Moc11g28910 (gene) Bitter gourd (OHB3-1) v2

Overview


Name	Moc11g28910
Type	gene
Organism	Momordica charantia cv. OHB3-1 (Bitter gourd (OHB3-1) v2)
Description	DUF4219 domain-containing protein
Location	chr11: 21075204 .. 21076019 (-)
RNA-Seq Expression	Moc11g28910
Synteny	Moc11g28910

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGTTAGGATCAAAAAATCTTTTTTCACTGGCTCCACCTGTGTTTGATGGTGAAAACTACCAAGCATGGCCAATAAGAATACAAGCCTACATGGAGGGTTGTGATTATTGGGAAGCAATTGAGCAAGATTTTGAGATTGCTCCACTTCCTAATAACCCAAGAATAATGCATCAAATTAAGACTCATAAGAAGAGGGTCATAAGGAAAGCAAAAGCTCGAGCTTGCCTATATGCAGGTATGTCGCCCGCCATATTCAAAAGAATTATGGTCTTGAAGTCAGCAAAGGAGATCTAGGAGTTCCTCAAAAGTGAGTATGAAGGCGATGAGAGGATTAAAGGCATGAAGGTGTTTAACTTGGTGAGGGAATTCAAGAGAATGCAGATGAAGGATTTTTGGTCAATTAAAGAGTATTCAGACAAGTTGATTGGAATTGCTAACAAGGCAATGCATTAGGAATTGATCTATCTGACAAGAGATTGGTTCAGAAAGTTCTTGTTTCAATATCTGAAAGATATGAAGGAACCATTGCTTCCTTAGAAAATACTAAAGATCTCTTTAAACTCAAGGTGATAGAAGTAGTTAGTGCTTTAAAGCACAAAAGTAGATGAGGTTGATGAAGCAAGAAGGAAGCATTGAGGAGGCACTGAAAGCTAGATGCAGTAGGGAGAAGGTGGAAGAGAGAAGAAGTGGAAATGGAAGAAAGCAAGTGGCAATAGTAGCTCAAAATCCGCTGCAAAGGATGCTGGTAGCGCATTGTGGGAAGCAGAATCATCCACACTTCAGATGCTGGAGAAGGCCAGATGTGAAGTGTAG

mRNA sequence

ATGGAGTTAGGATCAAAAAATCTTTTTTCACTGGCTCCACCTGTGTTTGATGGTGAAAACTACCAAGCATGGCCAATAAGAATACAAGCCTACATGGAGGGTTGTGATTATTGGGAAGCAATTGAGCAAGATTTTGAGATTGCTCCACTTCCTAATAACCCAAGAATAATGCATCAAATTAAGACTCATAAGAAGAGGGTCATAAGGAAAGCAAAAGCTCGAGCTTGCCTATATGCAGGAATTGATCTATCTGACAAGAGATTGGTTCAGAAAGTTCTTGTTTCAATATCTGAAAGATATGAAGGAACCATTGCTTCCTTAGAAAATACTAAAGATCTCTTTAAACTCAAGGGAGAAGGTGGAAGAGAGAAGAAGTGGAAATGGAAGAAAGCAAGTGGCAATAGTAGCTCAAAATCCGCTGCAAAGGATGCTGGTAGCGCATTGTGGGAAGCAGAATCATCCACACTTCAGATGCTGGAGAAGGCCAGATGTGAAGTGTAG

Coding sequence (CDS)

