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Moc11g29520 (gene) Bitter gourd (OHB3-1) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGTCCACGTCTCCTTCTACAGGAACTGTAAGTATACGCTCAACAATCTCTTCAAAGATCCGCTATGAATCCTTATTCTCATCGCCACTTTTTTTCGTTTCTTGTTCGTCATTCTTTGATCTGCAACTTGGGAGAACCGGCGGTTTTTAATTACATTAGGATCATACTAAAATTGATAGAGTCCCAGATTTTGACTCTGATTAATGAGTTTTGGAACCCTTTTTCAGTTGGATGCCAACGAATGTTTCACTTGTTCGATTGTTGAGCATGTTGTAAAATCAGTGAGATTGGATACAGAGGAGTTATCATGCTTGTTTCTTTCTTTCTAGTTTTTGGTTACCATATGGAATGGAGATTATAACCTCTTAAACTTCATTTTTTTGAATATAATGCTTTATGATTTGCCTGATTCTTGTGGTTTTACTGAGAGCCATGGTGATTGAATTGTGGGTTCTAATTTCTATAGATGGGAAGACTTTCAAGAAACCCCGACGCCCTTATGAGAAGGAGCGTTTGGATGCTGAGCTTAAATTGGTTGGTGAATATGGGCTTCGTTGTAAGAGGGAGCTATGGAGGGTTCAATACGCACTGAGCCGAATTCGTAACAATGCACGTATGCTTTTAACACTCGACGAAAAGAACCCACGTAGGATTTTTGAGGGAGAGGCGCTGCTGAGGAGGATGAACAGGTACGGTCTTTTGGACGAGAGCCAGAACAAGCTTGATTATGTCTTGGCTCTTACTGTGGAGAATTTCCTTGAGCGTCGTCTCCAAACTCTTGTGTTCAAGTCTGGTATGGCAAAGTCTATCCACCATGCTAGAGTTCTCATCAGGCAGAGGCATATAAGGTAGAGTGGCTTCATTATCTTTTTCTCAGAAGAATTATACAGAGTTTATGTACTTTTGCATTCTATTAATTCATACCAATAATAACATTCTTTTTTCCATTTGACTGTTTTAATTCTTTGTTTTTGCTTTGTGGTTGATGATCAACTGTCAACTATATTTTTTCTGAGAATTGAAAGTTGTTTTGCTGGCTGCTTTTGCAAAATAAGGAGCACAGTATTGTTCTGCATTTATTTCTGTCCTCTAAAAGCTATGTTTGGGTGTGCTTCATGACATGGTTAAAAGTGCATTATAATATATAAAACACTTACTCAAAGTTATCATTTTTGAGAATTACATAAAAATGCTTTGGAAGAATGTTAAAAGCAGTTGCAATGCTTTGTAAGTAAGCACTGGTGGAGTGCTTAACCAAACCTTGAGTGATTTGTGATTAAACACTTTTTAACTCAAGTGCTTATTAGTTAAAAGCAGTCTAAAATATACTCTTGCTCAATTGATATTTATGTTGGCTTTGGAGCCTTTGAAGCATCGGTTGTTAATGTTTTCATCTGTCACATTTGTCGTCTTAGGGTTGGGAGGCAGGTGGTTAACATCCCTTCTTTCATGGTGAGGGTTGATTCTCAAAAGCACATTGACTTCTCTCTCACAAGTCCGTTCGGAGGTGGACGCCCCGGAAGAGTGAAGAGAAAGAACCAGAAGGTGGCTGCCAAGAAGGCTGCTGGTGGAGATGGAGATGAGGAAGATGAAGATTGA ATGGTCCACGTCTCCTTCTACAGGAACTATGGGAAGACTTTCAAGAAACCCCGACGCCCTTATGAGAAGGAGCGTTTGGATGCTGAGCTTAAATTGGTTGGTGAATATGGGCTTCGTTGTAAGAGGGAGCTATGGAGGGTTCAATACGCACTGAGCCGAATTCGTAACAATGCACGTATGCTTTTAACACTCGACGAAAAGAACCCACGTAGGATTTTTGAGGGAGAGGCGCTGCTGAGGAGGATGAACAGGTACGGTCTTTTGGACGAGAGCCAGAACAAGCTTGATTATGTCTTGGCTCTTACTGTGGAGAATTTCCTTGAGCGTCGTCTCCAAACTCTTGTGTTCAAGTCTGGTATGGCAAAGTCTATCCACCATGCTAGAGTTCTCATCAGGCAGAGGCATATAAGGGTTGGGAGGCAGGTGGTTAACATCCCTTCTTTCATGGTGAGGGTTGATTCTCAAAAGCACATTGACTTCTCTCTCACAAGTCCGTTCGGAGGTGGACGCCCCGGAAGAGTGAAGAGAAAGAACCAGAAGGTGGCTGCCAAGAAGGCTGCTGGTGGAGATGGAGATGAGGAAGATGAAGATTGA ATGGTCCACGTCTCCTTCTACAGGAACTATGGGAAGACTTTCAAGAAACCCCGACGCCCTTATGAGAAGGAGCGTTTGGATGCTGAGCTTAAATTGGTTGGTGAATATGGGCTTCGTTGTAAGAGGGAGCTATGGAGGGTTCAATACGCACTGAGCCGAATTCGTAACAATGCACGTATGCTTTTAACACTCGACGAAAAGAACCCACGTAGGATTTTTGAGGGAGAGGCGCTGCTGAGGAGGATGAACAGGTACGGTCTTTTGGACGAGAGCCAGAACAAGCTTGATTATGTCTTGGCTCTTACTGTGGAGAATTTCCTTGAGCGTCGTCTCCAAACTCTTGTGTTCAAGTCTGGTATGGCAAAGTCTATCCACCATGCTAGAGTTCTCATCAGGCAGAGGCATATAAGGGTTGGGAGGCAGGTGGTTAACATCCCTTCTTTCATGGTGAGGGTTGATTCTCAAAAGCACATTGACTTCTCTCTCACAAGTCCGTTCGGAGGTGGACGCCCCGGAAGAGTGAAGAGAAAGAACCAGAAGGTGGCTGCCAAGAAGGCTGCTGGTGGAGATGGAGATGAGGAAGATGAAGATTGA MVHVSFYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNNARMLLTLDEKNPRRIFEGEALLRRMNRYGLLDESQNKLDYVLALTVENFLERRLQTLVFKSGMAKSIHHARVLIRQRHIRVGRQVVNIPSFMVRVDSQKHIDFSLTSPFGGGRPGRVKRKNQKVAAKKAAGGDGDEEDED Homology
