDSVVP+QTKPL T        PENC+DI  C SKLNSFGYQ QSLSHSVS SSLEVG
Sbjct: 199 AINDSVVPVQTKPLLTPVINQTHSPENCYDIDFCRSKLNSFGYQPQSLSHSVSSSSLEVG 258

Query: 134 VVLKGNSMLEMSYPLGQ---TGAHSVLEMSGSDNQATQLCGMDLDARVLRYREEKKNQKF 193
           VV +GNS+ ++SYP+GQ   TGA S L +SGS NQATQLCGMD +ARVLRYRE++KN+KF
Sbjct: 259 VVPEGNSVSDISYPMGQNVSTGADSGLPLSGSGNQATQLCGMDREARVLRYREKRKNRKF 318

Query: 194 EKTIWYASRKAYAETRPRIKGRFAKH-------DEMYGSGGSSICL 222
           EKTI YASRKAYAETRPRIKGRFAK        DE+YGS  SS+ L
Sbjct: 319 EKTIRYASRKAYAETRPRIKGRFAKRTDMLSEVDEIYGSAASSVFL 364

[Close]

BLAST of Moc11g29900 vs. NCBI nr
Match: KAE8653155.1 (hypothetical protein Csa_020132 [Cucumis sativus])

HSP 1 Score: 209.5 bits (532), Expect = 3.7e-50
Identity = 116/166 (69.88%), Postives = 129/166 (77.71%), Query Frame = 0


Query: 74  AINDSVVPIQTKPLST--------PENCFDIVCCISKLNSFGYQSQSLSHSVSPSSLEVG 133
           AINDSVVP+QTKPL T        PENC+DI  C SKLNSFGYQ QSLSHSVS SSLEVG
Sbjct: 199 AINDSVVPVQTKPLLTPVINQTHSPENCYDIDFCRSKLNSFGYQPQSLSHSVSSSSLEVG 258

Query: 134 VVLKGNSMLEMSYPLGQ---TGAHSVLEMSGSDNQATQLCGMDLDARVLRYREEKKNQKF 193
           VV +GNS+ ++SYP+GQ   TGA S L +SGS NQATQLCGMD +ARVLRYRE++KN+KF
Sbjct: 259 VVPEGNSVSDISYPMGQNVSTGADSGLPLSGSGNQATQLCGMDREARVLRYREKRKNRKF 318

Query: 194 EKTIWYASRKAYAETRPRIKGRFAKH-------DEMYGSGGSSICL 222
           EKTI YASRKAYAETRPRIKGRFAK        DEMYGS  S + L
Sbjct: 319 EKTIRYASRKAYAETRPRIKGRFAKRTDMLSEVDEMYGSAASHVLL 364

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BLAST of Moc11g29900 vs. ExPASy Swiss-Prot
Match: Q9FHH8 (Zinc finger protein CONSTANS-LIKE 5 OS=Arabidopsis thaliana OX=3702 GN=COL5 PE=2 SV=2)

HSP 1 Score: 133.7 bits (335), Expect = 3.4e-30
Identity = 79/147 (53.74%), Postives = 101/147 (68.71%), Query Frame = 0


Query: 68  NQIRRRAINDSVVPIQTK----PLSTPENCFDIVCCISKLNSFGYQSQSLSHSVSPSSLE 127
           N  +  A  DS+VP+QTK    PL+  ++CFDI  C SKL++F Y SQS+SHSVS SS+E
Sbjct: 192 NHHQNNAGGDSLVPVQTKTEPLPLTNNDHCFDIDFCRSKLSAFTYPSQSVSHSVSTSSIE 251

Query: 128 VGVVLKGNSMLEMSYPLGQTGAHSVLEMSGSDNQATQLCGMDLDARVLRYREEKKNQKFE 187
            GVV  GN+   ++       +      +G D+QA+    MD +ARVLRYRE++KN+KFE
Sbjct: 252 YGVVPDGNTNNSVN------RSTITSSTTGGDHQAS---SMDREARVLRYREKRKNRKFE 311

Query: 188 KTIWYASRKAYAETRPRIKGRFAKHDE 211
           KTI YASRKAYAE+RPRIKGRFAK  E
Sbjct: 312 KTIRYASRKAYAESRPRIKGRFAKRTE 329

[Close]