ATGGAGTTAGGATCAAAAAATCTTTTTTCACTGGCTCCACCTGTGTTTGATGGTGAAAACTACCAAGCATGGCCAATAAGAATACAAGCCTACATGGAGGGTTGTGATTATTGGGAAGCAATTGAGCAAGATTTTGAGATTGCTCCACTTCCTAATAACCCAAGAATAATGCATCAAATTAAGACTCATAAGAAGAGGGTCATAAGGAAAGCAAAAGCTCGAGCTTGCCTATATGCAGGAATTGATCTATCTGACAAGAGATTGGTTCAGAAAGTTCTTGTTTCAATATCTGAAAGATATGAAGGAACCATTGCTTCCTTAGAAAATACTAAAGATCTCTTTAAACTCAAGGGAGAAGGTGGAAGAGAGAAGAAGTGGAAATGGAAGAAAGCAAGTGGCAATAGTAGCTCAAAATCCGCTGCAAAGGATGCTGGTAGCGCATTGTGGGAAGCAGAATCATCCACACTTCAGATGCTGGAGAAGGCCAGATGTGAAGTGTAG

Protein sequence

MELGSKNLFSLAPPVFDGENYQAWPIRIQAYMEGCDYWEAIEQDFEIAPLPNNPRIMHQIKTHKKRVIRKAKARACLYAGIDLSDKRLVQKVLVSISERYEGTIASLENTKDLFKLKGEGGREKKWKWKKASGNSSSKSAAKDAGSALWEAESSTLQMLEKARCEV

Homology

[Close]

BLAST of Moc11g28910 vs. NCBI nr
Match: XP_022151329.1 (uncharacterized protein LOC111019291 [Momordica charantia])

HSP 1 Score: 178.7 bits (452), Expect = 4.1e-41
Identity = 112/236 (47.46%), Postives = 116/236 (49.15%), Query Frame = 0


Query: 1   MELGSKNLFSLAPPVFDGENYQAWPIRIQAYMEGCDYWEAIEQDFEIAPLPNNPRIMHQI 60
           ME GS NL SLAPPVFDGENYQAW IRIQAYMEGCDYWEAIEQD+EIAPLP+NP  MHQI
Sbjct: 1   MEFGSNNLSSLAPPVFDGENYQAWTIRIQAYMEGCDYWEAIEQDYEIAPLPDNP-TMHQI 60

Query: 61  KTHKKRVIRKAKARACLYA----------------------------------------- 120
           KTHK RV RKAKARACLYA                                         
Sbjct: 61  KTHKVRVTRKAKARACLYAAVSPTIFNRIMALKSAKEIWEFLKSEYEGDERTKGMTVLNL 120

Query: 121 --------------------------------GIDLSDKRLVQKVLVSISERYEGTIASL 131
                                           G DLSD RLVQK+LVS+ ERYE TIASL
Sbjct: 121 VREFERMQMKDSESIKEYSDKLIGIANKARALGTDLSDNRLVQKILVSVPERYEATIASL 180

[Close]

BLAST of Moc11g28910 vs. NCBI nr
Match: XP_022158688.1 (uncharacterized protein LOC111025149 [Momordica charantia])

HSP 1 Score: 171.4 bits (433), Expect = 6.5e-39
Identity = 98/190 (51.58%), Postives = 106/190 (55.79%), Query Frame = 0


Query: 1   MELGSKNLFSLAPPVFDGENYQAWPIRIQAYMEGCDYWEAIEQDFEIAPLPNNPRIMHQI 60
           MELGS NL SLAPPVFDGENYQ W IRIQAYMEGCDYWEAIEQD+EIAPLP+NP  MHQI
Sbjct: 1   MELGSNNLSSLAPPVFDGENYQTWAIRIQAYMEGCDYWEAIEQDYEIAPLPDNP-TMHQI 60

Query: 61  KTHKKRVIRKAKARACLYA----------------------------------------- 118
           KTHK+RV RKAKARACLYA                                         
Sbjct: 61  KTHKERVTRKAKARACLYAAVSPAIFNRIMALKSAKEIWEFLKSEYEGDERIKGMKVLNL 120

[Close]

BLAST of Moc11g28910 vs. NCBI nr
Match: XP_022152365.1 (uncharacterized protein LOC111020109 [Momordica charantia])

