Moc11g29460 (gene) Bitter gourd (OHB3-1) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGTGTGAGGCCGAAGCTTTCGGGGCTGCAAAAGCAGGTGCTCAGTCTCTACAGAGGATTTCTACGAGCGGCGCGCTCCAAATCCGCCGAAGATCGGCGGCAGATGGAATCGCTCGTCGCCGCCGAGTTTCGCCGGAACGCCGACCAAATCGATCCCAAAAACTTCATCTACATCGAGTACCTCCTCCGCCGAGGTAACAAACAGCTGGATCAGCTCAAAAGCCCGGCCACTGTTCGATTGTCGTCGATGAATGTCTCAAACGCCAGATCCTGA ATGGGTGTGAGGCCGAAGCTTTCGGGGCTGCAAAAGCAGGTGCTCAGTCTCTACAGAGGATTTCTACGAGCGGCGCGCTCCAAATCCGCCGAAGATCGGCGGCAGATGGAATCGCTCGTCGCCGCCGAGTTTCGCCGGAACGCCGACCAAATCGATCCCAAAAACTTCATCTACATCGAGTACCTCCTCCGCCGAGGTAACAAACAGCTGGATCAGCTCAAAAGCCCGGCCACTGTTCGATTGTCGTCGATGAATGTCTCAAACGCCAGATCCTGA ATGGGTGTGAGGCCGAAGCTTTCGGGGCTGCAAAAGCAGGTGCTCAGTCTCTACAGAGGATTTCTACGAGCGGCGCGCTCCAAATCCGCCGAAGATCGGCGGCAGATGGAATCGCTCGTCGCCGCCGAGTTTCGCCGGAACGCCGACCAAATCGATCCCAAAAACTTCATCTACATCGAGTACCTCCTCCGCCGAGGTAACAAACAGCTGGATCAGCTCAAAAGCCCGGCCACTGTTCGATTGTCGTCGATGAATGTCTCAAACGCCAGATCCTGA MGVRPKLSGLQKQVLSLYRGFLRAARSKSAEDRRQMESLVAAEFRRNADQIDPKNFIYIEYLLRRGNKQLDQLKSPATVRLSSMNVSNARS Homology
BLAST of Moc11g29460 vs. NCBI nr
Match: XP_022141880.1 (succinate dehydrogenase assembly factor 1, mitochondrial [Momordica charantia]) HSP 1 Score: 173.3 bits (438), Expect = 9.4e-40 Identity = 91/91 (100.00%), Postives = 91/91 (100.00%), Query Frame = 0
BLAST of Moc11g29460 vs. NCBI nr
Match: XP_038999431.1 (succinate dehydrogenase assembly factor 1, mitochondrial-like [Hibiscus syriacus] >XP_038999436.1 succinate dehydrogenase assembly factor 1, mitochondrial-like [Hibiscus syriacus]) HSP 1 Score: 135.2 bits (339), Expect = 2.8e-28 Identity = 68/86 (79.07%), Postives = 81/86 (94.19%), Query Frame = 0
BLAST of Moc11g29460 vs. NCBI nr
Match: XP_008459591.1 (PREDICTED: succinate dehydrogenase assembly factor 1, mitochondrial [Cucumis melo]) HSP 1 Score: 135.2 bits (339), Expect = 2.8e-28 Identity = 70/80 (87.50%), Postives = 76/80 (95.00%), Query Frame = 0
BLAST of Moc11g29460 vs. NCBI nr
Match: XP_038890134.1 (succinate dehydrogenase assembly factor 1, mitochondrial [Benincasa hispida]) HSP 1 Score: 134.4 bits (337), Expect = 4.9e-28 Identity = 70/80 (87.50%), Postives = 75/80 (93.75%), Query Frame = 0
BLAST of Moc11g29460 vs. NCBI nr
Match: XP_011656085.1 (succinate dehydrogenase assembly factor 1, mitochondrial [Cucumis sativus] >KGN52665.1 hypothetical protein Csa_008140 [Cucumis sativus]) HSP 1 Score: 133.7 bits (335), Expect = 8.3e-28 Identity = 69/80 (86.25%), Postives = 75/80 (93.75%), Query Frame = 0
BLAST of Moc11g29460 vs. ExPASy Swiss-Prot
Match: B0K036 (Succinate dehydrogenase assembly factor 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Sdhaf1 PE=3 SV=1) HSP 1 Score: 52.8 bits (125), Expect = 2.4e-06 Identity = 34/70 (48.57%), Postives = 44/70 (62.86%), Query Frame = 0
BLAST of Moc11g29460 vs. ExPASy Swiss-Prot