BLAST of Moc11g29520 vs. NCBI nr
Match: XP_022141887.1 (40S ribosomal protein S9-2-like [Momordica charantia]) HSP 1 Score: 387.5 bits (994), Expect = 6.9e-104 Identity = 197/197 (100.00%), Postives = 197/197 (100.00%), Query Frame = 0
BLAST of Moc11g29520 vs. NCBI nr
Match: XP_022142910.1 (40S ribosomal protein S9-2 [Momordica charantia] >XP_022151237.1 40S ribosomal protein S9-2 [Momordica charantia] >XP_038893425.1 40S ribosomal protein S9-2 [Benincasa hispida]) HSP 1 Score: 386.0 bits (990), Expect = 2.0e-103 Identity = 196/197 (99.49%), Postives = 196/197 (99.49%), Query Frame = 0
BLAST of Moc11g29520 vs. NCBI nr
Match: XP_004135180.1 (40S ribosomal protein S9-2 [Cucumis sativus] >XP_004141548.1 40S ribosomal protein S9-2 [Cucumis sativus] >XP_008446334.1 PREDICTED: 40S ribosomal protein S9-2 [Cucumis melo] >XP_008459594.1 PREDICTED: 40S ribosomal protein S9-2 [Cucumis melo] >XP_022925366.1 40S ribosomal protein S9-2-like [Cucurbita moschata] >XP_022957390.1 40S ribosomal protein S9-2-like [Cucurbita moschata] >XP_022973538.1 40S ribosomal protein S9-2-like [Cucurbita maxima] >XP_022987602.1 40S ribosomal protein S9-2-like [Cucurbita maxima] >XP_023535520.1 40S ribosomal protein S9-2-like [Cucurbita pepo subsp. pepo] >XP_023552855.1 40S ribosomal protein S9-2-like [Cucurbita pepo subsp. pepo] >XP_038891088.1 40S ribosomal protein S9-2-like [Benincasa hispida] >KAA0034405.1 40S ribosomal protein S9-2-like [Cucumis melo var. makuwa] >KAG6592358.1 40S ribosomal protein S9-2, partial [Cucurbita argyrosperma subsp. sororia] >KAA0039283.1 40S ribosomal protein S9-2-like [Cucumis melo var. makuwa] >KAG6601424.1 40S ribosomal protein S9-2, partial [Cucurbita argyrosperma subsp. sororia] >KGN51904.1 hypothetical protein Csa_008331 [Cucumis sativus]) HSP 1 Score: 384.8 bits (987), Expect = 4.5e-103 Identity = 195/197 (98.98%), Postives = 196/197 (99.49%), Query Frame = 0
BLAST of Moc11g29520 vs. NCBI nr
Match: XP_024018555.1 (40S ribosomal protein S9-2 [Morus notabilis] >PON71929.1 Ribosomal protein [Parasponia andersonii] >PON83707.1 Ribosomal protein [Trema orientale]) HSP 1 Score: 384.8 bits (987), Expect = 4.5e-103 Identity = 195/197 (98.98%), Postives = 196/197 (99.49%), Query Frame = 0
BLAST of Moc11g29520 vs. NCBI nr
Match: XP_015883538.1 (40S ribosomal protein S9-2 [Ziziphus jujuba]) HSP 1 Score: 383.6 bits (984), Expect = 9.9e-103 Identity = 194/197 (98.48%), Postives = 196/197 (99.49%), Query Frame = 0
BLAST of Moc11g29520 vs. ExPASy Swiss-Prot
Match: Q9FLF0 (40S ribosomal protein S9-2 OS=Arabidopsis thaliana OX=3702 GN=RPS9C PE=1 SV=1) HSP 1 Score: 360.1 bits (923), Expect = 1.5e-98 Identity = 179/197 (90.86%), Postives = 191/197 (96.95%), Query Frame = 0
BLAST of Moc11g29520 vs. ExPASy Swiss-Prot
Match: Q9LXG1 (40S ribosomal protein S9-1 OS=Arabidopsis thaliana OX=3702 GN=RPS9B PE=1 SV=1) HSP 1 Score: 342.0 bits (876), Expect = 4.4e-93 Identity = 173/198 (87.37%), Postives = 189/198 (95.45%), Query Frame = 0