HSP 1 Score: 167.2 bits (422), Expect = 1.2e-37
Identity = 96/189 (50.79%), Postives = 104/189 (55.03%), Query Frame = 0


Query: 1   MELGSKNLFSLAPPVFDGENYQAWPIRIQAYMEGCDYWEAIEQDFEIAPLPNNPRIMHQI 60
           MELGS NL SLAPPVFDGENYQAW IRIQAYMEGC+YWEAIEQD+EIAPLP+NP  MHQI
Sbjct: 1   MELGSNNLSSLAPPVFDGENYQAWAIRIQAYMEGCNYWEAIEQDYEIAPLPDNP-TMHQI 60

Query: 61  KTHKKRVIRKAKARACLYA----------------------------------------- 117
           KTHK+RV RKAKARACLYA                                         
Sbjct: 61  KTHKERVTRKAKARACLYAAVSPAIFNRIMALKSAKEIWEFLKSEYEGDERIKGMKVLNL 120

[Close]

BLAST of Moc11g28910 vs. NCBI nr
Match: TYK12310.1 (kinesin-like protein KIN-7K [Cucumis melo var. makuwa])

HSP 1 Score: 163.3 bits (412), Expect = 1.8e-36
Identity = 87/154 (56.49%), Postives = 99/154 (64.29%), Query Frame = 0


Query: 1   MELGSKNLFSLAPPVFDGENYQAWPIRIQAYMEGCDYWEAIEQDFEIAPLPNNPRIMHQI 60
           MELG  N  SLAPP+FDGENYQAW IR+QAYMEGCDYWEAIE+ +EIAP  +NP   +QI
Sbjct: 1   MELGLNNSTSLAPPMFDGENYQAWTIRMQAYMEGCDYWEAIEEGYEIAPFLDNP-TSNQI 60

Query: 61  KTHKKRVIRKAKARACLYA-------------------------------------GIDL 118
           KTHK+R+IRKAK RACLYA                                     G DL
Sbjct: 61  KTHKERIIRKAKTRACLYAAMSPSIFNRLMALESAKDICEFLKNKLIEIANKAKALGTDL 120

[Close]

BLAST of Moc11g28910 vs. NCBI nr
Match: XP_031392356.1 (uncharacterized protein LOC116204427 [Punica granatum])

HSP 1 Score: 154.1 bits (388), Expect = 1.1e-33
Identity = 86/190 (45.26%), Postives = 102/190 (53.68%), Query Frame = 0


Query: 1   MELGSKNLFSLAPPVFDGENYQAWPIRIQAYMEGCDYWEAIEQDFEIAPLPNNPRIMHQI 60
           ME GS  + +LAPPVFDGENY AW +R+QAYMEGCD+WEA+EQD+E+APLPNNP I +QI
Sbjct: 1   MESGSSTMSALAPPVFDGENYHAWAVRMQAYMEGCDFWEAVEQDYEVAPLPNNPTI-NQI 60

Query: 61  KTHKKRVIRKAKARACLYA----------------------------------------- 118
           K HK+RV +KAKA+ACLYA                                         
Sbjct: 61  KIHKERVTKKAKAKACLYAAVSPAIFTRIMVLGSAKEIWDFLEVEYRGNERIKGMKVLNL 120

[Close]

BLAST of Moc11g28910 vs. ExPASy TrEMBL
Match: A0A6J1DCR7 (uncharacterized protein LOC111019291 OS=Momordica charantia OX=3673 GN=LOC111019291 PE=4 SV=1)

HSP 1 Score: 178.7 bits (452), Expect = 2.0e-41
Identity = 112/236 (47.46%), Postives = 116/236 (49.15%), Query Frame = 0