BLAST of Moc11g29900 vs. ExPASy Swiss-Prot
Match: Q940T9 (Zinc finger protein CONSTANS-LIKE 4 OS=Arabidopsis thaliana OX=3702 GN=COL4 PE=2 SV=2)

HSP 1 Score: 112.8 bits (281), Expect = 6.2e-24
Identity = 72/153 (47.06%), Postives = 96/153 (62.75%), Query Frame = 0


Query: 77  DSVVPIQTKPLSTP---ENCFDI-VCCISKLNSFGYQSQSLSHSVSPSSLEVGVVLKGNS 136
           D VVP++ + +  P   ENCF++     SK  ++G     +SHSVS SS+EVGVV  G S
Sbjct: 205 DGVVPVENRTVRIPTVNENCFEMDFTGGSKGFTYGGGYNCISHSVSSSSMEVGVVPDGGS 264

Query: 137 MLEMSYPLGQTGAHSVLEMSGSD---NQATQLCGMDLDARVLRYREEKKNQKFEKTIWYA 196
           + ++SYP G          SG+D    +A  L   + +ARV+RYRE++KN+KFEKTI YA
Sbjct: 265 VADVSYPYGGPAT------SGADPGTQRAVPLTSAEREARVMRYREKRKNRKFEKTIRYA 324

Query: 197 SRKAYAETRPRIKGRFAKH------DEMYGSGG 217
           SRKAYAE RPRIKGRFAK       +++ G GG
Sbjct: 325 SRKAYAEMRPRIKGRFAKRTDTNESNDVVGHGG 351

[Close]

BLAST of Moc11g29900 vs. ExPASy Swiss-Prot
Match: Q9SK53 (Zinc finger protein CONSTANS-LIKE 3 OS=Arabidopsis thaliana OX=3702 GN=COL3 PE=1 SV=1)

HSP 1 Score: 92.4 bits (228), Expect = 8.6e-18
Identity = 64/173 (36.99%), Postives = 94/173 (54.34%), Query Frame = 0


Query: 50  AREGEQLQLLLDPQGRPQNQI---RRRAINDSVVPIQTKPLSTPENCFDIVCCISKLNSF 109
           A+EG ++  L      P+ ++      + ND VVP+Q K L   E+ F+     SK++  
Sbjct: 127 AKEGIEITNLFSDLDYPKIEVTSEENSSGNDGVVPVQNK-LFLNEDYFNFDLSASKISQQ 186

Query: 110 GYQSQSLSHSVSPSSLEVGVVLKGNSMLEMSYPLGQTGAHSVLEMSGSDNQATQLCGMDL 169
           G+    ++ +VS  +++V              PL         EM+ ++  A QL   + 
Sbjct: 187 GF--NFINQTVSTRTIDV--------------PLVPESGGVTAEMTNTETPAVQLSPAER 246

Query: 170 DARVLRYREEKKNQKFEKTIWYASRKAYAETRPRIKGRFAKHDEMYGSGGSSI 220
           +ARVLRYRE++KN+KFEKTI YASRKAYAE RPRIKGRFAK  +   + G  +
Sbjct: 247 EARVLRYREKRKNRKFEKTIRYASRKAYAEMRPRIKGRFAKRTDSRENDGGDV 282

[Close]

BLAST of Moc11g29900 vs. ExPASy Swiss-Prot
Match: Q96502 (Zinc finger protein CONSTANS-LIKE 2 OS=Arabidopsis thaliana OX=3702 GN=COL2 PE=1 SV=1)

HSP 1 Score: 90.1 bits (222), Expect = 4.3e-17
Identity = 62/143 (43.36%), Postives = 85/143 (59.44%), Query Frame = 0


Query: 77  DSVVPIQ----TKPLSTPENCFDIVCCISKLNSFGYQSQS---LSHSVSPSSLEVGVVLK 136
           D VVP+Q    T  L   +  F +       +   Y + S   L+HS S SS+++ VV +
Sbjct: 182 DGVVPLQVEESTSHLQQSQQNFQLGINYGFSSGAHYNNNSLKDLNHSASVSSMDISVVPE 241