BLAST of Moc11g29520 vs. ExPASy Swiss-Prot
Match: P52810 (40S ribosomal protein S9 OS=Podospora anserina OX=2587412 GN=RPS9 PE=3 SV=1) HSP 1 Score: 270.0 bits (689), Expect = 2.1e-71 Identity = 141/191 (73.82%), Postives = 164/191 (85.86%), Query Frame = 0
BLAST of Moc11g29520 vs. ExPASy Swiss-Prot
Match: A6QLG5 (40S ribosomal protein S9 OS=Bos taurus OX=9913 GN=RPS9 PE=2 SV=1) HSP 1 Score: 263.5 bits (672), Expect = 2.0e-69 Identity = 133/184 (72.28%), Postives = 155/184 (84.24%), Query Frame = 0
BLAST of Moc11g29520 vs. ExPASy Swiss-Prot
Match: P46781 (40S ribosomal protein S9 OS=Homo sapiens OX=9606 GN=RPS9 PE=1 SV=3) HSP 1 Score: 263.5 bits (672), Expect = 2.0e-69 Identity = 133/184 (72.28%), Postives = 155/184 (84.24%), Query Frame = 0
BLAST of Moc11g29520 vs. ExPASy TrEMBL
Match: A0A6J1CL41 (40S ribosomal protein S9-2-like OS=Momordica charantia OX=3673 GN=LOC111012141 PE=3 SV=1) HSP 1 Score: 387.5 bits (994), Expect = 3.3e-104 Identity = 197/197 (100.00%), Postives = 197/197 (100.00%), Query Frame = 0
BLAST of Moc11g29520 vs. ExPASy TrEMBL
Match: A0A6J1DCX8 (40S ribosomal protein S9-2 OS=Momordica charantia OX=3673 GN=LOC111019211 PE=3 SV=1) HSP 1 Score: 386.0 bits (990), Expect = 9.7e-104 Identity = 196/197 (99.49%), Postives = 196/197 (99.49%), Query Frame = 0
BLAST of Moc11g29520 vs. ExPASy TrEMBL
Match: A0A6J1JAT4 (40S ribosomal protein S9-2-like OS=Cucurbita maxima OX=3661 GN=LOC111485110 PE=3 SV=1) HSP 1 Score: 384.8 bits (987), Expect = 2.2e-103 Identity = 195/197 (98.98%), Postives = 196/197 (99.49%), Query Frame = 0
BLAST of Moc11g29520 vs. ExPASy TrEMBL
Match: A0A0A0KSN1 (S4 RNA-binding domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G604980 PE=3 SV=1) HSP 1 Score: 384.8 bits (987), Expect = 2.2e-103 Identity = 195/197 (98.98%), Postives = 196/197 (99.49%), Query Frame = 0
BLAST of Moc11g29520 vs. ExPASy TrEMBL
Match: A0A1S3CA34 (40S ribosomal protein S9-2 OS=Cucumis melo OX=3656 GN=LOC103498678 PE=3 SV=1) HSP 1 Score: 384.8 bits (987), Expect = 2.2e-103 Identity = 195/197 (98.98%), Postives = 196/197 (99.49%), Query Frame = 0
BLAST of Moc11g29520 vs. TAIR 10
Match: AT5G39850.1 (Ribosomal protein S4 ) HSP 1 Score: 360.1 bits (923), Expect = 1.1e-99 Identity = 179/197 (90.86%), Postives = 191/197 (96.95%), Query Frame = 0
BLAST of Moc11g29520 vs. TAIR 10
Match: AT5G15200.1 (Ribosomal protein S4 ) HSP 1 Score: 342.0 bits (876), Expect = 3.1e-94 Identity = 173/198 (87.37%), Postives = 189/198 (95.45%), Query Frame = 0
BLAST of Moc11g29520 vs. TAIR 10
Match: AT5G15200.2 (Ribosomal protein S4 ) HSP 1 Score: 250.4 bits (638), Expect = 1.2e-66 Identity = 126/137 (91.97%), Postives = 132/137 (96.35%), Query Frame = 0
BLAST of Moc11g29520 vs. TAIR 10
Match: AT5G15750.1 (Alpha-L RNA-binding motif/Ribosomal protein S4 family protein ) HSP 1 Score: 42.0 bits (97), Expect = 6.6e-04 Identity = 29/130 (22.31%), Postives = 61/130 (46.92%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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