Query: 1   MELGSKNLFSLAPPVFDGENYQAWPIRIQAYMEGCDYWEAIEQDFEIAPLPNNPRIMHQI 60
           ME GS NL SLAPPVFDGENYQAW IRIQAYMEGCDYWEAIEQD+EIAPLP+NP  MHQI
Sbjct: 1   MEFGSNNLSSLAPPVFDGENYQAWTIRIQAYMEGCDYWEAIEQDYEIAPLPDNP-TMHQI 60

Query: 61  KTHKKRVIRKAKARACLYA----------------------------------------- 120
           KTHK RV RKAKARACLYA                                         
Sbjct: 61  KTHKVRVTRKAKARACLYAAVSPTIFNRIMALKSAKEIWEFLKSEYEGDERTKGMTVLNL 120

Query: 121 --------------------------------GIDLSDKRLVQKVLVSISERYEGTIASL 131
                                           G DLSD RLVQK+LVS+ ERYE TIASL
Sbjct: 121 VREFERMQMKDSESIKEYSDKLIGIANKARALGTDLSDNRLVQKILVSVPERYEATIASL 180

[Close]

BLAST of Moc11g28910 vs. ExPASy TrEMBL
Match: A0A6J1DWT9 (uncharacterized protein LOC111025149 OS=Momordica charantia OX=3673 GN=LOC111025149 PE=4 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 3.2e-39
Identity = 98/190 (51.58%), Postives = 106/190 (55.79%), Query Frame = 0


Query: 1   MELGSKNLFSLAPPVFDGENYQAWPIRIQAYMEGCDYWEAIEQDFEIAPLPNNPRIMHQI 60
           MELGS NL SLAPPVFDGENYQ W IRIQAYMEGCDYWEAIEQD+EIAPLP+NP  MHQI
Sbjct: 1   MELGSNNLSSLAPPVFDGENYQTWAIRIQAYMEGCDYWEAIEQDYEIAPLPDNP-TMHQI 60

Query: 61  KTHKKRVIRKAKARACLYA----------------------------------------- 118
           KTHK+RV RKAKARACLYA                                         
Sbjct: 61  KTHKERVTRKAKARACLYAAVSPAIFNRIMALKSAKEIWEFLKSEYEGDERIKGMKVLNL 120

[Close]

BLAST of Moc11g28910 vs. ExPASy TrEMBL
Match: A0A6J1DDR0 (uncharacterized protein LOC111020109 OS=Momordica charantia OX=3673 GN=LOC111020109 PE=4 SV=1)

HSP 1 Score: 167.2 bits (422), Expect = 6.0e-38
Identity = 96/189 (50.79%), Postives = 104/189 (55.03%), Query Frame = 0


Query: 1   MELGSKNLFSLAPPVFDGENYQAWPIRIQAYMEGCDYWEAIEQDFEIAPLPNNPRIMHQI 60
           MELGS NL SLAPPVFDGENYQAW IRIQAYMEGC+YWEAIEQD+EIAPLP+NP  MHQI
Sbjct: 1   MELGSNNLSSLAPPVFDGENYQAWAIRIQAYMEGCNYWEAIEQDYEIAPLPDNP-TMHQI 60

Query: 61  KTHKKRVIRKAKARACLYA----------------------------------------- 117
           KTHK+RV RKAKARACLYA                                         
Sbjct: 61  KTHKERVTRKAKARACLYAAVSPAIFNRIMALKSAKEIWEFLKSEYEGDERIKGMKVLNL 120

[Close]

BLAST of Moc11g28910 vs. ExPASy TrEMBL
Match: A0A5D3CLK8 (Kinesin-like protein KIN-7K OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold302G00780 PE=4 SV=1)

HSP 1 Score: 163.3 bits (412), Expect = 8.6e-37
Identity = 87/154 (56.49%), Postives = 99/154 (64.29%), Query Frame = 0