Query: 137 GN-SMLEMSYPLGQTGAHSVLEMSGSDNQAT-QLCGMDLDARVLRYREEKKNQKFEKTIW 196
              S + + +P  +T   ++ ++SG   Q   QL  M+ +ARVLRYRE+KK +KF+KTI 
Sbjct: 242 STASDITVQHP--RTTKETIDQLSGPPTQVVQQLTPMEREARVLRYREKKKTRKFDKTIR 301

Query: 197 YASRKAYAETRPRIKGRFAKHDE 211
           YASRKAYAE RPRIKGRFAK  E
Sbjct: 302 YASRKAYAEIRPRIKGRFAKRIE 322

[Close]

BLAST of Moc11g29900 vs. ExPASy Swiss-Prot
Match: Q9FDX8 (Zinc finger protein HD1 OS=Oryza sativa subsp. japonica OX=39947 GN=HD1 PE=1 SV=1)

HSP 1 Score: 84.3 bits (207), Expect = 2.3e-15
Identity = 60/154 (38.96%), Postives = 88/154 (57.14%), Query Frame = 0


Query: 63  QGRPQNQIRRRAINDSVVPIQTKPLSTPENC-FDIV---CCISKLNSFGYQSQSLSHSVS 122
           Q   Q +   +  ++ VVP Q   LS  ++  + +V      S        + S+S+S+S
Sbjct: 219 QQEMQKEFAEKEGSECVVPSQITMLSEQQHSGYGVVGADQAASMTAGVSAYTDSISNSIS 278

Query: 123 PSSLEVGVVLKGNSMLEMSYPLGQTGAHSVLEMSGSDNQ-ATQLCGMDLDARVLRYREEK 182
            SS+E G+V   +++++M      T A ++   SG   Q +     MD +ARVLRYRE+K
Sbjct: 279 FSSMEAGIV-PDSTVIDMPNSRILTPAGAINLFSGPSLQMSLHFSSMDREARVLRYREKK 338

Query: 183 KNQKFEKTIWYASRKAYAETRPRIKGRFAKHDEM 212
           K +KFEKTI Y +RKAYAE RPRIKGRFAK  ++
Sbjct: 339 KARKFEKTIRYETRKAYAEARPRIKGRFAKRSDV 371

[Close]

BLAST of Moc11g29900 vs. ExPASy TrEMBL
Match: A0A6J1C060 (zinc finger protein CONSTANS-LIKE 5 OS=Momordica charantia OX=3673 GN=LOC111006865 PE=3 SV=1)

HSP 1 Score: 231.9 bits (590), Expect = 3.4e-57
Identity = 123/161 (76.40%), Postives = 134/161 (83.23%), Query Frame = 0


Query: 68  NQIRRRAINDSVVPIQTKPLSTPENCFDIVCCISKLNSFGYQSQSLSHSVSPSSLEVGVV 127
           N + + AINDSVVP+QTKPLSTPENCFDI  C SKLNSFGYQSQSLSHS+S SSLEVGVV
Sbjct: 197 NPVNQSAINDSVVPVQTKPLSTPENCFDIDFCRSKLNSFGYQSQSLSHSMSSSSLEVGVV 256

Query: 128 LKGNSMLEMSYPLGQTGAHSVLEMSGSDNQATQLCGMDLDARVLRYREEKKNQKFEKTIW 187
            +GNSM E+SYP GQT   S L MSGS NQATQLCGMD +ARVLRYRE++KN+KFEKTI 
Sbjct: 257 PEGNSMSEISYPSGQTMGDSGLAMSGSGNQATQLCGMDREARVLRYREKRKNRKFEKTIR 316

Query: 188 YASRKAYAETRPRIKGRFAKH-------DEMYGSGGSSICL 222
           YASRKAYAETRPRIKGRFAK        DEMYGSGGSS+ L
Sbjct: 317 YASRKAYAETRPRIKGRFAKRTDMLTEVDEMYGSGGSSMFL 357

[Close]

BLAST of Moc11g29900 vs. ExPASy TrEMBL
Match: A0A5A7UXW5 (Zinc finger protein CONSTANS-LIKE 5-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold499G00800 PE=3 SV=1)

HSP 1 Score: 211.1 bits (536), Expect = 6.1e-51
Identity = 117/166 (70.48%), Postives = 129/166 (77.71%), Query Frame = 0