Match: Q9US02 (Succinate dehydrogenase assembly factor 1, mitochondrial OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=SPAC664.12c PE=3 SV=1) HSP 1 Score: 51.2 bits (121), Expect = 7.1e-06 Identity = 29/70 (41.43%), Postives = 41/70 (58.57%), Query Frame = 0
BLAST of Moc11g29460 vs. ExPASy Swiss-Prot
Match: A6NFY7 (Succinate dehydrogenase assembly factor 1, mitochondrial OS=Homo sapiens OX=9606 GN=SDHAF1 PE=1 SV=1) HSP 1 Score: 50.4 bits (119), Expect = 1.2e-05 Identity = 33/68 (48.53%), Postives = 42/68 (61.76%), Query Frame = 0
BLAST of Moc11g29460 vs. ExPASy Swiss-Prot
Match: Q54HG5 (Succinate dehydrogenase assembly factor 1A, mitochondrial OS=Dictyostelium discoideum OX=44689 GN=sdhaf1A PE=3 SV=1) HSP 1 Score: 50.4 bits (119), Expect = 1.2e-05 Identity = 28/70 (40.00%), Postives = 42/70 (60.00%), Query Frame = 0
BLAST of Moc11g29460 vs. ExPASy Swiss-Prot
Match: A8PU71 (Succinate dehydrogenase assembly factor 1, mitochondrial OS=Bos taurus OX=9913 GN=SDHAF1 PE=3 SV=1) HSP 1 Score: 50.1 bits (118), Expect = 1.6e-05 Identity = 33/68 (48.53%), Postives = 42/68 (61.76%), Query Frame = 0
BLAST of Moc11g29460 vs. ExPASy TrEMBL
Match: A0A6J1CJC1 (succinate dehydrogenase assembly factor 1, mitochondrial OS=Momordica charantia OX=3673 GN=LOC111012137 PE=4 SV=1) HSP 1 Score: 173.3 bits (438), Expect = 4.6e-40 Identity = 91/91 (100.00%), Postives = 91/91 (100.00%), Query Frame = 0
BLAST of Moc11g29460 vs. ExPASy TrEMBL
Match: A0A1S3CAJ2 (succinate dehydrogenase assembly factor 1, mitochondrial OS=Cucumis melo OX=3656 GN=LOC103498675 PE=4 SV=1) HSP 1 Score: 135.2 bits (339), Expect = 1.4e-28 Identity = 70/80 (87.50%), Postives = 76/80 (95.00%), Query Frame = 0
BLAST of Moc11g29460 vs. ExPASy TrEMBL
Match: A0A0A0KST3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G649345 PE=4 SV=1) HSP 1 Score: 133.7 bits (335), Expect = 4.0e-28 Identity = 69/80 (86.25%), Postives = 75/80 (93.75%), Query Frame = 0
BLAST of Moc11g29460 vs. ExPASy TrEMBL
Match: A0A7N2LDJ5 (Uncharacterized protein OS=Quercus lobata OX=97700 PE=4 SV=1) HSP 1 Score: 132.5 bits (332), Expect = 8.9e-28 Identity = 67/83 (80.72%), Postives = 76/83 (91.57%), Query Frame = 0
BLAST of Moc11g29460 vs. ExPASy TrEMBL
Match: A0A6N2M6N5 (Uncharacterized protein OS=Salix viminalis OX=40686 GN=SVIM_LOCUS325582 PE=4 SV=1) HSP 1 Score: 129.0 bits (323), Expect = 9.9e-27 Identity = 67/86 (77.91%), Postives = 75/86 (87.21%), Query Frame = 0
BLAST of Moc11g29460 vs. TAIR 10
Match: AT2G39725.1 (LYR family of Fe/S cluster biogenesis protein ) HSP 1 Score: 112.1 bits (279), Expect = 2.4e-25 Identity = 57/86 (66.28%), Postives = 71/86 (82.56%), Query Frame = 0
BLAST of Moc11g29460 vs. TAIR 10
Match: AT2G39725.2 (LYR family of Fe/S cluster biogenesis protein ) HSP 1 Score: 112.1 bits (279), Expect = 2.4e-25 Identity = 57/86 (66.28%), Postives = 71/86 (82.56%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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