Query: 1   MELGSKNLFSLAPPVFDGENYQAWPIRIQAYMEGCDYWEAIEQDFEIAPLPNNPRIMHQI 60
           MELG  N  SLAPP+FDGENYQAW IR+QAYMEGCDYWEAIE+ +EIAP  +NP   +QI
Sbjct: 1   MELGLNNSTSLAPPMFDGENYQAWTIRMQAYMEGCDYWEAIEEGYEIAPFLDNP-TSNQI 60

Query: 61  KTHKKRVIRKAKARACLYA-------------------------------------GIDL 118
           KTHK+R+IRKAK RACLYA                                     G DL
Sbjct: 61  KTHKERIIRKAKTRACLYAAMSPSIFNRLMALESAKDICEFLKNKLIEIANKAKALGTDL 120

[Close]

BLAST of Moc11g28910 vs. ExPASy TrEMBL
Match: A0A6P8DG56 (uncharacterized protein LOC116204427 OS=Punica granatum OX=22663 GN=LOC116204427 PE=4 SV=1)

HSP 1 Score: 154.1 bits (388), Expect = 5.2e-34
Identity = 86/190 (45.26%), Postives = 102/190 (53.68%), Query Frame = 0


Query: 1   MELGSKNLFSLAPPVFDGENYQAWPIRIQAYMEGCDYWEAIEQDFEIAPLPNNPRIMHQI 60
           ME GS  + +LAPPVFDGENY AW +R+QAYMEGCD+WEA+EQD+E+APLPNNP I +QI
Sbjct: 1   MESGSSTMSALAPPVFDGENYHAWAVRMQAYMEGCDFWEAVEQDYEVAPLPNNPTI-NQI 60

Query: 61  KTHKKRVIRKAKARACLYA----------------------------------------- 118
           K HK+RV +KAKA+ACLYA                                         
Sbjct: 61  KIHKERVTKKAKAKACLYAAVSPAIFTRIMVLGSAKEIWDFLEVEYRGNERIKGMKVLNL 120

The following BLAST results are available for this feature:

BLAST of Moc11g28910 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022151329.1	4.1e-41	47.46	uncharacterized protein LOC111019291 [Momordica charantia]	[more]
XP_022158688.1	6.5e-39	51.58	uncharacterized protein LOC111025149 [Momordica charantia]	[more]
XP_022152365.1	1.2e-37	50.79	uncharacterized protein LOC111020109 [Momordica charantia]	[more]
TYK12310.1	1.8e-36	56.49	kinesin-like protein KIN-7K [Cucumis melo var. makuwa]	[more]
XP_031392356.1	1.1e-33	45.26	uncharacterized protein LOC116204427 [Punica granatum]	[more]

BLAST of Moc11g28910 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Moc11g28910 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DCR7	2.0e-41	47.46	uncharacterized protein LOC111019291 OS=Momordica charantia OX=3673 GN=LOC111019...	[more]
A0A6J1DWT9	3.2e-39	51.58	uncharacterized protein LOC111025149 OS=Momordica charantia OX=3673 GN=LOC111025...	[more]
A0A6J1DDR0	6.0e-38	50.79	uncharacterized protein LOC111020109 OS=Momordica charantia OX=3673 GN=LOC111020...	[more]
A0A5D3CLK8	8.6e-37	56.49	Kinesin-like protein KIN-7K OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaf...	[more]
A0A6P8DG56	5.2e-34	45.26	uncharacterized protein LOC116204427 OS=Punica granatum OX=22663 GN=LOC116204427...	[more]

BLAST of Moc11g28910 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (OHB3-1) v2
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR025314	Domain of unknown function DUF4219	PFAM	PF13961	DUF4219	coord: 16..42 e-value: 5.6E-7 score: 29.2
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 125..144
None	No IPR available	PANTHER	PTHR35317:SF11	SUBFAMILY NOT NAMED	coord: 2..79 coord: 80..117
None	No IPR available	PANTHER	PTHR35317	OS04G0629600 PROTEIN	coord: 2..79 coord: 80..117

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Moc11g28910.1	Moc11g28910.1	mRNA