Query: 74  AINDSVVPIQTKPLST--------PENCFDIVCCISKLNSFGYQSQSLSHSVSPSSLEVG 133
           AINDSVVP+QTKPL T        PENC+DI  C SKLNSFGYQ QSLSHSVS SSLEVG
Sbjct: 199 AINDSVVPVQTKPLPTPVTNHTHSPENCYDIDFCRSKLNSFGYQPQSLSHSVSSSSLEVG 258

Query: 134 VVLKGNSMLEMSYPLGQ---TGAHSVLEMSGSDNQATQLCGMDLDARVLRYREEKKNQKF 193
           VV +GNSM E+SYP+GQ   TGA S L +SG  NQATQLCGMD +ARVLRYRE++KN+KF
Sbjct: 259 VVPEGNSMSEISYPMGQNVSTGADSGLRLSGPGNQATQLCGMDREARVLRYREKRKNRKF 318

Query: 194 EKTIWYASRKAYAETRPRIKGRFAKH-------DEMYGSGGSSICL 222
           EKTI YASRKAYAETRPRIKGRFAK        DE+YGS  SS+ L
Sbjct: 319 EKTIRYASRKAYAETRPRIKGRFAKRTDMLSEVDEIYGSAASSVFL 364

[Close]

BLAST of Moc11g29900 vs. ExPASy TrEMBL
Match: A0A1S3BXX9 (zinc finger protein CONSTANS-LIKE 5-like OS=Cucumis melo OX=3656 GN=LOC103494297 PE=3 SV=1)

HSP 1 Score: 211.1 bits (536), Expect = 6.1e-51
Identity = 117/166 (70.48%), Postives = 129/166 (77.71%), Query Frame = 0


Query: 74  AINDSVVPIQTKPLST--------PENCFDIVCCISKLNSFGYQSQSLSHSVSPSSLEVG 133
           AINDSVVP+QTKPL T        PENC+DI  C SKLNSFGYQ QSLSHSVS SSLEVG
Sbjct: 199 AINDSVVPVQTKPLPTPVTNHTHSPENCYDIDFCRSKLNSFGYQPQSLSHSVSSSSLEVG 258

Query: 134 VVLKGNSMLEMSYPLGQ---TGAHSVLEMSGSDNQATQLCGMDLDARVLRYREEKKNQKF 193
           VV +GNSM E+SYP+GQ   TGA S L +SG  NQATQLCGMD +ARVLRYRE++KN+KF
Sbjct: 259 VVPEGNSMSEISYPMGQNVSTGADSGLRLSGPGNQATQLCGMDREARVLRYREKRKNRKF 318

Query: 194 EKTIWYASRKAYAETRPRIKGRFAKH-------DEMYGSGGSSICL 222
           EKTI YASRKAYAETRPRIKGRFAK        DE+YGS  SS+ L
Sbjct: 319 EKTIRYASRKAYAETRPRIKGRFAKRTDMLSEVDEIYGSAASSVFL 364

[Close]

BLAST of Moc11g29900 vs. ExPASy TrEMBL
Match: A0A0A0LUG1 (Zinc finger protein OS=Cucumis sativus OX=3659 GN=Csa_1G420320 PE=3 SV=1)

HSP 1 Score: 209.5 bits (532), Expect = 1.8e-50
Identity = 116/166 (69.88%), Postives = 130/166 (78.31%), Query Frame = 0


Query: 74  AINDSVVPIQTKPLST--------PENCFDIVCCISKLNSFGYQSQSLSHSVSPSSLEVG 133
           AINDSVVP+QTKPL T        PENC+DI  C SKLNSFGYQ QSLSHSVS SSLEVG
Sbjct: 199 AINDSVVPVQTKPLLTPVINQTHSPENCYDIDFCRSKLNSFGYQPQSLSHSVSSSSLEVG 258

Query: 134 VVLKGNSMLEMSYPLGQ---TGAHSVLEMSGSDNQATQLCGMDLDARVLRYREEKKNQKF 193
           VV +GNS+ ++SYP+GQ   TGA S L +SGS NQATQLCGMD +ARVLRYRE++KN+KF
Sbjct: 259 VVPEGNSVSDISYPMGQNVSTGADSGLPLSGSGNQATQLCGMDREARVLRYREKRKNRKF 318

Query: 194 EKTIWYASRKAYAETRPRIKGRFAKH-------DEMYGSGGSSICL 222
           EKTI YASRKAYAETRPRIKGRFAK        DE+YGS  SS+ L
Sbjct: 319 EKTIRYASRKAYAETRPRIKGRFAKRTDMLSEVDEIYGSAASSVFL 364

[Close]

BLAST of Moc11g29900 vs. ExPASy TrEMBL
Match: A0A6J1HNE0 (zinc finger protein CONSTANS-LIKE 5-like OS=Cucurbita maxima OX=3661 GN=LOC111465859 PE=3 SV=1)

HSP 1 Score: 206.1 bits (523), Expect = 2.0e-49
Identity = 115/163 (70.55%), Postives = 126/163 (77.30%), Query Frame = 0


Query: 74  AINDSVVPIQTKPLST--------PENCFDIVCCISKLNSFGYQSQSLSHSVSPSSLEVG 133
           AINDSVVP+QTKPLST        PENC+DI  C SKLNSFGYQ QSLSHSVS SSLEVG
Sbjct: 195 AINDSVVPVQTKPLSTPVINHTHSPENCYDIDFCRSKLNSFGYQPQSLSHSVSSSSLEVG 254

Query: 134 VVLKGNSMLEMSYPLGQT---GAHSVLEMSGSDNQATQLCGMDLDARVLRYREEKKNQKF 193
           VV +GNSM ++SYPLGQT   G  S L MS   NQATQLCG+D +ARVLRYRE++KN+KF
Sbjct: 255 VVPEGNSMSDISYPLGQTISNGTESGLPMSVPGNQATQLCGIDREARVLRYREKRKNRKF 314

Query: 194 EKTIWYASRKAYAETRPRIKGRFAKH-------DEMYGSGGSS 219
           EKTI YASRKAYAETRPR+KGRFAK        DEMYGS  SS
Sbjct: 315 EKTIRYASRKAYAETRPRVKGRFAKRSDALSEVDEMYGSAASS 357

[Close]

BLAST of Moc11g29900 vs. TAIR 10
Match: AT5G57660.1 (CONSTANS-like 5 )

HSP 1 Score: 133.7 bits (335), Expect = 2.4e-31
Identity = 79/147 (53.74%), Postives = 101/147 (68.71%), Query Frame = 0


Query: 68  NQIRRRAINDSVVPIQTK----PLSTPENCFDIVCCISKLNSFGYQSQSLSHSVSPSSLE 127
           N  +  A  DS+VP+QTK    PL+  ++CFDI  C SKL++F Y SQS+SHSVS SS+E
Sbjct: 192 NHHQNNAGGDSLVPVQTKTEPLPLTNNDHCFDIDFCRSKLSAFTYPSQSVSHSVSTSSIE 251

Query: 128 VGVVLKGNSMLEMSYPLGQTGAHSVLEMSGSDNQATQLCGMDLDARVLRYREEKKNQKFE 187
            GVV  GN+   ++       +      +G D+QA+    MD +ARVLRYRE++KN+KFE
Sbjct: 252 YGVVPDGNTNNSVN------RSTITSSTTGGDHQAS---SMDREARVLRYREKRKNRKFE 311

Query: 188 KTIWYASRKAYAETRPRIKGRFAKHDE 211
           KTI YASRKAYAE+RPRIKGRFAK  E
Sbjct: 312 KTIRYASRKAYAESRPRIKGRFAKRTE 329

[Close]

BLAST of Moc11g29900 vs. TAIR 10
Match: AT5G24930.1 (CONSTANS-like 4 )

HSP 1 Score: 112.8 bits (281), Expect = 4.4e-25
Identity = 72/153 (47.06%), Postives = 96/153 (62.75%), Query Frame = 0


Query: 77  DSVVPIQTKPLSTP---ENCFDI-VCCISKLNSFGYQSQSLSHSVSPSSLEVGVVLKGNS 136
           D VVP++ + +  P   ENCF++     SK  ++G     +SHSVS SS+EVGVV  G S
Sbjct: 249 DGVVPVENRTVRIPTVNENCFEMDFTGGSKGFTYGGGYNCISHSVSSSSMEVGVVPDGGS 308

Query: 137 MLEMSYPLGQTGAHSVLEMSGSD---NQATQLCGMDLDARVLRYREEKKNQKFEKTIWYA 196
           + ++SYP G          SG+D    +A  L   + +ARV+RYRE++KN+KFEKTI YA
Sbjct: 309 VADVSYPYGGPAT------SGADPGTQRAVPLTSAEREARVMRYREKRKNRKFEKTIRYA 368

Query: 197 SRKAYAETRPRIKGRFAKH------DEMYGSGG 217
           SRKAYAE RPRIKGRFAK       +++ G GG
Sbjct: 369 SRKAYAEMRPRIKGRFAKRTDTNESNDVVGHGG 395

[Close]

BLAST of Moc11g29900 vs. TAIR 10
Match: AT2G24790.1 (CONSTANS-like 3 )

HSP 1 Score: 92.4 bits (228), Expect = 6.1e-19
Identity = 64/173 (36.99%), Postives = 94/173 (54.34%), Query Frame = 0


Query: 50  AREGEQLQLLLDPQGRPQNQI---RRRAINDSVVPIQTKPLSTPENCFDIVCCISKLNSF 109
           A+EG ++  L      P+ ++      + ND VVP+Q K L   E+ F+     SK++  
Sbjct: 127 AKEGIEITNLFSDLDYPKIEVTSEENSSGNDGVVPVQNK-LFLNEDYFNFDLSASKISQQ 186

Query: 110 GYQSQSLSHSVSPSSLEVGVVLKGNSMLEMSYPLGQTGAHSVLEMSGSDNQATQLCGMDL 169
           G+    ++ +VS  +++V              PL         EM+ ++  A QL   + 
Sbjct: 187 GF--NFINQTVSTRTIDV--------------PLVPESGGVTAEMTNTETPAVQLSPAER 246

Query: 170 DARVLRYREEKKNQKFEKTIWYASRKAYAETRPRIKGRFAKHDEMYGSGGSSI 220
           +ARVLRYRE++KN+KFEKTI YASRKAYAE RPRIKGRFAK  +   + G  +
Sbjct: 247 EARVLRYREKRKNRKFEKTIRYASRKAYAEMRPRIKGRFAKRTDSRENDGGDV 282

[Close]

BLAST of Moc11g29900 vs. TAIR 10
Match: AT3G02380.1 (CONSTANS-like 2 )

HSP 1 Score: 90.1 bits (222), Expect = 3.0e-18
Identity = 62/143 (43.36%), Postives = 85/143 (59.44%), Query Frame = 0


Query: 77  DSVVPIQ----TKPLSTPENCFDIVCCISKLNSFGYQSQS---LSHSVSPSSLEVGVVLK 136
           D VVP+Q    T  L   +  F +       +   Y + S   L+HS S SS+++ VV +
Sbjct: 182 DGVVPLQVEESTSHLQQSQQNFQLGINYGFSSGAHYNNNSLKDLNHSASVSSMDISVVPE 241

Query: 137 GN-SMLEMSYPLGQTGAHSVLEMSGSDNQAT-QLCGMDLDARVLRYREEKKNQKFEKTIW 196
              S + + +P  +T   ++ ++SG   Q   QL  M+ +ARVLRYRE+KK +KF+KTI 
Sbjct: 242 STASDITVQHP--RTTKETIDQLSGPPTQVVQQLTPMEREARVLRYREKKKTRKFDKTIR 301

Query: 197 YASRKAYAETRPRIKGRFAKHDE 211
           YASRKAYAE RPRIKGRFAK  E
Sbjct: 302 YASRKAYAEIRPRIKGRFAKRIE 322

[Close]

BLAST of Moc11g29900 vs. TAIR 10
Match: AT5G15840.1 (B-box type zinc finger protein with CCT domain )

HSP 1 Score: 82.0 bits (201), Expect = 8.3e-16
Identity = 53/119 (44.54%), Postives = 74/119 (62.18%), Query Frame = 0


Query: 112 SLSHSVSPSSLEVGVVLKGNS-MLEMSYPLGQTGAHSVLEMSGSDNQ---ATQLCGMDLD 171
           S++H+   SS+E GVV +  + +   S+P  +T   +V +     +Q    TQL  MD +
Sbjct: 250 SINHNAYISSMETGVVPESTACVTTASHP--RTPKGTVEQQPDPASQMITVTQLSPMDRE 309

Query: 172 ARVLRYREEKKNQKFEKTIWYASRKAYAETRPRIKGRFAKHDEMYGSGGSSICLRHHNG 227
           ARVLRYRE++K +KFEKTI YASRKAYAE RPR+ GRFAK +      G +  L ++ G
Sbjct: 310 ARVLRYREKRKTRKFEKTIRYASRKAYAEIRPRVNGRFAKREIEAEEQGFNTMLMYNTG 366

The following BLAST results are available for this feature:

BLAST of Moc11g29900 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022134642.1	6.9e-57	76.40	zinc finger protein CONSTANS-LIKE 5 [Momordica charantia]	[more]
XP_038879797.1	4.4e-51	71.08	zinc finger protein CONSTANS-LIKE 5-like [Benincasa hispida]	[more]
XP_008453644.1	1.3e-50	70.48	PREDICTED: zinc finger protein CONSTANS-LIKE 5-like [Cucumis melo] >KAA0058321.1...	[more]
XP_011656660.1	3.7e-50	69.88	zinc finger protein CONSTANS-LIKE 5 [Cucumis sativus]	[more]
KAE8653155.1	3.7e-50	69.88	hypothetical protein Csa_020132 [Cucumis sativus]	[more]

BLAST of Moc11g29900 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FHH8	3.4e-30	53.74	Zinc finger protein CONSTANS-LIKE 5 OS=Arabidopsis thaliana OX=3702 GN=COL5 PE=2...	[more]
Q940T9	6.2e-24	47.06	Zinc finger protein CONSTANS-LIKE 4 OS=Arabidopsis thaliana OX=3702 GN=COL4 PE=2...	[more]
Q9SK53	8.6e-18	36.99	Zinc finger protein CONSTANS-LIKE 3 OS=Arabidopsis thaliana OX=3702 GN=COL3 PE=1...	[more]
Q96502	4.3e-17	43.36	Zinc finger protein CONSTANS-LIKE 2 OS=Arabidopsis thaliana OX=3702 GN=COL2 PE=1...	[more]
Q9FDX8	2.3e-15	38.96	Zinc finger protein HD1 OS=Oryza sativa subsp. japonica OX=39947 GN=HD1 PE=1 SV=...	[more]

BLAST of Moc11g29900 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1C060	3.4e-57	76.40	zinc finger protein CONSTANS-LIKE 5 OS=Momordica charantia OX=3673 GN=LOC1110068...	[more]
A0A5A7UXW5	6.1e-51	70.48	Zinc finger protein CONSTANS-LIKE 5-like OS=Cucumis melo var. makuwa OX=1194695 ...	[more]
A0A1S3BXX9	6.1e-51	70.48	zinc finger protein CONSTANS-LIKE 5-like OS=Cucumis melo OX=3656 GN=LOC103494297...	[more]
A0A0A0LUG1	1.8e-50	69.88	Zinc finger protein OS=Cucumis sativus OX=3659 GN=Csa_1G420320 PE=3 SV=1	[more]
A0A6J1HNE0	2.0e-49	70.55	zinc finger protein CONSTANS-LIKE 5-like OS=Cucurbita maxima OX=3661 GN=LOC11146...	[more]

BLAST of Moc11g29900 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G57660.1	2.4e-31	53.74	CONSTANS-like 5	[more]
AT5G24930.1	4.4e-25	47.06	CONSTANS-like 4	[more]
AT2G24790.1	6.1e-19	36.99	CONSTANS-like 3	[more]
AT3G02380.1	3.0e-18	43.36	CONSTANS-like 2	[more]
AT5G15840.1	8.3e-16	44.54	B-box type zinc finger protein with CCT domain	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR010402	CCT domain	PFAM	PF06203	CCT	coord: 168..208 e-value: 4.7E-15 score: 55.4
IPR010402	CCT domain	PROSITE	PS51017	CCT	coord: 166..208 score: 14.098206
None	No IPR available	PANTHER	PTHR31319	ZINC FINGER PROTEIN CONSTANS-LIKE 4	coord: 32..211
None	No IPR available	PANTHER	PTHR31319:SF53	ZINC FINGER PROTEIN CONSTANS-LIKE 5	coord: 32..211

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc11g29900.1	Moc11g29900.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009909	regulation of flower development
cellular_component	GO:0005634	nucleus
molecular_function	GO:0005515	protein binding
molecular_function	GO:0008270	zinc ion binding